Result of FASTA (omim) for
pF1KB8511
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8511, 941 aa
1>>>pF1KB8511 941 - 941 aa - 941 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.0170+/-0.000435; mu= 8.6295+/- 0.027
mean_var=161.3276+/-32.256, 0's: 0 Z-trim(114.7): 23 B-trim: 0 in 0/55
Lambda= 0.100976
statistics sampled from 24750 (24767) to 24750 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.632), E-opt: 0.2 (0.29), width: 16
Scan time: 13.110
The best scores are: opt bits E(85289)
NP_036601 (OMIM: 613979,613983) pre-mRNA-processin ( 941) 6307 931.9 0
XP_006723832 (OMIM: 613979,613983) PREDICTED: pre- ( 868) 3161 473.6 1.9e-132
NP_001265557 (OMIM: 610952) crooked neck-like prot ( 687) 203 42.6 0.0082
NP_001265554 (OMIM: 610952) crooked neck-like prot ( 836) 203 42.7 0.0097
NP_057736 (OMIM: 610952) crooked neck-like protein ( 848) 203 42.7 0.0098
>>NP_036601 (OMIM: 613979,613983) pre-mRNA-processing fa (941 aa)
initn: 6307 init1: 6307 opt: 6307 Z-score: 4975.2 bits: 931.9 E(85289): 0
Smith-Waterman score: 6307; 100.0% identity (100.0% similar) in 941 aa overlap (1-941:1-941)
10 20 30 40 50 60
pF1KB8 MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KKNQAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 KKNQAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 PVPDSFFAKHLQTGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 PVPDSFFAKHLQTGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 VVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 VVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 IMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 IMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNT
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 QMVEKIIDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 QMVEKIIDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDRK
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB8 HTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 HTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRA
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB8 VAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 VAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYER
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB8 ARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQDLCEEALRHYEDFPKLWMMKGQIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 ARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQDLCEEALRHYEDFPKLWMMKGQIEE
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB8 QKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 QKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLW
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB8 LESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQRRTKSVDALKKCEHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 LESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQRRTKSVDALKKCEHD
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB8 PHVLLAVAKLFWSQRKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 PHVLLAVAKLFWSQRKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKR
850 860 870 880 890 900
910 920 930 940
pF1KB8 CESAEPRHGELWCAVSKDIANWQKKIGDILRLVAGRIKNTF
:::::::::::::::::::::::::::::::::::::::::
NP_036 CESAEPRHGELWCAVSKDIANWQKKIGDILRLVAGRIKNTF
910 920 930 940
>>XP_006723832 (OMIM: 613979,613983) PREDICTED: pre-mRNA (868 aa)
initn: 3223 init1: 2923 opt: 3161 Z-score: 2498.8 bits: 473.6 E(85289): 1.9e-132
Smith-Waterman score: 5683; 92.2% identity (92.2% similar) in 941 aa overlap (1-941:1-868)
10 20 30 40 50 60
pF1KB8 MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KKNQAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KKNQAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 PVPDSFFAKHLQTGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PVPDSFFAKHLQTGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 VVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 IMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNT
:::::::::::::::
XP_006 IMLSRAVECCPTSVE---------------------------------------------
430
490 500 510 520 530 540
pF1KB8 QMVEKIIDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDRK
::::::::::::::::::::::::::::::::
XP_006 ----------------------------DAEECDRAGSVATCQAVMRAVIGIGIEEEDRK
440 450 460
550 560 570 580 590 600
pF1KB8 HTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRA
470 480 490 500 510 520
610 620 630 640 650 660
pF1KB8 VAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYER
530 540 550 560 570 580
670 680 690 700 710 720
pF1KB8 ARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQDLCEEALRHYEDFPKLWMMKGQIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQDLCEEALRHYEDFPKLWMMKGQIEE
590 600 610 620 630 640
730 740 750 760 770 780
pF1KB8 QKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLW
650 660 670 680 690 700
790 800 810 820 830 840
pF1KB8 LESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQRRTKSVDALKKCEHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQRRTKSVDALKKCEHD
710 720 730 740 750 760
850 860 870 880 890 900
pF1KB8 PHVLLAVAKLFWSQRKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PHVLLAVAKLFWSQRKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKR
770 780 790 800 810 820
910 920 930 940
pF1KB8 CESAEPRHGELWCAVSKDIANWQKKIGDILRLVAGRIKNTF
:::::::::::::::::::::::::::::::::::::::::
XP_006 CESAEPRHGELWCAVSKDIANWQKKIGDILRLVAGRIKNTF
830 840 850 860
>>NP_001265557 (OMIM: 610952) crooked neck-like protein (687 aa)
initn: 254 init1: 106 opt: 203 Z-score: 171.4 bits: 42.6 E(85289): 0.0082
Smith-Waterman score: 302; 22.8% identity (50.8% similar) in 518 aa overlap (335-806:8-508)
310 320 330 340 350 360
pF1KB8 NPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEA-ARLQPGDTAKAVVA
: . :: : .: :..: ::. ..
