Result of FASTA (ccds) for pF1KB8648
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8648, 340 aa
  1>>>pF1KB8648 340 - 340 aa - 340 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.1441+/-0.000842; mu= 16.6574+/- 0.051
 mean_var=57.5558+/-11.287, 0's: 0 Z-trim(104.8): 27  B-trim: 6 in 1/50
 Lambda= 0.169056
 statistics sampled from 8064 (8086) to 8064 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.621), E-opt: 0.2 (0.248), width:  16
 Scan time:  1.940

The best scores are:                                      opt bits E(32554)
CCDS13973.1 DMC1 gene_id:11144|Hs108|chr22         ( 340) 2192 542.9 1.4e-154
CCDS10062.1 RAD51 gene_id:5888|Hs108|chr15         ( 339) 1108 278.5 5.4e-75
CCDS53931.1 RAD51 gene_id:5888|Hs108|chr15         ( 340)  948 239.5   3e-63
CCDS63477.1 DMC1 gene_id:11144|Hs108|chr22         ( 285)  919 232.4 3.5e-61
CCDS53932.1 RAD51 gene_id:5888|Hs108|chr15         ( 280)  756 192.6 3.2e-49
CCDS9790.1 RAD51B gene_id:5890|Hs108|chr14         ( 350)  314 84.9 1.1e-16
CCDS9789.1 RAD51B gene_id:5890|Hs108|chr14         ( 384)  314 84.9 1.2e-16
CCDS81815.1 RAD51B gene_id:5890|Hs108|chr14        ( 425)  314 84.9 1.3e-16


>>CCDS13973.1 DMC1 gene_id:11144|Hs108|chr22              (340 aa)
 initn: 2192 init1: 2192 opt: 2192  Z-score: 2888.7  bits: 542.9 E(32554): 1.4e-154
Smith-Waterman score: 2192; 100.0% identity (100.0% similar) in 340 aa overlap (1-340:1-340)

               10        20        30        40        50        60
pF1KB8 MKEDQVVAEEPGFQDEEESLFQDIDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MKEDQVVAEEPGFQDEEESLFQDIDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 NVKGLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 NVKGLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 ITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 ITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNVD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 HDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 HDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 ERQQKLAQMLSRLQKISEEYNVAVFVTNQMTADPGATMTFQADPKKPIGGHILAHASTTR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 ERQQKLAQMLSRLQKISEEYNVAVFVTNQMTADPGATMTFQADPKKPIGGHILAHASTTR
              250       260       270       280       290       300

              310       320       330       340
pF1KB8 ISLRKGRGELRIAKIYDSPEMPENEATFAITAGGIGDAKE
       ::::::::::::::::::::::::::::::::::::::::
CCDS13 ISLRKGRGELRIAKIYDSPEMPENEATFAITAGGIGDAKE
              310       320       330       340

>>CCDS10062.1 RAD51 gene_id:5888|Hs108|chr15              (339 aa)
 initn: 1161 init1: 615 opt: 1108  Z-score: 1459.9  bits: 278.5 E(32554): 5.4e-75
Smith-Waterman score: 1108; 55.0% identity (79.5% similar) in 327 aa overlap (16-340:16-339)

               10        20         30        40        50         
pF1KB8 MKEDQVVAEEPGFQDEEESLF-QDIDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRAL
                      ::::.  : :. :.. :::. :.:::. .:. :.... .. .. :
CCDS10 MAMQMQLEANADTSVEEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKEL
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB8 CNVKGLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESM
        :.::.::::.:::   : ::.  :: :: :. ..:. ...:::::.:.:::: ::::. 
CCDS10 INIKGISEAKADKILAEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETG
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KB8 AITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNV
       .::: ::::::::::. ::: :: :::   :   :: ..::::.::::.::  .:.:...
CCDS10 SITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGL
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KB8 DHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGEL
       . . ::::: ::::....:: .:: : :. .  :.  . :::.::  ::.:.:.::::::
CCDS10 SGSDVLDNVAYARAFNTDHQTQLL-YQASAMMVESR-YALLIVDSATALYRTDYSGRGEL
              190       200        210        220       230        

     240       250       260       270        280       290        
pF1KB8 AERQQKLAQMLSRLQKISEEYNVAVFVTNQMTAD-PGATMTFQADPKKPIGGHILAHAST
       . ::..::..:  : ....:..::: .:::..:.  ::.: : :::::::::.:.:::::
CCDS10 SARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAM-FAADPKKPIGGNIIAHAST
      240       250       260       270        280       290       

