Result of FASTA (omim) for pF1KB8597
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8597, 254 aa
  1>>>pF1KB8597 254 - 254 aa - 254 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.0924+/-0.00033; mu= 5.9697+/- 0.021
 mean_var=105.4764+/-21.242, 0's: 0 Z-trim(118.4): 50  B-trim: 948 in 1/55
 Lambda= 0.124881
 statistics sampled from 31320 (31370) to 31320 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.751), E-opt: 0.2 (0.368), width:  16
 Scan time:  7.720

The best scores are:                                      opt bits E(85289)
NP_001257367 (OMIM: 606133) cdc42 effector protein ( 254) 1697 315.8 4.6e-86
NP_006440 (OMIM: 606133) cdc42 effector protein 3  ( 254) 1697 315.8 4.6e-86
NP_001257366 (OMIM: 606133) cdc42 effector protein ( 254) 1697 315.8 4.6e-86
XP_011530784 (OMIM: 606133) PREDICTED: cdc42 effec ( 254) 1697 315.8 4.6e-86
NP_001257365 (OMIM: 606133) cdc42 effector protein ( 254) 1697 315.8 4.6e-86
NP_006770 (OMIM: 606132) cdc42 effector protein 2  ( 210)  444 90.1 3.5e-18
XP_016872583 (OMIM: 606132) PREDICTED: cdc42 effec ( 210)  444 90.1 3.5e-18
NP_689449 (OMIM: 606084) cdc42 effector protein 1  ( 391)  200 46.2  0.0001
XP_006724172 (OMIM: 606084) PREDICTED: cdc42 effec ( 391)  200 46.2  0.0001
XP_006724170 (OMIM: 606084) PREDICTED: cdc42 effec ( 391)  200 46.2  0.0001
XP_006724171 (OMIM: 606084) PREDICTED: cdc42 effec ( 391)  200 46.2  0.0001
XP_016884030 (OMIM: 606084) PREDICTED: cdc42 effec ( 391)  200 46.2  0.0001
NP_036253 (OMIM: 605468) cdc42 effector protein 4  ( 356)  189 44.2 0.00038
XP_005257239 (OMIM: 605468) PREDICTED: cdc42 effec ( 356)  189 44.2 0.00038


>>NP_001257367 (OMIM: 606133) cdc42 effector protein 3 [  (254 aa)
 initn: 1697 init1: 1697 opt: 1697  Z-score: 1666.1  bits: 315.8 E(85289): 4.6e-86
Smith-Waterman score: 1697; 100.0% identity (100.0% similar) in 254 aa overlap (1-254:1-254)

               10        20        30        40        50        60
pF1KB8 MPAKTPIYLKAANNKKGKKFKLRDILSPDMISPPLGDFRHTIHIGKEGQHDVFGDISFLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPAKTPIYLKAANNKKGKKFKLRDILSPDMISPPLGDFRHTIHIGKEGQHDVFGDISFLQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 GNYELLPGNQEKAHLGQFPGHNEFFRANSTSDSVFTETPSPVLKNAISLPTIGGSQALML
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GNYELLPGNQEKAHLGQFPGHNEFFRANSTSDSVFTETPSPVLKNAISLPTIGGSQALML
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 PLLSPVTFNSKQESFGPAKLPRLSCEPVMEEKAQEKSSLLENGTVHQGDTSWGSSGSASQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLLSPVTFNSKQESFGPAKLPRLSCEPVMEEKAQEKSSLLENGTVHQGDTSWGSSGSASQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 SSQGRDSHSSSLSEQYPDWPAEDMFDHPTPCELIKGKTKSEESLSDLTGSLLSLQLDLGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSQGRDSHSSSLSEQYPDWPAEDMFDHPTPCELIKGKTKSEESLSDLTGSLLSLQLDLGP
              190       200       210       220       230       240

              250    
pF1KB8 SLLDEVLNVMDKNK
       ::::::::::::::
NP_001 SLLDEVLNVMDKNK
              250    

>>NP_006440 (OMIM: 606133) cdc42 effector protein 3 [Hom  (254 aa)
 initn: 1697 init1: 1697 opt: 1697  Z-score: 1666.1  bits: 315.8 E(85289): 4.6e-86
Smith-Waterman score: 1697; 100.0% identity (100.0% similar) in 254 aa overlap (1-254:1-254)

