Result of FASTA (omim) for
pF1KB8678
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8678, 376 aa
1>>>pF1KB8678 376 - 376 aa - 376 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3288+/-0.000461; mu= 16.0092+/- 0.029
mean_var=62.4163+/-12.348, 0's: 0 Z-trim(109.0): 39 B-trim: 60 in 1/49
Lambda= 0.162340
statistics sampled from 17154 (17192) to 17154 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.565), E-opt: 0.2 (0.202), width: 16
Scan time: 7.290
The best scores are: opt bits E(85289)
NP_005727 (OMIM: 605143) alpha-centractin [Homo sa ( 376) 2488 591.8 8.5e-169
NP_005726 (OMIM: 605144) beta-centractin [Homo sap ( 376) 2344 558.1 1.2e-158
XP_016858605 (OMIM: 605144) PREDICTED: beta-centra ( 332) 2035 485.7 6.6e-137
XP_005263911 (OMIM: 605144) PREDICTED: beta-centra ( 302) 1847 441.6 1.1e-123
NP_005150 (OMIM: 102540,612098,612794,613424) acti ( 377) 1429 343.8 3.9e-94
NP_001186883 (OMIM: 102560,604717,614583) actin, c ( 375) 1427 343.3 5.4e-94
NP_001605 (OMIM: 102560,604717,614583) actin, cyto ( 375) 1427 343.3 5.4e-94
NP_001092 (OMIM: 102630,243310,607371,608578) acti ( 375) 1426 343.1 6.3e-94
NP_001091 (OMIM: 102610,161800,255310,616852) acti ( 377) 1424 342.6 8.8e-94
NP_001135417 (OMIM: 102620,611788,613834,614042) a ( 377) 1421 341.9 1.4e-93
NP_001307784 (OMIM: 102620,611788,613834,614042) a ( 377) 1421 341.9 1.4e-93
NP_001604 (OMIM: 102620,611788,613834,614042) acti ( 377) 1421 341.9 1.4e-93
NP_001606 (OMIM: 102545) actin, gamma-enteric smoo ( 376) 1418 341.2 2.3e-93
NP_001017992 (OMIM: 614835) beta-actin-like protei ( 376) 1399 336.8 5.1e-92
XP_016859649 (OMIM: 608914) PREDICTED: POTE ankyri ( 657) 1358 327.3 6.4e-89
XP_011509518 (OMIM: 608914) PREDICTED: POTE ankyri ( 957) 1358 327.3 8.9e-89
XP_016859648 (OMIM: 608914) PREDICTED: POTE ankyri ( 967) 1358 327.3 9e-89
NP_001077007 (OMIM: 608914) POTE ankyrin domain fa (1075) 1358 327.4 9.8e-89
XP_016859650 (OMIM: 608914) PREDICTED: POTE ankyri (1075) 1358 327.4 9.8e-89
NP_001186822 (OMIM: 102545) actin, gamma-enteric s ( 333) 1102 267.2 4e-71
NP_115876 (OMIM: 608534) actin-related protein T3 ( 372) 1065 258.5 1.8e-68
NP_536356 (OMIM: 608535) actin-related protein T2 ( 377) 1036 251.7 2e-66
NP_005713 (OMIM: 604221) actin-related protein 2 i ( 394) 1001 243.6 6.1e-64
NP_612146 (OMIM: 300487) actin-related protein T1 ( 376) 999 243.1 8.1e-64
NP_001005386 (OMIM: 604221) actin-related protein ( 399) 990 241.0 3.7e-63
NP_006678 (OMIM: 604303) actin-like protein 7A [Ho ( 435) 922 225.1 2.5e-58
NP_006677 (OMIM: 604304) actin-like protein 7B [Ho ( 415) 897 219.2 1.4e-56
NP_005712 (OMIM: 604222) actin-related protein 3 i ( 418) 501 126.5 1.1e-28
NP_001264069 (OMIM: 604222) actin-related protein ( 367) 482 122.0 2.2e-27
NP_057272 (OMIM: 612458) actin-like protein 6B [Ho ( 426) 410 105.2 3e-22
NP_817126 (OMIM: 604958) actin-like protein 6A iso ( 387) 337 88.0 3.9e-17
NP_829888 (OMIM: 604958) actin-like protein 6A iso ( 387) 337 88.0 3.9e-17
