FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8582, 749 aa
  1>>>pF1KB8582 749 - 749 aa - 749 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.5180+/-0.00101; mu= 10.8686+/- 0.061
 mean_var=144.9667+/-28.525, 0's: 0 Z-trim(109.8): 15  B-trim: 0 in 0/51
 Lambda= 0.106522
 statistics sampled from 11136 (11141) to 11136 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.686), E-opt: 0.2 (0.342), width:  16
 Scan time:  2.910

The best scores are:                                      opt bits E(32554)
CCDS3.1 NOC2L gene_id:26155|Hs108|chr1             ( 749) 4934 770.4       0


>>CCDS3.1 NOC2L gene_id:26155|Hs108|chr1                  (749 aa)
 initn: 4934 init1: 4934 opt: 4934  Z-score: 4105.9  bits: 770.4 E(32554):    0
Smith-Waterman score: 4934; 99.6% identity (100.0% similar) in 749 aa overlap (1-749:1-749)

               10        20        30        40        50        60
pF1KB8 MAAAGSRKRRLAELTVDEFLASGFDSESESESENSPQAETREAREAARSPDKPGGSPSAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS3. MAAAGSRKRRLAELTVDEFLASGFDSESESESENSPQAETREAREAARSPDKPGGSPSAS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 RRKGRASEHKDQLSRLKDRDPEFYKFLQENDQSLLNFSDSDSSEEEEGPFHSLPDVLEEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS3. RRKGRASEHKDQLSRLKDRDPEFYKFLQENDQSLLNFSDSDSSEEEEGPFHSLPDVLEEA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 SEEEDGAEEGEDGDRVPRGLKGKKNSVPVTVAMVERWKQAAKQRLTPKLFHEVVQAFQAA
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::
CCDS3. SEEEDGAEEGEDGDRVPRGLKGKKNSVPVTVAMVERWKQAAKQRLTPKLFHEVVQAFRAA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 VATTRGDQESAEANKFQVTDSAAFNALVTFCIRDLIGCLQKLLFGKVAKDSSRMLQPSSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS3. VATTRGDQESAEANKFQVTDSAAFNALVTFCIRDLIGCLQKLLFGKVAKDSSRMLQPSSS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 PLWGKLRVDIKAYLGSAIQLVSCLSETTVLAAVLRHISVLVPCFLTFPKQCRMLLKRMVV
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
CCDS3. PLWGKLRVDIKAYLGSAIQLVSCLSETTVLAAVLRHISVLVPCFLTFPKQCRMLLKRMVI
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 VWSTGEESLRVLAFLVLSRVCRHKKDTFLGPVLKQMYITYVRNCEFTSPGALPFISFMQW
       ::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
CCDS3. VWSTGEESLRVLAFLVLSRVCRHKKDTFLGPVLKQMYITYVRNCKFTSPGALPFISFMQW
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB8 TLTELLALEPGVAYQHAFLYIRQLAIHLRNAMTTRKKETYQSVYNWQYVHCLFLWCRVLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS3. TLTELLALEPGVAYQHAFLYIRQLAIHLRNAMTTRKKETYQSVYNWQYVHCLFLWCRVLS
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB8 TAGPSEALQPLVYPLAQVIIGCIKLIPTARFYPLRMHCIRALTLLSGSSGAFIPVLPFIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS3. TAGPSEALQPLVYPLAQVIIGCIKLIPTARFYPLRMHCIRALTLLSGSSGAFIPVLPFIL
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB8 EMFQQVDFNRKPGRMSSKPINFSVILKLSNVNLQEKAYRDGLVEQLYDLTLEYLHSQAHC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS3. EMFQQVDFNRKPGRMSSKPINFSVILKLSNVNLQEKAYRDGLVEQLYDLTLEYLHSQAHC
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB8 IGFPELVLPVVLQLKSFLRECKVANYCRQVQQLLGKVQENSAYICSRRQRVSFGVSEQQA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS3. IGFPELVLPVVLQLKSFLRECKVANYCRQVQQLLGKVQENSAYICSRRQRVSFGVSEQQA
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB8 VEAWEKLTREEGTPLTLYYSHWRKLRDREIQLEISGKERLEDLNFPEIKRRKMADRKDED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS3. VEAWEKLTREEGTPLTLYYSHWRKLRDREIQLEISGKERLEDLNFPEIKRRKMADRKDED
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB8 RKQFKDLFDLNSSEEDDTEGFSERGILRPLSTRHGVEDDEEDEEEGEEDSSNSEDGDPDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS3. RKQFKDLFDLNSSEEDDTEGFSERGILRPLSTRHGVEDDEEDEEEGEEDSSNSEDGDPDA
              670       680       690       700       710       720

              730       740         
pF1KB8 EAGLAPGELQQLAQGPEDELEDLQLSEDD
       :::::::::::::::::::::::::::::
CCDS3. EAGLAPGELQQLAQGPEDELEDLQLSEDD
              730       740         




749 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 13:31:25 2016 done: Fri Nov  4 13:31:25 2016
 Total Scan time:  2.910 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]