               10        20        30        40        50        60
pF1KB8 MPAKTPIYLKAANNKKGKKFKLRDILSPDMISPPLGDFRHTIHIGKEGQHDVFGDISFLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MPAKTPIYLKAANNKKGKKFKLRDILSPDMISPPLGDFRHTIHIGKEGQHDVFGDISFLQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 GNYELLPGNQEKAHLGQFPGHNEFFRANSTSDSVFTETPSPVLKNAISLPTIGGSQALML
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 GNYELLPGNQEKAHLGQFPGHNEFFRANSTSDSVFTETPSPVLKNAISLPTIGGSQALML
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 PLLSPVTFNSKQESFGPAKLPRLSCEPVMEEKAQEKSSLLENGTVHQGDTSWGSSGSASQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 PLLSPVTFNSKQESFGPAKLPRLSCEPVMEEKAQEKSSLLENGTVHQGDTSWGSSGSASQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 SSQGRDSHSSSLSEQYPDWPAEDMFDHPTPCELIKGKTKSEESLSDLTGSLLSLQLDLGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 SSQGRDSHSSSLSEQYPDWPAEDMFDHPTPCELIKGKTKSEESLSDLTGSLLSLQLDLGP
              190       200       210       220       230       240

              250    
pF1KB8 SLLDEVLNVMDKNK
       ::::::::::::::
NP_006 SLLDEVLNVMDKNK
              250    

>>NP_001257366 (OMIM: 606133) cdc42 effector protein 3 [  (254 aa)
 initn: 1697 init1: 1697 opt: 1697  Z-score: 1666.1  bits: 315.8 E(85289): 4.6e-86
Smith-Waterman score: 1697; 100.0% identity (100.0% similar) in 254 aa overlap (1-254:1-254)

               10        20        30        40        50        60
pF1KB8 MPAKTPIYLKAANNKKGKKFKLRDILSPDMISPPLGDFRHTIHIGKEGQHDVFGDISFLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPAKTPIYLKAANNKKGKKFKLRDILSPDMISPPLGDFRHTIHIGKEGQHDVFGDISFLQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 GNYELLPGNQEKAHLGQFPGHNEFFRANSTSDSVFTETPSPVLKNAISLPTIGGSQALML
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GNYELLPGNQEKAHLGQFPGHNEFFRANSTSDSVFTETPSPVLKNAISLPTIGGSQALML
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 PLLSPVTFNSKQESFGPAKLPRLSCEPVMEEKAQEKSSLLENGTVHQGDTSWGSSGSASQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLLSPVTFNSKQESFGPAKLPRLSCEPVMEEKAQEKSSLLENGTVHQGDTSWGSSGSASQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 SSQGRDSHSSSLSEQYPDWPAEDMFDHPTPCELIKGKTKSEESLSDLTGSLLSLQLDLGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSQGRDSHSSSLSEQYPDWPAEDMFDHPTPCELIKGKTKSEESLSDLTGSLLSLQLDLGP
              190       200       210       220       230       240

              250    
pF1KB8 SLLDEVLNVMDKNK
       ::::::::::::::
NP_001 SLLDEVLNVMDKNK
              250    

>>XP_011530784 (OMIM: 606133) PREDICTED: cdc42 effector   (254 aa)
 initn: 1697 init1: 1697 opt: 1697  Z-score: 1666.1  bits: 315.8 E(85289): 4.6e-86
Smith-Waterman score: 1697; 100.0% identity (100.0% similar) in 254 aa overlap (1-254:1-254)

               10        20        30        40        50        60
pF1KB8 MPAKTPIYLKAANNKKGKKFKLRDILSPDMISPPLGDFRHTIHIGKEGQHDVFGDISFLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPAKTPIYLKAANNKKGKKFKLRDILSPDMISPPLGDFRHTIHIGKEGQHDVFGDISFLQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 GNYELLPGNQEKAHLGQFPGHNEFFRANSTSDSVFTETPSPVLKNAISLPTIGGSQALML
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GNYELLPGNQEKAHLGQFPGHNEFFRANSTSDSVFTETPSPVLKNAISLPTIGGSQALML
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 PLLSPVTFNSKQESFGPAKLPRLSCEPVMEEKAQEKSSLLENGTVHQGDTSWGSSGSASQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PLLSPVTFNSKQESFGPAKLPRLSCEPVMEEKAQEKSSLLENGTVHQGDTSWGSSGSASQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 SSQGRDSHSSSLSEQYPDWPAEDMFDHPTPCELIKGKTKSEESLSDLTGSLLSLQLDLGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SSQGRDSHSSSLSEQYPDWPAEDMFDHPTPCELIKGKTKSEESLSDLTGSLLSLQLDLGP
              190       200       210       220       230       240

