Result of FASTA (omim) for
pF1KB8381
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8381, 502 aa
1>>>pF1KB8381 502 - 502 aa - 502 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.5043+/-0.000324; mu= 8.8077+/- 0.020
mean_var=136.5611+/-28.021, 0's: 0 Z-trim(119.4): 28 B-trim: 812 in 1/56
Lambda= 0.109752
statistics sampled from 33374 (33402) to 33374 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.731), E-opt: 0.2 (0.392), width: 16
Scan time: 10.250
The best scores are: opt bits E(85289)
NP_005644 (OMIM: 189889) alpha-globin transcriptio ( 502) 3395 548.9 1.2e-155
NP_001166923 (OMIM: 189889) alpha-globin transcrip ( 501) 3378 546.2 8.1e-155
NP_001121632 (OMIM: 609784) upstream-binding prote ( 504) 2517 409.9 8.9e-114
NP_055368 (OMIM: 609785) transcription factor CP2- ( 479) 2414 393.6 6.9e-109
XP_016859391 (OMIM: 609785) PREDICTED: transcripti ( 406) 2046 335.3 2.1e-91
NP_001166924 (OMIM: 189889) alpha-globin transcrip ( 450) 1782 293.5 8.7e-79
NP_001121633 (OMIM: 609784) upstream-binding prote ( 540) 1674 276.4 1.4e-73
NP_055332 (OMIM: 609784) upstream-binding protein ( 540) 1674 276.4 1.4e-73
XP_016859393 (OMIM: 609785) PREDICTED: transcripti ( 273) 1420 236.0 1e-61
XP_016859394 (OMIM: 609785) PREDICTED: transcripti ( 273) 1408 234.1 3.9e-61
XP_016859392 (OMIM: 609785) PREDICTED: transcripti ( 274) 1011 171.3 3.2e-42
XP_005246216 (OMIM: 609786) PREDICTED: grainyhead- ( 429) 356 67.7 7.8e-11
XP_016859390 (OMIM: 609786) PREDICTED: grainyhead- ( 467) 354 67.4 1e-10
NP_937825 (OMIM: 609786) grainyhead-like protein 1 ( 618) 354 67.4 1.3e-10
XP_006711947 (OMIM: 609786) PREDICTED: grainyhead- ( 441) 346 66.1 2.4e-10
XP_016859389 (OMIM: 609786) PREDICTED: grainyhead- ( 479) 344 65.8 3.2e-10
XP_011508645 (OMIM: 609786) PREDICTED: grainyhead- ( 583) 344 65.9 3.8e-10
XP_006711945 (OMIM: 609786) PREDICTED: grainyhead- ( 630) 344 65.9 4e-10
XP_011540172 (OMIM: 606713,608317) PREDICTED: grai ( 509) 339 65.0 5.8e-10
NP_001181939 (OMIM: 606713,608317) grainyhead-like ( 556) 339 65.0 6.2e-10
XP_011540171 (OMIM: 606713,608317) PREDICTED: grai ( 556) 339 65.0 6.2e-10
NP_937816 (OMIM: 606713,608317) grainyhead-like pr ( 602) 339 65.1 6.7e-10
NP_067003 (OMIM: 606713,608317) grainyhead-like pr ( 607) 339 65.1 6.7e-10
NP_937817 (OMIM: 606713,608317) grainyhead-like pr ( 626) 339 65.1 6.9e-10
XP_011515609 (OMIM: 608576,608641,616029) PREDICTE ( 591) 336 64.6 9.1e-10
XP_011515608 (OMIM: 608576,608641,616029) PREDICTE ( 609) 336 64.6 9.4e-10
NP_001317522 (OMIM: 608576,608641,616029) grainyhe ( 609) 336 64.6 9.4e-10
NP_079191 (OMIM: 608576,608641,616029) grainyhead- ( 625) 336 64.6 9.6e-10
>>NP_005644 (OMIM: 189889) alpha-globin transcription fa (502 aa)
initn: 3395 init1: 3395 opt: 3395 Z-score: 2915.0 bits: 548.9 E(85289): 1.2e-155
Smith-Waterman score: 3395; 100.0% identity (100.0% similar) in 502 aa overlap (1-502:1-502)
10 20 30 40 50 60
pF1KB8 MAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSMSDVLALPIFKQEESSLPPDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSMSDVLALPIFKQEESSLPPDN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 ENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKLGELPEINGKLVKSIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKLGELPEINGKLVKSIF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 RVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGIIDPRANPTQLNTVEFLWDPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGIIDPRANPTQLNTVEFLWDPA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 KRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENENGEYTEHLHSASCQIKVFKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENENGEYTEHLHSASCQIKVFKP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 KGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPWPEITYVNNSPSPGFNSSHSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPWPEITYVNNSPSPGFNSSHSS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 FSLGEGNGSPNHQPEPPPPVTDNLLPTTTPQEAQQWLHRNRFSTFTRLFTNFSGADLLKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 FSLGEGNGSPNHQPEPPPPVTDNLLPTTTPQEAQQWLHRNRFSTFTRLFTNFSGADLLKL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 TRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQLREQQQQQQQQQQKHEDGDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 TRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQLREQQQQQQQQQQKHEDGDS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 NGTFFVYHAIYLEELTAVELTEKIAQLFSISPCQISQIYKQGPTGIHVLISDEMIQNFQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 NGTFFVYHAIYLEELTAVELTEKIAQLFSISPCQISQIYKQGPTGIHVLISDEMIQNFQE
430 440 450 460 470 480
490 500
pF1KB8 EACFILDTMKAETNDSYHIILK
::::::::::::::::::::::
NP_005 EACFILDTMKAETNDSYHIILK
490 500
>>NP_001166923 (OMIM: 189889) alpha-globin transcription (501 aa)
initn: 3601 init1: 3323 opt: 3378 Z-score: 2900.5 bits: 546.2 E(85289): 8.1e-155
Smith-Waterman score: 3378; 99.8% identity (99.8% similar) in 502 aa overlap (1-502:1-501)
10 20 30 40 50 60
pF1KB8 MAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSMSDVLALPIFKQEESSLPPDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSMSDVLALPIFKQEESSLPPDN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 ENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKLGELPEINGKLVKSIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKLGELPEINGKLVKSIF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 RVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGIIDPRANPTQLNTVEFLWDPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGIIDPRANPTQLNTVEFLWDPA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 KRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENENGEYTEHLHSASCQIKVFKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENENGEYTEHLHSASCQIKVFKP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 KGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPWPEITYVNNSPSPGFNSSHSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPWPEITYVNNSPSPGFNSSHSS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 FSLGEGNGSPNHQPEPPPPVTDNLLPTTTPQEAQQWLHRNRFSTFTRLFTNFSGADLLKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FSLGEGNGSPNHQPEPPPPVTDNLLPTTTPQEAQQWLHRNRFSTFTRLFTNFSGADLLKL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 TRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQLREQQQQQQQQQQKHEDGDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQLREQQQQQQQQQQKHEDGDS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 NGTFFVYHAIYLEELTAVELTEKIAQLFSISPCQISQIYKQGPTGIHVLISDEMIQNFQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NGTFFVYHAIYLEELTAVELTEKIAQLFSISPCQISQIYKQGPTGIHVLISDEMIQNFQE
430 440 450 460 470 480
490 500
pF1KB8 EACFILDTMKAETNDSYHIILK
:::::::::: :::::::::::
NP_001 EACFILDTMK-ETNDSYHIILK
490 500
>>NP_001121632 (OMIM: 609784) upstream-binding protein 1 (504 aa)
initn: 2124 init1: 1693 opt: 2517 Z-score: 2163.7 bits: 409.9 E(85289): 8.9e-114
Smith-Waterman score: 2517; 73.3% identity (90.4% similar) in 509 aa overlap (1-502:1-504)
10 20 30 40 50 60
pF1KB8 MAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSMSDVLALPIFKQEESSLPPDN
:::.::. :::::::::.::::::::::::::::::::::::::::::::.:::: :.
NP_001 MAWVLKM---DEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDG
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 ENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKLGELPEINGKLVKSIF
:.. :::::.:::::::::::::::::::::::::::::::::.:..:::::::::::.
