Result of FASTA (ccds) for
pF1KB8796
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8796, 333 aa
1>>>pF1KB8796 333 - 333 aa - 333 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2646+/-0.000944; mu= 16.1868+/- 0.056
mean_var=124.8461+/-38.845, 0's: 0 Z-trim(106.1): 268 B-trim: 1125 in 2/47
Lambda= 0.114785
statistics sampled from 8301 (8776) to 8301 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.62), E-opt: 0.2 (0.27), width: 16
Scan time: 2.590
The best scores are: opt bits E(32554)
CCDS2736.1 XCR1 gene_id:2829|Hs108|chr3 ( 333) 2242 383.0 1.8e-106
CCDS43078.1 CCR2 gene_id:729230|Hs108|chr3 ( 374) 699 127.6 1.6e-29
CCDS46813.1 CCR2 gene_id:729230|Hs108|chr3 ( 360) 696 127.0 2.2e-29
CCDS43069.1 CX3CR1 gene_id:1524|Hs108|chr3 ( 355) 689 125.9 4.9e-29
CCDS54571.1 CX3CR1 gene_id:1524|Hs108|chr3 ( 387) 689 125.9 5.2e-29
CCDS46420.1 CXCR4 gene_id:7852|Hs108|chr2 ( 352) 608 112.5 5.4e-25
CCDS33295.1 CXCR4 gene_id:7852|Hs108|chr2 ( 356) 608 112.5 5.4e-25
CCDS2735.1 CXCR6 gene_id:10663|Hs108|chr3 ( 342) 542 101.5 1e-21
CCDS3075.1 ACKR4 gene_id:51554|Hs108|chr3 ( 350) 487 92.4 5.7e-19
CCDS2684.1 CCR8 gene_id:1237|Hs108|chr3 ( 355) 443 85.1 9.1e-17
CCDS14416.1 CXCR3 gene_id:2833|Hs108|chrX ( 368) 415 80.5 2.3e-15
CCDS48135.1 CXCR3 gene_id:2833|Hs108|chrX ( 415) 415 80.6 2.5e-15
CCDS2656.1 CCR4 gene_id:1233|Hs108|chr3 ( 360) 410 79.7 4e-15
CCDS2148.1 GPR17 gene_id:2840|Hs108|chr2 ( 367) 400 78.0 1.3e-14
CCDS2706.1 ACKR2 gene_id:1238|Hs108|chr3 ( 384) 386 75.7 6.6e-14
CCDS2739.1 CCR5 gene_id:1234|Hs108|chr3 ( 352) 372 73.4 3.1e-13
CCDS2408.1 CXCR2 gene_id:3579|Hs108|chr2 ( 360) 366 72.4 6.3e-13
CCDS43079.1 CCRL2 gene_id:9034|Hs108|chr3 ( 344) 358 71.0 1.5e-12
CCDS46814.1 CCRL2 gene_id:9034|Hs108|chr3 ( 356) 358 71.1 1.6e-12
CCDS10429.1 SSTR5 gene_id:6755|Hs108|chr16 ( 364) 350 69.7 4e-12
CCDS2738.1 CCR3 gene_id:1232|Hs108|chr3 ( 355) 346 69.1 6.2e-12
CCDS54574.1 CCR3 gene_id:1232|Hs108|chr3 ( 376) 346 69.1 6.4e-12
CCDS5298.1 CCR6 gene_id:1235|Hs108|chr6 ( 374) 339 67.9 1.4e-11
CCDS2737.1 CCR1 gene_id:1230|Hs108|chr3 ( 355) 334 67.1 2.5e-11
CCDS9412.1 CYSLTR2 gene_id:57105|Hs108|chr13 ( 346) 332 66.7 3e-11
CCDS2409.1 CXCR1 gene_id:3577|Hs108|chr2 ( 350) 329 66.2 4.3e-11
CCDS5322.1 GPER1 gene_id:2852|Hs108|chr7 ( 375) 328 66.1 5.1e-11
CCDS12049.1 KISS1R gene_id:84634|Hs108|chr19 ( 398) 325 65.7 7.4e-11
>>CCDS2736.1 XCR1 gene_id:2829|Hs108|chr3 (333 aa)
