Result of FASTA (omim) for
pF1KB8732
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8732, 576 aa
1>>>pF1KB8732 576 - 576 aa - 576 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 12.9404+/-0.000439; mu= -16.1972+/- 0.027
mean_var=467.4216+/-95.963, 0's: 0 Z-trim(123.0): 185 B-trim: 0 in 0/58
Lambda= 0.059323
statistics sampled from 41836 (42045) to 41836 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.777), E-opt: 0.2 (0.493), width: 16
Scan time: 13.260
The best scores are: opt bits E(85289)
NP_001073899 (OMIM: 611416) TOX high mobility grou ( 576) 3798 339.6 1.7e-92
XP_005255949 (OMIM: 611416) PREDICTED: TOX high mo ( 575) 3779 338.0 5.2e-92
XP_016878631 (OMIM: 611416) PREDICTED: TOX high mo ( 572) 3603 322.9 1.8e-87
XP_011521304 (OMIM: 611416) PREDICTED: TOX high mo ( 553) 3592 321.9 3.3e-87
NP_001139660 (OMIM: 611416) TOX high mobility grou ( 571) 3584 321.3 5.4e-87
NP_055544 (OMIM: 606863) thymocyte selection-assoc ( 526) 1320 127.5 1.1e-28
XP_016869574 (OMIM: 606863) PREDICTED: thymocyte s ( 504) 1202 117.4 1.2e-25
NP_055643 (OMIM: 614032) TOX high mobility group b ( 621) 1169 114.6 9.6e-25
NP_001290452 (OMIM: 614032) TOX high mobility grou ( 598) 1132 111.4 8.4e-24
NP_001092266 (OMIM: 611163) TOX high mobility grou ( 464) 829 85.4 4.4e-16
NP_116272 (OMIM: 611163) TOX high mobility group b ( 464) 829 85.4 4.4e-16
NP_001092267 (OMIM: 611163) TOX high mobility grou ( 506) 829 85.4 4.7e-16
XP_006723947 (OMIM: 611163) PREDICTED: TOX high mo ( 515) 829 85.5 4.8e-16
NP_001092268 (OMIM: 611163) TOX high mobility grou ( 488) 658 70.8 1.2e-11
XP_016883598 (OMIM: 611163) PREDICTED: TOX high mo ( 305) 651 70.0 1.2e-11
XP_011528522 (OMIM: 607372) PREDICTED: mediator of ( 406) 376 46.6 0.00019
XP_011528521 (OMIM: 607372) PREDICTED: mediator of ( 406) 376 46.6 0.00019
XP_016884311 (OMIM: 607372) PREDICTED: mediator of ( 406) 376 46.6 0.00019
XP_011528520 (OMIM: 607372) PREDICTED: mediator of ( 411) 376 46.6 0.00019
NP_001166238 (OMIM: 602081,605317) forkhead box pr ( 457) 377 46.7 0.00019
NP_683697 (OMIM: 602081,605317) forkhead box prote ( 432) 374 46.5 0.00022
XP_016884310 (OMIM: 607372) PREDICTED: mediator of ( 520) 376 46.7 0.00023
NP_001166237 (OMIM: 602081,605317) forkhead box pr ( 714) 378 47.0 0.00026
XP_016884309 (OMIM: 607372) PREDICTED: mediator of ( 667) 376 46.8 0.00027
NP_001280165 (OMIM: 607372) mediator of RNA polyme ( 677) 376 46.8 0.00028
NP_683696 (OMIM: 602081,605317) forkhead box prote ( 740) 377 46.9 0.00028
XP_016868290 (OMIM: 602081,605317) PREDICTED: fork ( 740) 377 46.9 0.00028
XP_016884308 (OMIM: 607372) PREDICTED: mediator of ( 707) 376 46.8 0.00029
XP_016884307 (OMIM: 607372) PREDICTED: mediator of ( 707) 376 46.8 0.00029
XP_006724327 (OMIM: 607372) PREDICTED: mediator of ( 707) 376 46.8 0.00029
XP_006724326 (OMIM: 607372) PREDICTED: mediator of ( 717) 376 46.8 0.00029
NP_001280164 (OMIM: 607372) mediator of RNA polyme ( 722) 376 46.8 0.00029
NP_001280166 (OMIM: 607372) mediator of RNA polyme ( 722) 376 46.8 0.00029
NP_001280163 (OMIM: 607372) mediator of RNA polyme ( 731) 376 46.8 0.00029
XP_011528517 (OMIM: 607372) PREDICTED: mediator of ( 741) 376 46.8 0.0003
NP_056973 (OMIM: 607372) mediator of RNA polymeras ( 748) 376 46.8 0.0003
XP_016884306 (OMIM: 607372) PREDICTED: mediator of ( 749) 376 46.8 0.0003
XP_011528516 (OMIM: 607372) PREDICTED: mediator of ( 762) 376 46.8 0.0003
NP_001003891 (OMIM: 607372) mediator of RNA polyme ( 788) 376 46.8 0.00031
NP_055306 (OMIM: 602081,605317) forkhead box prote ( 715) 374 46.6 0.00032