NP_004292 (OMIM: 604958) actin-like protein 6A iso ( 429) 337 88.1 4.3e-17
>>NP_005727 (OMIM: 605143) alpha-centractin [Homo sapien (376 aa)
initn: 2488 init1: 2488 opt: 2488 Z-score: 3151.4 bits: 591.8 E(85289): 8.5e-169
Smith-Waterman score: 2488; 100.0% identity (100.0% similar) in 376 aa overlap (1-376:1-376)
10 20 30 40 50 60
pF1KB8 MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 SGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSK
310 320 330 340 350 360
370
pF1KB8 KEYEEDGARSIHRKTF
::::::::::::::::
NP_005 KEYEEDGARSIHRKTF
370
>>NP_005726 (OMIM: 605144) beta-centractin [Homo sapiens (376 aa)
initn: 2344 init1: 2344 opt: 2344 Z-score: 2969.2 bits: 558.1 E(85289): 1.2e-158
Smith-Waterman score: 2344; 90.4% identity (98.9% similar) in 376 aa overlap (1-376:1-376)
10 20 30 40 50 60
pF1KB8 MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP
:::::.::::::::::::::::::::::::::::::::::::::.::::::::::.::::
NP_005 MESYDIIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN
:::::::::.::::::::.:.:::::::::::::::::::::::::::::::::::: ::
NP_005 KAEEHRGLLTIRYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 REKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ
::.:::::::::.::: ::::: :::.:.:::.:..::::::::::::::::.:::::.:
NP_005 MRVDIAGRDVSRYLRLLLRKEGVDFHTSAEFEVVRTIKERACYLSINPQKDEALETEKVQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVL
: ::::::...::.:::::::::.:::.:.::::.:::..:::.:::::::::::.::::
NP_005 YTLPDGSTLDVGPARFRAPELLFQPDLVGDESEGLHEVVAFAIHKSDMDLRRTLFANIVL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 SGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSK
:::::::::::::::::::::::::.::.:::::::::::::::::::::::::::::::
NP_005 SGGSTLFKGFGDRLLSEVKKLAPKDIKIKISAPQERLYSTWIGGSILASLDTFKKMWVSK
310 320 330 340 350 360
370
pF1KB8 KEYEEDGARSIHRKTF
:::::::.:.::::::
NP_005 KEYEEDGSRAIHRKTF
370
>>XP_016858605 (OMIM: 605144) PREDICTED: beta-centractin (332 aa)
initn: 2035 init1: 2035 opt: 2035 Z-score: 2578.9 bits: 485.7 E(85289): 6.6e-137
Smith-Waterman score: 2035; 89.5% identity (98.8% similar) in 332 aa overlap (45-376:1-332)
20 30 40 50 60 70
pF1KB8 DNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSIRYP
.::::::::::.:::::::::::::.::::
XP_016 MRVMAGALEGDLFIGPKAEEHRGLLTIRYP
10 20 30
80 90 100 110 120 130
pF1KB8 MEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFETFNV
::::.:.:::::::::::::::::::::::::::::::::::: ::::.:::::::::::
XP_016 MEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNREKAAEVFFETFNV
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB8 PALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVSRFL
::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::.:
XP_016 PALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVSRYL
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB8 RLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQYYLPDGSTIEIGPS
:: ::::: :::.:.:::.:..::::::::::::::::.:::::.:: ::::::...::.