initn: 2242 init1: 2242 opt: 2242 Z-score: 2024.9 bits: 383.0 E(32554): 1.8e-106
Smith-Waterman score: 2242; 100.0% identity (100.0% similar) in 333 aa overlap (1-333:1-333)
10 20 30 40 50 60
pF1KB8 MESSGNPESTTFFYYDLQSQPCENQAWVFATLATTVLYCLVFLLSLVGNSLVLWVLVKYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 MESSGNPESTTFFYYDLQSQPCENQAWVFATLATTVLYCLVFLLSLVGNSLVLWVLVKYE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 SLESLTNIFILNLCLSDLVFACLLPVWISPYHWGWVLGDFLCKLLNMIFSISLYSSIFFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 SLESLTNIFILNLCLSDLVFACLLPVWISPYHWGWVLGDFLCKLLNMIFSISLYSSIFFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 TIMTIHRYLSVVSPLSTLRVPTLRCRVLVTMAVWVASILSSILDTIFHKVLSSGCDYSEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 TIMTIHRYLSVVSPLSTLRVPTLRCRVLVTMAVWVASILSSILDTIFHKVLSSGCDYSEL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 TWYLTSVYQHNLFFLLSLGIILFCYVEILRTLFRSRSKRRHRTVKLIFAIVVAYFLSWGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 TWYLTSVYQHNLFFLLSLGIILFCYVEILRTLFRSRSKRRHRTVKLIFAIVVAYFLSWGP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 YNFTLFLQTLFRTQIIRSCEAKQQLEYALLICRNLAFSHCCFNPVLYVFVGVKFRTHLKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 YNFTLFLQTLFRTQIIRSCEAKQQLEYALLICRNLAFSHCCFNPVLYVFVGVKFRTHLKH
250 260 270 280 290 300
310 320 330
pF1KB8 VLRQFWFCRLQAPSPASIPHSPGAFAYEGASFY
:::::::::::::::::::::::::::::::::
CCDS27 VLRQFWFCRLQAPSPASIPHSPGAFAYEGASFY
310 320 330
>>CCDS43078.1 CCR2 gene_id:729230|Hs108|chr3 (374 aa)
initn: 655 init1: 356 opt: 699 Z-score: 643.4 bits: 127.6 E(32554): 1.6e-29
Smith-Waterman score: 699; 36.5% identity (68.4% similar) in 329 aa overlap (4-323:16-336)
10 20 30 40
pF1KB8 MESSGNPESTTFFYYDLQSQPCE--NQAWVFATLATTVLYCLVFLLSL
::. : :::: :: . ::. . . : : :: :::....
CCDS43 MLSTSRSRFIRNTNESGE-EVTTFFDYDY-GAPCHKFDVKQIGAQLLPP-LYSLVFIFGF
10 20 30 40 50
50 60 70 80 90 100
pF1KB8 VGNSLVLWVLVKYESLESLTNIFILNLCLSDLVFACLLPVWISPYHWGWVLGDFLCKLLN
::: ::. .:.. ..:. ::.:..::: .:::.: ::.: ::.:. .:::..
CCDS43 VGNMLVVLILINCKKLKCLTDIYLLNLAISDLLFLITLPLWAHSAANEWVFGNAMCKLFT
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB8 MIFSISLYSSIFFLTIMTIHRYLSVVSPLSTLRVPTLRCRVLVTMAVWVASILSSILDTI
.. :. ...:::. ..:: :::..: . .:.. :. :.... .:......:. :
CCDS43 GLYHIGYFGGIFFIILLTIDRYLAIVHAVFALKARTVTFGVVTSVITWLVAVFASVPGII
120 130 140 150 160 170
170 180 190 200 210
pF1KB8 FHKVLSSG----CD-YSELTWY-LTSVYQHNLFFLLSLGIILFCYVEILRTLFRSRS-KR
: : . : : : . ..... : ..: : :...:: ::.::.: :. :.
