Result of FASTA (ccds) for
pF1KB8705
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8705, 376 aa
1>>>pF1KB8705 376 - 376 aa - 376 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3093+/-0.000996; mu= 16.7906+/- 0.060
mean_var=73.9355+/-14.994, 0's: 0 Z-trim(105.4): 40 B-trim: 3 in 1/49
Lambda= 0.149158
statistics sampled from 8381 (8410) to 8381 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.623), E-opt: 0.2 (0.258), width: 16
Scan time: 2.710
The best scores are: opt bits E(32554)
CCDS776.1 SLC30A7 gene_id:148867|Hs108|chr1 ( 376) 2549 558.0 4.8e-159
CCDS3996.1 SLC30A5 gene_id:64924|Hs108|chr5 ( 765) 642 147.9 2.9e-35
CCDS1499.1 SLC30A1 gene_id:7779|Hs108|chr1 ( 507) 315 77.4 3.2e-14
CCDS31026.1 SLC30A10 gene_id:55532|Hs108|chr1 ( 485) 285 70.9 2.7e-12
>>CCDS776.1 SLC30A7 gene_id:148867|Hs108|chr1 (376 aa)
initn: 2549 init1: 2549 opt: 2549 Z-score: 2968.9 bits: 558.0 E(32554): 4.8e-159
Smith-Waterman score: 2549; 100.0% identity (100.0% similar) in 376 aa overlap (1-376:1-376)
10 20 30 40 50 60
pF1KB8 MLPLSIKDDEYKPPKFNLFGKISGWFRSILSDKTSRNLFFFLCLNLSFAFVELLYGIWSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MLPLSIKDDEYKPPKFNLFGKISGWFRSILSDKTSRNLFFFLCLNLSFAFVELLYGIWSN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 CLGLISDSFHMFFDSTAILAGLAASVISKWRDNDAFSYGYVRAEVLAGFVNGLFLIFTAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 CLGLISDSFHMFFDSTAILAGLAASVISKWRDNDAFSYGYVRAEVLAGFVNGLFLIFTAF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 FIFSEGVERALAPPDVHHERLLLVSILGFVVNLIGIFVFKHGGHGHSHGSGHGHSHSLFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 FIFSEGVERALAPPDVHHERLLLVSILGFVVNLIGIFVFKHGGHGHSHGSGHGHSHSLFN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 GALDQAHGHVDHCHSHEVKHGAAHSHDHAHGHGHFHSHDGPSLKETTGPSRQILQGVFLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 GALDQAHGHVDHCHSHEVKHGAAHSHDHAHGHGHFHSHDGPSLKETTGPSRQILQGVFLH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 ILADTLGSIGVIASAIMMQNFGLMIADPICSILIAILIVVSVIPLLRESVGILMQRTPPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 ILADTLGSIGVIASAIMMQNFGLMIADPICSILIAILIVVSVIPLLRESVGILMQRTPPL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 LENSLPQCYQRVQQLQGVYSLQEQHFWTLCSDVYVGTLKLIVAPDADARWILSQTHNIFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 LENSLPQCYQRVQQLQGVYSLQEQHFWTLCSDVYVGTLKLIVAPDADARWILSQTHNIFT
310 320 330 340 350 360
370
pF1KB8 QAGVRQLYVQIDFAAM
::::::::::::::::
CCDS77 QAGVRQLYVQIDFAAM
370
>>CCDS3996.1 SLC30A5 gene_id:64924|Hs108|chr5 (765 aa)
initn: 1103 init1: 510 opt: 642 Z-score: 746.7 bits: 147.9 E(32554): 2.9e-35
Smith-Waterman score: 1019; 44.0% identity (73.0% similar) in 348 aa overlap (26-372:407-727)
10 20 30 40 50
pF1KB8 MLPLSIKDDEYKPPKFNLFGKISGWFRSILSDKTSRNLFFFLCLNLSFAFVELLY
...:: .. ::..:.:::::: :.::::.:
CCDS39 YSPEGTPLYNFMGDAFQHSSQSIPRFIKESLKQILEESDSRQIFYFLCLNLLFTFVELFY
380 390 400 410 420 430
60 70 80 90 100 110
pF1KB8 GIWSNCLGLISDSFHMFFDSTAILAGLAASVISKWRDNDAFSYGYVRAEVLAGFVNGLFL
:. .: ::::::.:::.:: .:.. :: :...:.:. . ::::: : :.:.::.:::::
CCDS39 GVLTNSLGLISDGFHMLFDCSALVMGLFAALMSRWKATRIFSYGYGRIEILSGFINGLFL
440 450 460 470 480 490
120 130 140 150 160 170
pF1KB8 IFTAFFIFSEGVERALAPPDVHHERLLLVSILGFVVNLIGIFVFKHGGHGHSHGSGHGHS
: :::.: :.: : . ::.. . : ::. :..:::::: .:.:. :.:.::...:
CCDS39 IVIAFFVFMESVARLIDPPELDTHMLTPVSVGGLIVNLIGICAFSHA-HSHAHGASQGSC
500 510 520 530 540 550
180 190 200 210 220 230
pF1KB8 HSLFNGALDQAHGHVDHCHSHEVKHGAAHSHDHA-HGHGHFHSHDGPSLKETTGPSRQIL
:: :: ::: : : :. ::::: :. : ... . .
