Result of FASTA (omim) for
pF1KB8508
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8508, 866 aa
1>>>pF1KB8508 866 - 866 aa - 866 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.0127+/-0.000491; mu= -5.4344+/- 0.030
mean_var=334.1074+/-69.714, 0's: 0 Z-trim(118.2): 76 B-trim: 534 in 1/54
Lambda= 0.070167
statistics sampled from 30872 (30952) to 30872 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.689), E-opt: 0.2 (0.363), width: 16
Scan time: 15.110
The best scores are: opt bits E(85289)
NP_000499 (OMIM: 105200,134820,202400,616004) fibr ( 866) 5919 614.0 9.4e-175
NP_068657 (OMIM: 105200,134820,202400,616004) fibr ( 644) 4275 447.5 9.4e-125
NP_000500 (OMIM: 134850,202400,616004) fibrinogen ( 437) 705 86.0 4.3e-16
NP_068656 (OMIM: 134850,202400,616004) fibrinogen ( 453) 705 86.0 4.4e-16
XP_016868722 (OMIM: 605776) PREDICTED: fibrinogen- ( 282) 684 83.7 1.3e-15
NP_963846 (OMIM: 605776) fibrinogen-like protein 1 ( 312) 684 83.7 1.4e-15
NP_963847 (OMIM: 605776) fibrinogen-like protein 1 ( 312) 684 83.7 1.4e-15
NP_004458 (OMIM: 605776) fibrinogen-like protein 1 ( 312) 684 83.7 1.4e-15
NP_671736 (OMIM: 605776) fibrinogen-like protein 1 ( 312) 684 83.7 1.4e-15
XP_016868721 (OMIM: 605776) PREDICTED: fibrinogen- ( 312) 684 83.7 1.4e-15
NP_006673 (OMIM: 605351) fibroleukin precursor [Ho ( 439) 580 73.3 2.8e-12
NP_116232 (OMIM: 613357) fibrinogen C domain-conta ( 461) 536 68.9 6.3e-11
NP_001138578 (OMIM: 613357) fibrinogen C domain-co ( 461) 536 68.9 6.3e-11
NP_002395 (OMIM: 600596) microfibril-associated gl ( 255) 501 65.1 4.6e-10
NP_001185624 (OMIM: 600596) microfibril-associated ( 279) 501 65.2 5e-10
NP_001300980 (OMIM: 601667) angiopoietin-1 isoform ( 298) 466 61.6 6.1e-09
NP_001137 (OMIM: 601667) angiopoietin-1 isoform 1 ( 498) 466 61.8 9.1e-09
NP_001186788 (OMIM: 601667) angiopoietin-1 isoform ( 497) 464 61.6 1e-08
XP_005272541 (OMIM: 605910,615881) PREDICTED: angi ( 424) 456 60.7 1.6e-08
XP_016868807 (OMIM: 601922) PREDICTED: angiopoieti ( 443) 441 59.2 4.8e-08
NP_001112359 (OMIM: 601922) angiopoietin-2 isoform ( 495) 441 59.3 5.2e-08
NP_001112360 (OMIM: 601922) angiopoietin-2 isoform ( 444) 438 58.9 5.9e-08
XP_011527541 (OMIM: 603705) PREDICTED: angiopoieti ( 451) 437 58.8 6.4e-08
NP_001138 (OMIM: 601922) angiopoietin-2 isoform a ( 496) 438 59.0 6.5e-08
NP_057069 (OMIM: 603705) angiopoietin-4 isoform 1 ( 503) 437 58.9 7e-08
NP_835228 (OMIM: 607666) angiopoietin-related prot ( 388) 420 57.1 1.9e-07
NP_775628 (OMIM: 604973,613860) ficolin-3 isoform ( 288) 404 55.4 4.6e-07
NP_003656 (OMIM: 604973,613860) ficolin-3 isoform ( 299) 403 55.3 5.1e-07
NP_001309738 (OMIM: 603705) angiopoietin-4 isoform ( 410) 392 54.3 1.4e-06
NP_115859 (OMIM: 600985,606408,615963) tenascin-X ( 673) 394 54.6 1.8e-06
XP_005272542 (OMIM: 605910,615881) PREDICTED: angi ( 386) 378 52.8 3.6e-06
NP_055310 (OMIM: 604774,605019) angiopoietin-relat ( 460) 373 52.4 5.8e-06
