Result of FASTA (omim) for
pF1KB8407
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8407, 294 aa
1>>>pF1KB8407 294 - 294 aa - 294 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.5604+/-0.000332; mu= 9.9207+/- 0.021
mean_var=113.3694+/-24.811, 0's: 0 Z-trim(116.7): 41 B-trim: 29 in 1/56
Lambda= 0.120455
statistics sampled from 27994 (28034) to 27994 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.706), E-opt: 0.2 (0.329), width: 16
Scan time: 5.700
The best scores are: opt bits E(85289)
XP_016864784 (OMIM: 605308) PREDICTED: zinc finger ( 294) 1988 356.1 4.7e-98
NP_036411 (OMIM: 605308) zinc finger protein 346 i ( 294) 1988 356.1 4.7e-98
XP_016864785 (OMIM: 605308) PREDICTED: zinc finger ( 294) 1988 356.1 4.7e-98
XP_016864788 (OMIM: 605308) PREDICTED: zinc finger ( 276) 1598 288.3 1.1e-77
NP_001295142 (OMIM: 605308) zinc finger protein 34 ( 319) 1596 288.0 1.6e-77
XP_016864791 (OMIM: 605308) PREDICTED: zinc finger ( 236) 1206 220.1 3.2e-57
XP_011532798 (OMIM: 605308) PREDICTED: zinc finger ( 301) 1206 220.2 3.8e-57
NP_001295144 (OMIM: 605308) zinc finger protein 34 ( 232) 1190 217.4 2.2e-56
XP_016864790 (OMIM: 605308) PREDICTED: zinc finger ( 232) 1190 217.4 2.2e-56
XP_016864786 (OMIM: 605308) PREDICTED: zinc finger ( 292) 1162 212.6 7.5e-55
NP_001295143 (OMIM: 605308) zinc finger protein 34 ( 262) 1161 212.4 7.8e-55
XP_016864783 (OMIM: 605308) PREDICTED: zinc finger ( 310) 1162 212.6 7.9e-55
XP_016864792 (OMIM: 605308) PREDICTED: zinc finger ( 187) 840 156.5 3.7e-38
NP_001295147 (OMIM: 605308) zinc finger protein 34 ( 196) 840 156.5 3.8e-38
XP_016864789 (OMIM: 605308) PREDICTED: zinc finger ( 270) 840 156.6 4.9e-38
XP_005265917 (OMIM: 605308) PREDICTED: zinc finger ( 335) 840 156.6 5.9e-38
XP_011532795 (OMIM: 605308) PREDICTED: zinc finger ( 335) 840 156.6 5.9e-38
NP_001295148 (OMIM: 605308) zinc finger protein 34 ( 194) 836 155.8 6.2e-38
NP_001295145 (OMIM: 605308) zinc finger protein 34 ( 205) 836 155.8 6.4e-38
XP_005265921 (OMIM: 605308) PREDICTED: zinc finger ( 257) 798 149.3 7.5e-36
XP_016864787 (OMIM: 605308) PREDICTED: zinc finger ( 285) 770 144.4 2.4e-34
XP_011532797 (OMIM: 605308) PREDICTED: zinc finger ( 313) 770 144.5 2.6e-34
XP_011532796 (OMIM: 605308) PREDICTED: zinc finger ( 317) 770 144.5 2.6e-34
XP_011532799 (OMIM: 605308) PREDICTED: zinc finger ( 174) 442 87.3 2.3e-17
NP_001295150 (OMIM: 605308) zinc finger protein 34 ( 118) 404 80.6 1.7e-15
NP_001295152 (OMIM: 605308) zinc finger protein 34 ( 118) 404 80.6 1.7e-15
>>XP_016864784 (OMIM: 605308) PREDICTED: zinc finger pro (294 aa)
initn: 1988 init1: 1988 opt: 1988 Z-score: 1881.4 bits: 356.1 E(85289): 4.7e-98
Smith-Waterman score: 1988; 99.7% identity (100.0% similar) in 294 aa overlap (1-294:1-294)
10 20 30 40 50 60
pF1KB8 MEYPAPATVQAADGGAAGPYSSSELLEGQEPDGVRFDRERARRLWEAVSGAQPVGREEVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEYPAPATVQAADGGAAGPYSSSELLEGQEPDGVRFDRERARRLWEAVSGAQPVGREEVE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 HMIQKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HMIQKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 DSDQKSSRSKDKNQCCPICNMTFSSPVVAQSYYLGKTHAKNLKLKQQSTKVEALHQNREM
:::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
XP_016 DSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNREM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 IDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDFPAGKGYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDFPAGKGYP
190 200 210 220 230 240
250 260 270 280 290
pF1KB8 CKTCKIVLNSIEQYQAHVSGFKHKNQSPKTVASSLGQIPMQRQPIQKDSTTLED