XP_011541327 (OMIM: 607537) PREDICTED: mastermind- ( 735) 366 45.9 0.00053
NP_683698 (OMIM: 602081,605317) forkhead box prote ( 732) 364 45.8 0.0006
XP_011541326 (OMIM: 607537) PREDICTED: mastermind- ( 928) 366 46.0 0.00064
XP_011541325 (OMIM: 607537) PREDICTED: mastermind- (1009) 366 46.1 0.00068
NP_115803 (OMIM: 607537) mastermind-like protein 2 (1156) 366 46.1 0.00075
XP_011537078 (OMIM: 147920,602113) PREDICTED: hist (5525) 382 48.0 0.00097
XP_006719679 (OMIM: 147920,602113) PREDICTED: hist (5536) 382 48.0 0.00097
XP_005269219 (OMIM: 147920,602113) PREDICTED: hist (5537) 382 48.0 0.00097
NP_003473 (OMIM: 147920,602113) histone-lysine N-m (5537) 382 48.0 0.00097
XP_006719677 (OMIM: 147920,602113) PREDICTED: hist (5540) 382 48.0 0.00097
>>NP_001073899 (OMIM: 611416) TOX high mobility group bo (576 aa)
initn: 3798 init1: 3798 opt: 3798 Z-score: 1781.7 bits: 339.6 E(85289): 1.7e-92
Smith-Waterman score: 3798; 100.0% identity (100.0% similar) in 576 aa overlap (1-576:1-576)
10 20 30 40 50 60
pF1KB8 MDVRFYPAAAGDPASLDFAQCLGYYGYSKFGNNNNYMNMAEANNAFFAASEQTFHTPSLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDVRFYPAAAGDPASLDFAQCLGYYGYSKFGNNNNYMNMAEANNAFFAASEQTFHTPSLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 DEEFEIPPITPPPESDPALGMPDVLLPFQALSDPLPSQGSEFTPQFPPQSLDLPSITISR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DEEFEIPPITPPPESDPALGMPDVLLPFQALSDPLPSQGSEFTPQFPPQSLDLPSITISR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 NLVEQDGVLHSSGLHMDQSHTQVSQYRQDPSLIMRSIVHMTDAARSGVMPPAQLTTINQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLVEQDGVLHSSGLHMDQSHTQVSQYRQDPSLIMRSIVHMTDAARSGVMPPAQLTTINQS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 QLSAQLGLNLGGASMPHTSPSPPASKSATPSPSSSINEEDADEANRAIGEKRAAPDSGKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLSAQLGLNLGGASMPHTSPSPPASKSATPSPSSSINEEDADEANRAIGEKRAAPDSGKK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 PKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 KQVYKRKTEAAKKEYLKALAAYRASLVSKAAAESAEAQTIRSVQQTLASTNLTSSLLLNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KQVYKRKTEAAKKEYLKALAAYRASLVSKAAAESAEAQTIRSVQQTLASTNLTSSLLLNT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 PLSQHGTVSASPQTLQQSLPRSIAPKPLTMRLPMNQIVTSVTIAANMPSNIGAPLISSMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLSQHGTVSASPQTLQQSLPRSIAPKPLTMRLPMNQIVTSVTIAANMPSNIGAPLISSMG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 TTMVGSAPSTQVSPSVQTQQHQMQLQQQQQQQQQQMQQMQQQQLQQHQMHQQIQQQMQQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTMVGSAPSTQVSPSVQTQQHQMQLQQQQQQQQQQMQQMQQQQLQQHQMHQQIQQQMQQQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 HFQHHMQQHLQQQQQHLQQQINQQQLQQQLQQRLQLQQLQHMQHQSQPSPRQHSPVASQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HFQHHMQQHLQQQQQHLQQQINQQQLQQQLQQRLQLQQLQHMQHQSQPSPRQHSPVASQI
490 500 510 520 530 540
550 560 570
pF1KB8 TSPIPAIGSPQPASQQHQSQIQSQTQTQVLSQVSIF
::::::::::::::::::::::::::::::::::::
NP_001 TSPIPAIGSPQPASQQHQSQIQSQTQTQVLSQVSIF
550 560 570
>>XP_005255949 (OMIM: 611416) PREDICTED: TOX high mobili (575 aa)
initn: 3466 init1: 3466 opt: 3779 Z-score: 1772.9 bits: 338.0 E(85289): 5.2e-92
Smith-Waterman score: 3779; 99.8% identity (99.8% similar) in 576 aa overlap (1-576:1-575)
10 20 30 40 50 60
pF1KB8 MDVRFYPAAAGDPASLDFAQCLGYYGYSKFGNNNNYMNMAEANNAFFAASEQTFHTPSLG
::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::
XP_005 MDVRFYPAAAGDPASLDFAQCLGYYGYSKFGNNNNYMNMAEANNAFFAASE-TFHTPSLG
