FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8384, 616 aa
1>>>pF1KB8384 616 - 616 aa - 616 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.2831+/-0.000423; mu= -1.4708+/- 0.026
mean_var=337.8319+/-71.735, 0's: 0 Z-trim(122.3): 42 B-trim: 1605 in 2/56
Lambda= 0.069779
statistics sampled from 40267 (40315) to 40267 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.772), E-opt: 0.2 (0.473), width: 16
Scan time: 11.440
The best scores are: opt bits E(85289)
NP_000440 (OMIM: 209920,601863) DNA-binding protei ( 616) 4133 430.0 1.2e-119
XP_005245462 (OMIM: 209920,601863) PREDICTED: DNA- ( 616) 4133 430.0 1.2e-119
XP_005245463 (OMIM: 209920,601863) PREDICTED: DNA- ( 616) 4133 430.0 1.2e-119
NP_001020774 (OMIM: 209920,601863) DNA-binding pro ( 616) 4133 430.0 1.2e-119
XP_011508152 (OMIM: 209920,601863) PREDICTED: DNA- ( 616) 4133 430.0 1.2e-119
XP_011508151 (OMIM: 209920,601863) PREDICTED: DNA- ( 616) 4133 430.0 1.2e-119
XP_011508150 (OMIM: 209920,601863) PREDICTED: DNA- ( 616) 4133 430.0 1.2e-119
XP_011508149 (OMIM: 209920,601863) PREDICTED: DNA- ( 616) 4133 430.0 1.2e-119
XP_016857488 (OMIM: 209920,601863) PREDICTED: DNA- ( 445) 2976 313.4 1.1e-84
XP_016857489 (OMIM: 209920,601863) PREDICTED: DNA- ( 445) 2976 313.4 1.1e-84
NP_073752 (OMIM: 612660) DNA-binding protein RFX7 (1460) 806 95.4 1.4e-18
XP_005254660 (OMIM: 612660) PREDICTED: DNA-binding (1460) 806 95.4 1.4e-18
XP_016877995 (OMIM: 612660) PREDICTED: DNA-binding (1460) 806 95.4 1.4e-18
XP_016877997 (OMIM: 612660) PREDICTED: DNA-binding (1363) 613 76.0 9.6e-13
XP_016877996 (OMIM: 612660) PREDICTED: DNA-binding (1363) 613 76.0 9.6e-13
XP_011520227 (OMIM: 612660) PREDICTED: DNA-binding (1363) 613 76.0 9.6e-13
>>NP_000440 (OMIM: 209920,601863) DNA-binding protein RF (616 aa)
initn: 4133 init1: 4133 opt: 4133 Z-score: 2269.3 bits: 430.0 E(85289): 1.2e-119
Smith-Waterman score: 4133; 100.0% identity (100.0% similar) in 616 aa overlap (1-616:1-616)
10 20 30 40 50 60
pF1KB8 MAEDEPDAKSPKTGGRAPPGGAEAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MAEDEPDAKSPKTGGRAPPGGAEAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDND
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KLYLYLQLPSGPTTGDKSSEPSTLSNEEYMYAYRWIRNHLEEHTDTCLPKQSVYDAYRKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 KLYLYLQLPSGPTTGDKSSEPSTLSNEEYMYAYRWIRNHLEEHTDTCLPKQSVYDAYRKY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 CESLACCRPLSTANFGKIIREIFPDIKARRLGGRGQSKYCYSGIRRKTLVSMPPLPGLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 CESLACCRPLSTANFGKIIREIFPDIKARRLGGRGQSKYCYSGIRRKTLVSMPPLPGLDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 KGSESPEMGPEVTPAPRDELVEAACALTCDWAERILKRSFSSIVEVARFLLQQHLISARS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 KGSESPEMGPEVTPAPRDELVEAACALTCDWAERILKRSFSSIVEVARFLLQQHLISARS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 AHAHVLKAMGLAEEDEHAPRERSSKPKNGLENPEGGAHKKPERLAQPPKDLEARTGAGPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 AHAHVLKAMGLAEEDEHAPRERSSKPKNGLENPEGGAHKKPERLAQPPKDLEARTGAGPL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 ARGERKKSVVESSAPGANNLQVNALVARLPLLLPRAPRSLIPPIPVSPPILAPRLSSGAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 ARGERKKSVVESSAPGANNLQVNALVARLPLLLPRAPRSLIPPIPVSPPILAPRLSSGAL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 KVATLPLSSRAGAPPAAVPIINMILPTVPALPGPGPGPGRAPPGGLTQPRGTENREVGIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 KVATLPLSSRAGAPPAAVPIINMILPTVPALPGPGPGPGRAPPGGLTQPRGTENREVGIG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 GDQGPHDKGVKRTAEVPVSEASGQAPPAKAAKQDIEDTASDAKRKRGRPRKKSGGSGERN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 GDQGPHDKGVKRTAEVPVSEASGQAPPAKAAKQDIEDTASDAKRKRGRPRKKSGGSGERN