CCDS43 FTKCQKEDSVYVCGPYFPRGWNNFHTIMRNILGLVLPLLIMVICYSGILKTLLRCRNEKK
180 190 200 210 220 230
220 230 240 250 260 270
pF1KB8 RHRTVKLIFAIVVAYFLSWGPYNFTLFLQTLFRTQIIRSCEAKQQLEYALLICRNLAFSH
:::.:..::.:...::: : :::....:.:. . . .::. .::. : . ..:...:
CCDS43 RHRAVRVIFTIMIVYFLFWTPYNIVILLNTFQEFFGLSNCESTSQLDQATQVTETLGMTH
240 250 260 270 280 290
280 290 300 310 320 330
pF1KB8 CCFNPVLYVFVGVKFRTHLKHVLRQFWFCRLQAPSPASIPHSPGAFAYEGASFY
::.::..:.::: :::. : :. ::. :: . .::
CCDS43 CCINPIIYAFVGEKFRS-LFHIALG---CRI-APLQKPVCGGPGVRPGKNVKVTTQGLLD
300 310 320 330 340 350
CCDS43 GRGKGKSIGRAPEASLQDKEGA
360 370
>>CCDS46813.1 CCR2 gene_id:729230|Hs108|chr3 (360 aa)
initn: 659 init1: 356 opt: 696 Z-score: 640.9 bits: 127.0 E(32554): 2.2e-29
Smith-Waterman score: 705; 36.7% identity (69.1% similar) in 324 aa overlap (4-313:16-333)
10 20 30 40
pF1KB8 MESSGNPESTTFFYYDLQSQPCE--NQAWVFATLATTVLYCLVFLLSL
::. : :::: :: . ::. . . : : :: :::....
CCDS46 MLSTSRSRFIRNTNESGE-EVTTFFDYDYGA-PCHKFDVKQIGAQLLPP-LYSLVFIFGF
10 20 30 40 50
50 60 70 80 90 100
pF1KB8 VGNSLVLWVLVKYESLESLTNIFILNLCLSDLVFACLLPVWISPYHWGWVLGDFLCKLLN
::: ::. .:.. ..:. ::.:..::: .:::.: ::.: ::.:. .:::..
CCDS46 VGNMLVVLILINCKKLKCLTDIYLLNLAISDLLFLITLPLWAHSAANEWVFGNAMCKLFT
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB8 MIFSISLYSSIFFLTIMTIHRYLSVVSPLSTLRVPTLRCRVLVTMAVWVASILSSILDTI
.. :. ...:::. ..:: :::..: . .:.. :. :.... .:......:. :
CCDS46 GLYHIGYFGGIFFIILLTIDRYLAIVHAVFALKARTVTFGVVTSVITWLVAVFASVPGII
120 130 140 150 160 170
170 180 190 200 210
pF1KB8 FHKVLSSG----CD-YSELTWY-LTSVYQHNLFFLLSLGIILFCYVEILRTLFRSRS-KR
: : . : : : . ..... : ..: : :...:: ::.::.: :. :.