NP_001 ETEHPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSII
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB8 RVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGIIDPRANPTQLNTVEFLWDPA
::::::::::::::::::::.:::::::.::.:::::::::: :.::.:::.::::::::
NP_001 RVVFHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPA
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB8 KRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENENGEYTEHLHSASCQIKVFKP
::::.:::::::::::: ::::::::::::.:.::::.:::::::.::::::::::::::
NP_001 KRTSAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKP
180 190 200 210 220 230
250 260 270 280 290
pF1KB8 KGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPWPEI--TYVNNSPSPG--FNS
:::::::::::::::::: ::::::::::.:::::::::::. .::::::::. :.:
NP_001 KGADRKQKTDREKMEKRTAHEKEKYQPSYDTTILTECSPWPDAPTAYVNNSPSPAPTFTS
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB8 -SHSSFSLGEGNGS-PNHQPEPPPPVT-DNLLPTTTPQEAQQWLHRNRFSTFTRLFTNFS
..:. :. ..:.: :::: . .. ... :..: ::.:::: .::::..::::.:::
NP_001 PQQSTCSVPDSNSSSPNHQGDGASQTSGEQIQPSATIQETQQWLLKNRFSSYTRLFSNFS
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB8 GADLLKLTRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQLREQQQQQQQQQQ
::::::::..:..:::: ::::::.:.::.: ::::::::::.:. . : ::: ..
NP_001 GADLLKLTKEDLVQICGAADGIRLYNSLKSRSVRPRLTIYVCREQPSSTVLQGQQQAASS
360 370 380 390 400 410
420 430 440 450 460 470
pF1KB8 KHEDGDSNGTFFVYHAIYLEELTAVELTEKIAQLFSISPCQISQIYKQGPTGIHVLISDE
:.: .:. .:::::::::. : :...:.: .:.: ::.:.:.:::::::.:.::.
NP_001 ASENG--SGAPYVYHAIYLEEMIASEVARKLALVFNIPLHQINQVYRQGPTGIHILVSDQ
420 430 440 450 460 470
480 490 500
pF1KB8 MIQNFQEEACFILDTMKAETNDSYHIILK
:.::::.:.::...:.:::..:. :::::
NP_001 MVQNFQDESCFLFSTVKAESSDGIHIILK
480 490 500
>>NP_055368 (OMIM: 609785) transcription factor CP2-like (479 aa)
initn: 2065 init1: 1475 opt: 2414 Z-score: 2075.9 bits: 393.6 E(85289): 6.9e-109
Smith-Waterman score: 2414; 74.6% identity (91.5% similar) in 469 aa overlap (35-502:16-476)
10 20 30 40 50 60
pF1KB8 LKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSMSDVLALPIFKQEESSLPPDNENKI
.:.: . :::::::::::: .: :.:: ..
NP_055 MLFWHTQPEHYNQHNSGSY-LRDVLALPIFKQEEPQLSPENEARL
10 20 30 40
70 80 90 100 110 120
pF1KB8 LPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKLGELPEINGKLVKSIFRVVF
:.:::::::::::::::.:::::::::::::::.:.:::::.. ..: : ::::.::::
NP_055 PPLQYVLCAATSPAVKLHEETLTYLNQGQSYEIRLLENRKLGDFQDLNTKYVKSIIRVVF
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB8 HDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGIIDPRANPTQLNTVEFLWDPAKRTS
::::::::::::::::::.::::::::::::.::::.::::.:::::.::::::::::.:
NP_055 HDRRLQYTEHQQLEGWRWSRPGDRILDIDIPLSVGILDPRASPTQLNAVEFLWDPAKRAS
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB8 VFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENENGEYTEHLHSASCQIKVFKPKGAD
.:::::::::::: :::::::::::::::::::.::::::::::::::::::::::::::
NP_055 AFIQVHCISTEFTPRKHGGEKGVPFRVQIDTFKQNENGEYTEHLHSASCQIKVFKPKGAD
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB8 RKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPWPEITY-VNNSPSPGFNSSHSSFSL
:::::::::::::: .:::::::::::::::::::::...: ::..:::..:.: .::.:
NP_055 RKQKTDREKMEKRTAQEKEKYQPSYETTILTECSPWPDVAYQVNSAPSPSYNGSPNSFGL
