Result of FASTA (omim) for
pF1KB8433
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8433, 283 aa
1>>>pF1KB8433 283 - 283 aa - 283 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 16.0667+/-0.000644; mu= -40.6007+/- 0.037
mean_var=954.2038+/-221.274, 0's: 0 Z-trim(115.2): 582 B-trim: 1456 in 1/57
Lambda= 0.041520
statistics sampled from 24808 (25431) to 24808 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.676), E-opt: 0.2 (0.298), width: 16
Scan time: 7.260
The best scores are: opt bits E(85289)
XP_016879298 (OMIM: 603464) PREDICTED: cyclin-depe ( 283) 1915 130.6 3.4e-30
NP_001092003 (OMIM: 603464) cyclin-dependent kinas ( 283) 1915 130.6 3.4e-30
XP_006721371 (OMIM: 603464) PREDICTED: cyclin-depe ( 354) 1915 130.7 3.9e-30
NP_001153839 (OMIM: 603464) cyclin-dependent kinas ( 289) 1893 129.3 8.5e-30
XP_016879297 (OMIM: 603464) PREDICTED: cyclin-depe ( 289) 1893 129.3 8.5e-30
NP_443714 (OMIM: 603464) cyclin-dependent kinase 1 ( 360) 1893 129.4 9.9e-30
XP_016879296 (OMIM: 603464) PREDICTED: cyclin-depe ( 337) 1675 116.3 8e-26
NP_443713 (OMIM: 603464) cyclin-dependent kinase 1 ( 272) 1653 114.9 1.7e-25
XP_016879299 (OMIM: 603464) PREDICTED: cyclin-depe ( 272) 1653 114.9 1.7e-25
XP_006721373 (OMIM: 603464) PREDICTED: cyclin-depe ( 343) 1653 115.0 2e-25
XP_011521715 (OMIM: 603464) PREDICTED: cyclin-depe ( 321) 1005 76.1 9.4e-14
XP_011521712 (OMIM: 603464) PREDICTED: cyclin-depe ( 321) 1005 76.1 9.4e-14
XP_011521718 (OMIM: 603464) PREDICTED: cyclin-depe ( 321) 1005 76.1 9.4e-14
XP_011521717 (OMIM: 603464) PREDICTED: cyclin-depe ( 321) 1005 76.1 9.4e-14
XP_011521716 (OMIM: 603464) PREDICTED: cyclin-depe ( 321) 1005 76.1 9.4e-14
XP_011521714 (OMIM: 603464) PREDICTED: cyclin-depe ( 321) 1005 76.1 9.4e-14
XP_011521713 (OMIM: 603464) PREDICTED: cyclin-depe ( 321) 1005 76.1 9.4e-14
XP_016879295 (OMIM: 603464) PREDICTED: cyclin-depe ( 355) 1005 76.2 1e-13
XP_011521710 (OMIM: 603464) PREDICTED: cyclin-depe ( 369) 1005 76.2 1e-13
XP_011521709 (OMIM: 603464) PREDICTED: cyclin-depe ( 375) 1005 76.2 1e-13
XP_011521719 (OMIM: 603464) PREDICTED: cyclin-depe ( 261) 999 75.7 1e-13
XP_011521708 (OMIM: 603464) PREDICTED: cyclin-depe ( 386) 1005 76.2 1.1e-13
XP_011521707 (OMIM: 603464) PREDICTED: cyclin-depe ( 392) 1005 76.2 1.1e-13
NP_277022 (OMIM: 176873) cyclin-dependent kinase 1 ( 526) 984 75.1 3.1e-13
NP_277025 (OMIM: 176873) cyclin-dependent kinase 1 ( 565) 984 75.1 3.3e-13
XP_011540798 (OMIM: 176873) PREDICTED: cyclin-depe ( 578) 984 75.2 3.3e-13
NP_277024 (OMIM: 176873) cyclin-dependent kinase 1 ( 748) 984 75.3 3.9e-13
XP_011540797 (OMIM: 176873) PREDICTED: cyclin-depe ( 760) 984 75.3 4e-13
XP_016858417 (OMIM: 176873) PREDICTED: cyclin-depe ( 761) 984 75.3 4e-13
XP_011540796 (OMIM: 176873) PREDICTED: cyclin-depe ( 770) 984 75.3 4e-13
XP_016858416 (OMIM: 176873) PREDICTED: cyclin-depe ( 770) 984 75.3 4e-13