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CKTCKIVLNSIEQYQAHVSGFKHKNQSPKTVASSLGQIPMQRQPIQKDSTTLED
250 260 270 280 290
>>NP_036411 (OMIM: 605308) zinc finger protein 346 isofo (294 aa)
initn: 1988 init1: 1988 opt: 1988 Z-score: 1881.4 bits: 356.1 E(85289): 4.7e-98
Smith-Waterman score: 1988; 99.7% identity (100.0% similar) in 294 aa overlap (1-294:1-294)
10 20 30 40 50 60
pF1KB8 MEYPAPATVQAADGGAAGPYSSSELLEGQEPDGVRFDRERARRLWEAVSGAQPVGREEVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 MEYPAPATVQAADGGAAGPYSSSELLEGQEPDGVRFDRERARRLWEAVSGAQPVGREEVE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 HMIQKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 HMIQKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 DSDQKSSRSKDKNQCCPICNMTFSSPVVAQSYYLGKTHAKNLKLKQQSTKVEALHQNREM
:::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
NP_036 DSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNREM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 IDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDFPAGKGYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 IDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDFPAGKGYP
190 200 210 220 230 240
250 260 270 280 290
pF1KB8 CKTCKIVLNSIEQYQAHVSGFKHKNQSPKTVASSLGQIPMQRQPIQKDSTTLED
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 CKTCKIVLNSIEQYQAHVSGFKHKNQSPKTVASSLGQIPMQRQPIQKDSTTLED
250 260 270 280 290
>>XP_016864785 (OMIM: 605308) PREDICTED: zinc finger pro (294 aa)
initn: 1988 init1: 1988 opt: 1988 Z-score: 1881.4 bits: 356.1 E(85289): 4.7e-98
Smith-Waterman score: 1988; 99.7% identity (100.0% similar) in 294 aa overlap (1-294:1-294)
10 20 30 40 50 60
pF1KB8 MEYPAPATVQAADGGAAGPYSSSELLEGQEPDGVRFDRERARRLWEAVSGAQPVGREEVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEYPAPATVQAADGGAAGPYSSSELLEGQEPDGVRFDRERARRLWEAVSGAQPVGREEVE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 HMIQKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HMIQKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 DSDQKSSRSKDKNQCCPICNMTFSSPVVAQSYYLGKTHAKNLKLKQQSTKVEALHQNREM
:::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
XP_016 DSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNREM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 IDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDFPAGKGYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDFPAGKGYP
190 200 210 220 230 240
250 260 270 280 290
pF1KB8 CKTCKIVLNSIEQYQAHVSGFKHKNQSPKTVASSLGQIPMQRQPIQKDSTTLED
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CKTCKIVLNSIEQYQAHVSGFKHKNQSPKTVASSLGQIPMQRQPIQKDSTTLED
250 260 270 280 290
>>XP_016864788 (OMIM: 605308) PREDICTED: zinc finger pro (276 aa)
initn: 1584 init1: 1584 opt: 1598 Z-score: 1515.5 bits: 288.3 E(85289): 1.1e-77
Smith-Waterman score: 1598; 85.6% identity (90.8% similar) in 284 aa overlap (1-284:1-276)
10 20 30 40 50 60
pF1KB8 MEYPAPATVQAADGGAAGPYSSSELLEGQEPDGVRFDRERARRLWEAVSGAQPVGREEVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEYPAPATVQAADGGAAGPYSSSELLEGQEPDGVRFDRERARRLWEAVSGAQPVGREEVE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 HMIQKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HMIQKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 DSDQKSSRSKDKNQCCPICNMTFSSPVVAQSYYLGKTHAKNLKLKQQSTKVEALHQNREM
:::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
XP_016 DSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNREM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 IDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDFPAGKGYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::. .