XP_016 RLLLRKEGVDFHTSAEFEVVRTIKERACYLSINPQKDEALETEKVQYTLPDGSTLDVGPA
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB8 RFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLFKGFGDRL
:::::::::.:::.:.::::.:::..:::.:::::::::::.::::::::::::::::::
XP_016 RFRAPELLFQPDLVGDESEGLHEVVAFAIHKSDMDLRRTLFANIVLSGGSTLFKGFGDRL
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB8 LSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGARSIHRK
:::::::::::.::.::::::::::::::::::::::::::::::::::::::.:.::::
XP_016 LSEVKKLAPKDIKIKISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGSRAIHRK
280 290 300 310 320 330
pF1KB8 TF
::
XP_016 TF
>>XP_005263911 (OMIM: 605144) PREDICTED: beta-centractin (302 aa)
initn: 1847 init1: 1847 opt: 1847 Z-score: 2341.6 bits: 441.6 E(85289): 1.1e-123
Smith-Waterman score: 1847; 89.4% identity (98.7% similar) in 302 aa overlap (75-376:1-302)
50 60 70 80 90 100
pF1KB8 VRVMAGALEGDIFIGPKAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSE
::::.:.:::::::::::::::::::::::
XP_005 MEHGVVRDWNDMERIWQYVYSKDQLQTFSE
10 20 30
110 120 130 140 150 160
pF1KB8 EHPVLLTEAPLNPRKNRERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGV
::::::::::::: ::::.:::::::::::::::::::::::::::::::::::::::::
XP_005 EHPVLLTEAPLNPSKNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGV
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB8 THAVPIYEGFAMPHSIMRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYL
::::::::::::::::::.:::::::::.::: ::::: :::.:.:::.:..::::::::
XP_005 THAVPIYEGFAMPHSIMRVDIAGRDVSRYLRLLLRKEGVDFHTSAEFEVVRTIKERACYL
100 110 120 130 140 150
230 240 250 260 270 280
pF1KB8 SINPQKDETLETEKAQYYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQ
::::::::.:::::.:: ::::::...::.:::::::::.:::.:.::::.:::..:::.
XP_005 SINPQKDEALETEKVQYTLPDGSTLDVGPARFRAPELLFQPDLVGDESEGLHEVVAFAIH
160 170 180 190 200 210
290 300 310 320 330 340
pF1KB8 KSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGG
:::::::::::.:::::::::::::::::::::::::::::.::.:::::::::::::::
XP_005 KSDMDLRRTLFANIVLSGGSTLFKGFGDRLLSEVKKLAPKDIKIKISAPQERLYSTWIGG
220 230 240 250 260 270
350 360 370
pF1KB8 SILASLDTFKKMWVSKKEYEEDGARSIHRKTF
:::::::::::::::::::::::.:.::::::
XP_005 SILASLDTFKKMWVSKKEYEEDGSRAIHRKTF
280 290 300
>>NP_005150 (OMIM: 102540,612098,612794,613424) actin, a (377 aa)
initn: 1421 init1: 571 opt: 1429 Z-score: 1811.0 bits: 343.8 E(85289): 3.9e-94
Smith-Waterman score: 1429; 53.7% identity (82.1% similar) in 369 aa overlap (12-376:10-377)
10 20 30 40 50 60
pF1KB8 MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP
.: :::::..:::::::. :. ::. ::::.: ::.: . : ..:
NP_005 MCDDEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN
.:. .::.:...::.::::. .:.:::.::.... ..:.. ::::.:::::::::. :
NP_005 EAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFY-NELRVAPEEHPTLLTEAPLNPKAN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB8 RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
::. ....::::::::.....::::::::.:::::.:::::::::: ::::::.:.::.:
NP_005 REKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAI
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB8 MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ
::.:.::::.. .: : ..::.: ...: :::. :::. ::.... ... . . ...
NP_005 MRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSS
180 190 200 210 220 230
250 260 270 280 290
pF1KB8 ----YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFS
: ::::..: :: ::: :: ::.:..:: :: ::::. .:.: :.:.:. :..
