Result of FASTA (omim) for
pF1KB8683
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8683, 672 aa
1>>>pF1KB8683 672 - 672 aa - 672 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.9198+/-0.000482; mu= 7.4511+/- 0.030
mean_var=145.4565+/-29.730, 0's: 0 Z-trim(113.3): 77 B-trim: 0 in 0/50
Lambda= 0.106343
statistics sampled from 22456 (22533) to 22456 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.617), E-opt: 0.2 (0.264), width: 16
Scan time: 11.730
The best scores are: opt bits E(85289)
NP_113609 (OMIM: 617092,617095) tetratricopeptide ( 672) 4393 686.5 8.7e-197
XP_011523625 (OMIM: 617092,617095) PREDICTED: tetr ( 509) 3315 521.0 4.2e-147
XP_011523626 (OMIM: 617092,617095) PREDICTED: tetr ( 480) 2963 467.0 7.3e-131
NP_001269582 (OMIM: 605063) stress-induced-phospho ( 519) 207 44.2 0.0015
XP_011539605 (OMIM: 604213,609245) PREDICTED: G-pr ( 458) 193 42.0 0.0059
XP_006710652 (OMIM: 604213,609245) PREDICTED: G-pr ( 665) 193 42.1 0.0081
XP_016856587 (OMIM: 604213,609245) PREDICTED: G-pr ( 684) 193 42.1 0.0083
NP_001307968 (OMIM: 604213,609245) G-protein-signa ( 684) 193 42.1 0.0083
XP_011539603 (OMIM: 604213,609245) PREDICTED: G-pr ( 684) 193 42.1 0.0083
NP_001307967 (OMIM: 604213,609245) G-protein-signa ( 684) 193 42.1 0.0083
XP_011539604 (OMIM: 604213,609245) PREDICTED: G-pr ( 684) 193 42.1 0.0083
XP_016856586 (OMIM: 604213,609245) PREDICTED: G-pr ( 684) 193 42.1 0.0083
NP_037428 (OMIM: 604213,609245) G-protein-signalin ( 684) 193 42.1 0.0083
>>NP_113609 (OMIM: 617092,617095) tetratricopeptide repe (672 aa)
initn: 4393 init1: 4393 opt: 4393 Z-score: 3653.9 bits: 686.5 E(85289): 8.7e-197
Smith-Waterman score: 4393; 100.0% identity (100.0% similar) in 672 aa overlap (1-672:1-672)
10 20 30 40 50 60
pF1KB8 MSDPEGETLRSTFPSYMAEGERLYLCGEFSKAAQSFSNALYLQDGDKNCLVARSKCFLKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 MSDPEGETLRSTFPSYMAEGERLYLCGEFSKAAQSFSNALYLQDGDKNCLVARSKCFLKM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 GDLERSLKDAEASLQSDPAFCKGILQKAETLYTMGDFEFALVFYHRGYKLRPDREFRVGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 GDLERSLKDAEASLQSDPAFCKGILQKAETLYTMGDFEFALVFYHRGYKLRPDREFRVGI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 QKAQEAINNSVGSPSSIKLENKGDLSFLSKQAENIKAQQKPQPMKHLLHPTKGEPKWKAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 QKAQEAINNSVGSPSSIKLENKGDLSFLSKQAENIKAQQKPQPMKHLLHPTKGEPKWKAS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 LKSEKTVRQLLGELYVDKEYLEKLLLDEDLIKGTMKGGLTVEDLIMTGINYLDTHSNFWR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 LKSEKTVRQLLGELYVDKEYLEKLLLDEDLIKGTMKGGLTVEDLIMTGINYLDTHSNFWR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 QQKPIYARERDRKLMQEKWLRDHKRRPSQTAHYILKSLEDIDMLLTSGSAEGSLQKAEKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 QQKPIYARERDRKLMQEKWLRDHKRRPSQTAHYILKSLEDIDMLLTSGSAEGSLQKAEKV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 LKKVLEWNKEEVPNKDELVGNLYSCIGNAQIELGQMEAALQSHRKDLEIAKEYDLPDAKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 