Result of FASTA (ccds) for
pF1KB8615
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8615, 488 aa
1>>>pF1KB8615 488 - 488 aa - 488 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.7450+/-0.000981; mu= 9.2186+/- 0.060
mean_var=164.4937+/-31.914, 0's: 0 Z-trim(110.6): 12 B-trim: 12 in 1/53
Lambda= 0.100000
statistics sampled from 11730 (11736) to 11730 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.708), E-opt: 0.2 (0.361), width: 16
Scan time: 2.920
The best scores are: opt bits E(32554)
CCDS46484.1 SPATS2L gene_id:26010|Hs108|chr2 ( 489) 3186 471.6 8.6e-133
CCDS74622.1 SPATS2L gene_id:26010|Hs108|chr2 ( 498) 2237 334.7 1.4e-91
CCDS46483.1 SPATS2L gene_id:26010|Hs108|chr2 ( 558) 2237 334.7 1.6e-91
CCDS74621.1 SPATS2L gene_id:26010|Hs108|chr2 ( 588) 2237 334.7 1.6e-91
CCDS31794.1 SPATS2 gene_id:65244|Hs108|chr12 ( 545) 777 124.1 3.9e-28
>>CCDS46484.1 SPATS2L gene_id:26010|Hs108|chr2 (489 aa)
initn: 2799 init1: 2799 opt: 3186 Z-score: 2497.5 bits: 471.6 E(32554): 8.6e-133
Smith-Waterman score: 3186; 99.8% identity (99.8% similar) in 489 aa overlap (1-488:1-489)
10 20 30 40 50 60
pF1KB8 MAELNTHVNVKEKIYAVRSVVPNKSNNEIVLVLQQFDFNVDKAVQAFVDGSAIQVLKEWN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MAELNTHVNVKEKIYAVRSVVPNKSNNEIVLVLQQFDFNVDKAVQAFVDGSAIQVLKEWN
10 20 30 40 50 60
70 80 90 100 110
pF1KB8 MTGKK-NNKRKRSKSKQHQGNKDAKDKVERPEAGPLQPQPPQIQNGPMNGCEKDSSSTDS
::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MTGKKKNNKRKRSKSKQHQGNKDAKDKVERPEAGPLQPQPPQIQNGPMNGCEKDSSSTDS
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 ANEKPALIPREKKISILEEPSKALRGVTGPNIEKSVKDLQRCTVSLTRYRVMIKEEVDSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 ANEKPALIPREKKISILEEPSKALRGVTGPNIEKSVKDLQRCTVSLTRYRVMIKEEVDSS
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB8 VKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMEILTARQKKAEELKRLTDLASQMAEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 VKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMEILTARQKKAEELKRLTDLASQMAEM
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB8 QLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQIMLCGEITHPKNNYSSRTPCSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 QLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQIMLCGEITHPKNNYSSRTPCSS
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB8 LLPLLNAHAATSGKQSNFSRKSSTHNKPSEGKAANPKMVSSLPSTADPSHQTMPANKQNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LLPLLNAHAATSGKQSNFSRKSSTHNKPSEGKAANPKMVSSLPSTADPSHQTMPANKQNG
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB8 SSNQRRRFNPQYHNNRLNGPAKSQGSGNEAEPLGKGNSRHEHRRQPHNGFRPKNKGGAKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SSNQRRRFNPQYHNNRLNGPAKSQGSGNEAEPLGKGNSRHEHRRQPHNGFRPKNKGGAKN
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB8 QEASLGMKTPEAPAHSEKPRRRQHAADTSEARPFRGSVGRVSQCNLCPTRIEVSTDAAVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 QEASLGMKTPEAPAHSEKPRRRQHAADTSEARPFRGSVGRVSQCNLCPTRIEVSTDAAVL
430 440 450 460 470 480
480
pF1KB8 SVPAVTLVA
:::::::::
CCDS46 SVPAVTLVA
>>CCDS74622.1 SPATS2L gene_id:26010|Hs108|chr2 (498 aa)