NP_005 LEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYA
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB8 NIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKM
: :::::.:.. :..::. .:. :::. .::.: :: :: ::.::::::::::.::..:
NP_005 NNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM
300 310 320 330 340 350
360 370
pF1KB8 WVSKKEYEEDGARSIHRKTF
:.::.::.: : .::: :
NP_005 WISKQEYDEAGPSIVHRKCF
360 370
>>NP_001186883 (OMIM: 102560,604717,614583) actin, cytop (375 aa)
initn: 1422 init1: 570 opt: 1427 Z-score: 1808.5 bits: 343.3 E(85289): 5.4e-94
Smith-Waterman score: 1427; 53.4% identity (82.7% similar) in 369 aa overlap (12-376:8-375)
10 20 30 40 50 60
pF1KB8 MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP
.:::::::. :::::::. :. ::. ::::.: ::.: . : ..:
NP_001 MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN
.:. .::.:...::.::::: .:.:::.::.... ..:.. ::::::::::::::. :
NP_001 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKAN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB8 RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
::. ....:::::.::.....::::::::.:::::.:.::::::::.::::::.:.::.:
NP_001 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAI
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB8 MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ
.:.:.::::.. .: : ..::.: ...: :::. :::. ::.... ... . . ...
NP_001 LRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSS
180 190 200 210 220 230
250 260 270 280 290
pF1KB8 ----YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFS
: ::::..: :: ::: :: ::.:...: :: ::::. .:.: :.:.:. :..
NP_001 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYA
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB8 NIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKM
: :::::.:.. :..::. .:. :::. .::.: :: :: ::.::::::::::.::..:
NP_001 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM
300 310 320 330 340 350
360 370
pF1KB8 WVSKKEYEEDGARSIHRKTF
:.::.::.:.: .::: :
NP_001 WISKQEYDESGPSIVHRKCF
360 370
>>NP_001605 (OMIM: 102560,604717,614583) actin, cytoplas (375 aa)
initn: 1422 init1: 570 opt: 1427 Z-score: 1808.5 bits: 343.3 E(85289): 5.4e-94
Smith-Waterman score: 1427; 53.4% identity (82.7% similar) in 369 aa overlap (12-376:8-375)
10 20 30 40 50 60
pF1KB8 MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP
.:::::::. :::::::. :. ::. ::::.: ::.: . : ..:
NP_001 MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN
.:. .::.:...::.::::: .:.:::.::.... ..:.. ::::::::::::::. :
NP_001 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKAN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB8 RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
::. ....:::::.::.....::::::::.:::::.:.::::::::.::::::.:.::.:
NP_001 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAI
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB8 MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ
.:.:.::::.. .: : ..::.: ...: :::. :::. ::.... ... . . ...
NP_001 LRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSS
180 190 200 210 220 230
250 260 270 280 290
pF1KB8 ----YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFS
: ::::..: :: ::: :: ::.:...: :: ::::. .:.: :.:.:. :..
NP_001 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYA
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB8 NIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKM
: :::::.:.. :..::. .:. :::. .::.: :: :: ::.::::::::::.::..:
NP_001 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM
300 310 320 330 340 350
360 370
pF1KB8 WVSKKEYEEDGARSIHRKTF
:.::.::.:.: .::: :
NP_001 WISKQEYDESGPSIVHRKCF
360 370
>>NP_001092 (OMIM: 102630,243310,607371,608578) actin, c (375 aa)
initn: 1412 init1: 570 opt: 1426 Z-score: 1807.2 bits: 343.1 E(85289): 6.3e-94
Smith-Waterman score: 1426; 53.1% identity (82.7% similar) in 369 aa overlap (12-376:8-375)
10 20 30 40 50 60
pF1KB8 MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP
.:.:::::. :::::::. :. ::. ::::.: ::.: . : ..:
NP_001 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN
.:. .::.:...::.::::: .:.:::.::.... ..:.. ::::::::::::::. :
NP_001 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKAN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB8 RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
::. ....:::::.::.....::::::::.:::::.:.::::::::.::::::.:.::.:
NP_001 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAI
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB8 MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ
.:.:.::::.. .: : ..::.: ...: :::. :::. ::.... ... . . ...