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 STPLKSAAAMESAQSSRLPWETWGSGGEGNSAGGAERPGPMGEAEKGAVLAQGQGDGTVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 STPLKSAAAMESAQSSRLPWETWGSGGEGNSAGGAERPGPMGEAEKGAVLAQGQGDGTVS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB8 KGGRGPGSQHTKEAEDKIPLVPSKVSVIKGSRSQKEAFPLAKGEVDTAPQGNKDLKEHVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 KGGRGPGSQHTKEAEDKIPLVPSKVSVIKGSRSQKEAFPLAKGEVDTAPQGNKDLKEHVL
550 560 570 580 590 600
610
pF1KB8 QSSLSQEHKDPKATPP
::::::::::::::::
NP_000 QSSLSQEHKDPKATPP
610
>>XP_005245462 (OMIM: 209920,601863) PREDICTED: DNA-bind (616 aa)
initn: 4133 init1: 4133 opt: 4133 Z-score: 2269.3 bits: 430.0 E(85289): 1.2e-119
Smith-Waterman score: 4133; 100.0% identity (100.0% similar) in 616 aa overlap (1-616:1-616)
10 20 30 40 50 60
pF1KB8 MAEDEPDAKSPKTGGRAPPGGAEAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAEDEPDAKSPKTGGRAPPGGAEAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDND
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KLYLYLQLPSGPTTGDKSSEPSTLSNEEYMYAYRWIRNHLEEHTDTCLPKQSVYDAYRKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KLYLYLQLPSGPTTGDKSSEPSTLSNEEYMYAYRWIRNHLEEHTDTCLPKQSVYDAYRKY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 CESLACCRPLSTANFGKIIREIFPDIKARRLGGRGQSKYCYSGIRRKTLVSMPPLPGLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CESLACCRPLSTANFGKIIREIFPDIKARRLGGRGQSKYCYSGIRRKTLVSMPPLPGLDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 KGSESPEMGPEVTPAPRDELVEAACALTCDWAERILKRSFSSIVEVARFLLQQHLISARS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KGSESPEMGPEVTPAPRDELVEAACALTCDWAERILKRSFSSIVEVARFLLQQHLISARS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 AHAHVLKAMGLAEEDEHAPRERSSKPKNGLENPEGGAHKKPERLAQPPKDLEARTGAGPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AHAHVLKAMGLAEEDEHAPRERSSKPKNGLENPEGGAHKKPERLAQPPKDLEARTGAGPL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 ARGERKKSVVESSAPGANNLQVNALVARLPLLLPRAPRSLIPPIPVSPPILAPRLSSGAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ARGERKKSVVESSAPGANNLQVNALVARLPLLLPRAPRSLIPPIPVSPPILAPRLSSGAL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 KVATLPLSSRAGAPPAAVPIINMILPTVPALPGPGPGPGRAPPGGLTQPRGTENREVGIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KVATLPLSSRAGAPPAAVPIINMILPTVPALPGPGPGPGRAPPGGLTQPRGTENREVGIG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 GDQGPHDKGVKRTAEVPVSEASGQAPPAKAAKQDIEDTASDAKRKRGRPRKKSGGSGERN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GDQGPHDKGVKRTAEVPVSEASGQAPPAKAAKQDIEDTASDAKRKRGRPRKKSGGSGERN
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 STPLKSAAAMESAQSSRLPWETWGSGGEGNSAGGAERPGPMGEAEKGAVLAQGQGDGTVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 STPLKSAAAMESAQSSRLPWETWGSGGEGNSAGGAERPGPMGEAEKGAVLAQGQGDGTVS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB8 KGGRGPGSQHTKEAEDKIPLVPSKVSVIKGSRSQKEAFPLAKGEVDTAPQGNKDLKEHVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KGGRGPGSQHTKEAEDKIPLVPSKVSVIKGSRSQKEAFPLAKGEVDTAPQGNKDLKEHVL
