Result of FASTA (omim) for
pF1KB8864
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8864, 110 aa
1>>>pF1KB8864 110 - 110 aa - 110 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.6977+/-0.000254; mu= 13.3688+/- 0.016
mean_var=55.0771+/-11.039, 0's: 0 Z-trim(122.1): 28 B-trim: 662 in 1/51
Lambda= 0.172818
statistics sampled from 39738 (39768) to 39738 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.827), E-opt: 0.2 (0.466), width: 16
Scan time: 4.980
The best scores are: opt bits E(85289)
NP_001278826 (OMIM: 125852,176730,606176,613370,61 ( 110) 765 197.4 3.9e-51
NP_000198 (OMIM: 125852,176730,606176,613370,61621 ( 110) 765 197.4 3.9e-51
NP_001172026 (OMIM: 125852,176730,606176,613370,61 ( 110) 765 197.4 3.9e-51
NP_001172027 (OMIM: 125852,176730,606176,613370,61 ( 110) 765 197.4 3.9e-51
NP_001007140 (OMIM: 130650,147470,180860,194070,61 ( 180) 126 38.2 0.0053
NP_000603 (OMIM: 130650,147470,180860,194070,61648 ( 180) 126 38.2 0.0053
NP_001278791 (OMIM: 130650,147470,180860,194070,61 ( 180) 126 38.2 0.0053
NP_001278790 (OMIM: 130650,147470,180860,194070,61 ( 180) 126 38.2 0.0053
NP_001121070 (OMIM: 130650,147470,180860,194070,61 ( 236) 126 38.3 0.0066
NP_001252516 (OMIM: 146738,219050) insulin-like 3 ( 157) 122 37.2 0.0095
>>NP_001278826 (OMIM: 125852,176730,606176,613370,616214 (110 aa)
initn: 765 init1: 765 opt: 765 Z-score: 1039.0 bits: 197.4 E(85289): 3.9e-51
Smith-Waterman score: 765; 100.0% identity (100.0% similar) in 110 aa overlap (1-110:1-110)
10 20 30 40 50 60
pF1KB8 MALWMRLLPLLALLALWGPDPAAAFVNQHLCGSHLVEALYLVCGERGFFYTPKTRREAED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MALWMRLLPLLALLALWGPDPAAAFVNQHLCGSHLVEALYLVCGERGFFYTPKTRREAED
10 20 30 40 50 60
70 80 90 100 110
pF1KB8 LQVGQVELGGGPGAGSLQPLALEGSLQKRGIVEQCCTSICSLYQLENYCN
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQVGQVELGGGPGAGSLQPLALEGSLQKRGIVEQCCTSICSLYQLENYCN
70 80 90 100 110
>>NP_000198 (OMIM: 125852,176730,606176,613370,616214) i (110 aa)
initn: 765 init1: 765 opt: 765 Z-score: 1039.0 bits: 197.4 E(85289): 3.9e-51
Smith-Waterman score: 765; 100.0% identity (100.0% similar) in 110 aa overlap (1-110:1-110)
10 20 30 40 50 60
pF1KB8 MALWMRLLPLLALLALWGPDPAAAFVNQHLCGSHLVEALYLVCGERGFFYTPKTRREAED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MALWMRLLPLLALLALWGPDPAAAFVNQHLCGSHLVEALYLVCGERGFFYTPKTRREAED
10 20 30 40 50 60
70 80 90 100 110
pF1KB8 LQVGQVELGGGPGAGSLQPLALEGSLQKRGIVEQCCTSICSLYQLENYCN
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LQVGQVELGGGPGAGSLQPLALEGSLQKRGIVEQCCTSICSLYQLENYCN
70 80 90 100 110
>>NP_001172026 (OMIM: 125852,176730,606176,613370,616214 (110 aa)
initn: 765 init1: 765 opt: 765 Z-score: 1039.0 bits: 197.4 E(85289): 3.9e-51
Smith-Waterman score: 765; 100.0% identity (100.0% similar) in 110 aa overlap (1-110:1-110)