              250    
pF1KB8 SLLDEVLNVMDKNK
       ::::::::::::::
XP_011 SLLDEVLNVMDKNK
              250    

>>NP_001257365 (OMIM: 606133) cdc42 effector protein 3 [  (254 aa)
 initn: 1697 init1: 1697 opt: 1697  Z-score: 1666.1  bits: 315.8 E(85289): 4.6e-86
Smith-Waterman score: 1697; 100.0% identity (100.0% similar) in 254 aa overlap (1-254:1-254)

               10        20        30        40        50        60
pF1KB8 MPAKTPIYLKAANNKKGKKFKLRDILSPDMISPPLGDFRHTIHIGKEGQHDVFGDISFLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPAKTPIYLKAANNKKGKKFKLRDILSPDMISPPLGDFRHTIHIGKEGQHDVFGDISFLQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 GNYELLPGNQEKAHLGQFPGHNEFFRANSTSDSVFTETPSPVLKNAISLPTIGGSQALML
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GNYELLPGNQEKAHLGQFPGHNEFFRANSTSDSVFTETPSPVLKNAISLPTIGGSQALML
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 PLLSPVTFNSKQESFGPAKLPRLSCEPVMEEKAQEKSSLLENGTVHQGDTSWGSSGSASQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLLSPVTFNSKQESFGPAKLPRLSCEPVMEEKAQEKSSLLENGTVHQGDTSWGSSGSASQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 SSQGRDSHSSSLSEQYPDWPAEDMFDHPTPCELIKGKTKSEESLSDLTGSLLSLQLDLGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSQGRDSHSSSLSEQYPDWPAEDMFDHPTPCELIKGKTKSEESLSDLTGSLLSLQLDLGP
              190       200       210       220       230       240

              250    
pF1KB8 SLLDEVLNVMDKNK
       ::::::::::::::
NP_001 SLLDEVLNVMDKNK
              250    

>>NP_006770 (OMIM: 606132) cdc42 effector protein 2 [Hom  (210 aa)
 initn: 540 init1: 293 opt: 444  Z-score: 447.4  bits: 90.1 E(85289): 3.5e-18
Smith-Waterman score: 493; 43.1% identity (61.6% similar) in 255 aa overlap (1-253:1-202)

               10        20        30        40        50        60
pF1KB8 MPAKTPIYLKAANNKKGKKFKLRDILSPDMISPPLGDFRHTIHIGKEGQHDVFGDISFLQ
       : .:.::::: .. .:::: ::::.:: :::::::::::::::::. :  :.::::::::
NP_006 MSTKVPIYLKRGS-RKGKKEKLRDLLSSDMISPPLGDFRHTIHIGSGGGSDMFGDISFLQ
               10         20        30        40        50         

               70          80        90       100       110        
pF1KB8 GNYELLPGNQEKA--HLGQFPGHNEFFRANSTSDSVFTETPSPVLKNAISLPTIGGSQAL
       :...::::.. ..  . : :    .: :. ..    . . :::.::::::::.::: :::
NP_006 GKFHLLPGTMVEGPEEDGTFDLPFQFTRTATVCGRELPDGPSPLLKNAISLPVIGGPQAL
      60        70        80        90       100       110         

      120       130       140       150       160       170        
pF1KB8 MLPLLSPVTFNSKQESFGPAKLPRLSCEPVMEEKAQEKSSLLENGTVHQGDTSWGSSGSA
        ::        . :   .: : :::  :         . :  :.:.:   :  :    ..
NP_006 TLP--------TAQ---APPKPPRLHLET-------PQPSPQEGGSV---DI-WRIPETG
     120                  130              140          150        

      180       190       200       210       220       230        
pF1KB8 SQSSQGRDSHSSSLSEQYPDWPAEDMFDHPTPCELIKGKTKSEESLSDLTGSLLSLQLDL
       : .:        .:.   :.  ::. :                  ::. ..:::::..::
NP_006 SPNS--------GLT---PESGAEEPF------------------LSN-ASSLLSLHVDL
       160                  170                          180       

      240       250           
pF1KB8 GPSLLDEVLNVMDKNK       
       :::.::.::..::..        
NP_006 GPSILDDVLQIMDQDLDSMQIPT
       190       200       210

>>XP_016872583 (OMIM: 606132) PREDICTED: cdc42 effector   (210 aa)
 initn: 540 init1: 293 opt: 444  Z-score: 447.4  bits: 90.1 E(85289): 3.5e-18
Smith-Waterman score: 493; 43.1% identity (61.6% similar) in 255 aa overlap (1-253:1-202)