NP_001 MAASTAAGKQRIPKVAKVKNKAPAEVQI--TAEQLLR
10 20 30
370 380 390 400 410
pF1KB8 QA----VRHLPQSVRIYIRAAELETDIRAKKRV-----LRKALEHVPNSVRLWKAAVELE
.: .. :: . : : .: . .:: .:: . : .. . :.
NP_001 EAKERELELLPPPPQQKITDEEELNDYKLRKRKTFEDNIRKNRTVISNWIKYAQWEESLK
40 50 60 70 80 90
420 430 440 450 460 470
pF1KB8 EPEDARIMLSRAVECCPTSVELWLALARLET----YENARKVLNKARENIPTDRHIWITA
: . :: . ::.. .. ::: :..: ..::.. ..: ..: ..:
NP_001 EIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKY
100 110 120 130 140 150
480 490 500 510 520
pF1KB8 AKLEEANGNTQMVEKIIDRAIT---SLRANGVEINREQWIQDAEECDRAGSVATCQAVMR
. .:: ::. ......: . .: :: : . : ::: .. :
NP_001 TYMEEMLGNVAGARQVFERWMEWQPEEQAWHSYINFELRYK---EVDRARTI-----YER
160 170 180 190 200
530 540 550 560 570 580
pF1KB8 AVIGIGIEEEDRKHTWMEDADSCVAHNALECARAIYAYALQVFPSK---KSVWLRAAYFE
:. . : :. :.. : : . :: .: :.. : .. . ... : ::
NP_001 FVL----VHPDVKN-WIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLYVAFAKFE
210 220 230 240 250 260
590 600 610 620 630
pF1KB8 KNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLA--GDVPAARSILALA--FQ----
.:. : .... . :. . : .. :. . . :: . ..:.. ::
NP_001 ENQKEFERVRVIYKYALDRISKQDAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEE
270 280 290 300 310 320
640 650 660 670 680
pF1KB8 --ANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTA---RVFMKSVKLEWV----
:::.. . :. ..: . : : .:.. .: ...: : . . . : :.
NP_001 VKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYL-WINYAL
330 340 350 360 370 380
690 700 710 720 730
pF1KB8 ------QDNIRAAQ--DLCEEALRHYE-DFPKLWMMKGQIEEQKEMMEKAREAYNQGLKK
.: :. : . : . : . : :.:.. .:.: ... . ::.: . .. :
NP_001 YEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSIGK
390 400 410 420 430 440
740 750 760 770 780 790
pF1KB8 CPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANT
::.. :. . .:: .. .. : : . :: .:.: :.. ..:: : . : .
NP_001 CPKNK-LFKVYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIDRARA
450 460 470 480 490 500
800 810 820 830 840 850
pF1KB8 LMAKALQECPNSGILWSEAIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRKIT
.. :...
NP_001 IYELAISQPRLDMPEVLWKSYIDFEIEQEETERTRNLYRRLLQRTQHVKVWISFAQFELS
510 520 530 540 550 560
>>NP_001265554 (OMIM: 610952) crooked neck-like protein (836 aa)
initn: 196 init1: 106 opt: 203 Z-score: 170.2 bits: 42.7 E(85289): 0.0097
Smith-Waterman score: 302; 22.8% identity (50.8% similar) in 518 aa overlap (335-806:157-657)
310 320 330 340 350 360
pF1KB8 NPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEA-ARLQPGDTAKAVVA
: . :: : .: :..: ::. ..
NP_001 VSSQSRFLASVPGTGVQRSTAADMAASTAAGKQRIPKVAKVKNKAPAEVQI--TAEQLLR
130 140 150 160 170 180
370 380 390 400 410
pF1KB8 QA----VRHLPQSVRIYIRAAELETDIRAKKRV-----LRKALEHVPNSVRLWKAAVELE
.: .. :: . : : .: . .:: .:: . : .. . :.
NP_001 EAKERELELLPPPPQQKITDEEELNDYKLRKRKTFEDNIRKNRTVISNWIKYAQWEESLK
190 200 210 220 230 240
420 430 440 450 460 470
pF1KB8 EPEDARIMLSRAVECCPTSVELWLALARLET----YENARKVLNKARENIPTDRHIWITA
: . :: . ::.. .. ::: :..: ..::.. ..: ..: ..:
NP_001 EIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKY
250 260 270 280 290 300
480 490 500 510 520
pF1KB8 AKLEEANGNTQMVEKIIDRAIT---SLRANGVEINREQWIQDAEECDRAGSVATCQAVMR
. .:: ::. ......: . .: :: : . : ::: .. :
NP_001 TYMEEMLGNVAGARQVFERWMEWQPEEQAWHSYINFELRYK---EVDRARTI-----YER
310 320 330 340 350
530 540 550 560 570 580
pF1KB8 AVIGIGIEEEDRKHTWMEDADSCVAHNALECARAIYAYALQVFPSK---KSVWLRAAYFE
:. . : :. :.. : : . :: .: :.. : .. . ... : ::
NP_001 FVL----VHPDVKN-WIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLYVAFAKFE
360 370 380 390 400 410
590 600 610 620 630
pF1KB8 KNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLA--GDVPAARSILALA--FQ----
.:. : .... . :. . : .. :. . . :: . ..:.. ::
NP_001 ENQKEFERVRVIYKYALDRISKQDAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEE
420 430 440 450 460 470
640 650 660 670 680
pF1KB8 --ANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTA---RVFMKSVKLEWV----
:::.. . :. ..: . : : .:.. .: ...: : . . . : :.