LKKVLEWNKEEVPNKDELVGNLYSCIGNAQIELGQMEAALQSHRKDLEIAKEYDLPDAKS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 RALDNIGRVFARVGKFQQAIDTWEEKIPLAKTTLEKTWLFHEIGRCYLELDQAWQAQNYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 RALDNIGRVFARVGKFQQAIDTWEEKIPLAKTTLEKTWLFHEIGRCYLELDQAWQAQNYG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 EKSQQCAEEEGDIEWQLNASVLVAQAQVKLRDFESAVNNFEKALERAKLVHNNEAQQAII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 EKSQQCAEEEGDIEWQLNASVLVAQAQVKLRDFESAVNNFEKALERAKLVHNNEAQQAII
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 SALDDANKGIIRELRKTNYVENLKEKSEGEASLYEDRIITREKDMRRVRDEPEKVVKQWD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 SALDDANKGIIRELRKTNYVENLKEKSEGEASLYEDRIITREKDMRRVRDEPEKVVKQWD
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB8 HSEDEKETDEDDEAFGEALQSPASGKQSVEAGKARSDLGAVAKGLSGELGTRSGETGRKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 HSEDEKETDEDDEAFGEALQSPASGKQSVEAGKARSDLGAVAKGLSGELGTRSGETGRKL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB8 LEAGRRESREIYRRPSGELEQRLSGEFSRQEPEELKKLSEVGRREPEELGKTQFGEIGET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 LEAGRRESREIYRRPSGELEQRLSGEFSRQEPEELKKLSEVGRREPEELGKTQFGEIGET
610 620 630 640 650 660
670
pF1KB8 KKTGNEMEKEYE
::::::::::::
NP_113 KKTGNEMEKEYE
670
>>XP_011523625 (OMIM: 617092,617095) PREDICTED: tetratri (509 aa)
initn: 3315 init1: 3315 opt: 3315 Z-score: 2761.9 bits: 521.0 E(85289): 4.2e-147
Smith-Waterman score: 3315; 100.0% identity (100.0% similar) in 509 aa overlap (164-672:1-509)
140 150 160 170 180 190
pF1KB8 PSSIKLENKGDLSFLSKQAENIKAQQKPQPMKHLLHPTKGEPKWKASLKSEKTVRQLLGE
::::::::::::::::::::::::::::::
XP_011 MKHLLHPTKGEPKWKASLKSEKTVRQLLGE
10 20 30
200 210 220 230 240 250
pF1KB8 LYVDKEYLEKLLLDEDLIKGTMKGGLTVEDLIMTGINYLDTHSNFWRQQKPIYARERDRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LYVDKEYLEKLLLDEDLIKGTMKGGLTVEDLIMTGINYLDTHSNFWRQQKPIYARERDRK
40 50 60 70 80 90
260 270 280 290 300 310
pF1KB8 LMQEKWLRDHKRRPSQTAHYILKSLEDIDMLLTSGSAEGSLQKAEKVLKKVLEWNKEEVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LMQEKWLRDHKRRPSQTAHYILKSLEDIDMLLTSGSAEGSLQKAEKVLKKVLEWNKEEVP
100 110 120 130 140 150
320 330 340 350 360 370
pF1KB8 NKDELVGNLYSCIGNAQIELGQMEAALQSHRKDLEIAKEYDLPDAKSRALDNIGRVFARV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NKDELVGNLYSCIGNAQIELGQMEAALQSHRKDLEIAKEYDLPDAKSRALDNIGRVFARV
160 170 180 190 200 210
380 390 400 410 420 430
pF1KB8 GKFQQAIDTWEEKIPLAKTTLEKTWLFHEIGRCYLELDQAWQAQNYGEKSQQCAEEEGDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GKFQQAIDTWEEKIPLAKTTLEKTWLFHEIGRCYLELDQAWQAQNYGEKSQQCAEEEGDI
220 230 240 250 260 270
440 450 460 470 480 490
pF1KB8 EWQLNASVLVAQAQVKLRDFESAVNNFEKALERAKLVHNNEAQQAIISALDDANKGIIRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EWQLNASVLVAQAQVKLRDFESAVNNFEKALERAKLVHNNEAQQAIISALDDANKGIIRE
280 290 300 310 320 330
500 510 520 530 540 550
pF1KB8 LRKTNYVENLKEKSEGEASLYEDRIITREKDMRRVRDEPEKVVKQWDHSEDEKETDEDDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRKTNYVENLKEKSEGEASLYEDRIITREKDMRRVRDEPEKVVKQWDHSEDEKETDEDDE
340 350 360 370 380 390
560 570 580 590 600 610