10 20 30 40 50 60
pF1KB8 MALWMRLLPLLALLALWGPDPAAAFVNQHLCGSHLVEALYLVCGERGFFYTPKTRREAED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MALWMRLLPLLALLALWGPDPAAAFVNQHLCGSHLVEALYLVCGERGFFYTPKTRREAED
10 20 30 40 50 60
70 80 90 100 110
pF1KB8 LQVGQVELGGGPGAGSLQPLALEGSLQKRGIVEQCCTSICSLYQLENYCN
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQVGQVELGGGPGAGSLQPLALEGSLQKRGIVEQCCTSICSLYQLENYCN
70 80 90 100 110
>>NP_001172027 (OMIM: 125852,176730,606176,613370,616214 (110 aa)
initn: 765 init1: 765 opt: 765 Z-score: 1039.0 bits: 197.4 E(85289): 3.9e-51
Smith-Waterman score: 765; 100.0% identity (100.0% similar) in 110 aa overlap (1-110:1-110)
10 20 30 40 50 60
pF1KB8 MALWMRLLPLLALLALWGPDPAAAFVNQHLCGSHLVEALYLVCGERGFFYTPKTRREAED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MALWMRLLPLLALLALWGPDPAAAFVNQHLCGSHLVEALYLVCGERGFFYTPKTRREAED
10 20 30 40 50 60
70 80 90 100 110
pF1KB8 LQVGQVELGGGPGAGSLQPLALEGSLQKRGIVEQCCTSICSLYQLENYCN
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQVGQVELGGGPGAGSLQPLALEGSLQKRGIVEQCCTSICSLYQLENYCN
70 80 90 100 110
>>NP_001007140 (OMIM: 130650,147470,180860,194070,616489 (180 aa)
initn: 217 init1: 115 opt: 126 Z-score: 174.8 bits: 38.2 E(85289): 0.0053
Smith-Waterman score: 159; 33.7% identity (54.8% similar) in 104 aa overlap (7-109:9-84)
10 20 30 40 50
pF1KB8 MALWMRLLPLLALLALWGPDPAAAFVNQHLCGSHLVEALYLVCGERGFFYT-PKTRRE
.: ::..::. . :: .. :::..::..: .:::.:::... : .:
NP_001 MGIPMGKSMLVLLTFLAFASCCIAAYRPSETLCGGELVDTLQFVCGDRGFYFSRPASRV-
10 20 30 40 50
60 70 80 90 100 110
pF1KB8 AEDLQVGQVELGGGPGAGSLQPLALEGSLQKRGIVEQCCTSICSLYQLENYCN
: ..:::::.:: :.: ::.::
NP_001 ---------------------------SRRSRGIVEECCFRSCDLALLETYCATPAKSER
60 70 80 90
NP_001 DVSTPPTVLPDNFPRYPVGKFFQYDTWKQSTQRLRRGLPALLRARRGHVLAKELEAFREA
100 110 120 130 140 150
>>NP_000603 (OMIM: 130650,147470,180860,194070,616489) i (180 aa)
initn: 217 init1: 115 opt: 126 Z-score: 174.8 bits: 38.2 E(85289): 0.0053
Smith-Waterman score: 159; 33.7% identity (54.8% similar) in 104 aa overlap (7-109:9-84)
10 20 30 40 50
pF1KB8 MALWMRLLPLLALLALWGPDPAAAFVNQHLCGSHLVEALYLVCGERGFFYT-PKTRRE
.: ::..::. . :: .. :::..::..: .:::.:::... : .:
NP_000 MGIPMGKSMLVLLTFLAFASCCIAAYRPSETLCGGELVDTLQFVCGDRGFYFSRPASRV-
10 20 30 40 50
60 70 80 90 100 110
pF1KB8 AEDLQVGQVELGGGPGAGSLQPLALEGSLQKRGIVEQCCTSICSLYQLENYCN
: ..:::::.:: :.: ::.::
NP_000 ---------------------------SRRSRGIVEECCFRSCDLALLETYCATPAKSER
60 70 80 90
NP_000 DVSTPPTVLPDNFPRYPVGKFFQYDTWKQSTQRLRRGLPALLRARRGHVLAKELEAFREA
100 110 120 130 140 150
>>NP_001278791 (OMIM: 130650,147470,180860,194070,616489 (180 aa)
initn: 217 init1: 115 opt: 126 Z-score: 174.8 bits: 38.2 E(85289): 0.0053
Smith-Waterman score: 159; 33.7% identity (54.8% similar) in 104 aa overlap (7-109:9-84)
10 20 30 40 50
pF1KB8 MALWMRLLPLLALLALWGPDPAAAFVNQHLCGSHLVEALYLVCGERGFFYT-PKTRRE