NP_001278274 (OMIM: 176873) cyclin-dependent kinas ( 772) 984 75.3 4e-13
XP_016858415 (OMIM: 176873) PREDICTED: cyclin-depe ( 781) 984 75.3 4.1e-13
NP_277021 (OMIM: 176873) cyclin-dependent kinase 1 ( 782) 984 75.3 4.1e-13
XP_006711128 (OMIM: 176873) PREDICTED: cyclin-depe ( 785) 984 75.3 4.1e-13
XP_016858414 (OMIM: 176873) PREDICTED: cyclin-depe ( 791) 984 75.3 4.1e-13
XP_011540795 (OMIM: 176873) PREDICTED: cyclin-depe ( 794) 984 75.3 4.1e-13
NP_001778 (OMIM: 176873) cyclin-dependent kinase 1 ( 795) 984 75.3 4.1e-13
XP_011540794 (OMIM: 176873) PREDICTED: cyclin-depe ( 804) 984 75.3 4.1e-13
XP_011540792 (OMIM: 176873) PREDICTED: cyclin-depe ( 804) 984 75.3 4.1e-13
XP_011540793 (OMIM: 176873) PREDICTED: cyclin-depe ( 804) 984 75.3 4.1e-13
NP_277071 (OMIM: 116951) cyclin-dependent kinase 1 ( 770) 982 75.2 4.4e-13
NP_001300911 (OMIM: 116951) cyclin-dependent kinas ( 779) 982 75.2 4.4e-13
NP_076916 (OMIM: 116951) cyclin-dependent kinase 1 ( 780) 982 75.2 4.4e-13
NP_001300825 (OMIM: 116951) cyclin-dependent kinas ( 783) 982 75.2 4.4e-13
NP_001249 (OMIM: 123828) cyclin-dependent kinase 3 ( 305) 677 56.5 7.5e-08
NP_001789 (OMIM: 116953) cyclin-dependent kinase 2 ( 298) 672 56.1 9e-08
NP_001310998 (OMIM: 601955) cyclin-dependent kinas ( 305) 659 55.4 1.6e-07
NP_001790 (OMIM: 601955) cyclin-dependent kinase 7 ( 346) 659 55.4 1.7e-07
NP_004926 (OMIM: 123831,616342) cyclin-dependent-l ( 292) 632 53.7 4.7e-07
>>XP_016879298 (OMIM: 603464) PREDICTED: cyclin-dependen (283 aa)
initn: 1915 init1: 1915 opt: 1915 Z-score: 663.2 bits: 130.6 E(85289): 3.4e-30
Smith-Waterman score: 1915; 100.0% identity (100.0% similar) in 283 aa overlap (1-283:1-283)
10 20 30 40 50 60
pF1KB8 MDKEKDGIPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDKEKDGIPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 PTPFSEAQVKCIVLQVLRGLQYLHRNFIIHRDLKVSNLLMTDKGCVKTADFGLARAYGVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PTPFSEAQVKCIVLQVLRGLQYLHRNFIIHRDLKVSNLLMTDKGCVKTADFGLARAYGVP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VKPMTPKVVTLWYRAPELLLGTTTQTTSIDMWAVGCILAELLAHRPLLPGTSEIHQIDLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VKPMTPKVVTLWYRAPELLLGTTTQTTSIDMWAVGCILAELLAHRPLLPGTSEIHQIDLI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 VQLLGTPSENIWPGFSKLPLVGQYSLRKQPYNNLKHKFPWLSEAGLRLLHFLFMATAGDC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VQLLGTPSENIWPGFSKLPLVGQYSLRKQPYNNLKHKFPWLSEAGLRLLHFLFMATAGDC
190 200 210 220 230 240
250 260 270 280
pF1KB8 LESSYFKEKPLPCEPELMPTFPHHRNKRAAPATSEGQSKRCKP
:::::::::::::::::::::::::::::::::::::::::::
XP_016 LESSYFKEKPLPCEPELMPTFPHHRNKRAAPATSEGQSKRCKP
250 260 270 280
>>NP_001092003 (OMIM: 603464) cyclin-dependent kinase 10 (283 aa)
initn: 1915 init1: 1915 opt: 1915 Z-score: 663.2 bits: 130.6 E(85289): 3.4e-30
Smith-Waterman score: 1915; 100.0% identity (100.0% similar) in 283 aa overlap (1-283:1-283)