NP_061978 (OMIM: 600985,606408,615963) tenascin-X (4242) 394 55.2 7.4e-06
XP_011541037 (OMIM: 607666) PREDICTED: angiopoieti ( 323) 357 50.6 1.4e-05
NP_001315564 (OMIM: 601995) tenascin-R isoform 2 [ (1025) 366 51.9 1.8e-05
XP_011508251 (OMIM: 601995) PREDICTED: tenascin-R (1199) 366 52.0 2e-05
NP_647475 (OMIM: 605910,615881) angiopoietin-relat ( 406) 353 50.3 2.2e-05
XP_016857708 (OMIM: 601995) PREDICTED: tenascin-R (1358) 366 52.0 2.2e-05
XP_016857707 (OMIM: 601995) PREDICTED: tenascin-R (1358) 366 52.0 2.2e-05
NP_003276 (OMIM: 601995) tenascin-R isoform 1 prec (1358) 366 52.0 2.2e-05
XP_006717078 (OMIM: 601624) PREDICTED: ficolin-2 i ( 264) 323 47.1 0.00013
NP_056652 (OMIM: 601624) ficolin-2 isoform b precu ( 275) 323 47.1 0.00013
XP_011516694 (OMIM: 601624) PREDICTED: ficolin-2 i ( 302) 323 47.2 0.00014
NP_004099 (OMIM: 601624) ficolin-2 isoform a precu ( 313) 323 47.2 0.00014
NP_001994 (OMIM: 601252) ficolin-1 precursor [Homo ( 326) 319 46.8 0.0002
XP_005245634 (OMIM: 603874) PREDICTED: angiopoieti ( 491) 310 46.0 0.00051
NP_004664 (OMIM: 603874) angiopoietin-related prot ( 491) 310 46.0 0.00051
NP_036230 (OMIM: 605001) angiopoietin-related prot ( 493) 308 45.8 0.00059
NP_114123 (OMIM: 609336) angiopoietin-related prot ( 470) 286 43.6 0.0027
NP_001308340 (OMIM: 609336) angiopoietin-related p ( 470) 286 43.6 0.0027
>>NP_000499 (OMIM: 105200,134820,202400,616004) fibrinog (866 aa)
initn: 5919 init1: 5919 opt: 5919 Z-score: 3258.3 bits: 614.0 E(85289): 9.4e-175
Smith-Waterman score: 5919; 100.0% identity (100.0% similar) in 866 aa overlap (1-866:1-866)
10 20 30 40 50 60
pF1KB8 MFSMRIVCLVLSVVGTAWTADSGEGDFLAEGGGVRGPRVVERHQSACKDSDWPFCSDEDW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MFSMRIVCLVLSVVGTAWTADSGEGDFLAEGGGVRGPRVVERHQSACKDSDWPFCSDEDW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 NYKCPSGCRMKGLIDEVNQDFTNRINKLKNSLFEYQKNNKDSHSLTTNIMEILRGDFSSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 NYKCPSGCRMKGLIDEVNQDFTNRINKLKNSLFEYQKNNKDSHSLTTNIMEILRGDFSSA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 NNRDNTYNRVSEDLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 NNRDNTYNRVSEDLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 RGSCSRALAREVDLKDYEDQQKQLEQVIAKDLLPSRDRQHLPLIKMKPVPDLVPGNFKSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 RGSCSRALAREVDLKDYEDQQKQLEQVIAKDLLPSRDRQHLPLIKMKPVPDLVPGNFKSQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 LQKVPPEWKALTDMPQMRMELERPGGNEITRGGSTSYGTGSETESPRNPSSAGSWNSGSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LQKVPPEWKALTDMPQMRMELERPGGNEITRGGSTSYGTGSETESPRNPSSAGSWNSGSS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 GPGSTGNRNPGSSGTGGTATWKPGSSGPGSTGSWNSGSSGTGSTGNQNPGSPRPGSTGTW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 GPGSTGNRNPGSSGTGGTATWKPGSSGPGSTGSWNSGSSGTGSTGNQNPGSPRPGSTGTW