initn: 2274 init1: 2237 opt: 2237 Z-score: 1757.4 bits: 334.7 E(32554): 1.4e-91
Smith-Waterman score: 2659; 85.9% identity (85.9% similar) in 498 aa overlap (61-488:1-498)
40 50 60 70 80
pF1KB8 LVLQQFDFNVDKAVQAFVDGSAIQVLKEWNMTGKK-NNKRKRSKSKQHQGNKDAKDKVER
::::: ::::::::::::::::::::::::
CCDS74 MTGKKKNNKRKRSKSKQHQGNKDAKDKVER
10 20 30
90 100 110 120 130 140
pF1KB8 PEAGPLQPQPPQIQNGPMNGCEKDSSSTDSANEKPALIPREKKISILEEPSKALRGVT--
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 PEAGPLQPQPPQIQNGPMNGCEKDSSSTDSANEKPALIPREKKISILEEPSKALRGVTEG
40 50 60 70 80 90
pF1KB8 ------------------------------------------------------------
CCDS74 NRLLQQKLSLDGNPKPIHGTTERSDGLQWSAEQPCNPSKPKAKTSPVKSNTPAAHLEIKP
100 110 120 130 140 150
150 160 170 180 190 200
pF1KB8 -------GPNIEKSVKDLQRCTVSLTRYRVMIKEEVDSSVKKIKAAFAELHNCIIDKEVS
:::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 DELAKKRGPNIEKSVKDLQRCTVSLTRYRVMIKEEVDSSVKKIKAAFAELHNCIIDKEVS
160 170 180 190 200 210
210 220 230 240 250 260
pF1KB8 LMAEMDKVKEEAMEILTARQKKAEELKRLTDLASQMAEMQLAELRAEIKHFVSERKYDEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 LMAEMDKVKEEAMEILTARQKKAEELKRLTDLASQMAEMQLAELRAEIKHFVSERKYDEE
220 230 240 250 260 270
270 280 290 300 310 320
pF1KB8 LGKAARFSCDIEQLKAQIMLCGEITHPKNNYSSRTPCSSLLPLLNAHAATSGKQSNFSRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 LGKAARFSCDIEQLKAQIMLCGEITHPKNNYSSRTPCSSLLPLLNAHAATSGKQSNFSRK
280 290 300 310 320 330
330 340 350 360 370 380
pF1KB8 SSTHNKPSEGKAANPKMVSSLPSTADPSHQTMPANKQNGSSNQRRRFNPQYHNNRLNGPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 SSTHNKPSEGKAANPKMVSSLPSTADPSHQTMPANKQNGSSNQRRRFNPQYHNNRLNGPA
340 350 360 370 380 390
390 400 410 420 430 440
pF1KB8 KSQGSGNEAEPLGKGNSRHEHRRQPHNGFRPKNKGGAKNQEASLGMKTPEAPAHSEKPRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 KSQGSGNEAEPLGKGNSRHEHRRQPHNGFRPKNKGGAKNQEASLGMKTPEAPAHSEKPRR
400 410 420 430 440 450
450 460 470 480
pF1KB8 RQHAADTSEARPFRGSVGRVSQCNLCPTRIEVSTDAAVLSVPAVTLVA
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 RQHAADTSEARPFRGSVGRVSQCNLCPTRIEVSTDAAVLSVPAVTLVA
460 470 480 490
>>CCDS46483.1 SPATS2L gene_id:26010|Hs108|chr2 (558 aa)
initn: 2653 init1: 2237 opt: 2237 Z-score: 1756.8 bits: 334.7 E(32554): 1.6e-91
Smith-Waterman score: 2802; 86.5% identity (86.5% similar) in 520 aa overlap (39-488:39-558)
10 20 30 40 50 60
pF1KB8 NVKEKIYAVRSVVPNKSNNEIVLVLQQFDFNVDKAVQAFVDGSAIQVLKEWNMTGKK-NN
::::::::::::::::::::::::::: ::
CCDS46 NVKEKIYAVRSVVPNKSNNEIVLVLQQFDFNVDKAVQAFVDGSAIQVLKEWNMTGKKKNN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KRKRSKSKQHQGNKDAKDKVERPEAGPLQPQPPQIQNGPMNGCEKDSSSTDSANEKPALI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 KRKRSKSKQHQGNKDAKDKVERPEAGPLQPQPPQIQNGPMNGCEKDSSSTDSANEKPALI
70 80 90 100 110 120
130 140
pF1KB8 PREKKISILEEPSKALRGVT----------------------------------------
::::::::::::::::::::
CCDS46 PREKKISILEEPSKALRGVTEGNRLLQQKLSLDGNPKPIHGTTERSDGLQWSAEQPCNPS
130 140 150 160 170 180
150 160 170
pF1KB8 -----------------------------GPNIEKSVKDLQRCTVSLTRYRVMIKEEVDS
:::::::::::::::::::::::::::::::