10 20 30 40 50 60
pF1KB8 MDKEKDGIPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDKEKDGIPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 PTPFSEAQVKCIVLQVLRGLQYLHRNFIIHRDLKVSNLLMTDKGCVKTADFGLARAYGVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PTPFSEAQVKCIVLQVLRGLQYLHRNFIIHRDLKVSNLLMTDKGCVKTADFGLARAYGVP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VKPMTPKVVTLWYRAPELLLGTTTQTTSIDMWAVGCILAELLAHRPLLPGTSEIHQIDLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VKPMTPKVVTLWYRAPELLLGTTTQTTSIDMWAVGCILAELLAHRPLLPGTSEIHQIDLI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 VQLLGTPSENIWPGFSKLPLVGQYSLRKQPYNNLKHKFPWLSEAGLRLLHFLFMATAGDC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VQLLGTPSENIWPGFSKLPLVGQYSLRKQPYNNLKHKFPWLSEAGLRLLHFLFMATAGDC
190 200 210 220 230 240
250 260 270 280
pF1KB8 LESSYFKEKPLPCEPELMPTFPHHRNKRAAPATSEGQSKRCKP
:::::::::::::::::::::::::::::::::::::::::::
NP_001 LESSYFKEKPLPCEPELMPTFPHHRNKRAAPATSEGQSKRCKP
250 260 270 280
>>XP_006721371 (OMIM: 603464) PREDICTED: cyclin-dependen (354 aa)
initn: 1915 init1: 1915 opt: 1915 Z-score: 662.0 bits: 130.7 E(85289): 3.9e-30
Smith-Waterman score: 1915; 100.0% identity (100.0% similar) in 283 aa overlap (1-283:72-354)
10 20 30
pF1KB8 MDKEKDGIPISSLREITLLLRLRHPNIVEL
::::::::::::::::::::::::::::::
XP_006 LNRIGEGTYGIVYRARDTQTDEIVALKKVRMDKEKDGIPISSLREITLLLRLRHPNIVEL
50 60 70 80 90 100
40 50 60 70 80 90
pF1KB8 KEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQVKCIVLQVLRGLQYLHRNFIIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQVKCIVLQVLRGLQYLHRNFIIH
110 120 130 140 150 160
100 110 120 130 140 150
pF1KB8 RDLKVSNLLMTDKGCVKTADFGLARAYGVPVKPMTPKVVTLWYRAPELLLGTTTQTTSID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RDLKVSNLLMTDKGCVKTADFGLARAYGVPVKPMTPKVVTLWYRAPELLLGTTTQTTSID
170 180 190 200 210 220
160 170 180 190 200 210
pF1KB8 MWAVGCILAELLAHRPLLPGTSEIHQIDLIVQLLGTPSENIWPGFSKLPLVGQYSLRKQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MWAVGCILAELLAHRPLLPGTSEIHQIDLIVQLLGTPSENIWPGFSKLPLVGQYSLRKQP
230 240 250 260 270 280
220 230 240 250 260 270
pF1KB8 YNNLKHKFPWLSEAGLRLLHFLFMATAGDCLESSYFKEKPLPCEPELMPTFPHHRNKRAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YNNLKHKFPWLSEAGLRLLHFLFMATAGDCLESSYFKEKPLPCEPELMPTFPHHRNKRAA
290 300 310 320 330 340
280
pF1KB8 PATSEGQSKRCKP
:::::::::::::
XP_006 PATSEGQSKRCKP
350
>>NP_001153839 (OMIM: 603464) cyclin-dependent kinase 10 (289 aa)
initn: 1901 init1: 1561 opt: 1893 Z-score: 655.9 bits: 129.3 E(85289): 8.5e-30
Smith-Waterman score: 1893; 97.9% identity (97.9% similar) in 289 aa overlap (1-283:1-289)
10 20 30 40 50 60