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 NPGSSERGSAGHWTSESSVSGSTGQWHSESGSFRPDSPGSGNARPNNPDWGTFEEVSGNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 NPGSSERGSAGHWTSESSVSGSTGQWHSESGSFRPDSPGSGNARPNNPDWGTFEEVSGNV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 SPGTRREYHTEKLVTSKGDKELRTGKEKVTSGSTTTTRRSCSKTVTKTVIGPDGHKEVTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SPGTRREYHTEKLVTSKGDKELRTGKEKVTSGSTTTTRRSCSKTVTKTVIGPDGHKEVTK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 EVVTSEDGSDCPEAMDLGTLSGIGTLDGFRHRHPDEAAFFDTASTGKTFPGFFSPMLGEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 EVVTSEDGSDCPEAMDLGTLSGIGTLDGFRHRHPDEAAFFDTASTGKTFPGFFSPMLGEF
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB8 VSETESRGSESGIFTNTKESSSHHPGIAEFPSRGKSSSYSKQFTSSTSYNRGDSTFESKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 VSETESRGSESGIFTNTKESSSHHPGIAEFPSRGKSSSYSKQFTSSTSYNRGDSTFESKS
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB8 YKMADEAGSEADHEGTHSTKRGHAKSRPVRDCDDVLQTHPSGTQSGIFNIKLPGSSKIFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 YKMADEAGSEADHEGTHSTKRGHAKSRPVRDCDDVLQTHPSGTQSGIFNIKLPGSSKIFS
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB8 VYCDQETSLGGWLLIQQRMDGSLNFNRTWQDYKRGFGSLNDEGEGEFWLGNDYLHLLTQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 VYCDQETSLGGWLLIQQRMDGSLNFNRTWQDYKRGFGSLNDEGEGEFWLGNDYLHLLTQR
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB8 GSVLRVELEDWAGNEAYAEYHFRVGSEAEGYALQVSSYEGTAGDALIEGSVEEGAEYTSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 GSVLRVELEDWAGNEAYAEYHFRVGSEAEGYALQVSSYEGTAGDALIEGSVEEGAEYTSH
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB8 NNMQFSTFDRDADQWEENCAEVYGGGWWYNNCQAANLNGIYYPGGSYDPRNNSPYEIENG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 NNMQFSTFDRDADQWEENCAEVYGGGWWYNNCQAANLNGIYYPGGSYDPRNNSPYEIENG
790 800 810 820 830 840
850 860
pF1KB8 VVWVSFRGADYSLRAVRMKIRPLVTQ
::::::::::::::::::::::::::
NP_000 VVWVSFRGADYSLRAVRMKIRPLVTQ
850 860
>>NP_068657 (OMIM: 105200,134820,202400,616004) fibrinog (644 aa)
initn: 4269 init1: 4269 opt: 4275 Z-score: 2360.7 bits: 447.5 E(85289): 9.4e-125
Smith-Waterman score: 4275; 98.3% identity (98.6% similar) in 645 aa overlap (1-645:1-641)
10 20 30 40 50 60
pF1KB8 MFSMRIVCLVLSVVGTAWTADSGEGDFLAEGGGVRGPRVVERHQSACKDSDWPFCSDEDW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 MFSMRIVCLVLSVVGTAWTADSGEGDFLAEGGGVRGPRVVERHQSACKDSDWPFCSDEDW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 NYKCPSGCRMKGLIDEVNQDFTNRINKLKNSLFEYQKNNKDSHSLTTNIMEILRGDFSSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 NYKCPSGCRMKGLIDEVNQDFTNRINKLKNSLFEYQKNNKDSHSLTTNIMEILRGDFSSA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 NNRDNTYNRVSEDLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 NNRDNTYNRVSEDLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 RGSCSRALAREVDLKDYEDQQKQLEQVIAKDLLPSRDRQHLPLIKMKPVPDLVPGNFKSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 RGSCSRALAREVDLKDYEDQQKQLEQVIAKDLLPSRDRQHLPLIKMKPVPDLVPGNFKSQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 LQKVPPEWKALTDMPQMRMELERPGGNEITRGGSTSYGTGSETESPRNPSSAGSWNSGSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 LQKVPPEWKALTDMPQMRMELERPGGNEITRGGSTSYGTGSETESPRNPSSAGSWNSGSS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 GPGSTGNRNPGSSGTGGTATWKPGSSGPGSTGSWNSGSSGTGSTGNQNPGSPRPGSTGTW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 GPGSTGNRNPGSSGTGGTATWKPGSSGPGSTGSWNSGSSGTGSTGNQNPGSPRPGSTGTW