550 560 570 580 590 600
610
pF1KB8 QSSLSQEHKDPKATPP
::::::::::::::::
XP_005 QSSLSQEHKDPKATPP
610
>>XP_005245463 (OMIM: 209920,601863) PREDICTED: DNA-bind (616 aa)
initn: 4133 init1: 4133 opt: 4133 Z-score: 2269.3 bits: 430.0 E(85289): 1.2e-119
Smith-Waterman score: 4133; 100.0% identity (100.0% similar) in 616 aa overlap (1-616:1-616)
10 20 30 40 50 60
pF1KB8 MAEDEPDAKSPKTGGRAPPGGAEAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAEDEPDAKSPKTGGRAPPGGAEAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDND
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KLYLYLQLPSGPTTGDKSSEPSTLSNEEYMYAYRWIRNHLEEHTDTCLPKQSVYDAYRKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KLYLYLQLPSGPTTGDKSSEPSTLSNEEYMYAYRWIRNHLEEHTDTCLPKQSVYDAYRKY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 CESLACCRPLSTANFGKIIREIFPDIKARRLGGRGQSKYCYSGIRRKTLVSMPPLPGLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CESLACCRPLSTANFGKIIREIFPDIKARRLGGRGQSKYCYSGIRRKTLVSMPPLPGLDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 KGSESPEMGPEVTPAPRDELVEAACALTCDWAERILKRSFSSIVEVARFLLQQHLISARS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KGSESPEMGPEVTPAPRDELVEAACALTCDWAERILKRSFSSIVEVARFLLQQHLISARS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 AHAHVLKAMGLAEEDEHAPRERSSKPKNGLENPEGGAHKKPERLAQPPKDLEARTGAGPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AHAHVLKAMGLAEEDEHAPRERSSKPKNGLENPEGGAHKKPERLAQPPKDLEARTGAGPL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 ARGERKKSVVESSAPGANNLQVNALVARLPLLLPRAPRSLIPPIPVSPPILAPRLSSGAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ARGERKKSVVESSAPGANNLQVNALVARLPLLLPRAPRSLIPPIPVSPPILAPRLSSGAL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 KVATLPLSSRAGAPPAAVPIINMILPTVPALPGPGPGPGRAPPGGLTQPRGTENREVGIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KVATLPLSSRAGAPPAAVPIINMILPTVPALPGPGPGPGRAPPGGLTQPRGTENREVGIG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 GDQGPHDKGVKRTAEVPVSEASGQAPPAKAAKQDIEDTASDAKRKRGRPRKKSGGSGERN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GDQGPHDKGVKRTAEVPVSEASGQAPPAKAAKQDIEDTASDAKRKRGRPRKKSGGSGERN
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 STPLKSAAAMESAQSSRLPWETWGSGGEGNSAGGAERPGPMGEAEKGAVLAQGQGDGTVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 STPLKSAAAMESAQSSRLPWETWGSGGEGNSAGGAERPGPMGEAEKGAVLAQGQGDGTVS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB8 KGGRGPGSQHTKEAEDKIPLVPSKVSVIKGSRSQKEAFPLAKGEVDTAPQGNKDLKEHVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KGGRGPGSQHTKEAEDKIPLVPSKVSVIKGSRSQKEAFPLAKGEVDTAPQGNKDLKEHVL
550 560 570 580 590 600
610
pF1KB8 QSSLSQEHKDPKATPP
::::::::::::::::
XP_005 QSSLSQEHKDPKATPP
610
>>NP_001020774 (OMIM: 209920,601863) DNA-binding protein (616 aa)
initn: 4133 init1: 4133 opt: 4133 Z-score: 2269.3 bits: 430.0 E(85289): 1.2e-119
Smith-Waterman score: 4133; 100.0% identity (100.0% similar) in 616 aa overlap (1-616:1-616)
10 20 30 40 50 60
pF1KB8 MAEDEPDAKSPKTGGRAPPGGAEAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAEDEPDAKSPKTGGRAPPGGAEAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDND
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KLYLYLQLPSGPTTGDKSSEPSTLSNEEYMYAYRWIRNHLEEHTDTCLPKQSVYDAYRKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLYLYLQLPSGPTTGDKSSEPSTLSNEEYMYAYRWIRNHLEEHTDTCLPKQSVYDAYRKY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 CESLACCRPLSTANFGKIIREIFPDIKARRLGGRGQSKYCYSGIRRKTLVSMPPLPGLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CESLACCRPLSTANFGKIIREIFPDIKARRLGGRGQSKYCYSGIRRKTLVSMPPLPGLDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 KGSESPEMGPEVTPAPRDELVEAACALTCDWAERILKRSFSSIVEVARFLLQQHLISARS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGSESPEMGPEVTPAPRDELVEAACALTCDWAERILKRSFSSIVEVARFLLQQHLISARS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 AHAHVLKAMGLAEEDEHAPRERSSKPKNGLENPEGGAHKKPERLAQPPKDLEARTGAGPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AHAHVLKAMGLAEEDEHAPRERSSKPKNGLENPEGGAHKKPERLAQPPKDLEARTGAGPL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 ARGERKKSVVESSAPGANNLQVNALVARLPLLLPRAPRSLIPPIPVSPPILAPRLSSGAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARGERKKSVVESSAPGANNLQVNALVARLPLLLPRAPRSLIPPIPVSPPILAPRLSSGAL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 KVATLPLSSRAGAPPAAVPIINMILPTVPALPGPGPGPGRAPPGGLTQPRGTENREVGIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KVATLPLSSRAGAPPAAVPIINMILPTVPALPGPGPGPGRAPPGGLTQPRGTENREVGIG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 GDQGPHDKGVKRTAEVPVSEASGQAPPAKAAKQDIEDTASDAKRKRGRPRKKSGGSGERN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GDQGPHDKGVKRTAEVPVSEASGQAPPAKAAKQDIEDTASDAKRKRGRPRKKSGGSGERN
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 STPLKSAAAMESAQSSRLPWETWGSGGEGNSAGGAERPGPMGEAEKGAVLAQGQGDGTVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 STPLKSAAAMESAQSSRLPWETWGSGGEGNSAGGAERPGPMGEAEKGAVLAQGQGDGTVS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB8 KGGRGPGSQHTKEAEDKIPLVPSKVSVIKGSRSQKEAFPLAKGEVDTAPQGNKDLKEHVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGGRGPGSQHTKEAEDKIPLVPSKVSVIKGSRSQKEAFPLAKGEVDTAPQGNKDLKEHVL
550 560 570 580 590 600
610
pF1KB8 QSSLSQEHKDPKATPP
::::::::::::::::
NP_001 QSSLSQEHKDPKATPP
610
>>XP_011508152 (OMIM: 209920,601863) PREDICTED: DNA-bind (616 aa)
initn: 4133 init1: 4133 opt: 4133 Z-score: 2269.3 bits: 430.0 E(85289): 1.2e-119
Smith-Waterman score: 4133; 100.0% identity (100.0% similar) in 616 aa overlap (1-616:1-616)
10 20 30 40 50 60
pF1KB8 MAEDEPDAKSPKTGGRAPPGGAEAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAEDEPDAKSPKTGGRAPPGGAEAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDND
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KLYLYLQLPSGPTTGDKSSEPSTLSNEEYMYAYRWIRNHLEEHTDTCLPKQSVYDAYRKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KLYLYLQLPSGPTTGDKSSEPSTLSNEEYMYAYRWIRNHLEEHTDTCLPKQSVYDAYRKY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 CESLACCRPLSTANFGKIIREIFPDIKARRLGGRGQSKYCYSGIRRKTLVSMPPLPGLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CESLACCRPLSTANFGKIIREIFPDIKARRLGGRGQSKYCYSGIRRKTLVSMPPLPGLDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 KGSESPEMGPEVTPAPRDELVEAACALTCDWAERILKRSFSSIVEVARFLLQQHLISARS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KGSESPEMGPEVTPAPRDELVEAACALTCDWAERILKRSFSSIVEVARFLLQQHLISARS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 