XP_016 IDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDFPGHQ---
190 200 210 220 230
250 260 270 280 290
pF1KB8 CKTCKIVLNSIEQYQAHVSGFKHKNQSPKTVASSLGQIPMQRQPIQKDSTTLED
: . ..: . . :. :.: : . .. .: :. ::
XP_016 ----KQWHHPWARFQCKGNPFR-KTQPPWKTRGDSAQHPILGQP
240 250 260 270
>>NP_001295142 (OMIM: 605308) zinc finger protein 346 is (319 aa)
initn: 1976 init1: 1596 opt: 1596 Z-score: 1512.8 bits: 288.0 E(85289): 1.6e-77
Smith-Waterman score: 1928; 91.8% identity (92.2% similar) in 319 aa overlap (1-294:1-319)
10 20 30 40 50
pF1KB8 MEYPAPATVQAADGGAAGPYSSSELLEGQEPDGVRFDRERARRLWEAVSGAQPVGREE--
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEYPAPATVQAADGGAAGPYSSSELLEGQEPDGVRFDRERARRLWEAVSGAQPVGREEAQ
10 20 30 40 50 60
60 70 80 90
pF1KB8 -----------------------VEHMIQKNQCLFTNTQCKVCCALLISESQKLAHYQSK
:::::::::::::::::::::::::::::::::::::
NP_001 FFPHSRTVIPILVLSETYSLCHPVEHMIQKNQCLFTNTQCKVCCALLISESQKLAHYQSK
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB8 KHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQSYYLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::
NP_001 KHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLG
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB8 KTHAKNLKLKQQSTKVEALHQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KTHAKNLKLKQQSTKVEALHQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETK
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB8 LKLMARYGRLADPAVTDFPAGKGYPCKTCKIVLNSIEQYQAHVSGFKHKNQSPKTVASSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKLMARYGRLADPAVTDFPAGKGYPCKTCKIVLNSIEQYQAHVSGFKHKNQSPKTVASSL
250 260 270 280 290 300
280 290
pF1KB8 GQIPMQRQPIQKDSTTLED
:::::::::::::::::::
NP_001 GQIPMQRQPIQKDSTTLED
310
>>XP_016864791 (OMIM: 605308) PREDICTED: zinc finger pro (236 aa)
initn: 1192 init1: 1192 opt: 1206 Z-score: 1148.4 bits: 220.1 E(85289): 3.2e-57
Smith-Waterman score: 1206; 81.9% identity (88.5% similar) in 226 aa overlap (59-284:19-236)
30 40 50 60 70 80
pF1KB8 QEPDGVRFDRERARRLWEAVSGAQPVGREEVEHMIQKNQCLFTNTQCKVCCALLISESQK
::::::::::::::::::::::::::::::
XP_016 MLTQMYKNSIWASLLTLSVEHMIQKNQCLFTNTQCKVCCALLISESQK
10 20 30 40
90 100 110 120 130 140
pF1KB8 LAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVV
50 60 70 80 90 100
150 160 170 180 190 200
pF1KB8 AQSYYLGKTHAKNLKLKQQSTKVEALHQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKK
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AQSHYLGKTHAKNLKLKQQSTKVEALHQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKK
110 120 130 140 150 160
210 220 230 240 250 260
pF1KB8 HRKQETKLKLMARYGRLADPAVTDFPAGKGYPCKTCKIVLNSIEQYQAHVSGFKHKNQSP
::::::::::::::::::::::::::. . : . ..: . . :. :.: :
XP_016 HRKQETKLKLMARYGRLADPAVTDFPGHQ-------KQWHHPWARFQCKGNPFR-KTQPP
170 180 190 200 210 220
270 280 290
pF1KB8 KTVASSLGQIPMQRQPIQKDSTTLED
. .. .: :. ::
XP_016 WKTRGDSAQHPILGQP
230
>>XP_011532798 (OMIM: 605308) PREDICTED: zinc finger pro (301 aa)
initn: 1192 init1: 1192 opt: 1206 Z-score: 1146.9 bits: 220.2 E(85289): 3.8e-57
Smith-Waterman score: 1538; 78.6% identity (83.5% similar) in 309 aa overlap (1-284:1-301)
10 20 30 40 50
pF1KB8 MEYPAPATVQAADGGAAGPYSSSELLEGQEPDGVRFDRERARRLWEAVSGAQPVGREE--
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MEYPAPATVQAADGGAAGPYSSSELLEGQEPDGVRFDRERARRLWEAVSGAQPVGREEAQ
10 20 30 40 50 60
60 70 80 90
pF1KB8 -----------------------VEHMIQKNQCLFTNTQCKVCCALLISESQKLAHYQSK
:::::::::::::::::::::::::::::::::::::
XP_011 FFPHSRTVIPILVLSETYSLCHPVEHMIQKNQCLFTNTQCKVCCALLISESQKLAHYQSK
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB8 KHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQSYYLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::
XP_011 KHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLG
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB8 KTHAKNLKLKQQSTKVEALHQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KTHAKNLKLKQQSTKVEALHQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETK
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB8 LKLMARYGRLADPAVTDFPAGKGYPCKTCKIVLNSIEQYQAHVSGFKHKNQSPKTVASSL
:::::::::::::::::::. . : . ..: . . :. :.: : . ..