.: ::..::. . :: .. :::..::..: .:::.:::... : .:
NP_001 MGIPMGKSMLVLLTFLAFASCCIAAYRPSETLCGGELVDTLQFVCGDRGFYFSRPASRV-
10 20 30 40 50
60 70 80 90 100 110
pF1KB8 AEDLQVGQVELGGGPGAGSLQPLALEGSLQKRGIVEQCCTSICSLYQLENYCN
: ..:::::.:: :.: ::.::
NP_001 ---------------------------SRRSRGIVEECCFRSCDLALLETYCATPAKSER
60 70 80 90
NP_001 DVSTPPTVLPDNFPRYPVGKFFQYDTWKQSTQRLRRGLPALLRARRGHVLAKELEAFREA
100 110 120 130 140 150
>>NP_001278790 (OMIM: 130650,147470,180860,194070,616489 (180 aa)
initn: 217 init1: 115 opt: 126 Z-score: 174.8 bits: 38.2 E(85289): 0.0053
Smith-Waterman score: 159; 33.7% identity (54.8% similar) in 104 aa overlap (7-109:9-84)
10 20 30 40 50
pF1KB8 MALWMRLLPLLALLALWGPDPAAAFVNQHLCGSHLVEALYLVCGERGFFYT-PKTRRE
.: ::..::. . :: .. :::..::..: .:::.:::... : .:
NP_001 MGIPMGKSMLVLLTFLAFASCCIAAYRPSETLCGGELVDTLQFVCGDRGFYFSRPASRV-
10 20 30 40 50
60 70 80 90 100 110
pF1KB8 AEDLQVGQVELGGGPGAGSLQPLALEGSLQKRGIVEQCCTSICSLYQLENYCN
: ..:::::.:: :.: ::.::
NP_001 ---------------------------SRRSRGIVEECCFRSCDLALLETYCATPAKSER
60 70 80 90
NP_001 DVSTPPTVLPDNFPRYPVGKFFQYDTWKQSTQRLRRGLPALLRARRGHVLAKELEAFREA
100 110 120 130 140 150
>>NP_001121070 (OMIM: 130650,147470,180860,194070,616489 (236 aa)
initn: 218 init1: 115 opt: 126 Z-score: 173.1 bits: 38.3 E(85289): 0.0066
Smith-Waterman score: 159; 33.7% identity (54.8% similar) in 104 aa overlap (7-109:65-140)
10 20 30
pF1KB8 MALWMRLLPLLALLALWGPDPAAAFVNQHLCGSHLV
.: ::..::. . :: .. :::..::
NP_001 FWVGRKGELLRRTPVSSAMQTPMGIPMGKSMLVLLTFLAFASCCIAAYRPSETLCGGELV
40 50 60 70 80 90
40 50 60 70 80 90
pF1KB8 EALYLVCGERGFFYT-PKTRREAEDLQVGQVELGGGPGAGSLQPLALEGSLQKRGIVEQC
..: .:::.:::... : .: : ..:::::.:
NP_001 DTLQFVCGDRGFYFSRPASRV----------------------------SRRSRGIVEEC
100 110 120
100 110
pF1KB8 CTSICSLYQLENYCN
: :.: ::.::
NP_001 CFRSCDLALLETYCATPAKSERDVSTPPTVLPDNFPRYPVGKFFQYDTWKQSTQRLRRGL
130 140 150 160 170 180
>>NP_001252516 (OMIM: 146738,219050) insulin-like 3 isof (157 aa)
initn: 103 init1: 75 opt: 122 Z-score: 170.3 bits: 37.2 E(85289): 0.0095
Smith-Waterman score: 122; 31.8% identity (55.1% similar) in 107 aa overlap (4-102:8-109)
10 20 30 40 50
pF1KB8 MALWMRLLPLLALLALWGPDPAAAFVNQHLCGSHLVEALYLVCGERGFFYTPKTRR
: .: ::. :: :. . ..::: :.:.:: ::: : .. ..::
NP_001 MDPRLPAWALVLLGPALVFALGPAPTPE-MREKLCGHHFVRALVRVCG--GPRWSTEARR
10 20 30 40 50
60 70 80 90 100
pF1KB8 EA---EDLQVGQVELGGGPGAGSLQPLALEGSLQKRGIVEQCCTS-----ICSLYQLENY
: .. . .: .: .: .: .: ..:. :: . : : :::.
NP_001 PATGGDQRESHSVSQAGLKLLSSSNPPTL--TFQSVGISDVSCYSGWRDDICSMGWWPTV
60 70 80 90 100 110
110
pF1KB8 CN
NP_001 ISRWDLACSPCPRPLTITATTVQLPPTLHATAASVAVPNKTC
120 130 140 150
110 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 19:56:52 2016 done: Sat Nov 5 19:56:53 2016
Total Scan time: 4.980 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]