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB8 GEGNGSPNHQPEPPPPVTDNLLPTTTPQEAQQWLHRNRFSTFTRLFTNFSGADLLKLTRD
::::.::.: : : .:.:::... :.::::::::::: : :::..::::::::..::
NP_055 GEGNASPTHPVEALPVGSDHLLPSASIQDAQQWLHRNRFSQFCRLFASFSGADLLKMSRD
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB8 DVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQLREQQQQQQQQQQKHEDGDSNGT
:..::::::::::::::.::: :::..::::::: .:.. ::.. .::::
NP_055 DLVQICGPADGIRLFNAIKGRNVRPKMTIYVCQEL-----EQNRVPLQQKRDGSGDSN--
350 360 370 380 390
430 440 450 460 470 480
pF1KB8 FFVYHAIYLEELTAVELTEKIAQLFSISPCQISQIYKQGPTGIHVLISDEMIQNFQEEAC
. :::::.:::::..:: ::::.:.:::: .: ..:.::::::::..:.::.::::.:.:
NP_055 LSVYHAIFLEELTTLELIEKIANLYSISPQHIHRVYRQGPTGIHVVVSNEMVQNFQDESC
400 410 420 430 440 450
490 500
pF1KB8 FILDTMKAETNDSYHIILK
:.:.:.:::.::.::::::
NP_055 FVLSTIKAESNDGYHIILKCGL
460 470
>>XP_016859391 (OMIM: 609785) PREDICTED: transcription f (406 aa)
initn: 2035 init1: 1475 opt: 2046 Z-score: 1762.0 bits: 335.3 E(85289): 2.1e-91
Smith-Waterman score: 2046; 76.3% identity (91.2% similar) in 388 aa overlap (35-421:16-397)
10 20 30 40 50 60
pF1KB8 LKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSMSDVLALPIFKQEESSLPPDNENKI
.:.: . :::::::::::: .: :.:: ..
XP_016 MLFWHTQPEHYNQHNSGSY-LRDVLALPIFKQEEPQLSPENEARL
10 20 30 40
70 80 90 100 110 120
pF1KB8 LPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKLGELPEINGKLVKSIFRVVF
:.:::::::::::::::.:::::::::::::::.:.:::::.. ..: : ::::.::::
XP_016 PPLQYVLCAATSPAVKLHEETLTYLNQGQSYEIRLLENRKLGDFQDLNTKYVKSIIRVVF
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB8 HDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGIIDPRANPTQLNTVEFLWDPAKRTS
::::::::::::::::::.::::::::::::.::::.::::.:::::.::::::::::.:
XP_016 HDRRLQYTEHQQLEGWRWSRPGDRILDIDIPLSVGILDPRASPTQLNAVEFLWDPAKRAS
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB8 VFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENENGEYTEHLHSASCQIKVFKPKGAD
.:::::::::::: :::::::::::::::::::.::::::::::::::::::::::::::
XP_016 AFIQVHCISTEFTPRKHGGEKGVPFRVQIDTFKQNENGEYTEHLHSASCQIKVFKPKGAD
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB8 RKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPWPEITY-VNNSPSPGFNSSHSSFSL
:::::::::::::: .:::::::::::::::::::::...: ::..:::..:.: .::.:
XP_016 RKQKTDREKMEKRTAQEKEKYQPSYETTILTECSPWPDVAYQVNSAPSPSYNGSPNSFGL
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB8 GEGNGSPNHQPEPPPPVTDNLLPTTTPQEAQQWLHRNRFSTFTRLFTNFSGADLLKLTRD
::::.::.: : : .:.:::... :.::::::::::: : :::..::::::::..::
XP_016 GEGNASPTHPVEALPVGSDHLLPSASIQDAQQWLHRNRFSQFCRLFASFSGADLLKMSRD
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB8 DVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQLREQQQQQQQQQQKHEDGDSNGT
:..::::::::::::::.::: :::..::::::: .:.. ::.. .::::
XP_016 DLVQICGPADGIRLFNAIKGRNVRPKMTIYVCQE-----LEQNRVPLQQKRDGSGDSNLS
350 360 370 380 390
430 440 450 460 470 480
pF1KB8 FFVYHAIYLEELTAVELTEKIAQLFSISPCQISQIYKQGPTGIHVLISDEMIQNFQEEAC
XP_016 DGAELPR
400
>>NP_001166924 (OMIM: 189889) alpha-globin transcription (450 aa)
initn: 3196 init1: 1714 opt: 1782 Z-score: 1535.5 bits: 293.5 E(85289): 8.7e-79
Smith-Waterman score: 2915; 89.6% identity (89.6% similar) in 502 aa overlap (1-502:1-450)
10 20 30 40 50 60