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 DEEFEIPPITPPPESDPALGMPDVLLPFQALSDPLPSQGSEFTPQFPPQSLDLPSITISR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DEEFEIPPITPPPESDPALGMPDVLLPFQALSDPLPSQGSEFTPQFPPQSLDLPSITISR
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB8 NLVEQDGVLHSSGLHMDQSHTQVSQYRQDPSLIMRSIVHMTDAARSGVMPPAQLTTINQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NLVEQDGVLHSSGLHMDQSHTQVSQYRQDPSLIMRSIVHMTDAARSGVMPPAQLTTINQS
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB8 QLSAQLGLNLGGASMPHTSPSPPASKSATPSPSSSINEEDADEANRAIGEKRAAPDSGKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QLSAQLGLNLGGASMPHTSPSPPASKSATPSPSSSINEEDADEANRAIGEKRAAPDSGKK
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB8 PKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQ
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB8 KQVYKRKTEAAKKEYLKALAAYRASLVSKAAAESAEAQTIRSVQQTLASTNLTSSLLLNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KQVYKRKTEAAKKEYLKALAAYRASLVSKAAAESAEAQTIRSVQQTLASTNLTSSLLLNT
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB8 PLSQHGTVSASPQTLQQSLPRSIAPKPLTMRLPMNQIVTSVTIAANMPSNIGAPLISSMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PLSQHGTVSASPQTLQQSLPRSIAPKPLTMRLPMNQIVTSVTIAANMPSNIGAPLISSMG
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB8 TTMVGSAPSTQVSPSVQTQQHQMQLQQQQQQQQQQMQQMQQQQLQQHQMHQQIQQQMQQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TTMVGSAPSTQVSPSVQTQQHQMQLQQQQQQQQQQMQQMQQQQLQQHQMHQQIQQQMQQQ
420 430 440 450 460 470
490 500 510 520 530 540
pF1KB8 HFQHHMQQHLQQQQQHLQQQINQQQLQQQLQQRLQLQQLQHMQHQSQPSPRQHSPVASQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HFQHHMQQHLQQQQQHLQQQINQQQLQQQLQQRLQLQQLQHMQHQSQPSPRQHSPVASQI
480 490 500 510 520 530
550 560 570
pF1KB8 TSPIPAIGSPQPASQQHQSQIQSQTQTQVLSQVSIF
::::::::::::::::::::::::::::::::::::
XP_005 TSPIPAIGSPQPASQQHQSQIQSQTQTQVLSQVSIF
540 550 560 570
>>XP_016878631 (OMIM: 611416) PREDICTED: TOX high mobili (572 aa)
initn: 3603 init1: 3603 opt: 3603 Z-score: 1691.5 bits: 322.9 E(85289): 1.8e-87
Smith-Waterman score: 3603; 99.8% identity (99.8% similar) in 550 aa overlap (27-576:23-572)
10 20 30 40 50 60
pF1KB8 MDVRFYPAAAGDPASLDFAQCLGYYGYSKFGNNNNYMNMAEANNAFFAASEQTFHTPSLG
: ::::::::::::::::::::::::::::::::
XP_016 MKCQPRSGARRIEERLHYLITTYLKFGNNNNYMNMAEANNAFFAASEQTFHTPSLG
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 DEEFEIPPITPPPESDPALGMPDVLLPFQALSDPLPSQGSEFTPQFPPQSLDLPSITISR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DEEFEIPPITPPPESDPALGMPDVLLPFQALSDPLPSQGSEFTPQFPPQSLDLPSITISR
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB8 NLVEQDGVLHSSGLHMDQSHTQVSQYRQDPSLIMRSIVHMTDAARSGVMPPAQLTTINQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NLVEQDGVLHSSGLHMDQSHTQVSQYRQDPSLIMRSIVHMTDAARSGVMPPAQLTTINQS
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB8 QLSAQLGLNLGGASMPHTSPSPPASKSATPSPSSSINEEDADEANRAIGEKRAAPDSGKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QLSAQLGLNLGGASMPHTSPSPPASKSATPSPSSSINEEDADEANRAIGEKRAAPDSGKK
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB8 PKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQ
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB8 KQVYKRKTEAAKKEYLKALAAYRASLVSKAAAESAEAQTIRSVQQTLASTNLTSSLLLNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KQVYKRKTEAAKKEYLKALAAYRASLVSKAAAESAEAQTIRSVQQTLASTNLTSSLLLNT
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB8 PLSQHGTVSASPQTLQQSLPRSIAPKPLTMRLPMNQIVTSVTIAANMPSNIGAPLISSMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PLSQHGTVSASPQTLQQSLPRSIAPKPLTMRLPMNQIVTSVTIAANMPSNIGAPLISSMG