      300       310       320       330       340
pF1KB8 TRISLRKGRGELRIAKIYDSPEMPENEATFAITAGGIGDAKE
       ::. ::::::: :: :::::: .:: :: :::.: :.::::.
CCDS10 TRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGVGDAKD
       300       310       320       330         

>>CCDS53931.1 RAD51 gene_id:5888|Hs108|chr15              (340 aa)
 initn: 1033 init1: 497 opt: 948  Z-score: 1249.0  bits: 239.5 E(32554): 3e-63
Smith-Waterman score: 948; 50.1% identity (75.2% similar) in 335 aa overlap (16-340:16-340)

               10        20         30        40        50         
pF1KB8 MKEDQVVAEEPGFQDEEESLF-QDIDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRAL
                      ::::.  : :. :.. :::. :.:::. .:. :.... .. .. :
CCDS53 MAMQMQLEANADTSVEEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKEL
               10        20        30        40        50        60

      60        70        80        90       100             110   
pF1KB8 CNVKGLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHIT--TGSQEF----DKLLG
        :.::.::::.:::      : :   .. .:  ..  .:.     .::..     ....:
CCDS53 INIKGISEAKADKI------LTESRSVARLE-CNSVILVYCTLRLSGSSDSPASASRVVG
               70              80         90       100       110   

             120       130       140       150       160       170 
pF1KB8 --GGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLR
         ::::. .::: ::::::::::. ::: :: :::   :   :: ..::::.::::.:: 
CCDS53 TTGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLL
           120       130       140       150       160       170   

             180       190       200       210       220       230 
pF1KB8 DIADRFNVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRV
        .:.:.... . ::::: ::::....:: .:: : :. .  :.  . :::.::  ::.:.
CCDS53 AVAERYGLSGSDVLDNVAYARAFNTDHQTQLL-YQASAMMVESR-YALLIVDSATALYRT
           180       190       200        210        220       230 

             240       250       260       270        280       290
pF1KB8 DFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTAD-PGATMTFQADPKKPIGG
       :.::::::. ::..::..:  : ....:..::: .:::..:.  ::.: : :::::::::
CCDS53 DYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAM-FAADPKKPIGG
             240       250       260       270        280       290

              300       310       320       330       340
pF1KB8 HILAHASTTRISLRKGRGELRIAKIYDSPEMPENEATFAITAGGIGDAKE
       .:.:::::::. ::::::: :: :::::: .:: :: :::.: :.::::.
CCDS53 NIIAHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGVGDAKD
              300       310       320       330       340

>>CCDS63477.1 DMC1 gene_id:11144|Hs108|chr22              (285 aa)
 initn: 1804 init1: 919 opt: 919  Z-score: 1211.9  bits: 232.4 E(32554): 3.5e-61
Smith-Waterman score: 1698; 83.5% identity (83.8% similar) in 340 aa overlap (1-340:1-285)

               10        20        30        40        50        60
pF1KB8 MKEDQVVAEEPGFQDEEESLFQDIDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 MKEDQVVAEEPGFQDEEESLFQDIDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 NVKGLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 NVKGLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 ITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNVD
       ::::::::::::::::::::                                        
CCDS63 ITEAFGEFRTGKTQLSHTLC----------------------------------------
              130       140                                        

              190       200       210       220       230       240
pF1KB8 HDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELA
                      .::::::::::::::::::::::::::::::::::::::::::::
CCDS63 ---------------GEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELA
                             150       160       170       180     

              250       260       270       280       290       300
pF1KB8 ERQQKLAQMLSRLQKISEEYNVAVFVTNQMTADPGATMTFQADPKKPIGGHILAHASTTR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 ERQQKLAQMLSRLQKISEEYNVAVFVTNQMTADPGATMTFQADPKKPIGGHILAHASTTR
         190       200       210       220       230       240     

              310       320       330       340
pF1KB8 ISLRKGRGELRIAKIYDSPEMPENEATFAITAGGIGDAKE
       ::::::::::::::::::::::::::::::::::::::::
CCDS63 ISLRKGRGELRIAKIYDSPEMPENEATFAITAGGIGDAKE
         250       260       270       280     

>>CCDS53932.1 RAD51 gene_id:5888|Hs108|chr15              (280 aa)
 initn: 788 init1: 615 opt: 756  Z-score: 997.2  bits: 192.6 E(32554): 3.2e-49
Smith-Waterman score: 756; 50.6% identity (77.6% similar) in 245 aa overlap (16-259:16-258)

