Result of FASTA (omim) for
pF1KB8589
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8589, 358 aa
1>>>pF1KB8589 358 - 358 aa - 358 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.9836+/-0.00037; mu= 4.4669+/- 0.023
mean_var=173.1236+/-37.631, 0's: 0 Z-trim(118.5): 60 B-trim: 1566 in 1/54
Lambda= 0.097476
statistics sampled from 31539 (31605) to 31539 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.731), E-opt: 0.2 (0.371), width: 16
Scan time: 7.850
The best scores are: opt bits E(85289)
XP_016866826 (OMIM: 612137) PREDICTED: E3 ubiquiti ( 358) 2401 349.6 6.1e-96
XP_006715634 (OMIM: 612137) PREDICTED: E3 ubiquiti ( 358) 2401 349.6 6.1e-96
NP_112225 (OMIM: 612137) E3 ubiquitin-protein liga ( 358) 2401 349.6 6.1e-96
XP_016866827 (OMIM: 612137) PREDICTED: E3 ubiquiti ( 358) 2401 349.6 6.1e-96
XP_011534464 (OMIM: 612137) PREDICTED: E3 ubiquiti ( 358) 2401 349.6 6.1e-96
XP_011534463 (OMIM: 612137) PREDICTED: E3 ubiquiti ( 358) 2401 349.6 6.1e-96
NP_001229774 (OMIM: 612137) E3 ubiquitin-protein l ( 358) 2401 349.6 6.1e-96
NP_001229776 (OMIM: 612137) E3 ubiquitin-protein l ( 358) 2401 349.6 6.1e-96
XP_016866828 (OMIM: 612137) PREDICTED: E3 ubiquiti ( 358) 2401 349.6 6.1e-96
NP_001229773 (OMIM: 612137) E3 ubiquitin-protein l ( 358) 2401 349.6 6.1e-96
XP_016866829 (OMIM: 612137) PREDICTED: E3 ubiquiti ( 358) 2401 349.6 6.1e-96
NP_001229777 (OMIM: 612137) E3 ubiquitin-protein l ( 358) 2401 349.6 6.1e-96
NP_001229775 (OMIM: 612137) E3 ubiquitin-protein l ( 358) 2401 349.6 6.1e-96
XP_016866832 (OMIM: 612137) PREDICTED: E3 ubiquiti ( 358) 2401 349.6 6.1e-96
XP_011534465 (OMIM: 612137) PREDICTED: E3 ubiquiti ( 358) 2401 349.6 6.1e-96
XP_016866831 (OMIM: 612137) PREDICTED: E3 ubiquiti ( 358) 2401 349.6 6.1e-96
XP_016866830 (OMIM: 612137) PREDICTED: E3 ubiquiti ( 358) 2401 349.6 6.1e-96
NP_001229781 (OMIM: 612137) E3 ubiquitin-protein l ( 358) 2401 349.6 6.1e-96
XP_011534466 (OMIM: 612137) PREDICTED: E3 ubiquiti ( 358) 2401 349.6 6.1e-96
XP_016866825 (OMIM: 612137) PREDICTED: E3 ubiquiti ( 359) 2401 349.7 6.1e-96
NP_001229780 (OMIM: 612137) E3 ubiquitin-protein l ( 359) 2401 349.7 6.1e-96
NP_001229779 (OMIM: 612137) E3 ubiquitin-protein l ( 359) 2401 349.7 6.1e-96
NP_001229778 (OMIM: 612137) E3 ubiquitin-protein l ( 359) 2401 349.7 6.1e-96
>>XP_016866826 (OMIM: 612137) PREDICTED: E3 ubiquitin-pr (358 aa)
initn: 2401 init1: 2401 opt: 2401 Z-score: 1843.5 bits: 349.6 E(85289): 6.1e-96
Smith-Waterman score: 2401; 100.0% identity (100.0% similar) in 358 aa overlap (1-358:1-358)
10 20 30 40 50 60