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB8 TTMVGSAPSTQVSPSVQTQQHQMQLQQQQQQQQQQMQQMQQQQLQQHQMHQQIQQQMQQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TTMVGSAPSTQVSPSVQTQQHQMQLQQQQQQQQQQMQQMQQQQLQQHQMHQQIQQQMQQQ
420 430 440 450 460 470
490 500 510 520 530 540
pF1KB8 HFQHHMQQHLQQQQQHLQQQINQQQLQQQLQQRLQLQQLQHMQHQSQPSPRQHSPVASQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HFQHHMQQHLQQQQQHLQQQINQQQLQQQLQQRLQLQQLQHMQHQSQPSPRQHSPVASQI
480 490 500 510 520 530
550 560 570
pF1KB8 TSPIPAIGSPQPASQQHQSQIQSQTQTQVLSQVSIF
::::::::::::::::::::::::::::::::::::
XP_016 TSPIPAIGSPQPASQQHQSQIQSQTQTQVLSQVSIF
540 550 560 570
>>XP_011521304 (OMIM: 611416) PREDICTED: TOX high mobili (553 aa)
initn: 3592 init1: 3592 opt: 3592 Z-score: 1686.6 bits: 321.9 E(85289): 3.3e-87
Smith-Waterman score: 3592; 100.0% identity (100.0% similar) in 547 aa overlap (30-576:7-553)
10 20 30 40 50 60
pF1KB8 MDVRFYPAAAGDPASLDFAQCLGYYGYSKFGNNNNYMNMAEANNAFFAASEQTFHTPSLG
:::::::::::::::::::::::::::::::
XP_011 MAQFICFGNNNNYMNMAEANNAFFAASEQTFHTPSLG
10 20 30
70 80 90 100 110 120
pF1KB8 DEEFEIPPITPPPESDPALGMPDVLLPFQALSDPLPSQGSEFTPQFPPQSLDLPSITISR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DEEFEIPPITPPPESDPALGMPDVLLPFQALSDPLPSQGSEFTPQFPPQSLDLPSITISR
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB8 NLVEQDGVLHSSGLHMDQSHTQVSQYRQDPSLIMRSIVHMTDAARSGVMPPAQLTTINQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NLVEQDGVLHSSGLHMDQSHTQVSQYRQDPSLIMRSIVHMTDAARSGVMPPAQLTTINQS
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB8 QLSAQLGLNLGGASMPHTSPSPPASKSATPSPSSSINEEDADEANRAIGEKRAAPDSGKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QLSAQLGLNLGGASMPHTSPSPPASKSATPSPSSSINEEDADEANRAIGEKRAAPDSGKK
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB8 PKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQ
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB8 KQVYKRKTEAAKKEYLKALAAYRASLVSKAAAESAEAQTIRSVQQTLASTNLTSSLLLNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KQVYKRKTEAAKKEYLKALAAYRASLVSKAAAESAEAQTIRSVQQTLASTNLTSSLLLNT
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB8 PLSQHGTVSASPQTLQQSLPRSIAPKPLTMRLPMNQIVTSVTIAANMPSNIGAPLISSMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PLSQHGTVSASPQTLQQSLPRSIAPKPLTMRLPMNQIVTSVTIAANMPSNIGAPLISSMG
340 350 360 370 380 390
430 440 450 460 470 480
pF1KB8 TTMVGSAPSTQVSPSVQTQQHQMQLQQQQQQQQQQMQQMQQQQLQQHQMHQQIQQQMQQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TTMVGSAPSTQVSPSVQTQQHQMQLQQQQQQQQQQMQQMQQQQLQQHQMHQQIQQQMQQQ
400 410 420 430 440 450
490 500 510 520 530 540
pF1KB8 HFQHHMQQHLQQQQQHLQQQINQQQLQQQLQQRLQLQQLQHMQHQSQPSPRQHSPVASQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HFQHHMQQHLQQQQQHLQQQINQQQLQQQLQQRLQLQQLQHMQHQSQPSPRQHSPVASQI
460 470 480 490 500 510
550 560 570
pF1KB8 TSPIPAIGSPQPASQQHQSQIQSQTQTQVLSQVSIF
::::::::::::::::::::::::::::::::::::
XP_011 TSPIPAIGSPQPASQQHQSQIQSQTQTQVLSQVSIF
520 530 540 550
>>NP_001139660 (OMIM: 611416) TOX high mobility group bo (571 aa)
initn: 3466 init1: 3466 opt: 3584 Z-score: 1682.7 bits: 321.3 E(85289): 5.4e-87
Smith-Waterman score: 3584; 99.6% identity (99.6% similar) in 550 aa overlap (27-576:23-571)
10 20 30 40 50 60
pF1KB8 MDVRFYPAAAGDPASLDFAQCLGYYGYSKFGNNNNYMNMAEANNAFFAASEQTFHTPSLG
: ::::::::::::::::::::::: ::::::::
NP_001 MKCQPRSGARRIEERLHYLITTYLKFGNNNNYMNMAEANNAFFAASE-TFHTPSLG
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 DEEFEIPPITPPPESDPALGMPDVLLPFQALSDPLPSQGSEFTPQFPPQSLDLPSITISR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DEEFEIPPITPPPESDPALGMPDVLLPFQALSDPLPSQGSEFTPQFPPQSLDLPSITISR