AHAHVLKAMGLAEEDEHAPRERSSKPKNGLENPEGGAHKKPERLAQPPKDLEARTGAGPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AHAHVLKAMGLAEEDEHAPRERSSKPKNGLENPEGGAHKKPERLAQPPKDLEARTGAGPL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 ARGERKKSVVESSAPGANNLQVNALVARLPLLLPRAPRSLIPPIPVSPPILAPRLSSGAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ARGERKKSVVESSAPGANNLQVNALVARLPLLLPRAPRSLIPPIPVSPPILAPRLSSGAL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 KVATLPLSSRAGAPPAAVPIINMILPTVPALPGPGPGPGRAPPGGLTQPRGTENREVGIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KVATLPLSSRAGAPPAAVPIINMILPTVPALPGPGPGPGRAPPGGLTQPRGTENREVGIG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 GDQGPHDKGVKRTAEVPVSEASGQAPPAKAAKQDIEDTASDAKRKRGRPRKKSGGSGERN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GDQGPHDKGVKRTAEVPVSEASGQAPPAKAAKQDIEDTASDAKRKRGRPRKKSGGSGERN
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 STPLKSAAAMESAQSSRLPWETWGSGGEGNSAGGAERPGPMGEAEKGAVLAQGQGDGTVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 STPLKSAAAMESAQSSRLPWETWGSGGEGNSAGGAERPGPMGEAEKGAVLAQGQGDGTVS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB8 KGGRGPGSQHTKEAEDKIPLVPSKVSVIKGSRSQKEAFPLAKGEVDTAPQGNKDLKEHVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KGGRGPGSQHTKEAEDKIPLVPSKVSVIKGSRSQKEAFPLAKGEVDTAPQGNKDLKEHVL
550 560 570 580 590 600
610
pF1KB8 QSSLSQEHKDPKATPP
::::::::::::::::
XP_011 QSSLSQEHKDPKATPP
610
>>XP_011508151 (OMIM: 209920,601863) PREDICTED: DNA-bind (616 aa)
initn: 4133 init1: 4133 opt: 4133 Z-score: 2269.3 bits: 430.0 E(85289): 1.2e-119
Smith-Waterman score: 4133; 100.0% identity (100.0% similar) in 616 aa overlap (1-616:1-616)
10 20 30 40 50 60
pF1KB8 MAEDEPDAKSPKTGGRAPPGGAEAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAEDEPDAKSPKTGGRAPPGGAEAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDND
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KLYLYLQLPSGPTTGDKSSEPSTLSNEEYMYAYRWIRNHLEEHTDTCLPKQSVYDAYRKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KLYLYLQLPSGPTTGDKSSEPSTLSNEEYMYAYRWIRNHLEEHTDTCLPKQSVYDAYRKY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 CESLACCRPLSTANFGKIIREIFPDIKARRLGGRGQSKYCYSGIRRKTLVSMPPLPGLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CESLACCRPLSTANFGKIIREIFPDIKARRLGGRGQSKYCYSGIRRKTLVSMPPLPGLDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 KGSESPEMGPEVTPAPRDELVEAACALTCDWAERILKRSFSSIVEVARFLLQQHLISARS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KGSESPEMGPEVTPAPRDELVEAACALTCDWAERILKRSFSSIVEVARFLLQQHLISARS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 AHAHVLKAMGLAEEDEHAPRERSSKPKNGLENPEGGAHKKPERLAQPPKDLEARTGAGPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AHAHVLKAMGLAEEDEHAPRERSSKPKNGLENPEGGAHKKPERLAQPPKDLEARTGAGPL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 ARGERKKSVVESSAPGANNLQVNALVARLPLLLPRAPRSLIPPIPVSPPILAPRLSSGAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ARGERKKSVVESSAPGANNLQVNALVARLPLLLPRAPRSLIPPIPVSPPILAPRLSSGAL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 KVATLPLSSRAGAPPAAVPIINMILPTVPALPGPGPGPGRAPPGGLTQPRGTENREVGIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KVATLPLSSRAGAPPAAVPIINMILPTVPALPGPGPGPGRAPPGGLTQPRGTENREVGIG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 GDQGPHDKGVKRTAEVPVSEASGQAPPAKAAKQDIEDTASDAKRKRGRPRKKSGGSGERN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GDQGPHDKGVKRTAEVPVSEASGQAPPAKAAKQDIEDTASDAKRKRGRPRKKSGGSGERN