pF1KB8 MAGCGEIDHSINMLPTNRKANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAGCGEIDHSINMLPTNRKANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KGASWLGKRCALCRQEIPEDFLDKPTLLSPEELKAASRGNGEYAWYYEGRNGWWQYDERT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KGASWLGKRCALCRQEIPEDFLDKPTLLSPEELKAASRGNGEYAWYYEGRNGWWQYDERT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 SRELEDAFSKGKKNTEMLIAGFLYVADLENMVQYRRNEHGRRRKIKRDIIDIPKKGVAGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SRELEDAFSKGKKNTEMLIAGFLYVADLENMVQYRRNEHGRRRKIKRDIIDIPKKGVAGL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 RLDCDANTVNLARESSADGADSVSAQSGASVQPLVSSVRPLTSVDGQLTSPATPSPDAST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLDCDANTVNLARESSADGADSVSAQSGASVQPLVSSVRPLTSVDGQLTSPATPSPDAST
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 SLEDSFAHLQLSGDNTAERSHRGEGEEDHESPSSGRVPAPDTSIEETESDASSDSEDVSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLEDSFAHLQLSGDNTAERSHRGEGEEDHESPSSGRVPAPDTSIEETESDASSDSEDVSA
250 260 270 280 290 300
310 320 330 340 350
pF1KB8 VVAQHSLTQQRLLVSNANQTVPDRSDRSGTDRSVAGGGTVSVSVRSRRPDGQCTVTEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VVAQHSLTQQRLLVSNANQTVPDRSDRSGTDRSVAGGGTVSVSVRSRRPDGQCTVTEV
310 320 330 340 350
>>XP_006715634 (OMIM: 612137) PREDICTED: E3 ubiquitin-pr (358 aa)
initn: 2401 init1: 2401 opt: 2401 Z-score: 1843.5 bits: 349.6 E(85289): 6.1e-96
Smith-Waterman score: 2401; 100.0% identity (100.0% similar) in 358 aa overlap (1-358:1-358)
10 20 30 40 50 60
pF1KB8 MAGCGEIDHSINMLPTNRKANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MAGCGEIDHSINMLPTNRKANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KGASWLGKRCALCRQEIPEDFLDKPTLLSPEELKAASRGNGEYAWYYEGRNGWWQYDERT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KGASWLGKRCALCRQEIPEDFLDKPTLLSPEELKAASRGNGEYAWYYEGRNGWWQYDERT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 SRELEDAFSKGKKNTEMLIAGFLYVADLENMVQYRRNEHGRRRKIKRDIIDIPKKGVAGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SRELEDAFSKGKKNTEMLIAGFLYVADLENMVQYRRNEHGRRRKIKRDIIDIPKKGVAGL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 RLDCDANTVNLARESSADGADSVSAQSGASVQPLVSSVRPLTSVDGQLTSPATPSPDAST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RLDCDANTVNLARESSADGADSVSAQSGASVQPLVSSVRPLTSVDGQLTSPATPSPDAST
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 SLEDSFAHLQLSGDNTAERSHRGEGEEDHESPSSGRVPAPDTSIEETESDASSDSEDVSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SLEDSFAHLQLSGDNTAERSHRGEGEEDHESPSSGRVPAPDTSIEETESDASSDSEDVSA
250 260 270 280 290 300
310 320 330 340 350
pF1KB8 VVAQHSLTQQRLLVSNANQTVPDRSDRSGTDRSVAGGGTVSVSVRSRRPDGQCTVTEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VVAQHSLTQQRLLVSNANQTVPDRSDRSGTDRSVAGGGTVSVSVRSRRPDGQCTVTEV
310 320 330 340 350
>>NP_112225 (OMIM: 612137) E3 ubiquitin-protein ligase R (358 aa)
initn: 2401 init1: 2401 opt: 2401 Z-score: 1843.5 bits: 349.6 E(85289): 6.1e-96
Smith-Waterman score: 2401; 100.0% identity (100.0% similar) in 358 aa overlap (1-358:1-358)
10 20 30 40 50 60