pF1KB8 MDKEKDGIPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDKEKDGIPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 PTPFSEAQVKCIVLQVLRGLQYLHRNFIIHRDLKVSNLLMTDKGCVKTADFGLARAYGVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PTPFSEAQVKCIVLQVLRGLQYLHRNFIIHRDLKVSNLLMTDKGCVKTADFGLARAYGVP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VKPMTPKVVTLWYRAPELLLGTTTQTTSIDMWAVGCILAELLAHRPLLPGTSEIHQIDLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VKPMTPKVVTLWYRAPELLLGTTTQTTSIDMWAVGCILAELLAHRPLLPGTSEIHQIDLI
130 140 150 160 170 180
190 200 210 220 230
pF1KB8 VQLLGTPSENIWPGFSKLPLVGQYSLRKQPYNNLKHKFPWLSEAGLRLLHFLFM------
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VQLLGTPSENIWPGFSKLPLVGQYSLRKQPYNNLKHKFPWLSEAGLRLLHFLFMYDPKKR
190 200 210 220 230 240
240 250 260 270 280
pF1KB8 ATAGDCLESSYFKEKPLPCEPELMPTFPHHRNKRAAPATSEGQSKRCKP
:::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ATAGDCLESSYFKEKPLPCEPELMPTFPHHRNKRAAPATSEGQSKRCKP
250 260 270 280
>>XP_016879297 (OMIM: 603464) PREDICTED: cyclin-dependen (289 aa)
initn: 1901 init1: 1561 opt: 1893 Z-score: 655.9 bits: 129.3 E(85289): 8.5e-30
Smith-Waterman score: 1893; 97.9% identity (97.9% similar) in 289 aa overlap (1-283:1-289)
10 20 30 40 50 60
pF1KB8 MDKEKDGIPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDKEKDGIPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 PTPFSEAQVKCIVLQVLRGLQYLHRNFIIHRDLKVSNLLMTDKGCVKTADFGLARAYGVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PTPFSEAQVKCIVLQVLRGLQYLHRNFIIHRDLKVSNLLMTDKGCVKTADFGLARAYGVP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VKPMTPKVVTLWYRAPELLLGTTTQTTSIDMWAVGCILAELLAHRPLLPGTSEIHQIDLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VKPMTPKVVTLWYRAPELLLGTTTQTTSIDMWAVGCILAELLAHRPLLPGTSEIHQIDLI
130 140 150 160 170 180
190 200 210 220 230
pF1KB8 VQLLGTPSENIWPGFSKLPLVGQYSLRKQPYNNLKHKFPWLSEAGLRLLHFLFM------
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VQLLGTPSENIWPGFSKLPLVGQYSLRKQPYNNLKHKFPWLSEAGLRLLHFLFMYDPKKR
190 200 210 220 230 240
240 250 260 270 280
pF1KB8 ATAGDCLESSYFKEKPLPCEPELMPTFPHHRNKRAAPATSEGQSKRCKP
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ATAGDCLESSYFKEKPLPCEPELMPTFPHHRNKRAAPATSEGQSKRCKP
250 260 270 280
>>NP_443714 (OMIM: 603464) cyclin-dependent kinase 10 is (360 aa)
initn: 1901 init1: 1561 opt: 1893 Z-score: 654.8 bits: 129.4 E(85289): 9.9e-30
Smith-Waterman score: 1893; 97.9% identity (97.9% similar) in 289 aa overlap (1-283:72-360)
10 20 30
pF1KB8 MDKEKDGIPISSLREITLLLRLRHPNIVEL
::::::::::::::::::::::::::::::
NP_443 LNRIGEGTYGIVYRARDTQTDEIVALKKVRMDKEKDGIPISSLREITLLLRLRHPNIVEL
50 60 70 80 90 100
40 50 60 70 80 90
pF1KB8 KEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQVKCIVLQVLRGLQYLHRNFIIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 KEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQVKCIVLQVLRGLQYLHRNFIIH
110 120 130 140 150 160
100 110 120 130 140 150
pF1KB8 RDLKVSNLLMTDKGCVKTADFGLARAYGVPVKPMTPKVVTLWYRAPELLLGTTTQTTSID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 RDLKVSNLLMTDKGCVKTADFGLARAYGVPVKPMTPKVVTLWYRAPELLLGTTTQTTSID
170 180 190 200 210 220
160 170 180 190 200 210