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB8 NLVEQDGVLHSSGLHMDQSHTQVSQYRQDPSLIMRSIVHMTDAARSGVMPPAQLTTINQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLVEQDGVLHSSGLHMDQSHTQVSQYRQDPSLIMRSIVHMTDAARSGVMPPAQLTTINQS
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB8 QLSAQLGLNLGGASMPHTSPSPPASKSATPSPSSSINEEDADEANRAIGEKRAAPDSGKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLSAQLGLNLGGASMPHTSPSPPASKSATPSPSSSINEEDADEANRAIGEKRAAPDSGKK
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB8 PKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQ
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB8 KQVYKRKTEAAKKEYLKALAAYRASLVSKAAAESAEAQTIRSVQQTLASTNLTSSLLLNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KQVYKRKTEAAKKEYLKALAAYRASLVSKAAAESAEAQTIRSVQQTLASTNLTSSLLLNT
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB8 PLSQHGTVSASPQTLQQSLPRSIAPKPLTMRLPMNQIVTSVTIAANMPSNIGAPLISSMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLSQHGTVSASPQTLQQSLPRSIAPKPLTMRLPMNQIVTSVTIAANMPSNIGAPLISSMG
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB8 TTMVGSAPSTQVSPSVQTQQHQMQLQQQQQQQQQQMQQMQQQQLQQHQMHQQIQQQMQQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTMVGSAPSTQVSPSVQTQQHQMQLQQQQQQQQQQMQQMQQQQLQQHQMHQQIQQQMQQQ
420 430 440 450 460 470
490 500 510 520 530 540
pF1KB8 HFQHHMQQHLQQQQQHLQQQINQQQLQQQLQQRLQLQQLQHMQHQSQPSPRQHSPVASQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HFQHHMQQHLQQQQQHLQQQINQQQLQQQLQQRLQLQQLQHMQHQSQPSPRQHSPVASQI
480 490 500 510 520 530
550 560 570
pF1KB8 TSPIPAIGSPQPASQQHQSQIQSQTQTQVLSQVSIF
::::::::::::::::::::::::::::::::::::
NP_001 TSPIPAIGSPQPASQQHQSQIQSQTQTQVLSQVSIF
540 550 560 570
>>NP_055544 (OMIM: 606863) thymocyte selection-associate (526 aa)
initn: 924 init1: 641 opt: 1320 Z-score: 636.1 bits: 127.5 E(85289): 1.1e-28
Smith-Waterman score: 1328; 49.2% identity (69.6% similar) in 494 aa overlap (1-476:1-464)
10 20 30 40 50
pF1KB8 MDVRFYP-----AAAGDPASLDFAQCLGYYGYSKFGNNNNYMNMAEANNAFFAASEQTFH
::::::: ::: : : . :: : .:: ..: ::.:.: .. . :: :..
NP_055 MDVRFYPPPAQPAAAPDAPCLGPSPCLDPYYCNKFDGENMYMSMTEPSQDYVPAS-QSYP
10 20 30 40 50
60 70 80 90 100 110
pF1KB8 TPSLGDEEFEIPPITPPPESDPAL-GMPDVLLPFQALSDPLPSQGSEFTPQFPPQSLDLP
::: .:.:.::::::: : .: . .: ...: :. .: . : : ::..:::
NP_055 GPSLESEDFNIPPITPPSLPDHSLVHLNEVESGYHSLCHPMNHNG--LLP-FHPQNMDLP
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB8 SITISRNLVEQDGVLHSSGLHM--DQSHTQVSQYRQDPSLI-MRSIVHMTDAARS-GVMP
::.: :.. :::.: :... . : . . .:: . :.. :: . .: .. :.::
NP_055 EITVS-NMLGQDGTLLSNSISVMPDIRNPEGTQYSSHPQMAAMRPRGQPADIRQQPGMMP
120 130 140 150 160 170
180 190 200 210 220
pF1KB8 PAQLTTINQSQLSAQLGLNLGGASMPHTSPSPPASKSATPSPSSSINEEDADEANRAIG-
.:::::::::::::::::.::...::.:::::.:::::::::::..:...:.... :
NP_055 HGQLTTINQSQLSAQLGLNMGGSNVPHNSPSPPGSKSATPSPSSSVHEDEGDDTSKINGG
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB8 EKRAAPDSGKKPKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIV
::: : : ::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 EKRPASDMGKKPKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIV
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB8 ASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYRASLVSKAAAESAEAQTIRSVQQTLAS
:::::.::::::::::.::::::::::: :::::::::::. .: ....: . : ..
NP_055 ASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRASLVSKSYSEPVDVKTSQPPQLINSK
300 310 320 330 340 350
350 360 370 380 390 400
pF1KB8 TNLT-------SSLLLNTPLSQHGTVSASPQTLQQSLPRSIAPKPLTMRLPMNQIVTSVT
.. :.: :.. :. .. ... ::::.::::: ::. ..:.