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 NPGSSERGSAGHWTSESSVSGSTGQWHSESGSFRPDSPGSGNARPNNPDWGTFEEVSGNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 NPGSSERGSAGHWTSESSVSGSTGQWHSESGSFRPDSPGSGNARPNNPDWGTFEEVSGNV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 SPGTRREYHTEKLVTSKGDKELRTGKEKVTSGSTTTTRRSCSKTVTKTVIGPDGHKEVTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 SPGTRREYHTEKLVTSKGDKELRTGKEKVTSGSTTTTRRSCSKTVTKTVIGPDGHKEVTK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 EVVTSEDGSDCPEAMDLGTLSGIGTLDGFRHRHPDEAAFFDTASTGKTFPGFFSPMLGEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 EVVTSEDGSDCPEAMDLGTLSGIGTLDGFRHRHPDEAAFFDTASTGKTFPGFFSPMLGEF
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB8 VSETESRGSESGIFTNTKESSSHHPGIAEFPSRGKSSSYSKQFTSSTSYNRGDSTFESKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 VSETESRGSESGIFTNTKESSSHHPGIAEFPSRGKSSSYSKQFTSSTSYNRGDSTFESKS
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB8 YKMADEAGSEADHEGTHSTKRGHAKSRPVRDCDDVLQTHPSGTQSGIFNIKLPGSSKIFS
:::::::::::::::::::::::::::::: ..: : : :
NP_068 YKMADEAGSEADHEGTHSTKRGHAKSRPVRG----IHTSPLGKPSLSP
610 620 630 640
670 680 690 700 710 720
pF1KB8 VYCDQETSLGGWLLIQQRMDGSLNFNRTWQDYKRGFGSLNDEGEGEFWLGNDYLHLLTQR
>>NP_000500 (OMIM: 134850,202400,616004) fibrinogen gamm (437 aa)
initn: 697 init1: 266 opt: 705 Z-score: 409.9 bits: 86.0 E(85289): 4.3e-16
Smith-Waterman score: 705; 42.6% identity (71.9% similar) in 242 aa overlap (630-863:177-415)
600 610 620 630 640 650
pF1KB8 SYKMADEAGSEADHEGTHSTKRGHAKSRPVRDCDDVLQTHPSGTQSGIFNIKLPGSSKIF
.::.:. .. .. :::.. :: ... :
NP_000 IVNLKEKVAQLEAQCQEPCKDTVQIHDITGKDCQDI--ANKGAKQSGLYFIKPLKANQQF
150 160 170 180 190 200
660 670 680 690 700 710
pF1KB8 SVYCDQETSLGGWLLIQQRMDGSLNFNRTWQDYKRGFGSLNDEGEGEFWLGNDYLHLLTQ
:::. . : .:: ..:.:.:::..:...: .::.::: :. : ::::::. .::..
NP_000 LVYCEIDGSGNGWTVFQKRLDGSVDFKKNWIQYKEGFGHLSPTGTTEFWLGNEKIHLIST
210 220 230 240 250 260
720 730 740 750 760 770
pF1KB8 RGSV---LRVELEDWAGNEAYAEY-HFRVGSEAEGYALQVSSYEG-TAGDALIE---GSV
.... :::::::: : . :.: :.:: ::. : : . . : ::::. :.
NP_000 QSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAGGDAGDAFDGFDFGDD
270 280 290 300 310 320
780 790 800 810 820 830
pF1KB8 EEGAEYTSHNNMQFSTFDRDADQWEENCAEVYGGGWWYNNCQAANLNGIYYPGGSYDPRN
.::::.:::::.: : :..: :::: :.:::.:.:.:..:::.:: ::.:. .
NP_000 PSDKFFTSHNGMQFSTWDNDNDKFEGNCAEQDGSGWWMNKCHAGHLNGVYYQGGTYS-KA
330 340 350 360 370 380
840 850 860
pF1KB8 NSPYEIENGVVWVSFRGADYSLRAVRMKIRPLVTQ
..: .::..:.... ::.. . ::: :.