pF1KB8 MWAVGCILAELLAHRPLLPGTSEIHQIDLIVQLLGTPSENIWPGFSKLPLVGQYSLRKQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 MWAVGCILAELLAHRPLLPGTSEIHQIDLIVQLLGTPSENIWPGFSKLPLVGQYSLRKQP
230 240 250 260 270 280
220 230 240 250 260
pF1KB8 YNNLKHKFPWLSEAGLRLLHFLFM------ATAGDCLESSYFKEKPLPCEPELMPTFPHH
:::::::::::::::::::::::: ::::::::::::::::::::::::::::::
NP_443 YNNLKHKFPWLSEAGLRLLHFLFMYDPKKRATAGDCLESSYFKEKPLPCEPELMPTFPHH
290 300 310 320 330 340
270 280
pF1KB8 RNKRAAPATSEGQSKRCKP
:::::::::::::::::::
NP_443 RNKRAAPATSEGQSKRCKP
350 360
>>XP_016879296 (OMIM: 603464) PREDICTED: cyclin-dependen (337 aa)
initn: 1675 init1: 1675 opt: 1675 Z-score: 584.6 bits: 116.3 E(85289): 8e-26
Smith-Waterman score: 1675; 100.0% identity (100.0% similar) in 251 aa overlap (1-251:72-322)
10 20 30
pF1KB8 MDKEKDGIPISSLREITLLLRLRHPNIVEL
::::::::::::::::::::::::::::::
XP_016 LNRIGEGTYGIVYRARDTQTDEIVALKKVRMDKEKDGIPISSLREITLLLRLRHPNIVEL
50 60 70 80 90 100
40 50 60 70 80 90
pF1KB8 KEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQVKCIVLQVLRGLQYLHRNFIIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQVKCIVLQVLRGLQYLHRNFIIH
110 120 130 140 150 160
100 110 120 130 140 150
pF1KB8 RDLKVSNLLMTDKGCVKTADFGLARAYGVPVKPMTPKVVTLWYRAPELLLGTTTQTTSID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RDLKVSNLLMTDKGCVKTADFGLARAYGVPVKPMTPKVVTLWYRAPELLLGTTTQTTSID
170 180 190 200 210 220
160 170 180 190 200 210
pF1KB8 MWAVGCILAELLAHRPLLPGTSEIHQIDLIVQLLGTPSENIWPGFSKLPLVGQYSLRKQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MWAVGCILAELLAHRPLLPGTSEIHQIDLIVQLLGTPSENIWPGFSKLPLVGQYSLRKQP
230 240 250 260 270 280
220 230 240 250 260 270
pF1KB8 YNNLKHKFPWLSEAGLRLLHFLFMATAGDCLESSYFKEKPLPCEPELMPTFPHHRNKRAA
:::::::::::::::::::::::::::::::::::::::::
XP_016 YNNLKHKFPWLSEAGLRLLHFLFMATAGDCLESSYFKEKPLRLPISGVCEGCREPG
290 300 310 320 330
280
pF1KB8 PATSEGQSKRCKP
>>NP_443713 (OMIM: 603464) cyclin-dependent kinase 10 is (272 aa)
initn: 1661 init1: 1561 opt: 1653 Z-score: 578.5 bits: 114.9 E(85289): 1.7e-25
Smith-Waterman score: 1653; 97.7% identity (97.7% similar) in 257 aa overlap (1-251:1-257)
10 20 30 40 50 60
pF1KB8 MDKEKDGIPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 MDKEKDGIPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 PTPFSEAQVKCIVLQVLRGLQYLHRNFIIHRDLKVSNLLMTDKGCVKTADFGLARAYGVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 PTPFSEAQVKCIVLQVLRGLQYLHRNFIIHRDLKVSNLLMTDKGCVKTADFGLARAYGVP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VKPMTPKVVTLWYRAPELLLGTTTQTTSIDMWAVGCILAELLAHRPLLPGTSEIHQIDLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 VKPMTPKVVTLWYRAPELLLGTTTQTTSIDMWAVGCILAELLAHRPLLPGTSEIHQIDLI
130 140 150 160 170 180
190 200 210 220 230
pF1KB8 VQLLGTPSENIWPGFSKLPLVGQYSLRKQPYNNLKHKFPWLSEAGLRLLHFLFM------
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 VQLLGTPSENIWPGFSKLPLVGQYSLRKQPYNNLKHKFPWLSEAGLRLLHFLFMYDPKKR