pF1KB8 MAGCGEIDHSINMLPTNRKANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 MAGCGEIDHSINMLPTNRKANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KGASWLGKRCALCRQEIPEDFLDKPTLLSPEELKAASRGNGEYAWYYEGRNGWWQYDERT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 KGASWLGKRCALCRQEIPEDFLDKPTLLSPEELKAASRGNGEYAWYYEGRNGWWQYDERT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 SRELEDAFSKGKKNTEMLIAGFLYVADLENMVQYRRNEHGRRRKIKRDIIDIPKKGVAGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 SRELEDAFSKGKKNTEMLIAGFLYVADLENMVQYRRNEHGRRRKIKRDIIDIPKKGVAGL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 RLDCDANTVNLARESSADGADSVSAQSGASVQPLVSSVRPLTSVDGQLTSPATPSPDAST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 RLDCDANTVNLARESSADGADSVSAQSGASVQPLVSSVRPLTSVDGQLTSPATPSPDAST
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 SLEDSFAHLQLSGDNTAERSHRGEGEEDHESPSSGRVPAPDTSIEETESDASSDSEDVSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 SLEDSFAHLQLSGDNTAERSHRGEGEEDHESPSSGRVPAPDTSIEETESDASSDSEDVSA
250 260 270 280 290 300
310 320 330 340 350
pF1KB8 VVAQHSLTQQRLLVSNANQTVPDRSDRSGTDRSVAGGGTVSVSVRSRRPDGQCTVTEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 VVAQHSLTQQRLLVSNANQTVPDRSDRSGTDRSVAGGGTVSVSVRSRRPDGQCTVTEV
310 320 330 340 350
>>XP_016866827 (OMIM: 612137) PREDICTED: E3 ubiquitin-pr (358 aa)
initn: 2401 init1: 2401 opt: 2401 Z-score: 1843.5 bits: 349.6 E(85289): 6.1e-96
Smith-Waterman score: 2401; 100.0% identity (100.0% similar) in 358 aa overlap (1-358:1-358)
10 20 30 40 50 60
pF1KB8 MAGCGEIDHSINMLPTNRKANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAGCGEIDHSINMLPTNRKANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KGASWLGKRCALCRQEIPEDFLDKPTLLSPEELKAASRGNGEYAWYYEGRNGWWQYDERT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KGASWLGKRCALCRQEIPEDFLDKPTLLSPEELKAASRGNGEYAWYYEGRNGWWQYDERT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 SRELEDAFSKGKKNTEMLIAGFLYVADLENMVQYRRNEHGRRRKIKRDIIDIPKKGVAGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SRELEDAFSKGKKNTEMLIAGFLYVADLENMVQYRRNEHGRRRKIKRDIIDIPKKGVAGL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 RLDCDANTVNLARESSADGADSVSAQSGASVQPLVSSVRPLTSVDGQLTSPATPSPDAST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLDCDANTVNLARESSADGADSVSAQSGASVQPLVSSVRPLTSVDGQLTSPATPSPDAST
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 SLEDSFAHLQLSGDNTAERSHRGEGEEDHESPSSGRVPAPDTSIEETESDASSDSEDVSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLEDSFAHLQLSGDNTAERSHRGEGEEDHESPSSGRVPAPDTSIEETESDASSDSEDVSA
250 260 270 280 290 300
310 320 330 340 350
pF1KB8 VVAQHSLTQQRLLVSNANQTVPDRSDRSGTDRSVAGGGTVSVSVRSRRPDGQCTVTEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VVAQHSLTQQRLLVSNANQTVPDRSDRSGTDRSVAGGGTVSVSVRSRRPDGQCTVTEV
310 320 330 340 350
>>XP_011534464 (OMIM: 612137) PREDICTED: E3 ubiquitin-pr (358 aa)
initn: 2401 init1: 2401 opt: 2401 Z-score: 1843.5 bits: 349.6 E(85289): 6.1e-96
Smith-Waterman score: 2401; 100.0% identity (100.0% similar) in 358 aa overlap (1-358:1-358)
10 20 30 40 50 60