CCDS46 FTKCQKEDSVYVCGPYFPRGWNNFHTIMRNILGLVLPLLIMVICYSGILKTLLRCRNEKK
180 190 200 210 220 230
220 230 240 250 260 270
pF1KB8 RHRTVKLIFAIVVAYFLSWGPYNFTLFLQTLFRTQIIRSCEAKQQLEYALLICRNLAFSH
:::.:..::.:...::: : :::....:.:. . . .::. .::. : . ..:...:
CCDS46 RHRAVRVIFTIMIVYFLFWTPYNIVILLNTFQEFFGLSNCESTSQLDQATQVTETLGMTH
240 250 260 270 280 290
280 290 300 310 320 330
pF1KB8 CCFNPVLYVFVGVKFRTHL-----KHVLRQFWFCRLQAPSPASIPHSPGAFAYEGASFY
::.::..:.::: ::: .: ::. ..: :. : :
CCDS46 CCINPIIYAFVGEKFRRYLSVFFRKHITKRF--CK-QCPVFYRETVDGVTSTNTPSTGEQ
300 310 320 330 340 350
CCDS46 EVSAGL
360
>>CCDS43069.1 CX3CR1 gene_id:1524|Hs108|chr3 (355 aa)
initn: 653 init1: 349 opt: 689 Z-score: 634.7 bits: 125.9 E(32554): 4.9e-29
Smith-Waterman score: 689; 37.0% identity (70.0% similar) in 303 aa overlap (7-301:5-307)
10 20 30 40 50
pF1KB8 MESSGNPESTTF-FYYDLQSQPCE-NQAWVFATLATTVLYCLVFLLSLVGNSLVLWVLVK
:::.: : :: .. : .. ::.:. ...: ..: ..:::: ::...:..
CCDS43 MDQFPESVTENFEYDDLAEACYIGDIVVFGTVFLSIFYSVIFAIGLVGNLLVVFALTN
10 20 30 40 50
60 70 80 90 100 110
pF1KB8 YESLESLTNIFILNLCLSDLVFACLLPVWISPYHWGWVLGDFLCKLLNMIFSISLYSSIF
.. .:.:.:..::: ::::.:. :: : : . .::. . .: :....:::
CCDS43 SKKPKSVTDIYLLNLALSDLLFVATLPFWTHYLINEKGLHNAMCKFTTAFFFIGFFGSIF
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB8 FLTIMTIHRYLSVVSPLSTLRVPTLRCRVLVTMAVWVASILSSILDTIFHKVLSSGC--D
:.:...: :::..: ... :.. : ....::.:.:: . . .: : . : :
CCDS43 FITVISIDRYLAIVLAANSMNNRTVQHGVTISLGVWAAAILVAAPQFMFTKQKENECLGD
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB8 YSELT---W-YLTSVYQHNLFFLLSLGIILFCYVEILRTLFRSRSKRRHRTVKLIFAIVV
: :. : : .: . : ::: : :. .:: .:..::: ..... ...:::. .:.
CCDS43 YPEVLQEIWPVLRNVETNFLGFLLPLLIMSYCYFRIIQTLFSCKNHKKAKAIKLILLVVI
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB8 AYFLSWGPYNFTLFLQTLFRTQIIRSCEAKQQLEYALLICRNLAFSHCCFNPVLYVFVGV
..:: : ::: .::.:: ... ::. ...:. :: . ...::::::.::..:.:.:
CCDS43 VFFLFWTPYNVMIFLETLKLYDFFPSCDMRKDLRLALSVTETVAFSHCCLNPLIYAFAGE
240 250 260 270 280 290
300 310 320 330
pF1KB8 KFRTHLKHVLRQFWFCRLQAPSPASIPHSPGAFAYEGASFY
::: .: :.
CCDS43 KFRRYLYHLYGKCLAVLCGRSVHVDFSSSESQRSRHGSVLSSNFTYHTSDGDALLLL
300 310 320 330 340 350
>>CCDS54571.1 CX3CR1 gene_id:1524|Hs108|chr3 (387 aa)
initn: 653 init1: 349 opt: 689 Z-score: 634.3 bits: 125.9 E(32554): 5.2e-29
Smith-Waterman score: 689; 37.0% identity (70.0% similar) in 303 aa overlap (7-301:37-339)
10 20 30
pF1KB8 MESSGNPESTTF-FYYDLQSQPCE-NQAWVFATLAT
:::.: : :: .. : .. ::.:.
