Result of FASTA (omim) for
pF1KB8445
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8445, 301 aa
1>>>pF1KB8445 301 - 301 aa - 301 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3587+/-0.000304; mu= 15.7323+/- 0.019
mean_var=72.0923+/-14.649, 0's: 0 Z-trim(117.4): 17 B-trim: 0 in 0/53
Lambda= 0.151053
statistics sampled from 29378 (29395) to 29378 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.715), E-opt: 0.2 (0.345), width: 16
Scan time: 7.570
The best scores are: opt bits E(85289)
NP_000389 (OMIM: 250800,613213) NADH-cytochrome b5 ( 301) 2075 460.9 1.4e-129
NP_001165131 (OMIM: 250800,613213) NADH-cytochrome ( 334) 2033 451.8 8.4e-127
NP_001123291 (OMIM: 250800,613213) NADH-cytochrome ( 278) 1919 426.9 2.2e-119
NP_015565 (OMIM: 250800,613213) NADH-cytochrome b5 ( 278) 1919 426.9 2.2e-119
NP_001165132 (OMIM: 250800,613213) NADH-cytochrome ( 278) 1919 426.9 2.2e-119
NP_057327 (OMIM: 608341) NADH-cytochrome b5 reduct ( 305) 1272 285.9 6.5e-77
XP_011518486 (OMIM: 608342) PREDICTED: NADH-cytoch ( 336) 1180 265.9 7.7e-71
XP_016873409 (OMIM: 608342) PREDICTED: NADH-cytoch ( 336) 1180 265.9 7.7e-71
NP_001289755 (OMIM: 608342) NADH-cytochrome b5 red ( 276) 1174 264.6 1.6e-70
XP_005253032 (OMIM: 608342) PREDICTED: NADH-cytoch ( 276) 1174 264.6 1.6e-70
XP_006718314 (OMIM: 608342) PREDICTED: NADH-cytoch ( 276) 1174 264.6 1.6e-70
NP_057313 (OMIM: 608342) NADH-cytochrome b5 reduct ( 276) 1174 264.6 1.6e-70
XP_011518487 (OMIM: 608342) PREDICTED: NADH-cytoch ( 333) 957 217.3 3.2e-56
XP_016873410 (OMIM: 608342) PREDICTED: NADH-cytoch ( 258) 821 187.6 2.2e-47
XP_016873411 (OMIM: 608342) PREDICTED: NADH-cytoch ( 198) 815 186.2 4.4e-47
NP_001289756 (OMIM: 608342) NADH-cytochrome b5 red ( 230) 815 186.3 5e-47
NP_057314 (OMIM: 608343) cytochrome b5 reductase 4 ( 521) 186 49.4 1.8e-05
>>NP_000389 (OMIM: 250800,613213) NADH-cytochrome b5 red (301 aa)
initn: 2075 init1: 2075 opt: 2075 Z-score: 2447.6 bits: 460.9 E(85289): 1.4e-129
Smith-Waterman score: 2075; 100.0% identity (100.0% similar) in 301 aa overlap (1-301:1-301)
10 20 30 40 50 60
pF1KB8 MGAQLSTLGHMVLFPVWFLYSLLMKLFQRSTPAITLESPDIKYPLRLIDREIISHDTRRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MGAQLSTLGHMVLFPVWFLYSLLMKLFQRSTPAITLESPDIKYPLRLIDREIISHDTRRF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 RFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSDDDKGFVDLVIKVYFKDTHPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 RFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSDDDKGFVDLVIKVYFKDTHPK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 FPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 FPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 GTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNKHSARFKLWYTLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 GTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNKHSARFKLWYTLD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 RAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLDHVGHPTERCFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 RAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLDHVGHPTERCFV
250 260 270 280 290 300