CCDS46 KPKAKTSPVKSNTPAAHLEIKPDELAKKRGPNIEKSVKDLQRCTVSLTRYRVMIKEEVDS
190 200 210 220 230 240
180 190 200 210 220 230
pF1KB8 SVKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMEILTARQKKAEELKRLTDLASQMAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SVKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMEILTARQKKAEELKRLTDLASQMAE
250 260 270 280 290 300
240 250 260 270 280 290
pF1KB8 MQLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQIMLCGEITHPKNNYSSRTPCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MQLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQIMLCGEITHPKNNYSSRTPCS
310 320 330 340 350 360
300 310 320 330 340 350
pF1KB8 SLLPLLNAHAATSGKQSNFSRKSSTHNKPSEGKAANPKMVSSLPSTADPSHQTMPANKQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SLLPLLNAHAATSGKQSNFSRKSSTHNKPSEGKAANPKMVSSLPSTADPSHQTMPANKQN
370 380 390 400 410 420
360 370 380 390 400 410
pF1KB8 GSSNQRRRFNPQYHNNRLNGPAKSQGSGNEAEPLGKGNSRHEHRRQPHNGFRPKNKGGAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GSSNQRRRFNPQYHNNRLNGPAKSQGSGNEAEPLGKGNSRHEHRRQPHNGFRPKNKGGAK
430 440 450 460 470 480
420 430 440 450 460 470
pF1KB8 NQEASLGMKTPEAPAHSEKPRRRQHAADTSEARPFRGSVGRVSQCNLCPTRIEVSTDAAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 NQEASLGMKTPEAPAHSEKPRRRQHAADTSEARPFRGSVGRVSQCNLCPTRIEVSTDAAV
490 500 510 520 530 540
480
pF1KB8 LSVPAVTLVA
::::::::::
CCDS46 LSVPAVTLVA
550
>>CCDS74621.1 SPATS2L gene_id:26010|Hs108|chr2 (588 aa)
initn: 2653 init1: 2237 opt: 2237 Z-score: 1756.4 bits: 334.7 E(32554): 1.6e-91
Smith-Waterman score: 2802; 86.5% identity (86.5% similar) in 520 aa overlap (39-488:69-588)
10 20 30 40 50 60
pF1KB8 NVKEKIYAVRSVVPNKSNNEIVLVLQQFDFNVDKAVQAFVDGSAIQVLKEWNMTGKK-NN
::::::::::::::::::::::::::: ::
CCDS74 NVKEKIYAVRSVVPNKSNNEIVLVLQQFDFNVDKAVQAFVDGSAIQVLKEWNMTGKKKNN
40 50 60 70 80 90
70 80 90 100 110 120
pF1KB8 KRKRSKSKQHQGNKDAKDKVERPEAGPLQPQPPQIQNGPMNGCEKDSSSTDSANEKPALI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 KRKRSKSKQHQGNKDAKDKVERPEAGPLQPQPPQIQNGPMNGCEKDSSSTDSANEKPALI
100 110 120 130 140 150
130 140
pF1KB8 PREKKISILEEPSKALRGVT----------------------------------------
::::::::::::::::::::
CCDS74 PREKKISILEEPSKALRGVTEGNRLLQQKLSLDGNPKPIHGTTERSDGLQWSAEQPCNPS
160 170 180 190 200 210
150 160 170
pF1KB8 -----------------------------GPNIEKSVKDLQRCTVSLTRYRVMIKEEVDS
:::::::::::::::::::::::::::::::
CCDS74 KPKAKTSPVKSNTPAAHLEIKPDELAKKRGPNIEKSVKDLQRCTVSLTRYRVMIKEEVDS
220 230 240 250 260 270
180 190 200 210 220 230
pF1KB8 SVKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMEILTARQKKAEELKRLTDLASQMAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 SVKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMEILTARQKKAEELKRLTDLASQMAE
280 290 300 310 320 330
240 250 260 270 280 290
pF1KB8 MQLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQIMLCGEITHPKNNYSSRTPCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 MQLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQIMLCGEITHPKNNYSSRTPCS
340 350 360 370 380 390
300 310 320 330 340 350
pF1KB8 SLLPLLNAHAATSGKQSNFSRKSSTHNKPSEGKAANPKMVSSLPSTADPSHQTMPANKQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 SLLPLLNAHAATSGKQSNFSRKSSTHNKPSEGKAANPKMVSSLPSTADPSHQTMPANKQN
