FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB8454, 533 aa 1>>>pF1KB8454 533 - 533 aa - 533 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3214+/-0.000742; mu= 15.4318+/- 0.045 mean_var=114.8432+/-22.439, 0's: 0 Z-trim(112.9): 9 B-trim: 0 in 0/53 Lambda= 0.119680 statistics sampled from 13616 (13619) to 13616 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.757), E-opt: 0.2 (0.418), width: 16 Scan time: 3.770 The best scores are: opt bits E(32554) CCDS13994.2 MGAT3 gene_id:4248|Hs108|chr22 ( 533) 3801 667.0 1.5e-191 >>CCDS13994.2 MGAT3 gene_id:4248|Hs108|chr22 (533 aa) initn: 3801 init1: 3801 opt: 3801 Z-score: 3552.2 bits: 667.0 E(32554): 1.5e-191 Smith-Waterman score: 3801; 100.0% identity (100.0% similar) in 533 aa overlap (1-533:1-533) 10 20 30 40 50 60 pF1KB8 MKMRRYKLFLMFCMAGLCLISFLHFFKTLSYVTFPRELASLSPNLVSSFFWNNAPVTPQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MKMRRYKLFLMFCMAGLCLISFLHFFKTLSYVTFPRELASLSPNLVSSFFWNNAPVTPQA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 SPEPGGPDLLRTPLYSHSPLLQPLPPSKAAEELHRVDLVLPEDTTEYFVRTKAGGVCFKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 SPEPGGPDLLRTPLYSHSPLLQPLPPSKAAEELHRVDLVLPEDTTEYFVRTKAGGVCFKP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB8 GTKMLERPPPGRPEEKPEGANGSSARRPPRYLLSARERTGGRGARRKWVECVCLPGWHGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 GTKMLERPPPGRPEEKPEGANGSSARRPPRYLLSARERTGGRGARRKWVECVCLPGWHGP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB8 SCGVPTVVQYSNLPTKERLVPREVPRRVINAINVNHEFDLLDVRFHELGDVVDAFVVCES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 SCGVPTVVQYSNLPTKERLVPREVPRRVINAINVNHEFDLLDVRFHELGDVVDAFVVCES 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB8 NFTAYGEPRPLKFREMLTNGTFEYIRHKVLYVFLDHFPPGGRQDGWIADDYLRTFLTQDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 NFTAYGEPRPLKFREMLTNGTFEYIRHKVLYVFLDHFPPGGRQDGWIADDYLRTFLTQDG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB8 VSRLRNLRPDDVFIIDDADEIPARDGVLFLKLYDGWTEPFAFHMRKSLYGFFWKQPGTLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 VSRLRNLRPDDVFIIDDADEIPARDGVLFLKLYDGWTEPFAFHMRKSLYGFFWKQPGTLE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB8 VVSGCTVDMLQAVYGLDGIRLRRRQYYTMPNFRQYENRTGHILVQWSLGSPLHFAGWHCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 VVSGCTVDMLQAVYGLDGIRLRRRQYYTMPNFRQYENRTGHILVQWSLGSPLHFAGWHCS 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB8 WCFTPEGIYFKLVSAQNGDFPRWGDYEDKRDLNYIRGLIRTGGWFDGTQQEYPPADPSEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 WCFTPEGIYFKLVSAQNGDFPRWGDYEDKRDLNYIRGLIRTGGWFDGTQQEYPPADPSEH 430 440 450 460 470 480 490 500 510 520 530 pF1KB8 MYAPKYLLKNYDRFHYLLDNPYQEPRSTAAGGWRHRGPEGRPPARGKLDEAEV ::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MYAPKYLLKNYDRFHYLLDNPYQEPRSTAAGGWRHRGPEGRPPARGKLDEAEV 490 500 510 520 530 533 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Fri Nov 4 13:02:48 2016 done: Fri Nov 4 13:02:49 2016 Total Scan time: 3.770 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]