Result of FASTA (ccds) for
pF1KB8571
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8571, 573 aa
1>>>pF1KB8571 573 - 573 aa - 573 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.8444+/-0.000959; mu= 12.2583+/- 0.058
mean_var=110.7958+/-21.464, 0's: 0 Z-trim(108.6): 13 B-trim: 97 in 1/51
Lambda= 0.121846
statistics sampled from 10300 (10304) to 10300 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.692), E-opt: 0.2 (0.317), width: 16
Scan time: 3.670
The best scores are: opt bits E(32554)
CCDS42377.1 C17orf80 gene_id:55028|Hs108|chr17 ( 573) 3847 687.3 1.4e-197
CCDS74145.1 C17orf80 gene_id:55028|Hs108|chr17 ( 547) 3605 644.7 8.5e-185
CCDS45767.1 C17orf80 gene_id:55028|Hs108|chr17 ( 583) 3334 597.1 2e-170
CCDS11694.1 C17orf80 gene_id:55028|Hs108|chr17 ( 609) 3334 597.1 2e-170
>>CCDS42377.1 C17orf80 gene_id:55028|Hs108|chr17 (573 aa)
initn: 3847 init1: 3847 opt: 3847 Z-score: 3660.8 bits: 687.3 E(32554): 1.4e-197
Smith-Waterman score: 3847; 99.7% identity (99.8% similar) in 573 aa overlap (1-573:1-573)
10 20 30 40 50 60
pF1KB8 MSDNPPRMEVCPYCKKPFKRLKSHLPYCKMIGSTIPTDQKVYQSKPATLPRAKKMKGPIK
:::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::
CCDS42 MSDNPPRMEVCPYCKKPFKRLKSHLPYCKMIGPTIPTDQKVYQSKPATLPRAKKMKGPIK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 DLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 DLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 KMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 KMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 SLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 SLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 RVRTLLSNERDSKGRDHLSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 RVRTLLSNERDSKGRDHLSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 TLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIPRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 TLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIPRE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 TTYQFHSVSQSSSQSLASLATTFLQEKKAEAQNHNCVPDVKALMESPEGQLSLEPKSDSQ
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
CCDS42 TTYQFHSVSQSSSQSLASLATTFLQEKKAEAQNHHCVPDVKALMESPEGQLSLEPKSDSQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 FQASHTGCQSPLCSAQRHTPQSPFTNHAAAAGRKTLRSCMGLEWFPELYPGYLGLGVLPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 FQASHTGCQSPLCSAQRHTPQSPFTNHAAAAGRKTLRSCMGLEWFPELYPGYLGLGVLPG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 KPQCWNAMTQKPQLISPQGERLSQGWIRCNTTIRKSGFGGITMLFTGYFVLCCSWSFRRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 KPQCWNAMTQKPQLISPQGERLSQGWIRCNTTIRKSGFGGITMLFTGYFVLCCSWSFRRL
490 500 510 520 530 540
550 560 570
pF1KB8 KKLCRPLPWKSTVPPCIGVAKTTGDCRSKTCLD
:::::::::::::::::::::::::::::::::
CCDS42 KKLCRPLPWKSTVPPCIGVAKTTGDCRSKTCLD
550 560 570
>>CCDS74145.1 C17orf80 gene_id:55028|Hs108|chr17 (547 aa)
initn: 3605 init1: 3605 opt: 3605 Z-score: 3431.2 bits: 644.7 E(32554): 8.5e-185
Smith-Waterman score: 3605; 99.6% identity (99.8% similar) in 541 aa overlap (1-541:1-541)
10 20 30 40 50 60
pF1KB8 MSDNPPRMEVCPYCKKPFKRLKSHLPYCKMIGSTIPTDQKVYQSKPATLPRAKKMKGPIK
:::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::
CCDS74 MSDNPPRMEVCPYCKKPFKRLKSHLPYCKMIGPTIPTDQKVYQSKPATLPRAKKMKGPIK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 DLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 DLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 KMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 KMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 SLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 SLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 RVRTLLSNERDSKGRDHLSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 RVRTLLSNERDSKGRDHLSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 TLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIPRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 TLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIPRE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 TTYQFHSVSQSSSQSLASLATTFLQEKKAEAQNHNCVPDVKALMESPEGQLSLEPKSDSQ
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
CCDS74 TTYQFHSVSQSSSQSLASLATTFLQEKKAEAQNHHCVPDVKALMESPEGQLSLEPKSDSQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 FQASHTGCQSPLCSAQRHTPQSPFTNHAAAAGRKTLRSCMGLEWFPELYPGYLGLGVLPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 FQASHTGCQSPLCSAQRHTPQSPFTNHAAAAGRKTLRSCMGLEWFPELYPGYLGLGVLPG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 KPQCWNAMTQKPQLISPQGERLSQGWIRCNTTIRKSGFGGITMLFTGYFVLCCSWSFRRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 KPQCWNAMTQKPQLISPQGERLSQGWIRCNTTIRKSGFGGITMLFTGYFVLCCSWSFRRL