pF1KB8 MAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSMSDVLALPIFKQEESSLPPDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSMSDVLALPIFKQEESSLPPDN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 ENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKLGELPEINGKLVKSIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKLGELPEINGKLVKSIF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 RVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGIIDPRANPTQLNTVEFLWDPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGIIDPRANPTQLNTVEFLWDPA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 KRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENENGEYTEHLHSASCQIKVFKP
:::::::: :
NP_001 KRTSVFIQ---------------------------------------------------P
250 260 270 280 290 300
pF1KB8 KGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPWPEITYVNNSPSPGFNSSHSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPWPEITYVNNSPSPGFNSSHSS
190 200 210 220 230 240
310 320 330 340 350 360
pF1KB8 FSLGEGNGSPNHQPEPPPPVTDNLLPTTTPQEAQQWLHRNRFSTFTRLFTNFSGADLLKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FSLGEGNGSPNHQPEPPPPVTDNLLPTTTPQEAQQWLHRNRFSTFTRLFTNFSGADLLKL
250 260 270 280 290 300
370 380 390 400 410 420
pF1KB8 TRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQLREQQQQQQQQQQKHEDGDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQLREQQQQQQQQQQKHEDGDS
310 320 330 340 350 360
430 440 450 460 470 480
pF1KB8 NGTFFVYHAIYLEELTAVELTEKIAQLFSISPCQISQIYKQGPTGIHVLISDEMIQNFQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NGTFFVYHAIYLEELTAVELTEKIAQLFSISPCQISQIYKQGPTGIHVLISDEMIQNFQE
370 380 390 400 410 420
490 500
pF1KB8 EACFILDTMKAETNDSYHIILK
:::::::::: :::::::::::
NP_001 EACFILDTMK-ETNDSYHIILK
430 440 450
>>NP_001121633 (OMIM: 609784) upstream-binding protein 1 (540 aa)
initn: 2108 init1: 1634 opt: 1674 Z-score: 1441.9 bits: 276.4 E(85289): 1.4e-73
Smith-Waterman score: 2396; 68.5% identity (84.3% similar) in 536 aa overlap (1-493:1-531)
10 20 30 40 50 60
pF1KB8 MAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSMSDVLALPIFKQEESSLPPDN
:::.::. :::::::::.::::::::::::::::::::::::::::::::.:::: :.
NP_001 MAWVLKM---DEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDG
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 ENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKLGELPEINGKLVKSIF
:.. :::::.:::::::::::::::::::::::::::::::::.:..:::::::::::.
NP_001 ETEHPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSII
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB8 RVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGIIDPRANPTQLNTVEFLWDPA
::::::::::::::::::::.:::::::.::.:::::::::: :.::.:::.::::::::
NP_001 RVVFHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPA
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB8 KRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENENGEYTEHLHSASCQIKVFKP
::::.:::::::::::: ::::::::::::.:.::::.:::::::.::::::::::::::
NP_001 KRTSAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKP
180 190 200 210 220 230
250 260 270
pF1KB8 KGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTE------------------------
:::::::::::::::::: ::::::::::.::::::
NP_001 KGADRKQKTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAVEHEQKKSSKRTLP
240 250 260 270 280 290
280 290 300 310
pF1KB8 ------------CSPWPEI--TYVNNSPSPG--FNS-SHSSFSLGEGNGS-PNHQPEPPP
:::::. .::::::::. :.: ..:. :. ..:.: :::: .