               10        20         30        40        50         
pF1KB8 MKEDQVVAEEPGFQDEEESLF-QDIDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRAL
                      ::::.  : :. :.. :::. :.:::. .:. :.... .. .. :
CCDS53 MAMQMQLEANADTSVEEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKEL
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB8 CNVKGLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESM
        :.::.::::.:::   : ::.  :: :: :. ..:. ...:::::.:.:::: ::::. 
CCDS53 INIKGISEAKADKILAEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETG
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KB8 AITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNV
       .::: ::::::::::. ::: :: :::   :   :: ..::::.::::.::  .:.:...
CCDS53 SITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGL
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KB8 DHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGEL
       . . ::::: ::::....:: .:: : :. .  :.  . :::.::  ::.:.:.::::::
CCDS53 SGSDVLDNVAYARAFNTDHQTQLL-YQASAMMVESR-YALLIVDSATALYRTDYSGRGEL
              190       200        210        220       230        

     240       250       260       270       280       290         
pF1KB8 AERQQKLAQMLSRLQKISEEYNVAVFVTNQMTADPGATMTFQADPKKPIGGHILAHASTT
       . ::..::..:  : ....:                                        
CCDS53 SARQMHLARFLRMLLRLADEIVSEERKRGNQNLQNLRLSLSS                  
      240       250       260       270       280                  

>>CCDS9790.1 RAD51B gene_id:5890|Hs108|chr14              (350 aa)
 initn: 256 init1: 137 opt: 314  Z-score: 413.1  bits: 84.9 E(32554): 1.1e-16
Smith-Waterman score: 323; 26.3% identity (54.3% similar) in 339 aa overlap (27-335:6-342)

               10        20        30        40        50        60
pF1KB8 MKEDQVVAEEPGFQDEEESLFQDIDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALC
                                 :.. :..     .:.   : : . .   .   : 
CCDS97                      MGSKKLKRVGLSQELCDRLSRHQILTCQDFLCLSPLELM
                                    10        20        30         

               70        80        90       100          110       
pF1KB8 NVKGLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFH---ITTGSQEFDKLLGGGIE
       .: :::   : ..   ...   : . ::.  . .:.  :    ..:  . .:. : ::. 
CCDS97 KVTGLSYRGVHELLCMVSRACAPKMQTAYGIKAQRSADFSPAFLSTTLSALDEALHGGVA
      40        50        60        70        80        90         

       120       130       140       150       160       170       
pF1KB8 SMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADR-
         ..::  :    ::::.   . . : ::   :   : ...::::..:  .:: .::.  
CCDS97 CGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAESR
     100       110       120       130       140       150         

            180         190       200       210       220       230
pF1KB8 ----FNVDHDAVLDN--VLYARAYTSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFR
           ::...  .: .  :   :  : .. .. .. .  ..  . :: ::.:.::. .. :
CCDS97 FPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIISK-GI-KLVILDSVASVVR
     160       170       180       190       200         210       

                240       250       260       270       280        
pF1KB8 VDFSGR--GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTADPGATMTFQADPKKPI
        .:...  :.: ::.. ::.  : :. ..::... :..:::.:.  ..... :::  .: 
CCDS97 KEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITTHLSGALASQADLVSPA
       220       230       240       250       260       270       

                        290       300       310       320       330
pF1KB8 G------------------GHILAHASTTRISLRKGRGELRIAKIYDSPEMPENEATFAI
                          :.  .:. .::. :.   .: :   :  ::  : .  ...:
CCDS97 DDLSLSEGTSGSSCVIAALGNTWSHSVNTRLILQYLDSERRQILIAKSPLAPFTSFVYTI
       280       290       300       310       320       330       

              340   
pF1KB8 TAGGIGDAKE   
          :.        
CCDS97 KEEGLVLQGQEKP
       340       350

>>CCDS9789.1 RAD51B gene_id:5890|Hs108|chr14              (384 aa)
 initn: 256 init1: 137 opt: 314  Z-score: 412.4  bits: 84.9 E(32554): 1.2e-16
Smith-Waterman score: 323; 26.3% identity (54.3% similar) in 339 aa overlap (27-335:6-342)

               10        20        30        40        50        60
pF1KB8 MKEDQVVAEEPGFQDEEESLFQDIDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALC
                                 :.. :..     .:.   : : . .   .   : 
CCDS97                      MGSKKLKRVGLSQELCDRLSRHQILTCQDFLCLSPLELM
                                    10        20        30         

