FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB8738, 111 aa 1>>>pF1KB8738 111 - 111 aa - 111 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.8621+/-0.000532; mu= 13.6001+/- 0.032 mean_var=65.5988+/-13.051, 0's: 0 Z-trim(114.2): 10 B-trim: 0 in 0/51 Lambda= 0.158353 statistics sampled from 14794 (14804) to 14794 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.818), E-opt: 0.2 (0.455), width: 16 Scan time: 1.590 The best scores are: opt bits E(32554) CCDS14508.1 BEX3 gene_id:27018|Hs108|chrX ( 111) 798 189.5 3.5e-49 CCDS14509.1 BEX3 gene_id:27018|Hs108|chrX ( 101) 732 174.4 1.1e-44 CCDS35350.1 BEX5 gene_id:340542|Hs108|chrX ( 111) 406 100.0 3.2e-22 CCDS35355.1 BEX4 gene_id:56271|Hs108|chrX ( 120) 371 92.0 8.7e-20 CCDS35354.1 BEX1 gene_id:55859|Hs108|chrX ( 125) 263 67.3 2.4e-12 >>CCDS14508.1 BEX3 gene_id:27018|Hs108|chrX (111 aa) initn: 798 init1: 798 opt: 798 Z-score: 996.4 bits: 189.5 E(32554): 3.5e-49 Smith-Waterman score: 798; 100.0% identity (100.0% similar) in 111 aa overlap (1-111:1-111) 10 20 30 40 50 60 pF1KB8 MANIHQENEEMEQPMQNGEEDRPLGGGEGHQPAGNRRGQARRLAPNFRWAIPNRQINDGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 MANIHQENEEMEQPMQNGEEDRPLGGGEGHQPAGNRRGQARRLAPNFRWAIPNRQINDGM 10 20 30 40 50 60 70 80 90 100 110 pF1KB8 GGDGDDMEIFMEEMREIRRKLRELQLRNCLRILMGELSNHHDHHDEFCLMP ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 GGDGDDMEIFMEEMREIRRKLRELQLRNCLRILMGELSNHHDHHDEFCLMP 70 80 90 100 110 >>CCDS14509.1 BEX3 gene_id:27018|Hs108|chrX (101 aa) initn: 732 init1: 732 opt: 732 Z-score: 915.4 bits: 174.4 E(32554): 1.1e-44 Smith-Waterman score: 732; 100.0% identity (100.0% similar) in 101 aa overlap (11-111:1-101) 10 20 30 40 50 60 pF1KB8 MANIHQENEEMEQPMQNGEEDRPLGGGEGHQPAGNRRGQARRLAPNFRWAIPNRQINDGM :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 MEQPMQNGEEDRPLGGGEGHQPAGNRRGQARRLAPNFRWAIPNRQINDGM 10 20 30 40 50 70 80 90 100 110 pF1KB8 GGDGDDMEIFMEEMREIRRKLRELQLRNCLRILMGELSNHHDHHDEFCLMP ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 GGDGDDMEIFMEEMREIRRKLRELQLRNCLRILMGELSNHHDHHDEFCLMP 60 70 80 90 100 >>CCDS35350.1 BEX5 gene_id:340542|Hs108|chrX (111 aa) initn: 393 init1: 188 opt: 406 Z-score: 512.4 bits: 100.0 E(32554): 3.2e-22 Smith-Waterman score: 406; 57.0% identity (73.7% similar) in 114 aa overlap (1-111:1-111) 10 20 30 40 50 pF1KB8 MANIHQENEEMEQ-PMQNGEEDRPLGGGEGHQPAGNRRGQARRLAPNFRWAIPNRQIN-- : :. .::. .:. :.:: : ::::: ..:.:: .: ::.: .::: .. CCDS35 MENVPKENKVVEKAPVQN--EAPALGGGEYQEPGGNVKGVWAPPAPGFGEDVPNRLVDNI 10 20 30 40 50 60 70 80 90 100 110 pF1KB8 DGMGGDGDDMEIFMEEMREIRRKLRELQLRNCLRILMGELSNHHDHHDEFCLMP : . ::::::: :::::::.:::.:::::: ::::.:. :::::::::::: CCDS35 DMIDGDGDDMERFMEEMRELRRKIRELQLRYSLRILIGD-PPHHDHHDEFCLMP 60 70 80 90 100 110 >>CCDS35355.1 BEX4 gene_id:56271|Hs108|chrX (120 aa) initn: 394 init1: 131 opt: 371 Z-score: 468.7 bits: 92.0 E(32554): 8.7e-20 Smith-Waterman score: 371; 55.0% identity (75.7% similar) in 111 aa overlap (3-111:16-120) 10 20 30 40 pF1KB8 MANIHQENEEMEQ-PMQNGEEDRPLGGGEGHQPAGN-RRGQARRLAP : .:::: :: : :: ::.: ::::::..:.:: :::..:::.: CCDS35 MESKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRRLVP 10 20 30 40 50 60 50 60 70 80 90 100 pF1KB8 NFRWAIPNRQINDGMGGDGDDMEIFMEEMREIRRKLRELQLRNCLRILMGELSNHHDHHD :::::::::.:. . . : :.: :. .: ::.:: :: :.:. .:. : .::.: CCDS35 NFRWAIPNRHIEHNEARD--DVERFVGQMMEIKRKTREQQMRHYMRFQTPEPDNHYD--- 70 80 90 100 110 110 pF1KB8 EFCLMP :::.: CCDS35 -FCLIP 120 >>CCDS35354.1 BEX1 gene_id:55859|Hs108|chrX (125 aa) initn: 239 init1: 105 opt: 263 Z-score: 335.1 bits: 67.3 E(32554): 2.4e-12 Smith-Waterman score: 263; 43.4% identity (62.8% similar) in 113 aa overlap (1-111:14-125) 10 20 30 40 pF1KB8 MANIHQENEEMEQPMQNGEE-DRPLGGGEGHQPAGNRRG-QARRLAP : : .::::: :: ..:: :: .:: : :::: ..:. CCDS35 MESKEKRAVNSLSMENANQENEEKEQVANKGEPLALPLDAGEYCVPRGNRRRFRVRQPIL 10 20 30 40 50 60 50 60 70 80 90 100 pF1KB8 NFRWAIPNRQINDGMGGDGDDMEIFMEEMREIRRKLRELQLRNCLRILMGELSNHHDHHD ..:: . .: . ..:: . ::.:.. .:::: :: . :: . . :::::: CCDS35 QYRWDMMHRLGEPQARMREENMERIGEEVRQLMEKLREKQLSHSLRAVSTD-PPHHDHHD 70 80 90 100 110 110 pF1KB8 EFCLMP :::::: CCDS35 EFCLMP 120 111 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Fri Nov 4 15:06:11 2016 done: Fri Nov 4 15:06:11 2016 Total Scan time: 1.590 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]