NP_000 STPNGYDNGIIWATWKTRWYSMKKTTMKIIPFNRLTIGEGQQHHLGGAKQAGDV
390 400 410 420 430
>>NP_068656 (OMIM: 134850,202400,616004) fibrinogen gamm (453 aa)
initn: 697 init1: 266 opt: 705 Z-score: 409.7 bits: 86.0 E(85289): 4.4e-16
Smith-Waterman score: 705; 42.6% identity (71.9% similar) in 242 aa overlap (630-863:177-415)
600 610 620 630 640 650
pF1KB8 SYKMADEAGSEADHEGTHSTKRGHAKSRPVRDCDDVLQTHPSGTQSGIFNIKLPGSSKIF
.::.:. .. .. :::.. :: ... :
NP_068 IVNLKEKVAQLEAQCQEPCKDTVQIHDITGKDCQDI--ANKGAKQSGLYFIKPLKANQQF
150 160 170 180 190 200
660 670 680 690 700 710
pF1KB8 SVYCDQETSLGGWLLIQQRMDGSLNFNRTWQDYKRGFGSLNDEGEGEFWLGNDYLHLLTQ
:::. . : .:: ..:.:.:::..:...: .::.::: :. : ::::::. .::..
NP_068 LVYCEIDGSGNGWTVFQKRLDGSVDFKKNWIQYKEGFGHLSPTGTTEFWLGNEKIHLIST
210 220 230 240 250 260
720 730 740 750 760 770
pF1KB8 RGSV---LRVELEDWAGNEAYAEY-HFRVGSEAEGYALQVSSYEG-TAGDALIE---GSV
.... :::::::: : . :.: :.:: ::. : : . . : ::::. :.
NP_068 QSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAGGDAGDAFDGFDFGDD
270 280 290 300 310 320
780 790 800 810 820 830
pF1KB8 EEGAEYTSHNNMQFSTFDRDADQWEENCAEVYGGGWWYNNCQAANLNGIYYPGGSYDPRN
.::::.:::::.: : :..: :::: :.:::.:.:.:..:::.:: ::.:. .
NP_068 PSDKFFTSHNGMQFSTWDNDNDKFEGNCAEQDGSGWWMNKCHAGHLNGVYYQGGTYS-KA
330 340 350 360 370 380
840 850 860
pF1KB8 NSPYEIENGVVWVSFRGADYSLRAVRMKIRPLVTQ
..: .::..:.... ::.. . ::: :.
NP_068 STPNGYDNGIIWATWKTRWYSMKKTTMKIIPFNRLTIGEGQQHHLGGAKQVRPEHPAETE
390 400 410 420 430 440
NP_068 YDSLYPEDDL
450
>>XP_016868722 (OMIM: 605776) PREDICTED: fibrinogen-like (282 aa)
initn: 630 init1: 297 opt: 684 Z-score: 401.1 bits: 83.7 E(85289): 1.3e-15
Smith-Waterman score: 685; 44.1% identity (70.1% similar) in 254 aa overlap (614-862:35-274)
590 600 610 620 630 640
pF1KB8 TSSTSYNRGDSTFESKSYKMADEAGSEADHEGTHSTKRGHAKSRPVRDCDDVLQTHPSGT
.: ..: ...: ::..... .:
XP_016 AQVRLLETRVKQQQVKIKQLLQENEVQFLDKGDENTVIDLGSKRQYADCSEIFN---DGY
10 20 30 40 50 60
650 660 670 680 690 700
pF1KB8 Q-SGIFNIKLPGSSKIFSVYCDQETSLGGWLLIQQRMDGSLNFNRTWQDYKRGFGSLNDE
. ::...:: : ::::::. .. ::: .::.: ::: :::: :.::. :::.. ..
XP_016 KLSGFYKIKPLQSPAEFSVYCDM-SDGGGWTVIQRRSDGSENFNRGWKDYENGFGNFVQK
70 80 90 100 110 120
710 720 730 740 750 760
pF1KB8 GEGEFWLGNDYLHLLT-QRGSVLRVELEDWAGNEAYAEY-HFRVGSEAEGYALQVSSYEG
.::.:::: ::.:: :. .:...: :. : ::.: .:.::.: . : :... : :
XP_016 -HGEYWLGNKNLHFLTTQEDYTLKIDLADFEKNSRYAQYKNFKVGDEKNFYELNIGEYSG
130 140 150 160 170
770 780 790 800 810 820
pF1KB8 TAGDALIEGSVEEGAEYTSHNNMQFSTFDRDADQWEENCAEVYGGGWWYNNCQAANLNGI
::::.: . : ..::. :.:::.::: :..: :::: .:::.: :..:::::.