pF1KB8 AFGEALQSPASGKQSVEAGKARSDLGAVAKGLSGELGTRSGETGRKLLEAGRRESREIYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AFGEALQSPASGKQSVEAGKARSDLGAVAKGLSGELGTRSGETGRKLLEAGRRESREIYR
400 410 420 430 440 450
620 630 640 650 660 670
pF1KB8 RPSGELEQRLSGEFSRQEPEELKKLSEVGRREPEELGKTQFGEIGETKKTGNEMEKEYE
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RPSGELEQRLSGEFSRQEPEELKKLSEVGRREPEELGKTQFGEIGETKKTGNEMEKEYE
460 470 480 490 500
>>XP_011523626 (OMIM: 617092,617095) PREDICTED: tetratri (480 aa)
initn: 2963 init1: 2963 opt: 2963 Z-score: 2470.4 bits: 467.0 E(85289): 7.3e-131
Smith-Waterman score: 2963; 100.0% identity (100.0% similar) in 447 aa overlap (1-447:1-447)
10 20 30 40 50 60
pF1KB8 MSDPEGETLRSTFPSYMAEGERLYLCGEFSKAAQSFSNALYLQDGDKNCLVARSKCFLKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSDPEGETLRSTFPSYMAEGERLYLCGEFSKAAQSFSNALYLQDGDKNCLVARSKCFLKM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 GDLERSLKDAEASLQSDPAFCKGILQKAETLYTMGDFEFALVFYHRGYKLRPDREFRVGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GDLERSLKDAEASLQSDPAFCKGILQKAETLYTMGDFEFALVFYHRGYKLRPDREFRVGI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 QKAQEAINNSVGSPSSIKLENKGDLSFLSKQAENIKAQQKPQPMKHLLHPTKGEPKWKAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QKAQEAINNSVGSPSSIKLENKGDLSFLSKQAENIKAQQKPQPMKHLLHPTKGEPKWKAS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 LKSEKTVRQLLGELYVDKEYLEKLLLDEDLIKGTMKGGLTVEDLIMTGINYLDTHSNFWR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LKSEKTVRQLLGELYVDKEYLEKLLLDEDLIKGTMKGGLTVEDLIMTGINYLDTHSNFWR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 QQKPIYARERDRKLMQEKWLRDHKRRPSQTAHYILKSLEDIDMLLTSGSAEGSLQKAEKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QQKPIYARERDRKLMQEKWLRDHKRRPSQTAHYILKSLEDIDMLLTSGSAEGSLQKAEKV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 LKKVLEWNKEEVPNKDELVGNLYSCIGNAQIELGQMEAALQSHRKDLEIAKEYDLPDAKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LKKVLEWNKEEVPNKDELVGNLYSCIGNAQIELGQMEAALQSHRKDLEIAKEYDLPDAKS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 RALDNIGRVFARVGKFQQAIDTWEEKIPLAKTTLEKTWLFHEIGRCYLELDQAWQAQNYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RALDNIGRVFARVGKFQQAIDTWEEKIPLAKTTLEKTWLFHEIGRCYLELDQAWQAQNYG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 EKSQQCAEEEGDIEWQLNASVLVAQAQVKLRDFESAVNNFEKALERAKLVHNNEAQQAII
:::::::::::::::::::::::::::
XP_011 EKSQQCAEEEGDIEWQLNASVLVAQAQGLGRCQQGYHQRTEENQLRGESQRKKRGRSFTV
430 440 450 460 470 480
>>NP_001269582 (OMIM: 605063) stress-induced-phosphoprot (519 aa)
initn: 119 init1: 89 opt: 207 Z-score: 184.8 bits: 44.2 E(85289): 0.0015
Smith-Waterman score: 207; 26.2% identity (56.9% similar) in 160 aa overlap (19-170:342-501)
10 20 30 40
pF1KB8 MSDPEGETLRSTFPSYMAEGERLYLCGEFSKAAQSFSNALYLQDGDKN
.:.. . :.. .: . ...:. . : .
NP_001 LKKCQQAEKILKEQERLAYINPDLALEEKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAK
320 330 340 350 360 370
50 60 70 80 90 100
pF1KB8 CLVARSKCFLKMGDLERSLKDAEASLQSDPAFCKGILQKAETLYTMGDFEFALVFYHRGY
:. :. :. ... .::: : .: .:.: :: .:: .: .: :. :. :...