               70        80        90       100          110       
pF1KB8 NVKGLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFH---ITTGSQEFDKLLGGGIE
       .: :::   : ..   ...   : . ::.  . .:.  :    ..:  . .:. : ::. 
CCDS97 KVTGLSYRGVHELLCMVSRACAPKMQTAYGIKAQRSADFSPAFLSTTLSALDEALHGGVA
      40        50        60        70        80        90         

       120       130       140       150       160       170       
pF1KB8 SMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADR-
         ..::  :    ::::.   . . : ::   :   : ...::::..:  .:: .::.  
CCDS97 CGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAESR
     100       110       120       130       140       150         

            180         190       200       210       220       230
pF1KB8 ----FNVDHDAVLDN--VLYARAYTSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFR
           ::...  .: .  :   :  : .. .. .. .  ..  . :: ::.:.::. .. :
CCDS97 FPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIISK-GI-KLVILDSVASVVR
     160       170       180       190       200         210       

                240       250       260       270       280        
pF1KB8 VDFSGR--GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTADPGATMTFQADPKKPI
        .:...  :.: ::.. ::.  : :. ..::... :..:::.:.  ..... :::  .: 
CCDS97 KEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITTHLSGALASQADLVSPA
       220       230       240       250       260       270       

                        290       300       310       320       330
pF1KB8 G------------------GHILAHASTTRISLRKGRGELRIAKIYDSPEMPENEATFAI
                          :.  .:. .::. :.   .: :   :  ::  : .  ...:
CCDS97 DDLSLSEGTSGSSCVIAALGNTWSHSVNTRLILQYLDSERRQILIAKSPLAPFTSFVYTI
       280       290       300       310       320       330       

              340                                     
pF1KB8 TAGGIGDAKE                                     
          :.                                          
CCDS97 KEEGLVLQETTFCSVTQAELNWAPEILPPQPPEQLGLQMCHHTQLIF
       340       350       360       370       380    

>>CCDS81815.1 RAD51B gene_id:5890|Hs108|chr14             (425 aa)
 initn: 256 init1: 137 opt: 314  Z-score: 411.8  bits: 84.9 E(32554): 1.3e-16
Smith-Waterman score: 323; 26.3% identity (54.3% similar) in 339 aa overlap (27-335:6-342)

               10        20        30        40        50        60
pF1KB8 MKEDQVVAEEPGFQDEEESLFQDIDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALC
                                 :.. :..     .:.   : : . .   .   : 
CCDS81                      MGSKKLKRVGLSQELCDRLSRHQILTCQDFLCLSPLELM
                                    10        20        30         

               70        80        90       100          110       
pF1KB8 NVKGLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFH---ITTGSQEFDKLLGGGIE
       .: :::   : ..   ...   : . ::.  . .:.  :    ..:  . .:. : ::. 
CCDS81 KVTGLSYRGVHELLCMVSRACAPKMQTAYGIKAQRSADFSPAFLSTTLSALDEALHGGVA
      40        50        60        70        80        90         

       120       130       140       150       160       170       
pF1KB8 SMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADR-
         ..::  :    ::::.   . . : ::   :   : ...::::..:  .:: .::.  
CCDS81 CGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAESR
     100       110       120       130       140       150         

            180         190       200       210       220       230
pF1KB8 ----FNVDHDAVLDN--VLYARAYTSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFR
           ::...  .: .  :   :  : .. .. .. .  ..  . :: ::.:.::. .. :
CCDS81 FPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIISK-GI-KLVILDSVASVVR
     160       170       180       190       200         210       

                240       250       260       270       280        
pF1KB8 VDFSGR--GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTADPGATMTFQADPKKPI
        .:...  :.: ::.. ::.  : :. ..::... :..:::.:.  ..... :::  .: 
CCDS81 KEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITTHLSGALASQADLVSPA
       220       230       240       250       260       270       

                        290       300       310       320       330
pF1KB8 G------------------GHILAHASTTRISLRKGRGELRIAKIYDSPEMPENEATFAI
                          :.  .:. .::. :.   .: :   :  ::  : .  ...:
CCDS81 DDLSLSEGTSGSSCVIAALGNTWSHSVNTRLILQYLDSERRQILIAKSPLAPFTSFVYTI
       280       290       300       310       320       330       

              340                                                  
pF1KB8 TAGGIGDAKE                                                  
          :.                                                       
CCDS81 KEEGLVLQVVRTVARVSPRSECWSAADSHPSPTFLIPDVVLRKTRNPRLLPSVSMCPPQM
       340       350       360       370       380       390       




340 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 21:50:54 2016 done: Sat Nov  5 21:50:54 2016
 Total Scan time:  1.940 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com