XP_016 TAGDSLAGNFHPEVQWWASHQRMKFSTWDRDHDNYEGNCAEEDQSGWWFNRCHSANLNGV
180 190 200 210 220 230
830 840 850 860
pF1KB8 YYPGGSYDPRNNSPY--EIENGVVWVSFRGADYSLRAVRMKIRPLVTQ
:: : :: . .::.:: ...: :::..: :::::
XP_016 YYSG---------PYTAKTDNGIVWYTWHGWWYSLKSVVMKIRPNDFIPNVI
240 250 260 270 280
>>NP_963846 (OMIM: 605776) fibrinogen-like protein 1 pre (312 aa)
initn: 630 init1: 297 opt: 684 Z-score: 400.5 bits: 83.7 E(85289): 1.4e-15
Smith-Waterman score: 685; 44.1% identity (70.1% similar) in 254 aa overlap (614-862:65-304)
590 600 610 620 630 640
pF1KB8 TSSTSYNRGDSTFESKSYKMADEAGSEADHEGTHSTKRGHAKSRPVRDCDDVLQTHPSGT
.: ..: ...: ::..... .:
NP_963 AQVRLLETRVKQQQVKIKQLLQENEVQFLDKGDENTVIDLGSKRQYADCSEIFN---DGY
40 50 60 70 80 90
650 660 670 680 690 700
pF1KB8 Q-SGIFNIKLPGSSKIFSVYCDQETSLGGWLLIQQRMDGSLNFNRTWQDYKRGFGSLNDE
. ::...:: : ::::::. .. ::: .::.: ::: :::: :.::. :::.. ..
NP_963 KLSGFYKIKPLQSPAEFSVYCDM-SDGGGWTVIQRRSDGSENFNRGWKDYENGFGNFVQK
100 110 120 130 140 150
710 720 730 740 750 760
pF1KB8 GEGEFWLGNDYLHLLT-QRGSVLRVELEDWAGNEAYAEY-HFRVGSEAEGYALQVSSYEG
.::.:::: ::.:: :. .:...: :. : ::.: .:.::.: . : :... : :
NP_963 -HGEYWLGNKNLHFLTTQEDYTLKIDLADFEKNSRYAQYKNFKVGDEKNFYELNIGEYSG
160 170 180 190 200
770 780 790 800 810 820
pF1KB8 TAGDALIEGSVEEGAEYTSHNNMQFSTFDRDADQWEENCAEVYGGGWWYNNCQAANLNGI
::::.: . : ..::. :.:::.::: :..: :::: .:::.: :..:::::.
NP_963 TAGDSLAGNFHPEVQWWASHQRMKFSTWDRDHDNYEGNCAEEDQSGWWFNRCHSANLNGV
210 220 230 240 250 260
830 840 850 860
pF1KB8 YYPGGSYDPRNNSPY--EIENGVVWVSFRGADYSLRAVRMKIRPLVTQ
:: : :: . .::.:: ...: :::..: :::::
NP_963 YYSG---------PYTAKTDNGIVWYTWHGWWYSLKSVVMKIRPNDFIPNVI
270 280 290 300 310
>>NP_963847 (OMIM: 605776) fibrinogen-like protein 1 pre (312 aa)
initn: 630 init1: 297 opt: 684 Z-score: 400.5 bits: 83.7 E(85289): 1.4e-15
Smith-Waterman score: 685; 44.1% identity (70.1% similar) in 254 aa overlap (614-862:65-304)
590 600 610 620 630 640
pF1KB8 TSSTSYNRGDSTFESKSYKMADEAGSEADHEGTHSTKRGHAKSRPVRDCDDVLQTHPSGT
.: ..: ...: ::..... .:
NP_963 AQVRLLETRVKQQQVKIKQLLQENEVQFLDKGDENTVIDLGSKRQYADCSEIFN---DGY
40 50 60 70 80 90
650 660 670 680 690 700
pF1KB8 Q-SGIFNIKLPGSSKIFSVYCDQETSLGGWLLIQQRMDGSLNFNRTWQDYKRGFGSLNDE
. ::...:: : ::::::. .. ::: .::.: ::: :::: :.::. :::.. ..
NP_963 KLSGFYKIKPLQSPAEFSVYCDM-SDGGGWTVIQRRSDGSENFNRGWKDYENGFGNFVQK
100 110 120 130 140 150
710 720 730 740 750 760
pF1KB8 GEGEFWLGNDYLHLLT-QRGSVLRVELEDWAGNEAYAEY-HFRVGSEAEGYALQVSSYEG
.::.:::: ::.:: :. .:...: :. : ::.: .:.::.: . : :... : :
NP_963 -HGEYWLGNKNLHFLTTQEDYTLKIDLADFEKNSRYAQYKNFKVGDEKNFYELNIGEYSG
160 170 180 190 200
770 780 790 800 810 820
pF1KB8 TAGDALIEGSVEEGAEYTSHNNMQFSTFDRDADQWEENCAEVYGGGWWYNNCQAANLNGI
::::.: . : ..::. :.:::.::: :..: :::: .:::.: :..:::::.