NP_001 LYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKAL
380 390 400 410 420 430
110 120 130 140 150 160
pF1KB8 KLRPD-REFRVGIQKAQEAINNSVGSPSSIKLENKGD---LSFLSKQAENI---KAQQKP
: . .: : :. . : : :: ..: . .: ...: : . . :. :
NP_001 DLDSSCKEAADGYQRCMMAQYNRHDSPEDVKRRAMADPEVQQIMSDPAMRLILEQMQKDP
440 450 460 470 480 490
170 180 190 200 210 220
pF1KB8 QPM-KHLLHPTKGEPKWKASLKSEKTVRQLLGELYVDKEYLEKLLLDEDLIKGTMKGGLT
: . .:: .:
NP_001 QALSEHLKNPVIAQKIQKLMDVGLIAIR
500 510
>>XP_011539605 (OMIM: 604213,609245) PREDICTED: G-protei (458 aa)
initn: 252 init1: 124 opt: 193 Z-score: 174.0 bits: 42.0 E(85289): 0.0059
Smith-Waterman score: 193; 23.6% identity (58.7% similar) in 225 aa overlap (320-537:202-424)
290 300 310 320 330 340
pF1KB8 AEGSLQKAEKVLKKVLEWNKEEVPNKDELVGNLYSCIGNAQIELGQMEAALQSHRKDLEI
: .. .::.. ::... :. .:.. : :
XP_011 EEVRDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLI
180 190 200 210 220 230
350 360 370 380 390 400
pF1KB8 AKEYDLPDAKSRALDNIGRVFARVGKFQQAIDTWEEKIPLAKTTLEKT---WLFHEIGRC
:::. :. :: .:.: .. .:.:. : . ... . ::. ... . .:
XP_011 AKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNT
240 250 260 270 280 290
410 420 430 440 450 460
pF1KB8 YLELDQAWQAQNYGEKSQQCAEEEGDIEWQLNASVLVAQAQVKLRDFESAVNNFEKALER
: :.. .: .: : :.: .: . : ...: . : . ..:.. :: ::
XP_011 YTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEI
300 310 320 330 340 350
470 480 490 500 510 520
pF1KB8 AKLVHNNEAQQAIISALDDANKGIIRELRKTNYVENLKEKSEGEASL--YEDRIITRE--
.. : .. .. . . :. .. .. : .. ..:..: ..:: . .. :.
XP_011 SREVGDKSGE--LTARLNLSDLQMVLGLSYSTNNSIMSENTEIDSSLNGVRPKLGRRHSM
360 370 380 390 400
530 540 550 560 570 580
pF1KB8 KDMRRVRDEPEKVVKQWDHSEDEKETDEDDEAFGEALQSPASGKQSVEAGKARSDLGAVA
..:. .. ::::.:
XP_011 ENMELMKLTPEKVLKNQHFNVLIMRIHSMHLVQVLKIVQYTKKDIFKEI
410 420 430 440 450
>>XP_006710652 (OMIM: 604213,609245) PREDICTED: G-protei (665 aa)
initn: 282 init1: 124 opt: 193 Z-score: 171.5 bits: 42.1 E(85289): 0.0081
Smith-Waterman score: 193; 23.2% identity (58.8% similar) in 228 aa overlap (320-540:183-407)
290 300 310 320 330 340
pF1KB8 AEGSLQKAEKVLKKVLEWNKEEVPNKDELVGNLYSCIGNAQIELGQMEAALQSHRKDLEI
: .. .::.. ::... :. .:.. : :
XP_006 EEVRDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLI
160 170 180 190 200 210
350 360 370 380 390 400
pF1KB8 AKEYDLPDAKSRALDNIGRVFARVGKFQQAIDTWEEKIPLAKTTLEKT---WLFHEIGRC
:::. :. :: .:.: .. .:.:. : . ... . ::. ... . .:
XP_006 AKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNT
220 230 240 250 260 270
410 420 430 440 450 460
pF1KB8 YLELDQAWQAQNYGEKSQQCAEEEGDIEWQLNASVLVAQAQVKLRDFESAVNNFEKALER
: :.. .: .: : :.: .: . : ...: . : . ..:.. :: ::
XP_006 YTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEI
280 290 300 310 320 330
470 480 490 500 510 520
pF1KB8 AKLVHNNEAQQAIISALDDANKGIIRELRKTNYVENLKEKSEGEASL--YEDRIITRE--
.. : .. .. . . :. .. .. : .. ..:..: ..:: . .. :.
XP_006 SREVGDKSGE--LTARLNLSDLQMVLGLSYSTNNSIMSENTEIDSSLNGVRPKLGRRHSM
340 350 360 370 380 390
530 540 550 560 570 580
pF1KB8 KDMRRVRDEPEKVVKQWDHSEDEKETDEDDEAFGEALQSPASGKQSVEAGKARSDLGAVA
..:. .. :::: ..:.
