Result of FASTA (omim) for
pF1KB8373
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8373, 171 aa
1>>>pF1KB8373 171 - 171 aa - 171 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0715+/-0.000351; mu= 12.9916+/- 0.022
mean_var=54.5070+/-10.855, 0's: 0 Z-trim(113.1): 32 B-trim: 0 in 0/55
Lambda= 0.173719
statistics sampled from 22318 (22343) to 22318 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.664), E-opt: 0.2 (0.262), width: 16
Scan time: 4.430
The best scores are: opt bits E(85289)
NP_002961 (OMIM: 308800,313020) diamine acetyltran ( 171) 1172 301.5 4.2e-82
XP_016885209 (OMIM: 308800,313020) PREDICTED: diam ( 206) 715 187.0 1.5e-47
NP_597998 (OMIM: 611463) diamine acetyltransferase ( 170) 544 144.1 1e-34
NP_001307774 (OMIM: 611463) diamine acetyltransfer ( 249) 463 123.9 1.8e-28
XP_016879562 (OMIM: 611463) PREDICTED: diamine ace ( 205) 332 91.0 1.2e-18
NP_001307776 (OMIM: 611463) diamine acetyltransfer ( 136) 238 67.4 1e-11
NP_001307775 (OMIM: 611463) diamine acetyltransfer ( 215) 184 54.0 1.8e-07
XP_016879563 (OMIM: 611463) PREDICTED: diamine ace ( 171) 157 47.2 1.6e-05
>>NP_002961 (OMIM: 308800,313020) diamine acetyltransfer (171 aa)
initn: 1172 init1: 1172 opt: 1172 Z-score: 1595.0 bits: 301.5 E(85289): 4.2e-82
Smith-Waterman score: 1172; 100.0% identity (100.0% similar) in 171 aa overlap (1-171:1-171)
10 20 30 40 50 60
pF1KB8 MAKFVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFYHCLVAEVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MAKFVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFYHCLVAEVP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KEHWTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 KEHWTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRC
70 80 90 100 110 120
130 140 150 160 170
pF1KB8 RCSSMHFLVAEWNEPSINFYKRRGASDLSSEEGWRLFKIDKEYLLKMATEE
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 RCSSMHFLVAEWNEPSINFYKRRGASDLSSEEGWRLFKIDKEYLLKMATEE
130 140 150 160 170
>>XP_016885209 (OMIM: 308800,313020) PREDICTED: diamine (206 aa)
initn: 715 init1: 715 opt: 715 Z-score: 974.7 bits: 187.0 E(85289): 1.5e-47
Smith-Waterman score: 715; 100.0% identity (100.0% similar) in 104 aa overlap (68-171:103-206)
40 50 60 70 80 90
pF1KB8 EKDLLEDGFGEHPFYHCLVAEVPKEHWTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVM
::::::::::::::::::::::::::::::
XP_016 FKTYDRPLILQLQLLWNVFLLHISCDALITGHSIVGFAMYYFTYDPWIGKLLYLEDFFVM
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB8 SDYRGFGIGSEILKNLSQVAMRCRCSSMHFLVAEWNEPSINFYKRRGASDLSSEEGWRLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SDYRGFGIGSEILKNLSQVAMRCRCSSMHFLVAEWNEPSINFYKRRGASDLSSEEGWRLF
140 150 160 170 180 190
160 170
pF1KB8 KIDKEYLLKMATEE
::::::::::::::
XP_016 KIDKEYLLKMATEE
200
>>NP_597998 (OMIM: 611463) diamine acetyltransferase 2 i (170 aa)
initn: 550 init1: 535 opt: 544 Z-score: 744.4 bits: 144.1 E(85289): 1e-34
Smith-Waterman score: 544; 46.4% identity (75.0% similar) in 168 aa overlap (1-168:1-168)
10 20 30 40 50 60
pF1KB8 MAKFVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFYHCLVAEVP
::. :: : .::.::::::.:::..: . .:: ..:. : ::::..:::::::::.
NP_597 MASVRIREAKEGDCGDILRLIRELAEFEKLSDQVKISEEALRADGFGDNPFYHCLVAEIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KEHWTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRC
: .::...::: :. : :. .::::..:: .::: ::::.:.:....::.
NP_597 PAPGKLLGPCVVGYGIYYFIYSTWKGRTIYLEDIYVMPEYRGQGIGSKIIKKVAEVALDK
70 80 90 100 110 120
130 140 150 160 170
pF1KB8 RCSSMHFLVAEWNEPSINFYKRRGASDLSSEEGWRLFKIDKEYLLKMATEE
::.... : .::. ....:: ::.::. :::..: .. : :.:
NP_597 GCSQFRLAVLDWNQRAMDLYKALGAQDLTEAEGWHFFCFQGEATRKLAGK
130 140 150 160 170
>>NP_001307774 (OMIM: 611463) diamine acetyltransferase (249 aa)
initn: 469 init1: 454 opt: 463 Z-score: 632.1 bits: 123.9 E(85289): 1.8e-28
Smith-Waterman score: 463; 44.5% identity (74.7% similar) in 146 aa overlap (23-168:102-247)
10 20 30 40 50
pF1KB8 MAKFVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFY
:::..: . .:: ..:. : ::::..:::
NP_001 DPDGFRADPRGQGGRLWRYPEADSGEDCRPELAEFEKLSDQVKISEEALRADGFGDNPFY
80 90 100 110 120 130
60 70 80 90 100 110
pF1KB8 HCLVAEVPKEHWTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKN
::::::. : .::...::: :. : :. .::::..:: .::: ::::.:.:.