NP_055 PSVFHGPSQAHSALYLSSHYHQQPGMNPHLTAMHPSLPRNIAPKP------NNQMPVTVS
360 370 380 390 400
410 420 430 440 450 460
pF1KB8 IAANMPSNIGAPLISSMGTTMVGSAPSTQVSPSVQTQQHQMQLQQQQQQQQQQMQQMQQQ
:: :: .. : : :.:: . .:: ...::.: .:: :
NP_055 IA-NM--AVSPP-------------PPLQISPPL--HQH-LNMQQHQPLTMQQPLGNQLP
410 420 430 440 450
470 480 490 500 510 520
pF1KB8 QLQQHQMHQQIQQQMQQQHFQHHMQQHLQQQQQHLQQQINQQQLQQQLQQRLQLQQLQHM
. : .:. .::
NP_055 MQVQSALHSPTMQQGFTLQPDYQTIINPTSTAAQVVTQAMEYVRSGCRNPPPQPVDWNND
460 470 480 490 500 510
>>XP_016869574 (OMIM: 606863) PREDICTED: thymocyte selec (504 aa)
initn: 916 init1: 641 opt: 1202 Z-score: 581.7 bits: 117.4 E(85289): 1.2e-25
Smith-Waterman score: 1238; 47.4% identity (67.9% similar) in 489 aa overlap (1-476:1-442)
10 20 30 40 50 60
pF1KB8 MDVRFYPAAAGDPASLDFAQCLGYYGYSKFGNNNNYMNMAEANNAFFAASEQTFHTPSLG
::::::: : .::. : ::: . . .. .... :::
XP_016 MDVRFYPPPA-QPAAAPDAPCLGP---------------SPCLDPYY--CNKSYPGPSLE
10 20 30 40
70 80 90 100 110
pF1KB8 DEEFEIPPITPPPESDPAL-GMPDVLLPFQALSDPLPSQGSEFTPQFPPQSLDLPSITIS
.:.:.::::::: : .: . .: ...: :. .: . : : ::..::: ::.:
XP_016 SEDFNIPPITPPSLPDHSLVHLNEVESGYHSLCHPMNHNG--LLP-FHPQNMDLPEITVS
50 60 70 80 90
120 130 140 150 160 170
pF1KB8 RNLVEQDGVLHSSGLHM--DQSHTQVSQYRQDPSLI-MRSIVHMTDAARS-GVMPPAQLT
:.. :::.: :... . : . . .:: . :.. :: . .: .. :.:: .:::
XP_016 -NMLGQDGTLLSNSISVMPDIRNPEGTQYSSHPQMAAMRPRGQPADIRQQPGMMPHGQLT
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB8 TINQSQLSAQLGLNLGGASMPHTSPSPPASKSATPSPSSSINEEDADEANRAIG-EKRAA
::::::::::::::.::...::.:::::.:::::::::::..:...:.... : ::: :
XP_016 TINQSQLSAQLGLNMGGSNVPHNSPSPPGSKSATPSPSSSVHEDEGDDTSKINGGEKRPA
160 170 180 190 200 210
240 250 260 270 280 290
pF1KB8 PDSGKKPKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWD
: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SDMGKKPKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWD
220 230 240 250 260 270
300 310 320 330 340 350
pF1KB8 SLGEEQKQVYKRKTEAAKKEYLKALAAYRASLVSKAAAESAEAQTIRSVQQTLASTNLT-
.::::::::::.::::::::::: :::::::::::. .: ....: . : .. ..
XP_016 GLGEEQKQVYKKKTEAAKKEYLKQLAAYRASLVSKSYSEPVDVKTSQPPQLINSKPSVFH
280 290 300 310 320 330
360 370 380 390 400
pF1KB8 ------SSLLLNTPLSQHGTVSASPQTLQQSLPRSIAPKPLTMRLPMNQIVTSVTIAANM
:.: :.. :. .. ... ::::.::::: ::. ..:.:: ::
XP_016 GPSQAHSALYLSSHYHQQPGMNPHLTAMHPSLPRNIAPKP------NNQMPVTVSIA-NM
340 350 360 370 380 390
410 420 430 440 450 460
pF1KB8 PSNIGAPLISSMGTTMVGSAPSTQVSPSVQTQQHQMQLQQQQQQQQQQMQQMQQQQLQQH
.. : : :.:: . .:: ...::.: .:: : . :
XP_016 --AVSPP-------------PPLQISPPL--HQH-LNMQQHQPLTMQQPLGNQLPMQVQS
400 410 420 430
470 480 490 500 510 520
pF1KB8 QMHQQIQQQMQQQHFQHHMQQHLQQQQQHLQQQINQQQLQQQLQQRLQLQQLQHMQHQSQ
.:. .::
XP_016 ALHSPTMQQGFTLQPDYQTIINPTSTAAQVVTQAMEYVRSGCRNPPPQPVDWNNDYCSSG
440 450 460 470 480 490
>>NP_055643 (OMIM: 614032) TOX high mobility group box f (621 aa)
initn: 872 init1: 566 opt: 1169 Z-score: 565.2 bits: 114.6 E(85289): 9.6e-25
Smith-Waterman score: 1196; 42.6% identity (66.8% similar) in 549 aa overlap (31-554:5-536)
10 20 30 40 50 60
pF1KB8 MDVRFYPAAAGDPASLDFAQCLGYYGYSKFGNNNNYMNMAEANNAFFAASEQTFHTPSLG
:.:.::.... .. :....: ::::::::
NP_055 MEFPGGNDNYLTITGPSHPFLSGAE-TFHTPSLG
10 20 30
70 80 90 100 110 120
pF1KB8 DEEFEIPPITPPPESDPALGMPDVLLPFQALSDPLPSQGSEFTPQFPPQSLDLPSITISR
:::::::::. .:::.:.. ::. :. :.:: :: . :. :. :.::.: . ...
NP_055 DEEFEIPPIS--LDSDPSLAVSDVVGHFDDLADPSSSQDGSFSAQYGVQTLDMP-VGMTH
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB8 NLVEQDGVLHSSGLHMDQSHTQVSQYRQDPSLIMRSIVHMTDAARSGVMPPAQLTTINQS
.:.:: : : :.:: :: .:. .:: .: . . : ::: . ::.: .:::::.::
NP_055 GLMEQGGGLLSGGLTMDLDHSIGTQYSANPPVTID--VPMTDMT-SGLMGHSQLTTIDQS
100 110 120 130 140
190 200 210 220 230
pF1KB8 QLSAQLGLNLGGASMPHTSPSPPASKSATPSPSSSINEEDADEANRAI-GEKRAAPDSGK
.::.::::.:::... . :: :.::::.::..:. ... : . ..: .. ..::
NP_055 ELSSQLGLSLGGGTILPPAQSPEDRLSTTPSPTSSLHEDGVEDFRRQLPSQKTVVVEAGK
150 160 170 180 190 200
240 250 260 270 280 290
pF1KB8 KPKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEE
: :.:::.::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 KQKAPKKRKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEE
210 220 230 240 250 260
300 310 320 330 340
pF1KB8 QKQVYKRKTEAAKKEYLKALAAYRASLVSKAAAESAE------AQT-----IRSVQQ---
:::::::::::::::::::::::. . .:..:..: .:: . .:.