XP_006 ENMELMKLTPEKV-QNWNSEILAKQKPLIAKPSAKLLFVNRLKGKKYKTNSSTKVLQDAS
400 410 420 430 440
>>XP_016856587 (OMIM: 604213,609245) PREDICTED: G-protei (684 aa)
initn: 282 init1: 124 opt: 193 Z-score: 171.4 bits: 42.1 E(85289): 0.0083
Smith-Waterman score: 193; 23.2% identity (58.8% similar) in 228 aa overlap (320-540:202-426)
290 300 310 320 330 340
pF1KB8 AEGSLQKAEKVLKKVLEWNKEEVPNKDELVGNLYSCIGNAQIELGQMEAALQSHRKDLEI
: .. .::.. ::... :. .:.. : :
XP_016 EEVRDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLI
180 190 200 210 220 230
350 360 370 380 390 400
pF1KB8 AKEYDLPDAKSRALDNIGRVFARVGKFQQAIDTWEEKIPLAKTTLEKT---WLFHEIGRC
:::. :. :: .:.: .. .:.:. : . ... . ::. ... . .:
XP_016 AKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNT
240 250 260 270 280 290
410 420 430 440 450 460
pF1KB8 YLELDQAWQAQNYGEKSQQCAEEEGDIEWQLNASVLVAQAQVKLRDFESAVNNFEKALER
: :.. .: .: : :.: .: . : ...: . : . ..:.. :: ::
XP_016 YTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEI
300 310 320 330 340 350
470 480 490 500 510 520
pF1KB8 AKLVHNNEAQQAIISALDDANKGIIRELRKTNYVENLKEKSEGEASL--YEDRIITRE--
.. : .. .. . . :. .. .. : .. ..:..: ..:: . .. :.
XP_016 SREVGDKSGE--LTARLNLSDLQMVLGLSYSTNNSIMSENTEIDSSLNGVRPKLGRRHSM
360 370 380 390 400
530 540 550 560 570 580
pF1KB8 KDMRRVRDEPEKVVKQWDHSEDEKETDEDDEAFGEALQSPASGKQSVEAGKARSDLGAVA
..:. .. :::: ..:.
XP_016 ENMELMKLTPEKV-QNWNSEILAKQKPLIAKPSAKLLFVNRLKGKKYKTNSSTKVLQDAS
410 420 430 440 450 460
>>NP_001307968 (OMIM: 604213,609245) G-protein-signaling (684 aa)
initn: 282 init1: 124 opt: 193 Z-score: 171.4 bits: 42.1 E(85289): 0.0083
Smith-Waterman score: 193; 23.2% identity (58.8% similar) in 228 aa overlap (320-540:202-426)
290 300 310 320 330 340
pF1KB8 AEGSLQKAEKVLKKVLEWNKEEVPNKDELVGNLYSCIGNAQIELGQMEAALQSHRKDLEI
: .. .::.. ::... :. .:.. : :
NP_001 EEVRDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLI
180 190 200 210 220 230
350 360 370 380 390 400
pF1KB8 AKEYDLPDAKSRALDNIGRVFARVGKFQQAIDTWEEKIPLAKTTLEKT---WLFHEIGRC
:::. :. :: .:.: .. .:.:. : . ... . ::. ... . .:
NP_001 AKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNT
240 250 260 270 280 290
410 420 430 440 450 460
pF1KB8 YLELDQAWQAQNYGEKSQQCAEEEGDIEWQLNASVLVAQAQVKLRDFESAVNNFEKALER
: :.. .: .: : :.: .: . : ...: . : . ..:.. :: ::
NP_001 YTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEI
300 310 320 330 340 350
470 480 490 500 510 520
pF1KB8 AKLVHNNEAQQAIISALDDANKGIIRELRKTNYVENLKEKSEGEASL--YEDRIITRE--
.. : .. .. . . :. .. .. : .. ..:..: ..:: . .. :.
NP_001 SREVGDKSGE--LTARLNLSDLQMVLGLSYSTNNSIMSENTEIDSSLNGVRPKLGRRHSM
360 370 380 390 400
530 540 550 560 570 580
pF1KB8 KDMRRVRDEPEKVVKQWDHSEDEKETDEDDEAFGEALQSPASGKQSVEAGKARSDLGAVA
..:. .. :::: ..:.