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 STPLKSAAAMESAQSSRLPWETWGSGGEGNSAGGAERPGPMGEAEKGAVLAQGQGDGTVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 STPLKSAAAMESAQSSRLPWETWGSGGEGNSAGGAERPGPMGEAEKGAVLAQGQGDGTVS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB8 KGGRGPGSQHTKEAEDKIPLVPSKVSVIKGSRSQKEAFPLAKGEVDTAPQGNKDLKEHVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KGGRGPGSQHTKEAEDKIPLVPSKVSVIKGSRSQKEAFPLAKGEVDTAPQGNKDLKEHVL
550 560 570 580 590 600
610
pF1KB8 QSSLSQEHKDPKATPP
::::::::::::::::
XP_011 QSSLSQEHKDPKATPP
610
>>XP_011508150 (OMIM: 209920,601863) PREDICTED: DNA-bind (616 aa)
initn: 4133 init1: 4133 opt: 4133 Z-score: 2269.3 bits: 430.0 E(85289): 1.2e-119
Smith-Waterman score: 4133; 100.0% identity (100.0% similar) in 616 aa overlap (1-616:1-616)
10 20 30 40 50 60
pF1KB8 MAEDEPDAKSPKTGGRAPPGGAEAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAEDEPDAKSPKTGGRAPPGGAEAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDND
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KLYLYLQLPSGPTTGDKSSEPSTLSNEEYMYAYRWIRNHLEEHTDTCLPKQSVYDAYRKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KLYLYLQLPSGPTTGDKSSEPSTLSNEEYMYAYRWIRNHLEEHTDTCLPKQSVYDAYRKY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 CESLACCRPLSTANFGKIIREIFPDIKARRLGGRGQSKYCYSGIRRKTLVSMPPLPGLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CESLACCRPLSTANFGKIIREIFPDIKARRLGGRGQSKYCYSGIRRKTLVSMPPLPGLDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 KGSESPEMGPEVTPAPRDELVEAACALTCDWAERILKRSFSSIVEVARFLLQQHLISARS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KGSESPEMGPEVTPAPRDELVEAACALTCDWAERILKRSFSSIVEVARFLLQQHLISARS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 AHAHVLKAMGLAEEDEHAPRERSSKPKNGLENPEGGAHKKPERLAQPPKDLEARTGAGPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AHAHVLKAMGLAEEDEHAPRERSSKPKNGLENPEGGAHKKPERLAQPPKDLEARTGAGPL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 ARGERKKSVVESSAPGANNLQVNALVARLPLLLPRAPRSLIPPIPVSPPILAPRLSSGAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ARGERKKSVVESSAPGANNLQVNALVARLPLLLPRAPRSLIPPIPVSPPILAPRLSSGAL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 KVATLPLSSRAGAPPAAVPIINMILPTVPALPGPGPGPGRAPPGGLTQPRGTENREVGIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KVATLPLSSRAGAPPAAVPIINMILPTVPALPGPGPGPGRAPPGGLTQPRGTENREVGIG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 GDQGPHDKGVKRTAEVPVSEASGQAPPAKAAKQDIEDTASDAKRKRGRPRKKSGGSGERN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GDQGPHDKGVKRTAEVPVSEASGQAPPAKAAKQDIEDTASDAKRKRGRPRKKSGGSGERN
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 STPLKSAAAMESAQSSRLPWETWGSGGEGNSAGGAERPGPMGEAEKGAVLAQGQGDGTVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 STPLKSAAAMESAQSSRLPWETWGSGGEGNSAGGAERPGPMGEAEKGAVLAQGQGDGTVS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB8 KGGRGPGSQHTKEAEDKIPLVPSKVSVIKGSRSQKEAFPLAKGEVDTAPQGNKDLKEHVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KGGRGPGSQHTKEAEDKIPLVPSKVSVIKGSRSQKEAFPLAKGEVDTAPQGNKDLKEHVL
550 560 570 580 590 600
610
pF1KB8 QSSLSQEHKDPKATPP
::::::::::::::::
XP_011 QSSLSQEHKDPKATPP
610
>>XP_011508149 (OMIM: 209920,601863) PREDICTED: DNA-bind (616 aa)
initn: 4133 init1: 4133 opt: 4133 Z-score: 2269.3 bits: 430.0 E(85289): 1.2e-119