NP_055 QKQVYKRKTEAAKKEYLKALAAYKDNQECQATVETVELDPAPPSQTPSPPPMATVDPASP
270 280 290 300 310 320
350 360 370 380 390 400
pF1KB8 ---TLASTNLTSSLLLNTPLSQHGTVSASPQTL-QQSLPRSIAPKPLTMRLPMNQIVTSV
.. :. :...:. ::.. . .:: . : .. . : : . :: .:.
NP_055 APASIEPPALSPSIVVNSTLSSYVANQASSGAGGQPNITKLIITKQM---LP-----SSI
330 340 350 360 370
410 420 430 440 450
pF1KB8 TIA-ANMPSNIGAPLISSMGTTMVGSAPSTQVSPSVQTQQ-HQMQLQQQQQQQQQQMQQM
:.. ..: . : : ...: : . :.. .. ..:: :.: . :: .:.
NP_055 TMSQGGMVTVIPATVVTSRGLQL-GQTSTATIQPSQQAQIVTRSVLQAAAAAAAAASMQL
380 390 400 410 420 430
460 470 480 490 500 510
pF1KB8 QQQQLQQHQMHQQIQQQMQQQHFQHHMQQHLQQQQQHLQQQ--INQQQLQQQLQ-QRLQL
.:: ..:. : ::: .. :: .:: :. :: :: :: . . :
NP_055 PPPRLQPPPLQQMPQPPTQQQVTILQQPPPLQAMQQPPPQKVRINLQQQPPPLQIKSVPL
440 450 460 470 480 490
520 530 540 550 560 570
pF1KB8 QQLQHMQHQSQPSPRQHSPVASQITSP-IPAIGSPQPASQQHQSQIQSQTQTQVLSQVSI
:. :: : . :: . .:: .. .:.: .
NP_055 PTLK-MQTTLVPPTVESSPERPMNNSPEAHTVEAPSPETICEMITDVVPEVESPSQMDVE
500 510 520 530 540 550
pF1KB8 F
NP_055 LVSGSPVALSPQPRCVRSGCENPPIVSKDWDNEYCSNECVVKHCRDVFLAWVASRNSNTV
560 570 580 590 600 610
>>NP_001290452 (OMIM: 614032) TOX high mobility group bo (598 aa)
initn: 866 init1: 566 opt: 1132 Z-score: 548.3 bits: 111.4 E(85289): 8.4e-24
Smith-Waterman score: 1159; 43.2% identity (66.3% similar) in 528 aa overlap (52-554:2-513)
30 40 50 60 70 80
pF1KB8 LGYYGYSKFGNNNNYMNMAEANNAFFAASEQTFHTPSLGDEEFEIPPITPPPESDPALGM
.:::::::::::::::::. .:::.:..
NP_001 METFHTPSLGDEEFEIPPIS--LDSDPSLAV
10 20
90 100 110 120 130 140
pF1KB8 PDVLLPFQALSDPLPSQGSEFTPQFPPQSLDLPSITISRNLVEQDGVLHSSGLHMDQSHT
::. :. :.:: :: . :. :. :.::.: . ....:.:: : : :.:: :: .:.
NP_001 SDVVGHFDDLADPSSSQDGSFSAQYGVQTLDMP-VGMTHGLMEQGGGLLSGGLTMDLDHS
30 40 50 60 70 80
150 160 170 180 190 200
pF1KB8 QVSQYRQDPSLIMRSIVHMTDAARSGVMPPAQLTTINQSQLSAQLGLNLGGASMPHTSPS
.:: .: . . : ::: . ::.: .:::::.::.::.::::.:::... . :
NP_001 IGTQYSANPPVTID--VPMTDMT-SGLMGHSQLTTIDQSELSSQLGLSLGGGTILPPAQS
90 100 110 120 130 140
210 220 230 240 250 260
pF1KB8 PPASKSATPSPSSSINEEDADEANRAI-GEKRAAPDSGKKPKTPKKKKKKDPNEPQKPVS
: :.::::.::..:. ... : . ..: .. ..::: :.:::.:::::::::::::
NP_001 PEDRLSTTPSPTSSLHEDGVEDFRRQLPSQKTVVVEAGKKQKAPKKRKKKDPNEPQKPVS
150 160 170 180 190 200
270 280 290 300 310 320
pF1KB8 AYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA
210 220 230 240 250 260
330 340 350 360
pF1KB8 AYRASLVSKAAAESAE------AQT-----IRSVQQ------TLASTNLTSSLLLNTPLS
::. . .:..:..: .:: . .:. .. :. :...:. ::
NP_001 AYKDNQECQATVETVELDPAPPSQTPSPPPMATVDPASPAPASIEPPALSPSIVVNSTLS
270 280 290 300 310 320
370 380 390 400 410 420
pF1KB8 QHGTVSASPQTL-QQSLPRSIAPKPLTMRLPMNQIVTSVTIA-ANMPSNIGAPLISSMGT
.. . .:: . : .. . : : . :: .:.:.. ..: . : : ...: :
NP_001 SYVANQASSGAGGQPNITKLIITKQM---LP-----SSITMSQGGMVTVIPATVVTSRGL
330 340 350 360 370
430 440 450 460 470 480
pF1KB8 TMVGSAPSTQVSPSVQTQQ-HQMQLQQQQQQQQQQMQQMQQQQLQQHQMHQQIQQQMQQQ
. :.. .. ..:: :.: . :: .:. .:: ..:. : :::
NP_001 QL-GQTSTATIQPSQQAQIVTRSVLQAAAAAAAAASMQLPPPRLQPPPLQQMPQPPTQQQ
380 390 400 410 420 430
490 500 510 520 530
pF1KB8 HFQHHMQQHLQQQQQHLQQQ--INQQQLQQQLQ-QRLQLQQLQHMQHQSQPSPRQHSPVA
.. :: .:: :. :: :: :: . . : :. :: : . ::
NP_001 VTILQQPPPLQAMQQPPPQKVRINLQQQPPPLQIKSVPLPTLK-MQTTLVPPTVESSPER
440 450 460 470 480 490
540 550 560 570
pF1KB8 SQITSP-IPAIGSPQPASQQHQSQIQSQTQTQVLSQVSIF
. .:: .. .:.: .