NP_963 TAGDSLAGNFHPEVQWWASHQRMKFSTWDRDHDNYEGNCAEEDQSGWWFNRCHSANLNGV
210 220 230 240 250 260
830 840 850 860
pF1KB8 YYPGGSYDPRNNSPY--EIENGVVWVSFRGADYSLRAVRMKIRPLVTQ
:: : :: . .::.:: ...: :::..: :::::
NP_963 YYSG---------PYTAKTDNGIVWYTWHGWWYSLKSVVMKIRPNDFIPNVI
270 280 290 300 310
>>NP_004458 (OMIM: 605776) fibrinogen-like protein 1 pre (312 aa)
initn: 630 init1: 297 opt: 684 Z-score: 400.5 bits: 83.7 E(85289): 1.4e-15
Smith-Waterman score: 685; 44.1% identity (70.1% similar) in 254 aa overlap (614-862:65-304)
590 600 610 620 630 640
pF1KB8 TSSTSYNRGDSTFESKSYKMADEAGSEADHEGTHSTKRGHAKSRPVRDCDDVLQTHPSGT
.: ..: ...: ::..... .:
NP_004 AQVRLLETRVKQQQVKIKQLLQENEVQFLDKGDENTVIDLGSKRQYADCSEIFN---DGY
40 50 60 70 80 90
650 660 670 680 690 700
pF1KB8 Q-SGIFNIKLPGSSKIFSVYCDQETSLGGWLLIQQRMDGSLNFNRTWQDYKRGFGSLNDE
. ::...:: : ::::::. .. ::: .::.: ::: :::: :.::. :::.. ..
NP_004 KLSGFYKIKPLQSPAEFSVYCDM-SDGGGWTVIQRRSDGSENFNRGWKDYENGFGNFVQK
100 110 120 130 140 150
710 720 730 740 750 760
pF1KB8 GEGEFWLGNDYLHLLT-QRGSVLRVELEDWAGNEAYAEY-HFRVGSEAEGYALQVSSYEG
.::.:::: ::.:: :. .:...: :. : ::.: .:.::.: . : :... : :
NP_004 -HGEYWLGNKNLHFLTTQEDYTLKIDLADFEKNSRYAQYKNFKVGDEKNFYELNIGEYSG
160 170 180 190 200
770 780 790 800 810 820
pF1KB8 TAGDALIEGSVEEGAEYTSHNNMQFSTFDRDADQWEENCAEVYGGGWWYNNCQAANLNGI
::::.: . : ..::. :.:::.::: :..: :::: .:::.: :..:::::.
NP_004 TAGDSLAGNFHPEVQWWASHQRMKFSTWDRDHDNYEGNCAEEDQSGWWFNRCHSANLNGV
210 220 230 240 250 260
830 840 850 860
pF1KB8 YYPGGSYDPRNNSPY--EIENGVVWVSFRGADYSLRAVRMKIRPLVTQ
:: : :: . .::.:: ...: :::..: :::::
NP_004 YYSG---------PYTAKTDNGIVWYTWHGWWYSLKSVVMKIRPNDFIPNVI
270 280 290 300 310
>>NP_671736 (OMIM: 605776) fibrinogen-like protein 1 pre (312 aa)
initn: 630 init1: 297 opt: 684 Z-score: 400.5 bits: 83.7 E(85289): 1.4e-15
Smith-Waterman score: 685; 44.1% identity (70.1% similar) in 254 aa overlap (614-862:65-304)
590 600 610 620 630 640
pF1KB8 TSSTSYNRGDSTFESKSYKMADEAGSEADHEGTHSTKRGHAKSRPVRDCDDVLQTHPSGT
.: ..: ...: ::..... .:
NP_671 AQVRLLETRVKQQQVKIKQLLQENEVQFLDKGDENTVIDLGSKRQYADCSEIFN---DGY
40 50 60 70 80 90
650 660 670 680 690 700
pF1KB8 Q-SGIFNIKLPGSSKIFSVYCDQETSLGGWLLIQQRMDGSLNFNRTWQDYKRGFGSLNDE
. ::...:: : ::::::. .. ::: .::.: ::: :::: :.::. :::.. ..