Smith-Waterman score: 4133; 100.0% identity (100.0% similar) in 616 aa overlap (1-616:1-616)
10 20 30 40 50 60
pF1KB8 MAEDEPDAKSPKTGGRAPPGGAEAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAEDEPDAKSPKTGGRAPPGGAEAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDND
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KLYLYLQLPSGPTTGDKSSEPSTLSNEEYMYAYRWIRNHLEEHTDTCLPKQSVYDAYRKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KLYLYLQLPSGPTTGDKSSEPSTLSNEEYMYAYRWIRNHLEEHTDTCLPKQSVYDAYRKY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 CESLACCRPLSTANFGKIIREIFPDIKARRLGGRGQSKYCYSGIRRKTLVSMPPLPGLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CESLACCRPLSTANFGKIIREIFPDIKARRLGGRGQSKYCYSGIRRKTLVSMPPLPGLDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 KGSESPEMGPEVTPAPRDELVEAACALTCDWAERILKRSFSSIVEVARFLLQQHLISARS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KGSESPEMGPEVTPAPRDELVEAACALTCDWAERILKRSFSSIVEVARFLLQQHLISARS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 AHAHVLKAMGLAEEDEHAPRERSSKPKNGLENPEGGAHKKPERLAQPPKDLEARTGAGPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AHAHVLKAMGLAEEDEHAPRERSSKPKNGLENPEGGAHKKPERLAQPPKDLEARTGAGPL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 ARGERKKSVVESSAPGANNLQVNALVARLPLLLPRAPRSLIPPIPVSPPILAPRLSSGAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ARGERKKSVVESSAPGANNLQVNALVARLPLLLPRAPRSLIPPIPVSPPILAPRLSSGAL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 KVATLPLSSRAGAPPAAVPIINMILPTVPALPGPGPGPGRAPPGGLTQPRGTENREVGIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KVATLPLSSRAGAPPAAVPIINMILPTVPALPGPGPGPGRAPPGGLTQPRGTENREVGIG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 GDQGPHDKGVKRTAEVPVSEASGQAPPAKAAKQDIEDTASDAKRKRGRPRKKSGGSGERN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GDQGPHDKGVKRTAEVPVSEASGQAPPAKAAKQDIEDTASDAKRKRGRPRKKSGGSGERN
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 STPLKSAAAMESAQSSRLPWETWGSGGEGNSAGGAERPGPMGEAEKGAVLAQGQGDGTVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 STPLKSAAAMESAQSSRLPWETWGSGGEGNSAGGAERPGPMGEAEKGAVLAQGQGDGTVS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB8 KGGRGPGSQHTKEAEDKIPLVPSKVSVIKGSRSQKEAFPLAKGEVDTAPQGNKDLKEHVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KGGRGPGSQHTKEAEDKIPLVPSKVSVIKGSRSQKEAFPLAKGEVDTAPQGNKDLKEHVL
550 560 570 580 590 600
610
pF1KB8 QSSLSQEHKDPKATPP
::::::::::::::::
XP_011 QSSLSQEHKDPKATPP
610
>>XP_016857488 (OMIM: 209920,601863) PREDICTED: DNA-bind (445 aa)
initn: 2976 init1: 2976 opt: 2976 Z-score: 1641.7 bits: 313.4 E(85289): 1.1e-84
Smith-Waterman score: 2976; 100.0% identity (100.0% similar) in 445 aa overlap (172-616:1-445)
150 160 170 180 190 200
pF1KB8 IFPDIKARRLGGRGQSKYCYSGIRRKTLVSMPPLPGLDLKGSESPEMGPEVTPAPRDELV
::::::::::::::::::::::::::::::
XP_016 MPPLPGLDLKGSESPEMGPEVTPAPRDELV
10 20 30
210 220 230 240 250 260
pF1KB8 EAACALTCDWAERILKRSFSSIVEVARFLLQQHLISARSAHAHVLKAMGLAEEDEHAPRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EAACALTCDWAERILKRSFSSIVEVARFLLQQHLISARSAHAHVLKAMGLAEEDEHAPRE
40 50 60 70 80 90
270 280 290 300 310 320
pF1KB8 RSSKPKNGLENPEGGAHKKPERLAQPPKDLEARTGAGPLARGERKKSVVESSAPGANNLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RSSKPKNGLENPEGGAHKKPERLAQPPKDLEARTGAGPLARGERKKSVVESSAPGANNLQ
100 110 120 130 140 150
