FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8861, 98 aa
  1>>>pF1KB8861 98 - 98 aa - 98 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.1906+/-0.000696; mu= 10.1703+/- 0.042
 mean_var=62.9846+/-12.536, 0's: 0 Z-trim(109.0): 25  B-trim: 55 in 1/49
 Lambda= 0.161606
 statistics sampled from 10598 (10621) to 10598 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.724), E-opt: 0.2 (0.326), width:  16
 Scan time:  1.380

The best scores are:                                      opt bits E(32554)
CCDS30874.1 S100A13 gene_id:6284|Hs108|chr1        (  98)  614 150.9 1.2e-37
CCDS1046.1 S100A14 gene_id:57402|Hs108|chr1        ( 104)  237 63.0 3.5e-11


>>CCDS30874.1 S100A13 gene_id:6284|Hs108|chr1             (98 aa)
 initn: 614 init1: 614 opt: 614  Z-score: 789.6  bits: 150.9 E(32554): 1.2e-37
Smith-Waterman score: 614; 100.0% identity (100.0% similar) in 98 aa overlap (1-98:1-98)

               10        20        30        40        50        60
pF1KB8 MAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKM
               10        20        30        40        50        60

               70        80        90        
pF1KB8 KSLDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRKK
       ::::::::::::::::::::::::::::::::::::::
CCDS30 KSLDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRKK
               70        80        90        

>>CCDS1046.1 S100A14 gene_id:57402|Hs108|chr1             (104 aa)
 initn: 227 init1: 202 opt: 237  Z-score: 314.2  bits: 63.0 E(32554): 3.5e-11
Smith-Waterman score: 237; 38.0% identity (77.2% similar) in 92 aa overlap (3-94:12-102)

                        10        20        30        40        50 
pF1KB8          MAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLK
                  :. ....:..:::.. .:  ..  :: :..:. .:...:::::::::. 
CCDS10 MGQCRSANAEDAQEFSDVERAIETLIKNFHQYSV-EGGKETLTPSELRDLVTQQLPHLMP
               10        20        30         40        50         

              60        70        80        90        
pF1KB8 DVGSLDEKMKSLDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRKK
       .  .:.::. .:   .::.:.:  .:.:::: :: .. .. ..    
CCDS10 SNCGLEEKIANLGSCNDSKLEFRSFWELIGEAAKSVKLERPVRGH  
      60        70        80        90       100      




98 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 16:11:43 2016 done: Fri Nov  4 16:11:43 2016
 Total Scan time:  1.380 Total Display time: -0.040

Function used was FASTA [36.3.4 Apr, 2011]