CCDS54 AFKLADLDFRKSSLASGWRMASGAFTMDQFPESVTENFEYDDLAEACYIGDIVVFGTVFL
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB8 TVLYCLVFLLSLVGNSLVLWVLVKYESLESLTNIFILNLCLSDLVFACLLPVWISPYHWG
...: ..: ..:::: ::...:.. .. .:.:.:..::: ::::.:. :: :
CCDS54 SIFYSVIFAIGLVGNLLVVFALTNSKKPKSVTDIYLLNLALSDLLFVATLPFWTHYLINE
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB8 WVLGDFLCKLLNMIFSISLYSSIFFLTIMTIHRYLSVVSPLSTLRVPTLRCRVLVTMAVW
: . .::. . .: :....::::.:...: :::..: ... :.. : ....::
CCDS54 KGLHNAMCKFTTAFFFIGFFGSIFFITVISIDRYLAIVLAANSMNNRTVQHGVTISLGVW
130 140 150 160 170 180
160 170 180 190 200
pF1KB8 VASILSSILDTIFHKVLSSGC--DYSELT---W-YLTSVYQHNLFFLLSLGIILFCYVEI
.:.:: . . .: : . : :: :. : : .: . : ::: : :. .:: .:
CCDS54 AAAILVAAPQFMFTKQKENECLGDYPEVLQEIWPVLRNVETNFLGFLLPLLIMSYCYFRI
190 200 210 220 230 240
210 220 230 240 250 260
pF1KB8 LRTLFRSRSKRRHRTVKLIFAIVVAYFLSWGPYNFTLFLQTLFRTQIIRSCEAKQQLEYA
..::: ..... ...:::. .:...:: : ::: .::.:: ... ::. ...:. :
CCDS54 IQTLFSCKNHKKAKAIKLILLVVIVFFLFWTPYNVMIFLETLKLYDFFPSCDMRKDLRLA
250 260 270 280 290 300
270 280 290 300 310 320
pF1KB8 LLICRNLAFSHCCFNPVLYVFVGVKFRTHLKHVLRQFWFCRLQAPSPASIPHSPGAFAYE
: . ...::::::.::..:.:.: ::: .: :.
CCDS54 LSVTETVAFSHCCLNPLIYAFAGEKFRRYLYHLYGKCLAVLCGRSVHVDFSSSESQRSRH
310 320 330 340 350 360
330
pF1KB8 GASFY
CCDS54 GSVLSSNFTYHTSDGDALLLL
370 380
>>CCDS46420.1 CXCR4 gene_id:7852|Hs108|chr2 (352 aa)
initn: 579 init1: 321 opt: 608 Z-score: 562.3 bits: 112.5 E(32554): 5.4e-25
Smith-Waterman score: 608; 31.6% identity (67.7% similar) in 297 aa overlap (15-302:21-317)
10 20 30 40 50
pF1KB8 MESSGNPESTTFFYYDLQSQPC-ENQAWVFATLATTVLYCLVFLLSLVGNSLVL
:: ...:: ... : . ..: ..:: ..:::.::.
CCDS46 MEGISIYTSDNYTEEMGSGDYDSMKEPCFREENANFNKIFLPTIYSIIFLTGIVGNGLVI
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 WVLVKYESLESLTNIFILNLCLSDLVFACLLPVWISPYHWGWVLGDFLCKLLNMIFSISL
:. ..:.:.:. . :.: ..::.:. :: : .: .:.:::: ...:....:
CCDS46 LVMGYQKKLRSMTDKYRLHLSVADLLFVITLPFWAVDAVANWYFGNFLCKAVHVIYTVNL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 YSSIFFLTIMTIHRYLSVVSPLSTLRVPTLRCRVLVTMAVWVASILSSILDTIFHKVLSS
:::...:..... :::..: .. : : . .: ..::. ..: .: : :: .: .