NP_001 ENMELMKLTPEKV-QNWNSEILAKQKPLIAKPSAKLLFVNRLKGKKYKTNSSTKVLQDAS
410 420 430 440 450 460
>>XP_011539603 (OMIM: 604213,609245) PREDICTED: G-protei (684 aa)
initn: 282 init1: 124 opt: 193 Z-score: 171.4 bits: 42.1 E(85289): 0.0083
Smith-Waterman score: 193; 23.2% identity (58.8% similar) in 228 aa overlap (320-540:202-426)
290 300 310 320 330 340
pF1KB8 AEGSLQKAEKVLKKVLEWNKEEVPNKDELVGNLYSCIGNAQIELGQMEAALQSHRKDLEI
: .. .::.. ::... :. .:.. : :
XP_011 EEVRDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLI
180 190 200 210 220 230
350 360 370 380 390 400
pF1KB8 AKEYDLPDAKSRALDNIGRVFARVGKFQQAIDTWEEKIPLAKTTLEKT---WLFHEIGRC
:::. :. :: .:.: .. .:.:. : . ... . ::. ... . .:
XP_011 AKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNT
240 250 260 270 280 290
410 420 430 440 450 460
pF1KB8 YLELDQAWQAQNYGEKSQQCAEEEGDIEWQLNASVLVAQAQVKLRDFESAVNNFEKALER
: :.. .: .: : :.: .: . : ...: . : . ..:.. :: ::
XP_011 YTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEI
300 310 320 330 340 350
470 480 490 500 510 520
pF1KB8 AKLVHNNEAQQAIISALDDANKGIIRELRKTNYVENLKEKSEGEASL--YEDRIITRE--
.. : .. .. . . :. .. .. : .. ..:..: ..:: . .. :.
XP_011 SREVGDKSGE--LTARLNLSDLQMVLGLSYSTNNSIMSENTEIDSSLNGVRPKLGRRHSM
360 370 380 390 400
530 540 550 560 570 580
pF1KB8 KDMRRVRDEPEKVVKQWDHSEDEKETDEDDEAFGEALQSPASGKQSVEAGKARSDLGAVA
..:. .. :::: ..:.
XP_011 ENMELMKLTPEKV-QNWNSEILAKQKPLIAKPSAKLLFVNRLKGKKYKTNSSTKVLQDAS
410 420 430 440 450 460
>>NP_001307967 (OMIM: 604213,609245) G-protein-signaling (684 aa)
initn: 282 init1: 124 opt: 193 Z-score: 171.4 bits: 42.1 E(85289): 0.0083
Smith-Waterman score: 193; 23.2% identity (58.8% similar) in 228 aa overlap (320-540:202-426)
290 300 310 320 330 340
pF1KB8 AEGSLQKAEKVLKKVLEWNKEEVPNKDELVGNLYSCIGNAQIELGQMEAALQSHRKDLEI
: .. .::.. ::... :. .:.. : :
NP_001 EEVRDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLI
180 190 200 210 220 230
350 360 370 380 390 400
pF1KB8 AKEYDLPDAKSRALDNIGRVFARVGKFQQAIDTWEEKIPLAKTTLEKT---WLFHEIGRC
:::. :. :: .:.: .. .:.:. : . ... . ::. ... . .:
NP_001 AKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNT
240 250 260 270 280 290
410 420 430 440 450 460
pF1KB8 YLELDQAWQAQNYGEKSQQCAEEEGDIEWQLNASVLVAQAQVKLRDFESAVNNFEKALER
: :.. .: .: : :.: .: . : ...: . : . ..:.. :: ::
NP_001 YTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEI
300 310 320 330 340 350
470 480 490 500 510 520
pF1KB8 AKLVHNNEAQQAIISALDDANKGIIRELRKTNYVENLKEKSEGEASL--YEDRIITRE--
.. : .. .. . . :. .. .. : .. ..:..: ..:: . .. :.
NP_001 SREVGDKSGE--LTARLNLSDLQMVLGLSYSTNNSIMSENTEIDSSLNGVRPKLGRRHSM
360 370 380 390 400
530 540 550 560 570 580
pF1KB8 KDMRRVRDEPEKVVKQWDHSEDEKETDEDDEAFGEALQSPASGKQSVEAGKARSDLGAVA
..:. .. :::: ..:.
NP_001 ENMELMKLTPEKV-QNWNSEILAKQKPLIAKPSAKLLFVNRLKGKKYKTNSSTKVLQDAS
410 420 430 440 450 460
672 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 14:33:07 2016 done: Fri Nov 4 14:33:09 2016
Total Scan time: 11.730 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]