NP_001 VKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYL-WINYAL
480 490 500 510 520 530
690 700 710 720 730
pF1KB8 ------QDNIRAAQ--DLCEEALRHYE-DFPKLWMMKGQIEEQKEMMEKAREAYNQGLKK
.: :. : . : . : . : :.:.. .:.: ... . ::.: . .. :
NP_001 YEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSIGK
540 550 560 570 580 590
740 750 760 770 780 790
pF1KB8 CPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANT
::.. :. . .:: .. .. : : . :: .:.: :.. ..:: : . : .
NP_001 CPKNK-LFKVYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIDRARA
600 610 620 630 640
800 810 820 830 840 850
pF1KB8 LMAKALQECPNSGILWSEAIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRKIT
.. :...
NP_001 IYELAISQPRLDMPEVLWKSYIDFEIEQEETERTRNLYRRLLQRTQHVKVWISFAQFELS
650 660 670 680 690 700
>>NP_057736 (OMIM: 610952) crooked neck-like protein 1 i (848 aa)
initn: 196 init1: 106 opt: 203 Z-score: 170.1 bits: 42.7 E(85289): 0.0098
Smith-Waterman score: 302; 22.8% identity (50.8% similar) in 518 aa overlap (335-806:169-669)
310 320 330 340 350 360
pF1KB8 NPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEA-ARLQPGDTAKAVVA
: . :: : .: :..: ::. ..
NP_057 VSSQSRFLASVPGTGVQRSTAADMAASTAAGKQRIPKVAKVKNKAPAEVQI--TAEQLLR
140 150 160 170 180 190
370 380 390 400 410
pF1KB8 QA----VRHLPQSVRIYIRAAELETDIRAKKRV-----LRKALEHVPNSVRLWKAAVELE
.: .. :: . : : .: . .:: .:: . : .. . :.
NP_057 EAKERELELLPPPPQQKITDEEELNDYKLRKRKTFEDNIRKNRTVISNWIKYAQWEESLK
200 210 220 230 240 250
420 430 440 450 460 470
pF1KB8 EPEDARIMLSRAVECCPTSVELWLALARLET----YENARKVLNKARENIPTDRHIWITA
: . :: . ::.. .. ::: :..: ..::.. ..: ..: ..:
NP_057 EIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKY
260 270 280 290 300 310
480 490 500 510 520
pF1KB8 AKLEEANGNTQMVEKIIDRAIT---SLRANGVEINREQWIQDAEECDRAGSVATCQAVMR
. .:: ::. ......: . .: :: : . : ::: .. :
NP_057 TYMEEMLGNVAGARQVFERWMEWQPEEQAWHSYINFELRYK---EVDRARTI-----YER
320 330 340 350 360
530 540 550 560 570 580
pF1KB8 AVIGIGIEEEDRKHTWMEDADSCVAHNALECARAIYAYALQVFPSK---KSVWLRAAYFE
:. . : :. :.. : : . :: .: :.. : .. . ... : ::
NP_057 FVL----VHPDVKN-WIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLYVAFAKFE
370 380 390 400 410 420
590 600 610 620 630
pF1KB8 KNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLA--GDVPAARSILALA--FQ----
.:. : .... . :. . : .. :. . . :: . ..:.. ::
NP_057 ENQKEFERVRVIYKYALDRISKQDAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEE
430 440 450 460 470 480
640 650 660 670 680
pF1KB8 --ANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTA---RVFMKSVKLEWV----
:::.. . :. ..: . : : .:.. .: ...: : . . . : :.
NP_057 VKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYL-WINYAL
490 500 510 520 530 540
690 700 710 720 730
pF1KB8 ------QDNIRAAQ--DLCEEALRHYE-DFPKLWMMKGQIEEQKEMMEKAREAYNQGLKK
.: :. : . : . : . : :.:.. .:.: ... . ::.: . .. :
NP_057 YEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSIGK
550 560 570 580 590 600
740 750 760 770 780 790
pF1KB8 CPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANT
::.. :. . .:: .. .. : : . :: .:.: :.. ..:: : . : .
NP_057 CPKNK-LFKVYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIDRARA
610 620 630 640 650 660
800 810 820 830 840 850
pF1KB8 LMAKALQECPNSGILWSEAIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRKIT
.. :...
NP_057 IYELAISQPRLDMPEVLWKSYIDFEIEQEETERTRNLYRRLLQRTQHVKVWISFAQFELS
670 680 690 700 710 720
941 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 16:32:30 2016 done: Sat Nov 5 16:32:32 2016
Total Scan time: 13.110 Total Display time: 0.120
Function used was FASTA [36.3.4 Apr, 2011]