CCDS46 YSSVLILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSEA
130 140 150 160 170 180
180 190 200 210 220
pF1KB8 G----CD--YSELTWYLTSVYQHNLFFLLSLGIILF-CYVEILRTLFRSRSKRRHRTVKL
:: : . : .. .:: . :. ::... :: :. : .:.........:
CCDS46 DDRYICDRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKGHQKRKALKT
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB8 IFAIVVAYFLSWGPYNFTLFLQTLFRTQIIRS-CEAKQQLEYALLICRNLAFSHCCFNPV
...:.: : :: . . ..... .::.. :: .. .. . : . ::: :::.::.
CCDS46 TVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPI
250 260 270 280 290 300
290 300 310 320 330
pF1KB8 LYVFVGVKFRTHLKHVLRQFWFCRLQAPSPASIPHSPGAFAYEGASFY
::.:.:.::.: .:.:
CCDS46 LYAFLGAKFKTSAQHALTSVSRGSSLKILSKGKRGGHSSVSTESESSSFHSS
310 320 330 340 350
>>CCDS33295.1 CXCR4 gene_id:7852|Hs108|chr2 (356 aa)
initn: 579 init1: 321 opt: 608 Z-score: 562.2 bits: 112.5 E(32554): 5.4e-25
Smith-Waterman score: 608; 31.6% identity (67.7% similar) in 297 aa overlap (15-302:25-321)
10 20 30 40
pF1KB8 MESSGNPESTTFFYYDLQSQPC-ENQAWVFATLATTVLYCLVFLLSLVGN
:: ...:: ... : . ..: ..:: ..:::
CCDS33 MSIPLPLLQIYTSDNYTEEMGSGDYDSMKEPCFREENANFNKIFLPTIYSIIFLTGIVGN
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB8 SLVLWVLVKYESLESLTNIFILNLCLSDLVFACLLPVWISPYHWGWVLGDFLCKLLNMIF
.::. :. ..:.:.:. . :.: ..::.:. :: : .: .:.:::: ...:.
CCDS33 GLVILVMGYQKKLRSMTDKYRLHLSVADLLFVITLPFWAVDAVANWYFGNFLCKAVHVIY
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB8 SISLYSSIFFLTIMTIHRYLSVVSPLSTLRVPTLRCRVLVTMAVWVASILSSILDTIFHK
...::::...:..... :::..: .. : : . .: ..::. ..: .: : :: .
CCDS33 TVNLYSSVLILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFAN
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB8 VLSSG----CD--YSELTWYLTSVYQHNLFFLLSLGIILF-CYVEILRTLFRSRSKRRHR
: . :: : . : .. .:: . :. ::... :: :. : .:.......
CCDS33 VSEADDRYICDRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKGHQKRK
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB8 TVKLIFAIVVAYFLSWGPYNFTLFLQTLFRTQIIRS-CEAKQQLEYALLICRNLAFSHCC
..: ...:.: : :: . . ..... .::.. :: .. .. . : . ::: :::
CCDS33 ALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCC
250 260 270 280 290 300
290 300 310 320 330
pF1KB8 FNPVLYVFVGVKFRTHLKHVLRQFWFCRLQAPSPASIPHSPGAFAYEGASFY
.::.::.:.:.::.: .:.:
CCDS33 LNPILYAFLGAKFKTSAQHALTSVSRGSSLKILSKGKRGGHSSVSTESESSSFHSS
310 320 330 340 350
>>CCDS2735.1 CXCR6 gene_id:10663|Hs108|chr3 (342 aa)
initn: 464 init1: 301 opt: 542 Z-score: 503.3 bits: 101.5 E(32554): 1e-21
Smith-Waterman score: 542; 31.4% identity (66.7% similar) in 303 aa overlap (8-303:8-304)
10 20 30 40 50
pF1KB8 MESSGNPESTTFFYYDLQSQPCENQAWV-FATLATTVLYCLVFLLSLVGNSLVLWVLVKY
:. : .. .:: :.: .. :. . .: .::. .:::::::: . . :
CCDS27 MAEHDYHEDYGFSSFNDSSQE-EHQDFLQFSKVFLPCMYLVVFVCGLVGNSLVLVISIFY
10 20 30 40 50
60 70 80 90 100 110
pF1KB8 ESLESLTNIFILNLCLSDLVFACLLPVWISPYHWGWVLGDFLCKLLNMIFSISLYSSIFF
..:.:::..:..:: :.::::.: :: : ::.:. .:: : :..:..:.:...