400 410 420 430 440 450
360 370 380 390 400 410
pF1KB8 GSSNQRRRFNPQYHNNRLNGPAKSQGSGNEAEPLGKGNSRHEHRRQPHNGFRPKNKGGAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 GSSNQRRRFNPQYHNNRLNGPAKSQGSGNEAEPLGKGNSRHEHRRQPHNGFRPKNKGGAK
460 470 480 490 500 510
420 430 440 450 460 470
pF1KB8 NQEASLGMKTPEAPAHSEKPRRRQHAADTSEARPFRGSVGRVSQCNLCPTRIEVSTDAAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 NQEASLGMKTPEAPAHSEKPRRRQHAADTSEARPFRGSVGRVSQCNLCPTRIEVSTDAAV
520 530 540 550 560 570
480
pF1KB8 LSVPAVTLVA
::::::::::
CCDS74 LSVPAVTLVA
580
>>CCDS31794.1 SPATS2 gene_id:65244|Hs108|chr12 (545 aa)
initn: 1084 init1: 710 opt: 777 Z-score: 618.5 bits: 124.1 E(32554): 3.9e-28
Smith-Waterman score: 873; 37.8% identity (63.2% similar) in 497 aa overlap (34-447:56-540)
10 20 30 40 50 60
pF1KB8 LNTHVNVKEKIYAVRSVVPNKSNNEIVLVLQQFDFNVDKAVQAFVDGSAIQVLKEWNMTG
:.:: :::.::::..::: .:::::..::
CCDS31 GGAFENMKEKINAVRAIVPNKSNNEIILVLQHFDNCVDKTVQAFMEGSASEVLKEWTVTG
30 40 50 60 70 80
70 80 90 100 110
pF1KB8 KKNNKRKRSKSKQ----HQGNKDAKDKVERPEAGPLQPQPPQIQNGPMNGCE-----KDS
::.::.:..: : .: :.. .: : . . :. ..: ::: . .:.
CCDS31 KKKNKKKKNKPKPAAEPSNGIPDSSKSVSIQE----EQSAPSSEKGGMNGYHVNGAINDT
90 100 110 120 130 140
120 130
pF1KB8 SSTDSANE---------------KPALIPR-EKKISILE--------------------E
:.:: .: . :.. .. :.:. .
CCDS31 ESVDSLSEGLETLSIDARELEDPESAMLDTLDRTGSMLQNGVSDFETKSLTMHSIHNSQQ
150 160 170 180 190 200
140 150 160 170
pF1KB8 PSKALRGVTGP------------------------NIEKSVKDLQRCTVSLTRYRVMIKE
: .: .... : ::::::::::::::::.::::..::
CCDS31 PRNAAKSLSRPTTETQFSNMGMEDVPLATSKKLSSNIEKSVKDLQRCTVSLARYRVVVKE
210 220 230 240 250 260
180 190 200 210 220 230
pF1KB8 EVDSSVKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMEILTARQKKAEELKRLTDLAS
:.:.:.::.: :::::..:..:.::.:.::::::: :::::: .:::::: ::..: .:
CCDS31 EMDASIKKMKQAFAELESCLMDREVALLAEMDKVKAEAMEILLSRQKKAELLKKMTHVAV
270 280 290 300 310 320
240 250 260 270 280 290
pF1KB8 QMAEMQLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQIMLCGEITHPKNNYSSR
::.:.::.::::.::::::::::::.::..:::.::.: :: .: :...::::.::.:
CCDS31 QMSEQQLVELRADIKHFVSERKYDEDLGRVARFTCDVETLKKSIDSFGQVSHPKNSYSTR
330 340 350 360 370 380
300 310 320 330 340
pF1KB8 TPCSSLLPLL-----NAHAATSGKQSNFSRKSSTHNK---PSEGKAANPKMVSSLPSTAD
. :::. . .: ::.:. .. .:...: :.: :: ...: . .
CCDS31 SRCSSVTSVSLSSPSDASAASSSTCASPPSLTSANKKNFAPGETPAA---IANSSGQPYQ
390 400 410 420 430
350 360 370 380 390 400
pF1KB8 PSHQTMPANKQNGSSNQRRRFNPQYHNNRLN-GPAKSQGSGNEAEPLGKGNSRHEH--RR
: ....:.:...: : : . : :. .: : :.: .. ..: ::.. .
CCDS31 PLREVLPGNRRGG---QGYRPQGQKSNDPMNQGRHDSMGRYRNSSWYSSG-SRYQSAPSQ
440 450 460 470 480 490
410 420 430 440 450 460
pF1KB8 QPHNGFRPKNKGGAKNQEASLGMKTPEAPAHSEK---PRRRQHAADTSEARPFRGSVGRV
: : .. . .: .. ....:. : :. : : :.:. ....:
CCDS31 APGNTIERGQTHSAGTNGTGVSME-PSPPTPSFKKGLPQRKPRTSQTEAVNS
500 510 520 530 540
470 480
pF1KB8 SQCNLCPTRIEVSTDAAVLSVPAVTLVA
488 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 13:40:43 2016 done: Fri Nov 4 13:40:44 2016
Total Scan time: 2.920 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]