pF1KB8 MAGCGEIDHSINMLPTNRKANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAGCGEIDHSINMLPTNRKANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KGASWLGKRCALCRQEIPEDFLDKPTLLSPEELKAASRGNGEYAWYYEGRNGWWQYDERT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KGASWLGKRCALCRQEIPEDFLDKPTLLSPEELKAASRGNGEYAWYYEGRNGWWQYDERT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 SRELEDAFSKGKKNTEMLIAGFLYVADLENMVQYRRNEHGRRRKIKRDIIDIPKKGVAGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SRELEDAFSKGKKNTEMLIAGFLYVADLENMVQYRRNEHGRRRKIKRDIIDIPKKGVAGL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 RLDCDANTVNLARESSADGADSVSAQSGASVQPLVSSVRPLTSVDGQLTSPATPSPDAST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RLDCDANTVNLARESSADGADSVSAQSGASVQPLVSSVRPLTSVDGQLTSPATPSPDAST
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 SLEDSFAHLQLSGDNTAERSHRGEGEEDHESPSSGRVPAPDTSIEETESDASSDSEDVSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLEDSFAHLQLSGDNTAERSHRGEGEEDHESPSSGRVPAPDTSIEETESDASSDSEDVSA
250 260 270 280 290 300
310 320 330 340 350
pF1KB8 VVAQHSLTQQRLLVSNANQTVPDRSDRSGTDRSVAGGGTVSVSVRSRRPDGQCTVTEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VVAQHSLTQQRLLVSNANQTVPDRSDRSGTDRSVAGGGTVSVSVRSRRPDGQCTVTEV
310 320 330 340 350
>>XP_011534463 (OMIM: 612137) PREDICTED: E3 ubiquitin-pr (358 aa)
initn: 2401 init1: 2401 opt: 2401 Z-score: 1843.5 bits: 349.6 E(85289): 6.1e-96
Smith-Waterman score: 2401; 100.0% identity (100.0% similar) in 358 aa overlap (1-358:1-358)
10 20 30 40 50 60
pF1KB8 MAGCGEIDHSINMLPTNRKANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAGCGEIDHSINMLPTNRKANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KGASWLGKRCALCRQEIPEDFLDKPTLLSPEELKAASRGNGEYAWYYEGRNGWWQYDERT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KGASWLGKRCALCRQEIPEDFLDKPTLLSPEELKAASRGNGEYAWYYEGRNGWWQYDERT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 SRELEDAFSKGKKNTEMLIAGFLYVADLENMVQYRRNEHGRRRKIKRDIIDIPKKGVAGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SRELEDAFSKGKKNTEMLIAGFLYVADLENMVQYRRNEHGRRRKIKRDIIDIPKKGVAGL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 RLDCDANTVNLARESSADGADSVSAQSGASVQPLVSSVRPLTSVDGQLTSPATPSPDAST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RLDCDANTVNLARESSADGADSVSAQSGASVQPLVSSVRPLTSVDGQLTSPATPSPDAST
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 SLEDSFAHLQLSGDNTAERSHRGEGEEDHESPSSGRVPAPDTSIEETESDASSDSEDVSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLEDSFAHLQLSGDNTAERSHRGEGEEDHESPSSGRVPAPDTSIEETESDASSDSEDVSA
250 260 270 280 290 300
310 320 330 340 350
pF1KB8 VVAQHSLTQQRLLVSNANQTVPDRSDRSGTDRSVAGGGTVSVSVRSRRPDGQCTVTEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VVAQHSLTQQRLLVSNANQTVPDRSDRSGTDRSVAGGGTVSVSVRSRRPDGQCTVTEV
310 320 330 340 350
>>NP_001229774 (OMIM: 612137) E3 ubiquitin-protein ligas (358 aa)
initn: 2401 init1: 2401 opt: 2401 Z-score: 1843.5 bits: 349.6 E(85289): 6.1e-96
Smith-Waterman score: 2401; 100.0% identity (100.0% similar) in 358 aa overlap (1-358:1-358)
10 20 30 40 50 60