CCDS27 HKLQSLTDVFLVNLPLADLVFVCTLPFWAYAGIHEWVFGQVMCKSLLGIYTINFYTSMLI
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB8 LTIMTIHRYLSVVSPLSTLRVPTLRCRV--LVTMAVWVASILSSILDTIFHKVLSSG---
:: .:. :.. ::. .. . : .... .:: :.: :. . :. .:..
CCDS27 LTCITVDRFIVVVKATKAYNQQAKRMTWGKVTSLLIWVISLLVSLPQIIYGNVFNLDKLI
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB8 CDY-SELTWYLTSVYQHNLFFLLSLGIILFCYVEILRTLFRSRSKRRHRTVKLIFAIVVA
: : .: .. . : .: :.: : .. :: :..::... . ..::..:.:: ....
CCDS27 CGYHDEAISTVVLATQMTLGFFLPLLTMIVCYSVIIKTLLHAGGFQKHRSLKIIFLVMAV
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB8 YFLSWGPYNFTLFLQTLFRTQIIRSCEAKQQLEYALLICRNLAFSHCCFNPVLYVFVGVK
..:. :.:. :... : ...:.... . .:. . :.:::::.::..:
CCDS27 FLLTQMPFNLMKFIRSTHWEYY-----AMTSFHYTIMVTEAIAYLRACLNPVLYAFVSLK
240 250 260 270 280 290
300 310 320 330
pF1KB8 FRTHLKHVLRQFWFCRLQAPSPASIPHSPGAFAYEGASFY
:: .. ....
CCDS27 FRKNFWKLVKDIGCLPYLGVSHQWKSSEDNSKTFSASHNVEATSMFQL
300 310 320 330 340
>>CCDS3075.1 ACKR4 gene_id:51554|Hs108|chr3 (350 aa)
initn: 496 init1: 249 opt: 487 Z-score: 454.0 bits: 92.4 E(32554): 5.7e-19
Smith-Waterman score: 487; 28.5% identity (65.6% similar) in 302 aa overlap (29-319:39-335)
10 20 30 40 50
pF1KB8 MESSGNPESTTFFYYDLQSQPCENQAWVFATLATTVLYCLVFLLSLVGNSLVLWVLVK
:: . :. .::...:.:::.:. . .
CCDS30 TDYYYEENEMNGTYDYSQYELICIKEDVREFAKVFLPVFLTIVFVIGLAGNSMVVAIYAY
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 YESLESLTNIFILNLCLSDLVFACLLPVW-ISPYHWGWVLGDFLCKLLNMIFSISLYSSI
:.. .. :...:::: ..::.. :: : .. : ::::: ..::. . ...... :..
CCDS30 YKKQRTKTDVYILNLAVADLLLLFTLPFWAVNAVH-GWVLGKIMCKITSALYTLNFVSGM
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 FFLTIMTIHRYLSV--VSPLSTLRVPTLRCRVLVTMAVWVASILSSILDTIFHKVLSSGC
::. ..: ::..: : : . : : . . . ::.:.:: :: . .:. : ...
CCDS30 QFLACISIDRYVAVTKVPSQSGVGKP---CWI-ICFCVWMAAILLSIPQLVFYTVNDNAR
130 140 150 160 170 180
180 190 200 210 220
pF1KB8 DYSELTWYL-TSVYQHNLFFLLSLGIIL------FCYVEILRTLFRSRSKRRHRTVKLIF
. :: ::. .. . .:... :: :::.. . . : .:...