pF1KB8 F
:
NP_000 F
>>NP_001165131 (OMIM: 250800,613213) NADH-cytochrome b5 (334 aa)
initn: 2033 init1: 2033 opt: 2033 Z-score: 2397.5 bits: 451.8 E(85289): 8.4e-127
Smith-Waterman score: 2033; 100.0% identity (100.0% similar) in 294 aa overlap (8-301:41-334)
10 20 30
pF1KB8 MGAQLSTLGHMVLFPVWFLYSLLMKLFQRSTPAITLE
::::::::::::::::::::::::::::::
NP_001 QSKDIWGREESICERLKQDGLDVERAESWELGHMVLFPVWFLYSLLMKLFQRSTPAITLE
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB8 SPDIKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPDIKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPI
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB8 SSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKF
140 150 160 170 180 190
160 170 180 190 200 210
pF1KB8 AIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDIL
200 210 220 230 240 250
220 230 240 250 260 270
pF1KB8 LRPELEELRNKHSARFKLWYTLDRAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LRPELEELRNKHSARFKLWYTLDRAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGPP
260 270 280 290 300 310
280 290 300
pF1KB8 PMIQYACLPNLDHVGHPTERCFVF
::::::::::::::::::::::::
NP_001 PMIQYACLPNLDHVGHPTERCFVF
320 330
>>NP_001123291 (OMIM: 250800,613213) NADH-cytochrome b5 (278 aa)
initn: 1919 init1: 1919 opt: 1919 Z-score: 2264.4 bits: 426.9 E(85289): 2.2e-119
Smith-Waterman score: 1919; 100.0% identity (100.0% similar) in 278 aa overlap (24-301:1-278)
10 20 30 40 50 60
pF1KB8 MGAQLSTLGHMVLFPVWFLYSLLMKLFQRSTPAITLESPDIKYPLRLIDREIISHDTRRF
:::::::::::::::::::::::::::::::::::::
NP_001 MKLFQRSTPAITLESPDIKYPLRLIDREIISHDTRRF
10 20 30
70 80 90 100 110 120
pF1KB8 RFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSDDDKGFVDLVIKVYFKDTHPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSDDDKGFVDLVIKVYFKDTHPK
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB8 FPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAG
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB8 GTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNKHSARFKLWYTLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNKHSARFKLWYTLD
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB8 RAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLDHVGHPTERCFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLDHVGHPTERCFV
220 230 240 250 260 270
pF1KB8 F
:
NP_001 F
>>NP_015565 (OMIM: 250800,613213) NADH-cytochrome b5 red (278 aa)
initn: 1919 init1: 1919 opt: 1919 Z-score: 2264.4 bits: 426.9 E(85289): 2.2e-119
Smith-Waterman score: 1919; 100.0% identity (100.0% similar) in 278 aa overlap (24-301:1-278)
10 20 30 40 50 60
pF1KB8 MGAQLSTLGHMVLFPVWFLYSLLMKLFQRSTPAITLESPDIKYPLRLIDREIISHDTRRF
:::::::::::::::::::::::::::::::::::::
NP_015 MKLFQRSTPAITLESPDIKYPLRLIDREIISHDTRRF
10 20 30
70 80 90 100 110 120
pF1KB8 RFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSDDDKGFVDLVIKVYFKDTHPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_015 RFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSDDDKGFVDLVIKVYFKDTHPK
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB8 FPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_015 FPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAG
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB8 GTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNKHSARFKLWYTLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_015 GTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNKHSARFKLWYTLD
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB8 RAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLDHVGHPTERCFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_015 RAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLDHVGHPTERCFV
220 230 240 250 260 270
pF1KB8 F
:
NP_015 F
>>NP_001165132 (OMIM: 250800,613213) NADH-cytochrome b5 (278 aa)
initn: 1919 init1: 1919 opt: 1919 Z-score: 2264.4 bits: 426.9 E(85289): 2.2e-119
Smith-Waterman score: 1919; 100.0% identity (100.0% similar) in 278 aa overlap (24-301:1-278)
10 20 30 40 50 60
pF1KB8 MGAQLSTLGHMVLFPVWFLYSLLMKLFQRSTPAITLESPDIKYPLRLIDREIISHDTRRF
:::::::::::::::::::::::::::::::::::::
NP_001 MKLFQRSTPAITLESPDIKYPLRLIDREIISHDTRRF
10 20 30
70 80 90 100 110 120
pF1KB8 RFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSDDDKGFVDLVIKVYFKDTHPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSDDDKGFVDLVIKVYFKDTHPK
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB8 FPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAG
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB8 GTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNKHSARFKLWYTLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNKHSARFKLWYTLD
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB8 RAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLDHVGHPTERCFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLDHVGHPTERCFV
220 230 240 250 260 270
pF1KB8 F
:
NP_001 F
>>NP_057327 (OMIM: 608341) NADH-cytochrome b5 reductase (305 aa)
initn: 1296 init1: 1250 opt: 1272 Z-score: 1501.8 bits: 285.9 E(85289): 6.5e-77
Smith-Waterman score: 1272; 63.5% identity (85.9% similar) in 277 aa overlap (26-301:29-305)
10 20 30 40 50
pF1KB8 MGAQLSTLGHMVLFPVWFLYSLLMKLFQRST-PAITLESPDIKYPLRLIDREIISHD
: .:: : .:: .:. :: :::.:. .::.
NP_057 MGIQTSPVLLASLGVGLVTLLGLAVGSYLVRRSRRPQVTLLDPNEKYLLRLLDKTTVSHN
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 TRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSDDDKGFVDLVIKVYFKD
:.:::::::. .: ::::::.:::::.::::.::.:::::..::.:.:.::::::::.:
NP_057 TKRFRFALPTAHHTLGLPVGKHIYLSTRIDGSLVIRPYTPVTSDEDQGYVDLVIKVYLKG
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 THPKFPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVG
.::::: ::::::::.:...::..:::::::::.: :::.: :.:.::: : :..:..:
NP_057 VHPKFPEGGKMSQYLDSLKVGDVVEFRGPSGLLTYTGKGHFNIQPNKKSPPEPRVAKKLG
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB8 MIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNKHSARFKLW
:::::::::::::.::::.: :.: : : :::::::::::.:: .::::. .. :::::
NP_057 MIAGGTGITPMLQLIRAILKVPEDPTQCFLLFANQTEKDIILREDLEELQARYPNRFKLW
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB8 YTLDRAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLDHVGHPTE
.:::. :. : :..:::. .:::.::: : .. :::.::::::.: :: ::::..:. .
NP_057 FTLDHPPKDWAYSKGFVTADMIREHLPAPGDDVLVLLCGPPPMVQLACHPNLDKLGYSQK
250 260 270 280 290 300
300
pF1KB8 RCFVF
:..