pF1KB8 MAGCGEIDHSINMLPTNRKANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAGCGEIDHSINMLPTNRKANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KGASWLGKRCALCRQEIPEDFLDKPTLLSPEELKAASRGNGEYAWYYEGRNGWWQYDERT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGASWLGKRCALCRQEIPEDFLDKPTLLSPEELKAASRGNGEYAWYYEGRNGWWQYDERT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 SRELEDAFSKGKKNTEMLIAGFLYVADLENMVQYRRNEHGRRRKIKRDIIDIPKKGVAGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SRELEDAFSKGKKNTEMLIAGFLYVADLENMVQYRRNEHGRRRKIKRDIIDIPKKGVAGL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 RLDCDANTVNLARESSADGADSVSAQSGASVQPLVSSVRPLTSVDGQLTSPATPSPDAST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RLDCDANTVNLARESSADGADSVSAQSGASVQPLVSSVRPLTSVDGQLTSPATPSPDAST
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 SLEDSFAHLQLSGDNTAERSHRGEGEEDHESPSSGRVPAPDTSIEETESDASSDSEDVSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLEDSFAHLQLSGDNTAERSHRGEGEEDHESPSSGRVPAPDTSIEETESDASSDSEDVSA
250 260 270 280 290 300
310 320 330 340 350
pF1KB8 VVAQHSLTQQRLLVSNANQTVPDRSDRSGTDRSVAGGGTVSVSVRSRRPDGQCTVTEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVAQHSLTQQRLLVSNANQTVPDRSDRSGTDRSVAGGGTVSVSVRSRRPDGQCTVTEV
310 320 330 340 350
>>NP_001229776 (OMIM: 612137) E3 ubiquitin-protein ligas (358 aa)
initn: 2401 init1: 2401 opt: 2401 Z-score: 1843.5 bits: 349.6 E(85289): 6.1e-96
Smith-Waterman score: 2401; 100.0% identity (100.0% similar) in 358 aa overlap (1-358:1-358)
10 20 30 40 50 60
pF1KB8 MAGCGEIDHSINMLPTNRKANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAGCGEIDHSINMLPTNRKANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KGASWLGKRCALCRQEIPEDFLDKPTLLSPEELKAASRGNGEYAWYYEGRNGWWQYDERT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGASWLGKRCALCRQEIPEDFLDKPTLLSPEELKAASRGNGEYAWYYEGRNGWWQYDERT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 SRELEDAFSKGKKNTEMLIAGFLYVADLENMVQYRRNEHGRRRKIKRDIIDIPKKGVAGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SRELEDAFSKGKKNTEMLIAGFLYVADLENMVQYRRNEHGRRRKIKRDIIDIPKKGVAGL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 RLDCDANTVNLARESSADGADSVSAQSGASVQPLVSSVRPLTSVDGQLTSPATPSPDAST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RLDCDANTVNLARESSADGADSVSAQSGASVQPLVSSVRPLTSVDGQLTSPATPSPDAST
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 SLEDSFAHLQLSGDNTAERSHRGEGEEDHESPSSGRVPAPDTSIEETESDASSDSEDVSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLEDSFAHLQLSGDNTAERSHRGEGEEDHESPSSGRVPAPDTSIEETESDASSDSEDVSA
250 260 270 280 290 300
310 320 330 340 350
pF1KB8 VVAQHSLTQQRLLVSNANQTVPDRSDRSGTDRSVAGGGTVSVSVRSRRPDGQCTVTEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVAQHSLTQQRLLVSNANQTVPDRSDRSGTDRSVAGGGTVSVSVRSRRPDGQCTVTEV
310 320 330 340 350
>>XP_016866828 (OMIM: 612137) PREDICTED: E3 ubiquitin-pr (358 aa)
initn: 2401 init1: 2401 opt: 2401 Z-score: 1843.5 bits: 349.6 E(85289): 6.1e-96
Smith-Waterman score: 2401; 100.0% identity (100.0% similar) in 358 aa overlap (1-358:1-358)
10 20 30 40 50 60