XP_011 LKLMARYGRLADPAVTDFPGHQ-------KQWHHPWARFQCKGNPFR-KTQPPWKTRGDS
250 260 270 280 290
280 290
pF1KB8 GQIPMQRQPIQKDSTTLED
.: :. ::
XP_011 AQHPILGQP
300
>>NP_001295144 (OMIM: 605308) zinc finger protein 346 is (232 aa)
initn: 1153 init1: 1153 opt: 1190 Z-score: 1133.4 bits: 217.4 E(85289): 2.2e-56
Smith-Waterman score: 1418; 78.6% identity (78.9% similar) in 294 aa overlap (1-294:1-232)
10 20 30 40 50 60
pF1KB8 MEYPAPATVQAADGGAAGPYSSSELLEGQEPDGVRFDRERARRLWEAVSGAQPVGREEVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEYPAPATVQAADGGAAGPYSSSELLEGQEPDGVRFDRERARRLWEAVSGAQPVGREEVE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 HMIQKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HMIQKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 DSDQKSSRSKDKNQCCPICNMTFSSPVVAQSYYLGKTHAKNLKLKQQSTKVEALHQNREM
:::::::::::::::::::::::::::::::.:::::::::::::::::::::
NP_001 DSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEA-------
130 140 150 160 170
190 200 210 220 230 240
pF1KB8 IDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDFPAGKGYP
:::::
NP_001 -------------------------------------------------------GKGYP
250 260 270 280 290
pF1KB8 CKTCKIVLNSIEQYQAHVSGFKHKNQSPKTVASSLGQIPMQRQPIQKDSTTLED
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CKTCKIVLNSIEQYQAHVSGFKHKNQSPKTVASSLGQIPMQRQPIQKDSTTLED
180 190 200 210 220 230
>>XP_016864790 (OMIM: 605308) PREDICTED: zinc finger pro (232 aa)
initn: 1153 init1: 1153 opt: 1190 Z-score: 1133.4 bits: 217.4 E(85289): 2.2e-56
Smith-Waterman score: 1418; 78.6% identity (78.9% similar) in 294 aa overlap (1-294:1-232)
10 20 30 40 50 60
pF1KB8 MEYPAPATVQAADGGAAGPYSSSELLEGQEPDGVRFDRERARRLWEAVSGAQPVGREEVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEYPAPATVQAADGGAAGPYSSSELLEGQEPDGVRFDRERARRLWEAVSGAQPVGREEVE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 HMIQKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HMIQKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 DSDQKSSRSKDKNQCCPICNMTFSSPVVAQSYYLGKTHAKNLKLKQQSTKVEALHQNREM
:::::::::::::::::::::::::::::::.:::::::::::::::::::::
XP_016 DSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEA-------
130 140 150 160 170
190 200 210 220 230 240
pF1KB8 IDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDFPAGKGYP
:::::
XP_016 -------------------------------------------------------GKGYP
250 260 270 280 290
pF1KB8 CKTCKIVLNSIEQYQAHVSGFKHKNQSPKTVASSLGQIPMQRQPIQKDSTTLED
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CKTCKIVLNSIEQYQAHVSGFKHKNQSPKTVASSLGQIPMQRQPIQKDSTTLED
180 190 200 210 220 230
>>XP_016864786 (OMIM: 605308) PREDICTED: zinc finger pro (292 aa)
initn: 1178 init1: 1159 opt: 1162 Z-score: 1105.7 bits: 212.6 E(85289): 7.5e-55
Smith-Waterman score: 1556; 81.0% identity (86.0% similar) in 300 aa overlap (1-284:1-292)
10 20 30 40 50 60
pF1KB8 MEYPAPATVQAADGGAAGPYSSSELLEGQEPDGVRFDRERARRLWEAVSGAQPVGREEVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEYPAPATVQAADGGAAGPYSSSELLEGQEPDGVRFDRERARRLWEAVSGAQPVGREEVE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 HMIQKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HMIQKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKL
70 80 90 100 110 120
130 140 150 160 170
pF1KB8 DSDQKSSRSKDKNQCCPICNMTFSSPVVAQSYYLGKTHAKNLKLKQQSTKVEAL------
:::::::::::::::::::::::::::::::.::::::::::::::::::::::
XP_016 DSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALSKRLTN
130 140 150 160 170 180
180 190 200 210 220
pF1KB8 ----------HQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGR
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PFLVASTLALHQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGR
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB8 LADPAVTDFPAGKGYPCKTCKIVLNSIEQYQAHVSGFKHKNQSPKTVASSLGQIPMQRQP
::::::::::. . : . ..: . . :. :.: : . .. .: :. ::
XP_016 LADPAVTDFPGHQ-------KQWHHPWARFQCKGNPFR-KTQPPWKTRGDSAQHPILGQP
250 260 270 280 290
290
pF1KB8 IQKDSTTLED
294 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 12:40:44 2016 done: Fri Nov 4 12:40:45 2016
Total Scan time: 5.700 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]