NP_001 ADYGDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGAS
300 310 320 330 340 350
320 330 340 350 360 370
pF1KB8 PVT-DNLLPTTTPQEAQQWLHRNRFSTFTRLFTNFSGADLLKLTRDDVIQICGPADGIRL
.. ... :..: ::.:::: .::::..::::.:::::::::::..:..:::: ::::::
NP_001 QTSGEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRL
360 370 380 390 400 410
380 390 400 410 420 430
pF1KB8 FNALKGRMVRPRLTIYVCQESLQLREQQQQQQQQQQKHEDGDSNGTFFVYHAIYLEELTA
.:.::.: ::::::::::.:. . : ::: .. :.: .:. .:::::::::. :
NP_001 YNSLKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSASENG--SGAPYVYHAIYLEEMIA
420 430 440 450 460 470
440 450 460 470 480 490
pF1KB8 VELTEKIAQLFSISPCQISQIYKQGPTGIHVLISDEMIQNFQEEACFILDTMKAETNDSY
:...:.: .:.: ::.:.:.:::::::.:.::.:.::::.:.::...:.:::.
NP_001 SEVARKLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNFQDESCFLFSTVKAESSDGI
480 490 500 510 520 530
500
pF1KB8 HIILK
NP_001 HIILK
540
>>NP_055332 (OMIM: 609784) upstream-binding protein 1 is (540 aa)
initn: 2108 init1: 1634 opt: 1674 Z-score: 1441.9 bits: 276.4 E(85289): 1.4e-73
Smith-Waterman score: 2396; 68.5% identity (84.3% similar) in 536 aa overlap (1-493:1-531)
10 20 30 40 50 60
pF1KB8 MAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSMSDVLALPIFKQEESSLPPDN
:::.::. :::::::::.::::::::::::::::::::::::::::::::.:::: :.
NP_055 MAWVLKM---DEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDG
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 ENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKLGELPEINGKLVKSIF
:.. :::::.:::::::::::::::::::::::::::::::::.:..:::::::::::.
NP_055 ETEHPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSII
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB8 RVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGIIDPRANPTQLNTVEFLWDPA
::::::::::::::::::::.:::::::.::.:::::::::: :.::.:::.::::::::
NP_055 RVVFHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPA
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB8 KRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENENGEYTEHLHSASCQIKVFKP
::::.:::::::::::: ::::::::::::.:.::::.:::::::.::::::::::::::
NP_055 KRTSAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKP
180 190 200 210 220 230
250 260 270
pF1KB8 KGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTE------------------------
:::::::::::::::::: ::::::::::.::::::
NP_055 KGADRKQKTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAVEHEQKKSSKRTLP
240 250 260 270 280 290
280 290 300 310
pF1KB8 ------------CSPWPEI--TYVNNSPSPG--FNS-SHSSFSLGEGNGS-PNHQPEPPP
:::::. .::::::::. :.: ..:. :. ..:.: :::: .
NP_055 ADYGDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGAS
300 310 320 330 340 350
320 330 340 350 360 370
pF1KB8 PVT-DNLLPTTTPQEAQQWLHRNRFSTFTRLFTNFSGADLLKLTRDDVIQICGPADGIRL
.. ... :..: ::.:::: .::::..::::.:::::::::::..:..:::: ::::::
NP_055 QTSGEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRL
360 370 380 390 400 410
380 390 400 410 420 430
pF1KB8 FNALKGRMVRPRLTIYVCQESLQLREQQQQQQQQQQKHEDGDSNGTFFVYHAIYLEELTA
.:.::.: ::::::::::.:. . : ::: .. :.: .:. .:::::::::. :
NP_055 YNSLKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSASENG--SGAPYVYHAIYLEEMIA
420 430 440 450 460 470
440 450 460 470 480 490
pF1KB8 VELTEKIAQLFSISPCQISQIYKQGPTGIHVLISDEMIQNFQEEACFILDTMKAETNDSY
:...:.: .:.: ::.:.:.:::::::.:.::.:.::::.:.::...:.:::.
NP_055 SEVARKLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNFQDESCFLFSTVKAESSDGI
480 490 500 510 520 530
500
pF1KB8 HIILK
NP_055 HIILK
540
>>XP_016859393 (OMIM: 609785) PREDICTED: transcription f (273 aa)
initn: 1406 init1: 1406 opt: 1420 Z-score: 1228.9 bits: 236.0 E(85289): 1e-61
Smith-Waterman score: 1420; 82.4% identity (92.2% similar) in 256 aa overlap (35-282:16-270)
10 20 30 40 50 60
pF1KB8 LKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSMSDVLALPIFKQEESSLPPDNENKI
.:.: . :::::::::::: .: :.:: ..