pF1KB8 MAGCGEIDHSINMLPTNRKANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAGCGEIDHSINMLPTNRKANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KGASWLGKRCALCRQEIPEDFLDKPTLLSPEELKAASRGNGEYAWYYEGRNGWWQYDERT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KGASWLGKRCALCRQEIPEDFLDKPTLLSPEELKAASRGNGEYAWYYEGRNGWWQYDERT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 SRELEDAFSKGKKNTEMLIAGFLYVADLENMVQYRRNEHGRRRKIKRDIIDIPKKGVAGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SRELEDAFSKGKKNTEMLIAGFLYVADLENMVQYRRNEHGRRRKIKRDIIDIPKKGVAGL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 RLDCDANTVNLARESSADGADSVSAQSGASVQPLVSSVRPLTSVDGQLTSPATPSPDAST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLDCDANTVNLARESSADGADSVSAQSGASVQPLVSSVRPLTSVDGQLTSPATPSPDAST
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 SLEDSFAHLQLSGDNTAERSHRGEGEEDHESPSSGRVPAPDTSIEETESDASSDSEDVSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLEDSFAHLQLSGDNTAERSHRGEGEEDHESPSSGRVPAPDTSIEETESDASSDSEDVSA
250 260 270 280 290 300
310 320 330 340 350
pF1KB8 VVAQHSLTQQRLLVSNANQTVPDRSDRSGTDRSVAGGGTVSVSVRSRRPDGQCTVTEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VVAQHSLTQQRLLVSNANQTVPDRSDRSGTDRSVAGGGTVSVSVRSRRPDGQCTVTEV
310 320 330 340 350
>>NP_001229773 (OMIM: 612137) E3 ubiquitin-protein ligas (358 aa)
initn: 2401 init1: 2401 opt: 2401 Z-score: 1843.5 bits: 349.6 E(85289): 6.1e-96
Smith-Waterman score: 2401; 100.0% identity (100.0% similar) in 358 aa overlap (1-358:1-358)
10 20 30 40 50 60
pF1KB8 MAGCGEIDHSINMLPTNRKANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAGCGEIDHSINMLPTNRKANESCSNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KGASWLGKRCALCRQEIPEDFLDKPTLLSPEELKAASRGNGEYAWYYEGRNGWWQYDERT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGASWLGKRCALCRQEIPEDFLDKPTLLSPEELKAASRGNGEYAWYYEGRNGWWQYDERT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 SRELEDAFSKGKKNTEMLIAGFLYVADLENMVQYRRNEHGRRRKIKRDIIDIPKKGVAGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SRELEDAFSKGKKNTEMLIAGFLYVADLENMVQYRRNEHGRRRKIKRDIIDIPKKGVAGL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 RLDCDANTVNLARESSADGADSVSAQSGASVQPLVSSVRPLTSVDGQLTSPATPSPDAST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RLDCDANTVNLARESSADGADSVSAQSGASVQPLVSSVRPLTSVDGQLTSPATPSPDAST
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 SLEDSFAHLQLSGDNTAERSHRGEGEEDHESPSSGRVPAPDTSIEETESDASSDSEDVSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLEDSFAHLQLSGDNTAERSHRGEGEEDHESPSSGRVPAPDTSIEETESDASSDSEDVSA
250 260 270 280 290 300
310 320 330 340 350
pF1KB8 VVAQHSLTQQRLLVSNANQTVPDRSDRSGTDRSVAGGGTVSVSVRSRRPDGQCTVTEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVAQHSLTQQRLLVSNANQTVPDRSDRSGTDRSVAGGGTVSVSVRSRRPDGQCTVTEV
310 320 330 340 350
358 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 13:35:56 2016 done: Fri Nov 4 13:35:57 2016
Total Scan time: 7.850 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]