490 500 510 520 530 540
550 560 570
pF1KB8 KKLCRPLPWKSTVPPCIGVAKTTGDCRSKTCLD
:
CCDS74 KLQRWRK
>>CCDS45767.1 C17orf80 gene_id:55028|Hs108|chr17 (583 aa)
initn: 3332 init1: 3332 opt: 3334 Z-score: 3173.3 bits: 597.1 E(32554): 2e-170
Smith-Waterman score: 3523; 93.4% identity (93.6% similar) in 577 aa overlap (1-541:1-577)
10 20 30 40 50 60
pF1KB8 MSDNPPRMEVCPYCKKPFKRLKSHLPYCKMIGSTIPTDQKVYQSKPATLPRAKKMKGPIK
:::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::
CCDS45 MSDNPPRMEVCPYCKKPFKRLKSHLPYCKMIGPTIPTDQKVYQSKPATLPRAKKMKGPIK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 DLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 DLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 KMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 KMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 SLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 SLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 RVRTLLSNERDSKGRDHLSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 RVRTLLSNERDSKGRDHLSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 TLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIPRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 TLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIPRE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 TTYQFHSVSQSSSQSLASLATTFLQEKKAEAQNHNCVPDVKALMESPEGQLSLEPKSDSQ
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
CCDS45 TTYQFHSVSQSSSQSLASLATTFLQEKKAEAQNHHCVPDVKALMESPEGQLSLEPKSDSQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 FQASHTGCQSPLCSAQRHTPQSPFTNHAAAAGRKTLRSCMGLEWFPELYPGYLGLGVLPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 FQASHTGCQSPLCSAQRHTPQSPFTNHAAAAGRKTLRSCMGLEWFPELYPGYLGLGVLPG
430 440 450 460 470 480
490 500
pF1KB8 KPQCWNAMTQKPQLISPQGERLSQ------------------------------------
::::::::::::::::::::::::
CCDS45 KPQCWNAMTQKPQLISPQGERLSQVSLLERSSTHIRSLEPPAGLTTSNFSLMRLLGAVQK
490 500 510 520 530 540
510 520 530 540 550 560
pF1KB8 GWIRCNTTIRKSGFGGITMLFTGYFVLCCSWSFRRLKKLCRPLPWKSTVPPCIGVAKTTG
:::::::::::::::::::::::::::::::::::::
CCDS45 GWIRCNTTIRKSGFGGITMLFTGYFVLCCSWSFRRLKLQRWRK
550 560 570 580
570
pF1KB8 DCRSKTCLD
>>CCDS11694.1 C17orf80 gene_id:55028|Hs108|chr17 (609 aa)
initn: 3332 init1: 3332 opt: 3334 Z-score: 3173.0 bits: 597.1 E(32554): 2e-170
Smith-Waterman score: 3734; 93.7% identity (93.9% similar) in 605 aa overlap (1-569:1-605)
10 20 30 40 50 60
pF1KB8 MSDNPPRMEVCPYCKKPFKRLKSHLPYCKMIGSTIPTDQKVYQSKPATLPRAKKMKGPIK
:::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::
CCDS11 MSDNPPRMEVCPYCKKPFKRLKSHLPYCKMIGPTIPTDQKVYQSKPATLPRAKKMKGPIK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 DLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAATTKADKDIKNPIQPSF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 KMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 KMLKNTKPMTTFQEETKAQFYASEKTSPKRELAKDLPKSGESRCNPSEAGASLLVGSIEP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 SLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SLSNQDRKYSSTLPNDVQTTSGDLKLDKIDPQRQELLVKLLDVPTGDCHISPKNVSDGVK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 RVRTLLSNERDSKGRDHLSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 RVRTLLSNERDSKGRDHLSGVPTDVTVTETPEKNTESLILSLKMSSLGKIQVMEKQEKGL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 TLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIPRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TLGVETCGSKGNAEKSMSATEKQERTVMSHGCENFNTRDSVTGKESQGERPHLSLFIPRE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 TTYQFHSVSQSSSQSLASLATTFLQEKKAEAQNHNCVPDVKALMESPEGQLSLEPKSDSQ
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
CCDS11 TTYQFHSVSQSSSQSLASLATTFLQEKKAEAQNHHCVPDVKALMESPEGQLSLEPKSDSQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 FQASHTGCQSPLCSAQRHTPQSPFTNHAAAAGRKTLRSCMGLEWFPELYPGYLGLGVLPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 FQASHTGCQSPLCSAQRHTPQSPFTNHAAAAGRKTLRSCMGLEWFPELYPGYLGLGVLPG
430 440 450 460 470 480
490 500
pF1KB8 KPQCWNAMTQKPQLISPQGERLSQ------------------------------------
::::::::::::::::::::::::
CCDS11 KPQCWNAMTQKPQLISPQGERLSQVSLLERSSTHIRSLEPPAGLTTSNFSLMRLLGAVQK
490 500 510 520 530 540
510 520 530 540 550 560
pF1KB8 GWIRCNTTIRKSGFGGITMLFTGYFVLCCSWSFRRLKKLCRPLPWKSTVPPCIGVAKTTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 GWIRCNTTIRKSGFGGITMLFTGYFVLCCSWSFRRLKKLCRPLPWKSTVPPCIGVAKTTG
550 560 570 580 590 600
570
pF1KB8 DCRSKTCLD
:::::
CCDS11 DCRSKTCLD
573 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 13:16:49 2016 done: Fri Nov 4 13:16:50 2016
Total Scan time: 3.670 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]