FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8373, 171 aa
  1>>>pF1KB8373 171 - 171 aa - 171 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.0572+/-0.000792; mu= 12.8944+/- 0.047
 mean_var=52.6724+/-10.461, 0's: 0 Z-trim(106.5): 14  B-trim: 138 in 1/51
 Lambda= 0.176719
 statistics sampled from 9020 (9029) to 9020 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.679), E-opt: 0.2 (0.277), width:  16
 Scan time:  1.520

The best scores are:                                      opt bits E(32554)
CCDS14207.1 SAT1 gene_id:6303|Hs108|chrX           ( 171) 1172 306.4 5.5e-84
CCDS11116.1 SAT2 gene_id:112483|Hs108|chr17        ( 170)  544 146.3 8.7e-36
CCDS35343.2 SATL1 gene_id:340562|Hs108|chrX        ( 632)  379 104.4 1.3e-22
CCDS82055.1 SAT2 gene_id:112483|Hs108|chr17        ( 136)  238 68.2 2.2e-12


>>CCDS14207.1 SAT1 gene_id:6303|Hs108|chrX                (171 aa)
 initn: 1172 init1: 1172 opt: 1172  Z-score: 1621.3  bits: 306.4 E(32554): 5.5e-84
Smith-Waterman score: 1172; 100.0% identity (100.0% similar) in 171 aa overlap (1-171:1-171)

               10        20        30        40        50        60
pF1KB8 MAKFVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFYHCLVAEVP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MAKFVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFYHCLVAEVP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 KEHWTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 KEHWTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRC
               70        80        90       100       110       120

              130       140       150       160       170 
pF1KB8 RCSSMHFLVAEWNEPSINFYKRRGASDLSSEEGWRLFKIDKEYLLKMATEE
       :::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 RCSSMHFLVAEWNEPSINFYKRRGASDLSSEEGWRLFKIDKEYLLKMATEE
              130       140       150       160       170 

>>CCDS11116.1 SAT2 gene_id:112483|Hs108|chr17             (170 aa)
 initn: 550 init1: 535 opt: 544  Z-score: 756.0  bits: 146.3 E(32554): 8.7e-36
Smith-Waterman score: 544; 46.4% identity (75.0% similar) in 168 aa overlap (1-168:1-168)

               10        20        30        40        50        60
pF1KB8 MAKFVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFYHCLVAEVP
       ::.  :: :  .::.::::::.:::..: . .:: ..:. :  ::::..:::::::::. 
CCDS11 MASVRIREAKEGDCGDILRLIRELAEFEKLSDQVKISEEALRADGFGDNPFYHCLVAEIL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 KEHWTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRC
              :  .::...::: :. : :. .::::..:: .::: ::::.:.:....::.  
CCDS11 PAPGKLLGPCVVGYGIYYFIYSTWKGRTIYLEDIYVMPEYRGQGIGSKIIKKVAEVALDK
               70        80        90       100       110       120

              130       140       150       160       170 
pF1KB8 RCSSMHFLVAEWNEPSINFYKRRGASDLSSEEGWRLFKIDKEYLLKMATEE
        ::.... : .::. ....::  ::.::.  :::..: .. :   :.:   
CCDS11 GCSQFRLAVLDWNQRAMDLYKALGAQDLTEAEGWHFFCFQGEATRKLAGK 
              130       140       150       160       170 

>>CCDS35343.2 SATL1 gene_id:340562|Hs108|chrX             (632 aa)
 initn: 363 init1: 216 opt: 379  Z-score: 519.5  bits: 104.4 E(32554): 1.3e-22
Smith-Waterman score: 379; 57.4% identity (76.2% similar) in 101 aa overlap (1-101:526-625)

                                             10        20        30
pF1KB8                               MAKFVIRPATAADCSDILRLIKELAKYEYM
                                     :  : :: : :.:: .:::::::::  : :
CCDS35 LNQLVLSQPGLSQPGRSQPSVSQMGMRQTSMDYFQIRHAEAGDCPEILRLIKELAACENM
         500       510       520       530       540       550     

               40        50        60        70        80        90
pF1KB8 EEQVILTEKDLLEDGFGEHPFYHCLVAEVPKEHWTPEGHSIVGFAMYYFTYDPWIGKLLY
        . . ::  :::.::::..:...::.::: ...  : :.  ::::::::::: : ::.::
CCDS35 LDAMELTAADLLRDGFGDNPLFYCLIAEV-NDQQKPSGKLTVGFAMYYFTYDSWTGKVLY
         560       570       580        590       600       610    

              100       110       120       130       140       150
pF1KB8 LEDFFVMSDYRGFGIGSEILKNLSQVAMRCRCSSMHFLVAEWNEPSINFYKRRGASDLSS
       ::::.: . :.                                                 
CCDS35 LEDFYVTQAYQDSHHNSM                                          
          620       630                                            

>>CCDS82055.1 SAT2 gene_id:112483|Hs108|chr17             (136 aa)
 initn: 395 init1: 238 opt: 238  Z-score: 335.9  bits: 68.2 E(32554): 2.2e-12
Smith-Waterman score: 358; 39.3% identity (61.9% similar) in 168 aa overlap (1-168:1-134)

               10        20        30        40        50        60
pF1KB8 MAKFVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFYHCLVAEVP
       ::.  :: :  .::.::::::.:::..: . .:: ..:. :  ::::..:::::::::. 
CCDS82 MASVRIREAKEGDCGDILRLIRELAEFEKLSDQVKISEEALRADGFGDNPFYHCLVAEIL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 KEHWTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRC
                             :  ::::            : ::::.:.:....::.  
CCDS82 ----------------------PAPGKLL------------GQGIGSKIIKKVAEVALDK
                                                 70        80      

              130       140       150       160       170 
pF1KB8 RCSSMHFLVAEWNEPSINFYKRRGASDLSSEEGWRLFKIDKEYLLKMATEE
        ::.... : .::. ....::  ::.::.  :::..: .. :   :.:   
CCDS82 GCSQFRLAVLDWNQRAMDLYKALGAQDLTEAEGWHFFCFQGEATRKLAGK 
         90       100       110       120       130       




171 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 12:20:47 2016 done: Fri Nov  4 12:20:47 2016
 Total Scan time:  1.520 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]