               10        20        30        40        50        60
pF1KB8 MPAKTPIYLKAANNKKGKKFKLRDILSPDMISPPLGDFRHTIHIGKEGQHDVFGDISFLQ
       : .:.::::: .. .:::: ::::.:: :::::::::::::::::. :  :.::::::::
XP_016 MSTKVPIYLKRGS-RKGKKEKLRDLLSSDMISPPLGDFRHTIHIGSGGGSDMFGDISFLQ
               10         20        30        40        50         

               70          80        90       100       110        
pF1KB8 GNYELLPGNQEKA--HLGQFPGHNEFFRANSTSDSVFTETPSPVLKNAISLPTIGGSQAL
       :...::::.. ..  . : :    .: :. ..    . . :::.::::::::.::: :::
XP_016 GKFHLLPGTMVEGPEEDGTFDLPFQFTRTATVCGRELPDGPSPLLKNAISLPVIGGPQAL
      60        70        80        90       100       110         

      120       130       140       150       160       170        
pF1KB8 MLPLLSPVTFNSKQESFGPAKLPRLSCEPVMEEKAQEKSSLLENGTVHQGDTSWGSSGSA
        ::        . :   .: : :::  :         . :  :.:.:   :  :    ..
XP_016 TLP--------TAQ---APPKPPRLHLET-------PQPSPQEGGSV---DI-WRIPETG
     120                  130              140          150        

      180       190       200       210       220       230        
pF1KB8 SQSSQGRDSHSSSLSEQYPDWPAEDMFDHPTPCELIKGKTKSEESLSDLTGSLLSLQLDL
       : .:        .:.   :.  ::. :                  ::. ..:::::..::
XP_016 SPNS--------GLT---PESGAEEPF------------------LSN-ASSLLSLHVDL
       160                  170                          180       

      240       250           
pF1KB8 GPSLLDEVLNVMDKNK       
       :::.::.::..::..        
XP_016 GPSILDDVLQIMDQDLDSMQIPT
       190       200       210

>>NP_689449 (OMIM: 606084) cdc42 effector protein 1 [Hom  (391 aa)
 initn: 274 init1: 116 opt: 200  Z-score: 205.5  bits: 46.2 E(85289): 0.0001
Smith-Waterman score: 214; 31.0% identity (52.2% similar) in 226 aa overlap (26-250:33-214)

                    10        20        30        40        50     
pF1KB8      MPAKTPIYLKAANNKKGKKFKLRDILSPDMISPPLGDFRHTIHIGKEGQHDVFGD
                                     :. :::: ::::::::.:.:. :  :::::
NP_689 GPQGGRGAATMSLGKLSPVGWVSSSQGKRRLTADMISHPLGDFRHTMHVGRGG--DVFGD
             10        20        30        40        50          60

          60        70        80        90       100       110     
pF1KB8 ISFLQGNYELLPGNQEKAHLGQFPGHNEFFRANSTSDSVFTETPSPVLKNAISLPTIGGS
        :::. :.    :. ...  . .  . .. :  ..    ..  :.:        :.    
NP_689 TSFLS-NHGGSSGSTHRSPRSFLAKKLQLVRRVGAPPRRMASPPAPS-------PAP---
                70        80        90       100                   

         120       130       140       150       160       170     
pF1KB8 QALMLPLLSPVTFNSKQESFGPAKLPRLSCEPVMEEKAQEKSSLLENGTVHQGDTSWGSS
            : .::.  :.        .::.:.         :   . :  : . . :.:  .:
NP_689 -----PAISPIIKNA-------ISLPQLN---------QAAYDSLVVGKL-SFDSS-PTS
          110              120                130        140       

         180       190        200       210       220       230    
pF1KB8 GSASQSSQGRDSHSSSLSE-QYPDWPAEDMFDHPTPCELIKGKTKSEESLSDLTGSLLSL
       .. ..:: : ::   ..:.    . : .   :   : :   :  .:.  ::      . :
NP_689 STDGHSSYGLDSGFCTISRLPRSEKPHDRDRDGSFPSE--PGLRRSDSLLS------FRL
        150       160       170       180         190              

          240       250                                            
pF1KB8 QLDLGPSLLDEVLNVMDKNK                                        
       .::::::::.:.:.::                                            
NP_689 DLDLGPSLLSELLGVMSLPEAPAAETPAPAANPPAPTANPTGPAANPPATTANPPAPAAN
      200       210       220       230       240       250        

>>XP_006724172 (OMIM: 606084) PREDICTED: cdc42 effector   (391 aa)
 initn: 274 init1: 116 opt: 200  Z-score: 205.5  bits: 46.2 E(85289): 0.0001
Smith-Waterman score: 214; 31.0% identity (52.2% similar) in 226 aa overlap (26-250:33-214)