XP_016 MLFWHTQPEHYNQHNSGSY-LRDVLALPIFKQEEPQLSPENEARL
10 20 30 40
70 80 90 100 110 120
pF1KB8 LPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKLGELPEINGKLVKSIFRVVF
:.:::::::::::::::.:::::::::::::::.:.:::::.. ..: : ::::.::::
XP_016 PPLQYVLCAATSPAVKLHEETLTYLNQGQSYEIRLLENRKLGDFQDLNTKYVKSIIRVVF
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB8 HDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGIIDPRANPTQLNTVEFLWDPAKRTS
::::::::::::::::::.::::::::::::.::::.::::.:::::.::::::::::.:
XP_016 HDRRLQYTEHQQLEGWRWSRPGDRILDIDIPLSVGILDPRASPTQLNAVEFLWDPAKRAS
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB8 VFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENENGEYTEHLHSASCQIKVFKPKGAD
.:::::::::::: :::::::::::::::::::.::::::::::::::::::::::::::
XP_016 AFIQVHCISTEFTPRKHGGEKGVPFRVQIDTFKQNENGEYTEHLHSASCQIKVFKPKGAD
170 180 190 200 210 220
250 260 270 280 290
pF1KB8 RKQKTDREKMEKRTPHEKEKYQPSYETTILTE----CS----PWPEITYVNNSPSPGFNS
:::::::::::::: .:::::::::::::::: :: :: :
XP_016 RKQKTDREKMEKRTAQEKEKYQPSYETTILTEPQPLCSSADCPWEERSW
230 240 250 260 270
300 310 320 330 340 350
pF1KB8 SHSSFSLGEGNGSPNHQPEPPPPVTDNLLPTTTPQEAQQWLHRNRFSTFTRLFTNFSGAD
>>XP_016859394 (OMIM: 609785) PREDICTED: transcription f (273 aa)
initn: 1402 init1: 1402 opt: 1408 Z-score: 1218.6 bits: 234.1 E(85289): 3.9e-61
Smith-Waterman score: 1408; 85.1% identity (95.5% similar) in 242 aa overlap (35-276:16-256)
10 20 30 40 50 60
pF1KB8 LKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSMSDVLALPIFKQEESSLPPDNENKI
.:.: . :::::::::::: .: :.:: ..
XP_016 MLFWHTQPEHYNQHNSGSY-LRDVLALPIFKQEEPQLSPENEARL
10 20 30 40
70 80 90 100 110 120
pF1KB8 LPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKLGELPEINGKLVKSIFRVVF
:.:::::::::::::::.:::::::::::::::.:.:::::.. ..: : ::::.::::
XP_016 PPLQYVLCAATSPAVKLHEETLTYLNQGQSYEIRLLENRKLGDFQDLNTKYVKSIIRVVF
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB8 HDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGIIDPRANPTQLNTVEFLWDPAKRTS
::::::::::::::::::.::::::::::::.::::.::::.:::::.::::::::::.:
XP_016 HDRRLQYTEHQQLEGWRWSRPGDRILDIDIPLSVGILDPRASPTQLNAVEFLWDPAKRAS
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB8 VFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENENGEYTEHLHSASCQIKVFKPKGAD
.:::::::::::: :::::::::::::::::::.::::::::::::::::::::::::::
XP_016 AFIQVHCISTEFTPRKHGGEKGVPFRVQIDTFKQNENGEYTEHLHSASCQIKVFKPKGAD
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB8 RKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPWPEITYVNNSPSPGFNSSHSSFSLG
:::::::::::::: .::::::::::::::::
XP_016 RKQKTDREKMEKRTAQEKEKYQPSYETTILTEEAQRDPLGTSLAPGVTY
230 240 250 260 270
310 320 330 340 350 360
pF1KB8 EGNGSPNHQPEPPPPVTDNLLPTTTPQEAQQWLHRNRFSTFTRLFTNFSGADLLKLTRDD
502 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 12:25:10 2016 done: Fri Nov 4 12:25:11 2016
Total Scan time: 10.250 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]