NP_001 PMNNSPEAHTVEAPSPETICEMITDVVPEVESPSQMDVELVSGSPVALSPQPRCVRSGCE
500 510 520 530 540 550
>>NP_001092266 (OMIM: 611163) TOX high mobility group bo (464 aa)
initn: 817 init1: 738 opt: 829 Z-score: 409.7 bits: 85.4 E(85289): 4.4e-16
Smith-Waterman score: 959; 43.3% identity (66.7% similar) in 432 aa overlap (39-453:1-410)
10 20 30 40 50 60
pF1KB8 AAGDPASLDFAQCLGYYGYSKFGNNNNYMNMAEANNAFFAASEQTFHTPSLGDEEFEIPP
:...: ....: ::.. : ..:..::::
NP_001 MSDGNPELLSTS-QTYNGQSENNEDYEIPP
10 20
70 80 90 100 110 120
pF1KB8 ITPPPESDPAL-GMPDVLLPFQALSDPLPSQGSEFTPQFPPQSLDLPSITISRNLVEQDG
:::: .:.: . : ...: : .: . : . :..:::.: .: :.. ::.
NP_001 ITPPNLPEPSLLHLGDHEASYHSLCHGLTPNG--LLPAYSYQAMDLPAIMVS-NMLAQDS
30 40 50 60 70 80
130 140 150 160 170 180
pF1KB8 VLHSSGLHMDQS--HTQVSQY---RQDPSLIMRSIVHMTDAARSGVMPPAQLTTINQSQL
: :. : : :..:. : : : :. : .: .......::::
NP_001 HLLSGQLPTIQEMVHSEVAAYDSGRPGP-LLGRP-----------AMLASHMSALSQSQL
90 100 110 120 130
190 200 210 220 230 240
pF1KB8 SAQLGLNLGGASMPHTSPSPPASKSATPSPSSSINEEDADEANRAIGEKRAAPDSGKKPK
.:.:. .:. :.:::::.::::::::::: .::... . :::: . : ::: :
NP_001 ISQMGIR---SSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAK
140 150 160 170 180 190
250 260 270 280 290 300
pF1KB8 TPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQ
.:::::::::::::::::::::::::::::::::::.::::.::::::::::::::::::
NP_001 NPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQ
200 210 220 230 240 250
310 320 330 340 350
pF1KB8 VYKRKTEAAKKEYLKALAAYRASLVSKAAAESAEAQTIRSV--------QQTLASTNLTS
.::::::::::::::::::::::::::.. ...:... .. .: . . .
NP_001 AYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLA
260 270 280 290 300 310
360 370 380 390 400 410
pF1KB8 SLLLNTPLSQHGTVSASPQTLQQSL-PRSIAPKPLTMRLPMNQIVTSVTIAA--NMPSNI
:.: . : : .::: .: ..: .:. : . : .. : :. ..: .
NP_001 SFLTPSDL-QAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTLHQQLSLPPHA
320 330 340 350 360 370
420 430 440 450 460 470
pF1KB8 GAPLISSMGTTMVGSAPSTQVSPSVQTQQHQMQLQQQQQQQQQQMQQMQQQQLQQHQMHQ
. :.: . .. ::. : :. .. : :. .. . :
NP_001 QGALLSP--PVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPSSSGSCSPG
380 390 400 410 420
480 490 500 510 520 530
pF1KB8 QIQQQMQQQHFQHHMQQHLQQQQQHLQQQINQQQLQQQLQQRLQLQQLQHMQHQSQPSPR
NP_001 PSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT
430 440 450 460
576 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 15:02:58 2016 done: Fri Nov 4 15:03:00 2016
Total Scan time: 13.260 Total Display time: 0.100
Function used was FASTA [36.3.4 Apr, 2011]