NP_057 MRFTY
>>XP_011518486 (OMIM: 608342) PREDICTED: NADH-cytochrome (336 aa)
initn: 1216 init1: 1170 opt: 1180 Z-score: 1392.8 bits: 265.9 E(85289): 7.7e-71
Smith-Waterman score: 1180; 56.8% identity (80.1% similar) in 296 aa overlap (6-301:41-336)
10 20 30
pF1KB8 MGAQLSTLGHMVLFPVWFLYSLLMKLFQRSTPAIT
: : ... : : .: .. .: ::
XP_011 RLQLGDAPASAPPRKHPPRTRPRVGAHEDPSLLLTITVTGVTVLVLVLKSMNSRRREPIT
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB8 LESPDIKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYT
:..:. :::: ::..: :::.::::::.::::.:.::::::... : :.::..:::: ::
XP_011 LQDPEAKYPLPLIEKEKISHNTRRFRFGLPSPDHVLGLPVGNYVQLLAKIDNELVVRAYT
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB8 PISSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKG
:.:::::.:::::.::.:::..::..: ::::.::::.:.::.:: :::: : : :.: :
XP_011 PVSSDDDRGFVDLIIKIYFKNVHPQYPEGGKMTQYLENMKIGETIFFRGPRGRLFYHGPG
140 150 160 170 180 190
160 170 180 190 200 210
pF1KB8 KFAIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKD
...::::. :.: . .::::::::::::::.:: : :::.:.: :.::::::.:
XP_011 NLGIRPDQTSEPKKTLADHLGMIAGGTGITPMLQLIRHITKDPSDRTRMSLIFANQTEED
200 210 220 230 240 250
220 230 240 250 260 270
pF1KB8 ILLRPELEELRNKHSARFKLWYTLDRAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCG
::.: ::::. : .:.::::::: : .: :..:::. .::..::::: . :.:.::
XP_011 ILVRKELEEIARTHPDQFNLWYTLDRPPIGWKYSSGFVTADMIKEHLPPPAKSTLILVCG
260 270 280 290 300 310
280 290 300
pF1KB8 PPPMIQYACLPNLDHVGHPTERCFVF
:::.:: : :::...:. . :..
XP_011 PPPLIQTAAHPNLEKLGYTQDMIFTY
320 330
>>XP_016873409 (OMIM: 608342) PREDICTED: NADH-cytochrome (336 aa)
initn: 1216 init1: 1170 opt: 1180 Z-score: 1392.8 bits: 265.9 E(85289): 7.7e-71
Smith-Waterman score: 1180; 56.8% identity (80.1% similar) in 296 aa overlap (6-301:41-336)
10 20 30
pF1KB8 MGAQLSTLGHMVLFPVWFLYSLLMKLFQRSTPAIT
: : ... : : .: .. .: ::
XP_016 RLQLGDAPASAPPRKHPPRTRPRVGAHEDPSLLLTITVTGVTVLVLVLKSMNSRRREPIT
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB8 LESPDIKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYT
:..:. :::: ::..: :::.::::::.::::.:.::::::... : :.::..:::: ::
XP_016 LQDPEAKYPLPLIEKEKISHNTRRFRFGLPSPDHVLGLPVGNYVQLLAKIDNELVVRAYT
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB8 PISSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKG
:.:::::.:::::.::.:::..::..: ::::.::::.:.::.:: :::: : : :.: :
XP_016 PVSSDDDRGFVDLIIKIYFKNVHPQYPEGGKMTQYLENMKIGETIFFRGPRGRLFYHGPG
140 150 160 170 180 190
160 170 180 190 200 210
pF1KB8 KFAIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKD
...::::. :.: . .::::::::::::::.:: : :::.:.: :.::::::.:
XP_016 NLGIRPDQTSEPKKTLADHLGMIAGGTGITPMLQLIRHITKDPSDRTRMSLIFANQTEED
200 210 220 230 240 250
220 230 240 250 260 270
pF1KB8 ILLRPELEELRNKHSARFKLWYTLDRAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCG
::.: ::::. : .:.::::::: : .: :..:::. .::..::::: . :.:.::
XP_016 ILVRKELEEIARTHPDQFNLWYTLDRPPIGWKYSSGFVTADMIKEHLPPPAKSTLILVCG
260 270 280 290 300 310
280 290 300
pF1KB8 PPPMIQYACLPNLDHVGHPTERCFVF
:::.:: : :::...:. . :..