190 200 210 220 230 240
240 250 260 270 280
pF1KB8 ATAGDCLESSYFKEKPLPCEPELMPTFPHHRNKRAAPATSEGQSKRCKP
:::::::::::::::::
NP_443 ATAGDCLESSYFKEKPLRLPISGVCEGCREPG
250 260 270
>>XP_016879299 (OMIM: 603464) PREDICTED: cyclin-dependen (272 aa)
initn: 1661 init1: 1561 opt: 1653 Z-score: 578.5 bits: 114.9 E(85289): 1.7e-25
Smith-Waterman score: 1653; 97.7% identity (97.7% similar) in 257 aa overlap (1-251:1-257)
10 20 30 40 50 60
pF1KB8 MDKEKDGIPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDKEKDGIPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 PTPFSEAQVKCIVLQVLRGLQYLHRNFIIHRDLKVSNLLMTDKGCVKTADFGLARAYGVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PTPFSEAQVKCIVLQVLRGLQYLHRNFIIHRDLKVSNLLMTDKGCVKTADFGLARAYGVP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VKPMTPKVVTLWYRAPELLLGTTTQTTSIDMWAVGCILAELLAHRPLLPGTSEIHQIDLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VKPMTPKVVTLWYRAPELLLGTTTQTTSIDMWAVGCILAELLAHRPLLPGTSEIHQIDLI
130 140 150 160 170 180
190 200 210 220 230
pF1KB8 VQLLGTPSENIWPGFSKLPLVGQYSLRKQPYNNLKHKFPWLSEAGLRLLHFLFM------
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VQLLGTPSENIWPGFSKLPLVGQYSLRKQPYNNLKHKFPWLSEAGLRLLHFLFMYDPKKR
190 200 210 220 230 240
240 250 260 270 280
pF1KB8 ATAGDCLESSYFKEKPLPCEPELMPTFPHHRNKRAAPATSEGQSKRCKP
:::::::::::::::::
XP_016 ATAGDCLESSYFKEKPLRLPISGVCEGCREPG
250 260 270
>>XP_006721373 (OMIM: 603464) PREDICTED: cyclin-dependen (343 aa)
initn: 1661 init1: 1561 opt: 1653 Z-score: 577.3 bits: 115.0 E(85289): 2e-25
Smith-Waterman score: 1653; 97.7% identity (97.7% similar) in 257 aa overlap (1-251:72-328)
10 20 30
pF1KB8 MDKEKDGIPISSLREITLLLRLRHPNIVEL
::::::::::::::::::::::::::::::
XP_006 LNRIGEGTYGIVYRARDTQTDEIVALKKVRMDKEKDGIPISSLREITLLLRLRHPNIVEL
50 60 70 80 90 100
40 50 60 70 80 90
pF1KB8 KEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQVKCIVLQVLRGLQYLHRNFIIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQVKCIVLQVLRGLQYLHRNFIIH
110 120 130 140 150 160
100 110 120 130 140 150
pF1KB8 RDLKVSNLLMTDKGCVKTADFGLARAYGVPVKPMTPKVVTLWYRAPELLLGTTTQTTSID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RDLKVSNLLMTDKGCVKTADFGLARAYGVPVKPMTPKVVTLWYRAPELLLGTTTQTTSID
170 180 190 200 210 220
160 170 180 190 200 210
pF1KB8 MWAVGCILAELLAHRPLLPGTSEIHQIDLIVQLLGTPSENIWPGFSKLPLVGQYSLRKQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MWAVGCILAELLAHRPLLPGTSEIHQIDLIVQLLGTPSENIWPGFSKLPLVGQYSLRKQP
230 240 250 260 270 280
220 230 240 250 260
pF1KB8 YNNLKHKFPWLSEAGLRLLHFLFM------ATAGDCLESSYFKEKPLPCEPELMPTFPHH
:::::::::::::::::::::::: :::::::::::::::::
XP_006 YNNLKHKFPWLSEAGLRLLHFLFMYDPKKRATAGDCLESSYFKEKPLRLPISGVCEGCRE
290 300 310 320 330 340
270 280
pF1KB8 RNKRAAPATSEGQSKRCKP
XP_006 PG
283 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 12:52:46 2016 done: Fri Nov 4 12:52:47 2016
Total Scan time: 7.260 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]