330 340 350 360 370 380
pF1KB8 VNALVARLPLLLPRAPRSLIPPIPVSPPILAPRLSSGALKVATLPLSSRAGAPPAAVPII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VNALVARLPLLLPRAPRSLIPPIPVSPPILAPRLSSGALKVATLPLSSRAGAPPAAVPII
160 170 180 190 200 210
390 400 410 420 430 440
pF1KB8 NMILPTVPALPGPGPGPGRAPPGGLTQPRGTENREVGIGGDQGPHDKGVKRTAEVPVSEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NMILPTVPALPGPGPGPGRAPPGGLTQPRGTENREVGIGGDQGPHDKGVKRTAEVPVSEA
220 230 240 250 260 270
450 460 470 480 490 500
pF1KB8 SGQAPPAKAAKQDIEDTASDAKRKRGRPRKKSGGSGERNSTPLKSAAAMESAQSSRLPWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SGQAPPAKAAKQDIEDTASDAKRKRGRPRKKSGGSGERNSTPLKSAAAMESAQSSRLPWE
280 290 300 310 320 330
510 520 530 540 550 560
pF1KB8 TWGSGGEGNSAGGAERPGPMGEAEKGAVLAQGQGDGTVSKGGRGPGSQHTKEAEDKIPLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TWGSGGEGNSAGGAERPGPMGEAEKGAVLAQGQGDGTVSKGGRGPGSQHTKEAEDKIPLV
340 350 360 370 380 390
570 580 590 600 610
pF1KB8 PSKVSVIKGSRSQKEAFPLAKGEVDTAPQGNKDLKEHVLQSSLSQEHKDPKATPP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PSKVSVIKGSRSQKEAFPLAKGEVDTAPQGNKDLKEHVLQSSLSQEHKDPKATPP
400 410 420 430 440
>>XP_016857489 (OMIM: 209920,601863) PREDICTED: DNA-bind (445 aa)
initn: 2976 init1: 2976 opt: 2976 Z-score: 1641.7 bits: 313.4 E(85289): 1.1e-84
Smith-Waterman score: 2976; 100.0% identity (100.0% similar) in 445 aa overlap (172-616:1-445)
150 160 170 180 190 200
pF1KB8 IFPDIKARRLGGRGQSKYCYSGIRRKTLVSMPPLPGLDLKGSESPEMGPEVTPAPRDELV
::::::::::::::::::::::::::::::
XP_016 MPPLPGLDLKGSESPEMGPEVTPAPRDELV
10 20 30
210 220 230 240 250 260
pF1KB8 EAACALTCDWAERILKRSFSSIVEVARFLLQQHLISARSAHAHVLKAMGLAEEDEHAPRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EAACALTCDWAERILKRSFSSIVEVARFLLQQHLISARSAHAHVLKAMGLAEEDEHAPRE
40 50 60 70 80 90
270 280 290 300 310 320
pF1KB8 RSSKPKNGLENPEGGAHKKPERLAQPPKDLEARTGAGPLARGERKKSVVESSAPGANNLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RSSKPKNGLENPEGGAHKKPERLAQPPKDLEARTGAGPLARGERKKSVVESSAPGANNLQ
100 110 120 130 140 150
330 340 350 360 370 380
pF1KB8 VNALVARLPLLLPRAPRSLIPPIPVSPPILAPRLSSGALKVATLPLSSRAGAPPAAVPII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VNALVARLPLLLPRAPRSLIPPIPVSPPILAPRLSSGALKVATLPLSSRAGAPPAAVPII
160 170 180 190 200 210
390 400 410 420 430 440
pF1KB8 NMILPTVPALPGPGPGPGRAPPGGLTQPRGTENREVGIGGDQGPHDKGVKRTAEVPVSEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NMILPTVPALPGPGPGPGRAPPGGLTQPRGTENREVGIGGDQGPHDKGVKRTAEVPVSEA
220 230 240 250 260 270
450 460 470 480 490 500
pF1KB8 SGQAPPAKAAKQDIEDTASDAKRKRGRPRKKSGGSGERNSTPLKSAAAMESAQSSRLPWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SGQAPPAKAAKQDIEDTASDAKRKRGRPRKKSGGSGERNSTPLKSAAAMESAQSSRLPWE
280 290 300 310 320 330
510 520 530 540 550 560
pF1KB8 TWGSGGEGNSAGGAERPGPMGEAEKGAVLAQGQGDGTVSKGGRGPGSQHTKEAEDKIPLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TWGSGGEGNSAGGAERPGPMGEAEKGAVLAQGQGDGTVSKGGRGPGSQHTKEAEDKIPLV
340 350 360 370 380 390
570 580 590 600 610
pF1KB8 PSKVSVIKGSRSQKEAFPLAKGEVDTAPQGNKDLKEHVLQSSLSQEHKDPKATPP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PSKVSVIKGSRSQKEAFPLAKGEVDTAPQGNKDLKEHVLQSSLSQEHKDPKATPP
400 410 420 430 440
616 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 12:26:34 2016 done: Fri Nov 4 12:26:36 2016
Total Scan time: 11.440 Total Display time: 0.100
Function used was FASTA [36.3.4 Apr, 2011]