CCDS30 CIPIFPRYLGTSMKALIQMLEICIGFVVPFLIMGVCYFITARTLMKMPNIKISRPLKVLL
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB8 AIVVAYFLSWGPYNFTLFLQTL-FRTQIIRSCEAKQQLEYALLICRNLAFSHCCFNPVLY
..:...... :::.. : ... . ..: ::. ..... :. . ...:. : :.::.::
CCDS30 TVVIVFIVTQLPYNIVKFCRAIDIIYSLITSCNMSKRMDIAIQVTESIALFHSCLNPILY
250 260 270 280 290 300
290 300 310 320 330
pF1KB8 VFVGVKFRTHLKHVLRQFWFCRLQAPSPASIPHSPGAFAYEGASFY
::.:..:.... .: ... : : : .:
CCDS30 VFMGASFKNYVMKVAKKYGSWRRQRQSVEEFPFDSEGPTEPTSTFSI
310 320 330 340 350
>>CCDS2684.1 CCR8 gene_id:1237|Hs108|chr3 (355 aa)
initn: 695 init1: 386 opt: 443 Z-score: 414.5 bits: 85.1 E(32554): 9.1e-17
Smith-Waterman score: 747; 36.1% identity (71.1% similar) in 305 aa overlap (10-304:13-317)
10 20 30 40 50
pF1KB8 MESSGNPESTTFFYYDLQSQPCENQ-AWVFATLATTVLYCLVFLLSLVGNSLVLWVL
: ..: :. :.::. . . . : .:.:::.:..::.:::::. ::
CCDS26 MDYTLDLSVTTVTDYYYPDIFSSPCDAELIQTNGKLLLAVFYCLLFVFSLLGNSLVILVL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 VKYESLESLTNIFILNLCLSDLVFACLLPVWISPYHWGWVLGDFLCKLLNMIFSISLYSS
: ..:.:.:....::: ::::.:. .: ::.: .::... .. :..:::
CCDS26 VVCKKLRSITDVYLLNLALSDLLFVFSFPFQTYYLLDQWVFGTVMCKVVSGFYYIGFYSS
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 IFFLTIMTIHRYLSVVSPLSTLRVPTLRCRVLVTMAVWVASILSSILDTIFHKVLSSG--
.::.:.:.. :::.:: . .:.: :.: . . .:::...:...: .:..: :
CCDS26 MFFITLMSVDRYLAVVHAVYALKVRTIRMGTTLCLAVWLTAIMATIPLLVFYQVASEDGV
130 140 150 160 170 180
180 190 200 210 220
pF1KB8 --C----DYSELTWYLTSVYQHNLF-FLLSLGIILFCYVEILRTLFRSRSKRRHRTVKLI
: . . : : . . .. :.. .:. . :..:::..::. : : ... . ....:.
CCDS26 LQCYSFYNQQTLKWKIFTNFKMNILGLLIPFTIFMFCYIKILHQLKRCQNHNKTKAIRLV
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB8 FAIVVAYFLSWGPYNFTLFLQTLFRTQIIRSCEAKQQLEYALLICRNLAFSHCCFNPVLY
. .:.: .: : :.: .::: .: .:. .: .::: :: . . ..:.::: :::.:
CCDS26 LIVVIASLLFWVPFNVVLFLTSLHSMHILDGCSISQQLTYATHVTEIISFTHCCVNPVIY
250 260 270 280 290 300
290 300 310 320 330
pF1KB8 VFVGVKFRTHLKHVLRQFWFCRLQAPSPASIPHSPGAFAYEGASFY
.::: ::. ::......
CCDS26 AFVGEKFKKHLSEIFQKSCSQIFNYLGRQMPRESCEKSSSCQQHSSRSSSVDYIL
310 320 330 340 350
333 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 15:40:16 2016 done: Fri Nov 4 15:40:17 2016
Total Scan time: 2.590 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]