XP_016 PPPLIQTAAHPNLEKLGYTQDMIFTY
320 330
>>NP_001289755 (OMIM: 608342) NADH-cytochrome b5 reducta (276 aa)
initn: 1216 init1: 1170 opt: 1174 Z-score: 1387.0 bits: 264.6 E(85289): 1.6e-70
Smith-Waterman score: 1174; 59.9% identity (82.8% similar) in 274 aa overlap (28-301:4-276)
10 20 30 40 50 60
pF1KB8 MGAQLSTLGHMVLFPVWFLYSLLMKLFQRSTPAITLESPDIKYPLRLIDREIISHDTRRF
.: : :::..:. :::: ::..: :::.::::
NP_001 MNSRRREP-ITLQDPEAKYPLPLIEKEKISHNTRRF
10 20 30
70 80 90 100 110 120
pF1KB8 RFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSDDDKGFVDLVIKVYFKDTHPK
::.::::.:.::::::... : :.::..:::: :::.:::::.:::::.::.:::..::.
NP_001 RFGLPSPDHVLGLPVGNYVQLLAKIDNELVVRAYTPVSSDDDRGFVDLIIKIYFKNVHPQ
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB8 FPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAG
.: ::::.::::.:.::.:: :::: : : :.: :...::::. :.: . .:::::
NP_001 YPEGGKMTQYLENMKIGETIFFRGPRGRLFYHGPGNLGIRPDQTSEPKKTLADHLGMIAG
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB8 GTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNKHSARFKLWYTLD
:::::::::.:: : :::.:.: :.::::::.:::.: ::::. : .:.::::::
NP_001 GTGITPMLQLIRHITKDPSDRTRMSLIFANQTEEDILVRKELEEIARTHPDQFNLWYTLD
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB8 RAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLDHVGHPTERCFV
: : .: :..:::. .::..::::: . :.:.:::::.:: : :::...:. . :.
NP_001 RPPIGWKYSSGFVTADMIKEHLPPPAKSTLILVCGPPPLIQTAAHPNLEKLGYTQDMIFT
220 230 240 250 260 270
pF1KB8 F
.
NP_001 Y
>>XP_005253032 (OMIM: 608342) PREDICTED: NADH-cytochrome (276 aa)
initn: 1216 init1: 1170 opt: 1174 Z-score: 1387.0 bits: 264.6 E(85289): 1.6e-70
Smith-Waterman score: 1174; 59.9% identity (82.8% similar) in 274 aa overlap (28-301:4-276)
10 20 30 40 50 60
pF1KB8 MGAQLSTLGHMVLFPVWFLYSLLMKLFQRSTPAITLESPDIKYPLRLIDREIISHDTRRF
.: : :::..:. :::: ::..: :::.::::
XP_005 MNSRRREP-ITLQDPEAKYPLPLIEKEKISHNTRRF
10 20 30
70 80 90 100 110 120
pF1KB8 RFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSDDDKGFVDLVIKVYFKDTHPK
::.::::.:.::::::... : :.::..:::: :::.:::::.:::::.::.:::..::.
XP_005 RFGLPSPDHVLGLPVGNYVQLLAKIDNELVVRAYTPVSSDDDRGFVDLIIKIYFKNVHPQ
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB8 FPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAG
.: ::::.::::.:.::.:: :::: : : :.: :...::::. :.: . .:::::
XP_005 YPEGGKMTQYLENMKIGETIFFRGPRGRLFYHGPGNLGIRPDQTSEPKKTLADHLGMIAG
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB8 GTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNKHSARFKLWYTLD
:::::::::.:: : :::.:.: :.::::::.:::.: ::::. : .:.::::::
XP_005 GTGITPMLQLIRHITKDPSDRTRMSLIFANQTEEDILVRKELEEIARTHPDQFNLWYTLD
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB8 RAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLDHVGHPTERCFV
: : .: :..:::. .::..::::: . :.:.:::::.:: : :::...:. . :.
XP_005 RPPIGWKYSSGFVTADMIKEHLPPPAKSTLILVCGPPPLIQTAAHPNLEKLGYTQDMIFT
220 230 240 250 260 270
pF1KB8 F
.
XP_005 Y
301 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 12:56:46 2016 done: Fri Nov 4 12:56:47 2016
Total Scan time: 7.570 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]