CCDS39 HS------------SDHSHSH-------HMHGHSDHGHGHSHGSAGGGMNAN-------M
560 570 580
240 250 260 270 280 290
pF1KB8 QGVFLHILADTLGSIGVIASAIMMQNFGLMIADPICSILIAILIVVSVIPLLRESVGILM
.:::::.:::::::::::.:......:: .::::.::..::::: .::.::.... .:.
CCDS39 RGVFLHVLADTLGSIGVIVSTVLIEQFGWFIADPLCSLFIAILIFLSVVPLIKDACQVLL
590 600 610 620 630 640
300 310 320 330 340 350
pF1KB8 QRTPPLLENSLPQCYQRVQQLQGVYSLQEQHFWTLCSDVYVGTLKLIVAPDADARWILSQ
: :: :. : ...:...:. : .. ::: ... .::... :. :. . :..:
CCDS39 LRLPPEYEKELHIALEKIQKIEGLISYRDPHFWRHSASIVAGTIHIQVTSDVLEQRIVQQ
650 660 670 680 690 700
360 370
pF1KB8 THNIFTQAGVRQLYVQIDFAAM
. .:. .::: .: .:..
CCDS39 VTGILKDAGVNNLTIQVEKEAYFQHMSGLSTGFHDVLAMTKQMESMKYCKDGTYIM
710 720 730 740 750 760
>>CCDS1499.1 SLC30A1 gene_id:7779|Hs108|chr1 (507 aa)
initn: 356 init1: 160 opt: 315 Z-score: 368.9 bits: 77.4 E(32554): 3.2e-14
Smith-Waterman score: 366; 26.8% identity (56.2% similar) in 377 aa overlap (36-329:6-377)
10 20 30 40 50 60
pF1KB8 IKDDEYKPPKFNLFGKISGWFRSILSDKTSRNLFFFLC-LNLSFAFV--ELLYGIWSNCL
:: .:: : :.: :. :.. . .. :
CCDS14 MGCWGRNRGRLLCMLALTFMFMVLEVVVSRVTSSL
10 20 30
70 80 90 100 110 120
pF1KB8 GLISDSFHMFFDSTAILAGLAASVISKWRD-NDAFSYGYVRAEVLAGFVNGLFLIFTAFF
...::::::. : :....:.: ... .. ..:..::::....::..:: :
CCDS14 AMLSDSFHMLSDVLALVVALVAERFARRTHATQKNTFGWIRAEVMGALVNAIFLTGLCFA
40 50 60 70 80 90
130 140 150 160 170
pF1KB8 IFSEGVERALAPPDVHHERLLL-VSILGFVVNLIGIFVFKH-------GGHGHSHGSGHG
:. :..:: . : .... ..: :.. :..::..:. .:.: .::::::: :::
CCDS14 ILLEAIERFIEPHEMQQPLVVLGVGVAGLLVNVLGLCLFHHHSGFSQDSGHGHSHG-GHG
100 110 120 130 140 150
180 190 200 210
pF1KB8 HSHSLFNGA-----------LDQAHGH------------VDHCHSHEVKHGAAHSHDHAH
:.:.: .: .. : :. .. .:. .: : ..
CCDS14 HGHGLPKGPRVKSTRPGSSDINVAPGEQGPDQEETNTLVANTSNSNGLKLDPADPENPRS
160 170 180 190 200 210
220 230 240 250
pF1KB8 G-------HGHF-HSHDGPSLKETTGPSRQILQGVFLHILADTLGSIGVIASAIMM----
: .:.. . : :.: . .. ..:::::.:.:.:::. :...:...
CCDS14 GDTVEVQVNGNLVREPDHMELEEDRA-GQLNMRGVFLHVLGDALGSVIVVVNALVFYFSW
220 230 240 250 260 270
260 270 280
pF1KB8 ------------------QNFGLMIA-----------------DP-ICSILIAILIVVSV
. : .: :: .: ... ::. ..