                    10        20        30        40        50     
pF1KB8      MPAKTPIYLKAANNKKGKKFKLRDILSPDMISPPLGDFRHTIHIGKEGQHDVFGD
                                     :. :::: ::::::::.:.:. :  :::::
XP_006 GPQGGRGAATMSLGKLSPVGWVSSSQGKRRLTADMISHPLGDFRHTMHVGRGG--DVFGD
             10        20        30        40        50          60

          60        70        80        90       100       110     
pF1KB8 ISFLQGNYELLPGNQEKAHLGQFPGHNEFFRANSTSDSVFTETPSPVLKNAISLPTIGGS
        :::. :.    :. ...  . .  . .. :  ..    ..  :.:        :.    
XP_006 TSFLS-NHGGSSGSTHRSPRSFLAKKLQLVRRVGAPPRRMASPPAPS-------PAP---
                70        80        90       100                   

         120       130       140       150       160       170     
pF1KB8 QALMLPLLSPVTFNSKQESFGPAKLPRLSCEPVMEEKAQEKSSLLENGTVHQGDTSWGSS
            : .::.  :.        .::.:.         :   . :  : . . :.:  .:
XP_006 -----PAISPIIKNA-------ISLPQLN---------QAAYDSLVVGKL-SFDSS-PTS
          110              120                130        140       

         180       190        200       210       220       230    
pF1KB8 GSASQSSQGRDSHSSSLSE-QYPDWPAEDMFDHPTPCELIKGKTKSEESLSDLTGSLLSL
       .. ..:: : ::   ..:.    . : .   :   : :   :  .:.  ::      . :
XP_006 STDGHSSYGLDSGFCTISRLPRSEKPHDRDRDGSFPSE--PGLRRSDSLLS------FRL
        150       160       170       180         190              

          240       250                                            
pF1KB8 QLDLGPSLLDEVLNVMDKNK                                        
       .::::::::.:.:.::                                            
XP_006 DLDLGPSLLSELLGVMSLPEAPAAETPAPAANPPAPTANPTGPAANPPATTANPPAPAAN
      200       210       220       230       240       250        

>>XP_006724170 (OMIM: 606084) PREDICTED: cdc42 effector   (391 aa)
 initn: 274 init1: 116 opt: 200  Z-score: 205.5  bits: 46.2 E(85289): 0.0001
Smith-Waterman score: 214; 31.0% identity (52.2% similar) in 226 aa overlap (26-250:33-214)

                    10        20        30        40        50     
pF1KB8      MPAKTPIYLKAANNKKGKKFKLRDILSPDMISPPLGDFRHTIHIGKEGQHDVFGD
                                     :. :::: ::::::::.:.:. :  :::::
XP_006 GPQGGRGAATMSLGKLSPVGWVSSSQGKRRLTADMISHPLGDFRHTMHVGRGG--DVFGD
             10        20        30        40        50          60

          60        70        80        90       100       110     
pF1KB8 ISFLQGNYELLPGNQEKAHLGQFPGHNEFFRANSTSDSVFTETPSPVLKNAISLPTIGGS
        :::. :.    :. ...  . .  . .. :  ..    ..  :.:        :.    
XP_006 TSFLS-NHGGSSGSTHRSPRSFLAKKLQLVRRVGAPPRRMASPPAPS-------PAP---
                70        80        90       100                   

         120       130       140       150       160       170     
pF1KB8 QALMLPLLSPVTFNSKQESFGPAKLPRLSCEPVMEEKAQEKSSLLENGTVHQGDTSWGSS
            : .::.  :.        .::.:.         :   . :  : . . :.:  .:
XP_006 -----PAISPIIKNA-------ISLPQLN---------QAAYDSLVVGKL-SFDSS-PTS
          110              120                130        140       

         180       190        200       210       220       230    
pF1KB8 GSASQSSQGRDSHSSSLSE-QYPDWPAEDMFDHPTPCELIKGKTKSEESLSDLTGSLLSL
       .. ..:: : ::   ..:.    . : .   :   : :   :  .:.  ::      . :
XP_006 STDGHSSYGLDSGFCTISRLPRSEKPHDRDRDGSFPSE--PGLRRSDSLLS------FRL
        150       160       170       180         190              

          240       250                                            
pF1KB8 QLDLGPSLLDEVLNVMDKNK                                        
       .::::::::.:.:.::                                            
XP_006 DLDLGPSLLSELLGVMSLPEAPAAETPAPAANPPAPTANPTGPAANPPATTANPPAPAAN
      200       210       220       230       240       250        




254 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 01:34:37 2016 done: Sat Nov  5 01:34:38 2016
 Total Scan time:  7.720 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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