NP_671 KLSGFYKIKPLQSPAEFSVYCDM-SDGGGWTVIQRRSDGSENFNRGWKDYENGFGNFVQK
100 110 120 130 140 150
710 720 730 740 750 760
pF1KB8 GEGEFWLGNDYLHLLT-QRGSVLRVELEDWAGNEAYAEY-HFRVGSEAEGYALQVSSYEG
.::.:::: ::.:: :. .:...: :. : ::.: .:.::.: . : :... : :
NP_671 -HGEYWLGNKNLHFLTTQEDYTLKIDLADFEKNSRYAQYKNFKVGDEKNFYELNIGEYSG
160 170 180 190 200
770 780 790 800 810 820
pF1KB8 TAGDALIEGSVEEGAEYTSHNNMQFSTFDRDADQWEENCAEVYGGGWWYNNCQAANLNGI
::::.: . : ..::. :.:::.::: :..: :::: .:::.: :..:::::.
NP_671 TAGDSLAGNFHPEVQWWASHQRMKFSTWDRDHDNYEGNCAEEDQSGWWFNRCHSANLNGV
210 220 230 240 250 260
830 840 850 860
pF1KB8 YYPGGSYDPRNNSPY--EIENGVVWVSFRGADYSLRAVRMKIRPLVTQ
:: : :: . .::.:: ...: :::..: :::::
NP_671 YYSG---------PYTAKTDNGIVWYTWHGWWYSLKSVVMKIRPNDFIPNVI
270 280 290 300 310
>>XP_016868721 (OMIM: 605776) PREDICTED: fibrinogen-like (312 aa)
initn: 630 init1: 297 opt: 684 Z-score: 400.5 bits: 83.7 E(85289): 1.4e-15
Smith-Waterman score: 685; 44.1% identity (70.1% similar) in 254 aa overlap (614-862:65-304)
590 600 610 620 630 640
pF1KB8 TSSTSYNRGDSTFESKSYKMADEAGSEADHEGTHSTKRGHAKSRPVRDCDDVLQTHPSGT
.: ..: ...: ::..... .:
XP_016 AQVRLLETRVKQQQVKIKQLLQENEVQFLDKGDENTVIDLGSKRQYADCSEIFN---DGY
40 50 60 70 80 90
650 660 670 680 690 700
pF1KB8 Q-SGIFNIKLPGSSKIFSVYCDQETSLGGWLLIQQRMDGSLNFNRTWQDYKRGFGSLNDE
. ::...:: : ::::::. .. ::: .::.: ::: :::: :.::. :::.. ..
XP_016 KLSGFYKIKPLQSPAEFSVYCDM-SDGGGWTVIQRRSDGSENFNRGWKDYENGFGNFVQK
100 110 120 130 140 150
710 720 730 740 750 760
pF1KB8 GEGEFWLGNDYLHLLT-QRGSVLRVELEDWAGNEAYAEY-HFRVGSEAEGYALQVSSYEG
.::.:::: ::.:: :. .:...: :. : ::.: .:.::.: . : :... : :
XP_016 -HGEYWLGNKNLHFLTTQEDYTLKIDLADFEKNSRYAQYKNFKVGDEKNFYELNIGEYSG
160 170 180 190 200
770 780 790 800 810 820
pF1KB8 TAGDALIEGSVEEGAEYTSHNNMQFSTFDRDADQWEENCAEVYGGGWWYNNCQAANLNGI
::::.: . : ..::. :.:::.::: :..: :::: .:::.: :..:::::.
XP_016 TAGDSLAGNFHPEVQWWASHQRMKFSTWDRDHDNYEGNCAEEDQSGWWFNRCHSANLNGV
210 220 230 240 250 260
830 840 850 860
pF1KB8 YYPGGSYDPRNNSPY--EIENGVVWVSFRGADYSLRAVRMKIRPLVTQ
:: : :: . .::.:: ...: :::..: :::::
XP_016 YYSG---------PYTAKTDNGIVWYTWHGWWYSLKSVVMKIRPNDFIPNVI
270 280 290 300 310
866 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 17:50:48 2016 done: Sat Nov 5 17:50:50 2016
Total Scan time: 15.110 Total Display time: 0.090
Function used was FASTA [36.3.4 Apr, 2011]