CCDS14 KGCSEGDFCVNPCFPDPCKAFVEIINSTHASVYEAGPCWVLYLDPTLCVVMVCILLYTTY
280 290 300 310 320 330
290 300 310 320 330 340
pF1KB8 IPLLRESVGILMQRTPPLLENSLPQCYQRVQQLQGVYSLQEQHFWTLCSDVYVGTLKLIV
:::.::. ::.: .: .. . . .......:: ..: : : :
CCDS14 -PLLKESALILLQTVPKQID--IRNLIKELRNVEGVEEVHELHVWQLAGSRIIATAHIKC
340 350 360 370 380 390
350 360 370
pF1KB8 APDADARWILSQTHNIFTQAGVRQLYVQIDFAAM
CCDS14 EDPTSYMEVAKTIKDVFHNHGIHATTIQPEFASVGSKSSVVPCELACRTQCALKQCCGTL
400 410 420 430 440 450
>>CCDS31026.1 SLC30A10 gene_id:55532|Hs108|chr1 (485 aa)
initn: 372 init1: 123 opt: 285 Z-score: 334.3 bits: 70.9 E(32554): 2.7e-12
Smith-Waterman score: 459; 27.8% identity (60.1% similar) in 381 aa overlap (31-370:5-381)
10 20 30 40 50 60
pF1KB8 MLPLSIKDDEYKPPKFNLFGKISGWFRSILSDKTSRNLFFFLCLNLSFAFVELLYGIWSN
: :: : :.:.: :...: .::. : .:
CCDS31 MGRYSGKTCR-LLFMLVLTVAFFVAELVSGYLGN
10 20 30
70 80 90 100 110
pF1KB8 CLGLISDSFHMFFDSTAILAGLAASVISKWRDNDAFS--YGYVRAEVLAGFVNGLFLIFT
..:.::::.:. : .. .::.:. :.. : . .:: :::.::::.... :..::
CCDS31 SIALLSDSFNMLSDLISLCVGLSAGYIAR-RPTRGFSATYGYARAEVVGALSNAVFLTAL
40 50 60 70 80 90
120 130 140 150 160
pF1KB8 AFFIFSEGVERALAPPDVHHERL-LLVSILGFVVNLIGIFVFKHG---------GHGHSH
: :: :.: : : . .: :.:..::..::..:...:. :...
CCDS31 CFTIFVEAVLRLARPERIDDPELVLIVGVLGLLVNVVGLLIFQDCAAWFACCLRGRSRRL
100 110 120 130 140 150
170 180 190 200 210
pF1KB8 GSGHGHSHSLFNGALDQAHGHVDH----------CHSHEVKHGAAHSHDHAHGHGHFHSH
. . ... ::. .: : : . .:.. . . .: : .
CCDS31 QQRQQLAEGCVPGAFGGPQGAEDPRRAADPTAPGSDSAVTLRGTSVERKREKGATVFANV
160 170 180 190 200 210
220 230 240 250 260
pF1KB8 DGPSLKETTGPSRQI----------LQGVFLHILADTLGSIGVIASAIMMQNFGLMIADP
: :.. . : .. ..::.::...:.:::. :. .::.. . : ::
CCDS31 AGDSFNTQNEPEDMMKKEKKSEALNIRGVLLHVMGDALGSVVVVITAIIFYVLPLKSEDP
220 230 240 250 260 270
270 280 290 300 310
pF1KB8 I---C------SILIAILIVVSVIPLLRESVGILMQRTPPLLENSLPQCYQRVQQLQGVY
: ..:..:.:. :..::..:...::.: .: . .. . ..... . :.
CCDS31 CNWQCYIDPSLTVLMVIIILSSAFPLIKETAAILLQMVPKGV--NMEELMSKLSAVPGIS
280 290 300 310 320 330
320 330 340 350 360 370
pF1KB8 SLQEQHFWTLCSDVYVGTLKLIVAPDADARWILSQTHNIFTQAGVRQLYVQIDFAAM
:..: :.: : : ..::.. : . .. ..:: .::.... .:
CCDS31 SVHEVHIWELVSGKIIATLHIKYPKDRGYQDASTKIREIFHHAGIHNVTIQFENVDLKEP
340 350 360 370 380 390
CCDS31 LEQKDLLLLCNSPCISKGCAKQLCCPPGALPLAHVNGCAEHNGGPSLDTYGSDGLSRRDA
400 410 420 430 440 450
376 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 14:46:19 2016 done: Fri Nov 4 14:46:20 2016
Total Scan time: 2.710 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]