NP_001 HCLVAEILPAPGKLLGPCVVGYGIYYFIYSTWKGRTIYLEDIYVMPEYRGQGIGSKIIKK
140 150 160 170 180 190
120 130 140 150 160 170
pF1KB8 LSQVAMRCRCSSMHFLVAEWNEPSINFYKRRGASDLSSEEGWRLFKIDKEYLLKMATEE
...::. ::.... : .::. ....:: ::.::. :::..: .. : :.:
NP_001 VAEVALDKGCSQFRLAVLDWNQRAMDLYKALGAQDLTEAEGWHFFCFQGEATRKLAGK
200 210 220 230 240
>>XP_016879562 (OMIM: 611463) PREDICTED: diamine acetylt (205 aa)
initn: 332 init1: 332 opt: 332 Z-score: 456.0 bits: 91.0 E(85289): 1.2e-18
Smith-Waterman score: 332; 48.9% identity (76.6% similar) in 94 aa overlap (23-116:102-195)
10 20 30 40 50
pF1KB8 MAKFVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFY
:::..: . .:: ..:. : ::::..:::
XP_016 DPDGFRADPRGQGGRLWRYPEADSGEDCRPELAEFEKLSDQVKISEEALRADGFGDNPFY
80 90 100 110 120 130
60 70 80 90 100 110
pF1KB8 HCLVAEVPKEHWTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKN
::::::. : .::...::: :. : :. .::::..:: .::: ::::.:.:.
XP_016 HCLVAEILPAPGKLLGPCVVGYGIYYFIYSTWKGRTIYLEDIYVMPEYRGQGIGSKIIKK
140 150 160 170 180 190
120 130 140 150 160 170
pF1KB8 LSQVAMRCRCSSMHFLVAEWNEPSINFYKRRGASDLSSEEGWRLFKIDKEYLLKMATEE
...:
XP_016 VAEVRRWVGRQVRT
200
>>NP_001307776 (OMIM: 611463) diamine acetyltransferase (136 aa)
initn: 395 init1: 238 opt: 238 Z-score: 331.5 bits: 67.4 E(85289): 1e-11
Smith-Waterman score: 358; 39.3% identity (61.9% similar) in 168 aa overlap (1-168:1-134)
10 20 30 40 50 60
pF1KB8 MAKFVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFYHCLVAEVP
::. :: : .::.::::::.:::..: . .:: ..:. : ::::..:::::::::.
NP_001 MASVRIREAKEGDCGDILRLIRELAEFEKLSDQVKISEEALRADGFGDNPFYHCLVAEIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KEHWTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRC
: :::: : ::::.:.:....::.
NP_001 ----------------------PAPGKLL------------GQGIGSKIIKKVAEVALDK
70 80
130 140 150 160 170
pF1KB8 RCSSMHFLVAEWNEPSINFYKRRGASDLSSEEGWRLFKIDKEYLLKMATEE
::.... : .::. ....:: ::.::. :::..: .. : :.:
NP_001 GCSQFRLAVLDWNQRAMDLYKALGAQDLTEAEGWHFFCFQGEATRKLAGK
90 100 110 120 130
>>NP_001307775 (OMIM: 611463) diamine acetyltransferase (215 aa)
initn: 314 init1: 171 opt: 184 Z-score: 255.2 bits: 54.0 E(85289): 1.8e-07
Smith-Waterman score: 277; 36.3% identity (59.6% similar) in 146 aa overlap (23-168:102-213)
10 20 30 40 50
pF1KB8 MAKFVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFY
:::..: . .:: ..:. : ::::..:::
NP_001 DPDGFRADPRGQGGRLWRYPEADSGEDCRPELAEFEKLSDQVKISEEALRADGFGDNPFY
80 90 100 110 120 130
60 70 80 90 100 110
pF1KB8 HCLVAEVPKEHWTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKN
::::::. : :::: : ::::.:.:.
NP_001 HCLVAEIL----------------------PAPGKLL------------GQGIGSKIIKK
140 150
120 130 140 150 160 170
pF1KB8 LSQVAMRCRCSSMHFLVAEWNEPSINFYKRRGASDLSSEEGWRLFKIDKEYLLKMATEE
...::. ::.... : .::. ....:: ::.::. :::..: .. : :.:
NP_001 VAEVALDKGCSQFRLAVLDWNQRAMDLYKALGAQDLTEAEGWHFFCFQGEATRKLAGK
160 170 180 190 200 210
>>XP_016879563 (OMIM: 611463) PREDICTED: diamine acetylt (171 aa)
initn: 192 init1: 157 opt: 157 Z-score: 220.2 bits: 47.2 E(85289): 1.6e-05
Smith-Waterman score: 157; 56.8% identity (83.8% similar) in 37 aa overlap (23-59:102-138)
10 20 30 40 50
pF1KB8 MAKFVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFY
:::..: . .:: ..:. : ::::..:::
XP_016 DPDGFRADPRGQGGRLWRYPEADSGEDCRPELAEFEKLSDQVKISEEALRADGFGDNPFY
80 90 100 110 120 130
60 70 80 90 100 110
pF1KB8 HCLVAEVPKEHWTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKN
::::::.
XP_016 HCLVAEILPAPGKLLGQGIGSKIIKKVAEVRRWVGRQVRT
140 150 160 170
171 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 12:20:47 2016 done: Fri Nov 4 12:20:48 2016
Total Scan time: 4.430 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]