NP_001 LRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSS
180 190 200 210 220 230
250 260 270 280 290
pF1KB8 ----YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFS
: ::::..: :: ::: :: ::.:...: :: ::::. .:.: :.:.:. :..
NP_001 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYA
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB8 NIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKM
: :::::.:.. :..::. .:. :::. .::.: :: :: ::.::::::::::.::..:
NP_001 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM
300 310 320 330 340 350
360 370
pF1KB8 WVSKKEYEEDGARSIHRKTF
:.::.::.:.: .::: :
NP_001 WISKQEYDESGPSIVHRKCF
360 370
>>NP_001091 (OMIM: 102610,161800,255310,616852) actin, a (377 aa)
initn: 1416 init1: 571 opt: 1424 Z-score: 1804.7 bits: 342.6 E(85289): 8.8e-94
Smith-Waterman score: 1424; 53.1% identity (82.1% similar) in 369 aa overlap (12-376:10-377)
10 20 30 40 50 60
pF1KB8 MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP
.: :::::..:::::::. :. ::. ::::.: ::.: . : ..:
NP_001 MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN
.:. .::.:...::.::::. .:.:::.::.... ..:.. ::::.:::::::::. :
NP_001 EAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFY-NELRVAPEEHPTLLTEAPLNPKAN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB8 RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
::. ....::::::::.....::::::::.:::::.:::::::::: ::::::.:.::.:
NP_001 REKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAI
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB8 MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ
::.:.::::.. .: : ..::.: ...: :::. :::. ::.... ... . . ...
NP_001 MRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSS
180 190 200 210 220 230
250 260 270 280 290
pF1KB8 ----YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFS
: ::::..: :: ::: :: ::.:..:: :: ::::. .:.: :.:.:. :..
NP_001 LEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYA
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB8 NIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKM
: :.:::.:.. :..::. .:. :::. .::.: :: :: ::.::::::::::.::..:
NP_001 NNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM
300 310 320 330 340 350
360 370
pF1KB8 WVSKKEYEEDGARSIHRKTF
:..:.::.: : .::: :
NP_001 WITKQEYDEAGPSIVHRKCF
360 370
>>NP_001135417 (OMIM: 102620,611788,613834,614042) actin (377 aa)
initn: 1413 init1: 571 opt: 1421 Z-score: 1800.9 bits: 341.9 E(85289): 1.4e-93
Smith-Waterman score: 1421; 53.7% identity (81.6% similar) in 369 aa overlap (12-376:10-377)
10 20 30 40 50 60
pF1KB8 MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP
.: :::::. :::::::. :. ::. ::::.: ::.: . : ..:
NP_001 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN
.:. .::.:...::.::::. .:.:::.::.. . ..:.. ::::.:::::::::. :
NP_001 EAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFY-NELRVAPEEHPTLLTEAPLNPKAN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB8 RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
::. ....::::::::.....::::::::.:::::.:::::::::: ::::::.:.::.:
NP_001 REKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAI
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB8 MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ
::.:.::::.. .: : ..::.: ...: :::. :::. ::.... ... . . ...
NP_001 MRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSS
180 190 200 210 220 230
250 260 270 280 290
pF1KB8 ----YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFS
: ::::..: :: ::: :: ::.:..:: :: ::::. .:.: :.:.:. :..
NP_001 LEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYA
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB8 NIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKM
: :::::.:.. :..::. .:. :::. .::.: :: :: ::.::::::::::.::..:
NP_001 NNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM
300 310 320 330 340 350
360 370
pF1KB8 WVSKKEYEEDGARSIHRKTF
:.::.::.: : .::: :
NP_001 WISKQEYDEAGPSIVHRKCF
360 370
376 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 14:30:44 2016 done: Fri Nov 4 14:30:45 2016
Total Scan time: 7.290 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]