Result of FASTA (omim) for
pF1KB8871
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8871, 158 aa
1>>>pF1KB8871 158 - 158 aa - 158 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3651+/-0.000314; mu= 11.5334+/- 0.019
mean_var=59.6264+/-12.256, 0's: 0 Z-trim(116.1): 18 B-trim: 0 in 0/50
Lambda= 0.166094
statistics sampled from 27008 (27026) to 27008 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.703), E-opt: 0.2 (0.317), width: 16
Scan time: 4.980
The best scores are: opt bits E(85289)
NP_006754 (OMIM: 601597) protein BTG2 [Homo sapien ( 158) 1062 262.3 2.3e-70
NP_001722 (OMIM: 109580) protein BTG1 [Homo sapien ( 171) 620 156.4 1.9e-38
NP_001230806 (OMIM: 605523) protein Tob1 isoform 1 ( 345) 352 92.3 7.6e-19
NP_005740 (OMIM: 605523) protein Tob1 isoform 1 [H ( 345) 352 92.3 7.6e-19
NP_057356 (OMIM: 607396) protein Tob2 [Homo sapien ( 344) 336 88.5 1.1e-17
XP_016884028 (OMIM: 607396) PREDICTED: protein Tob ( 344) 336 88.5 1.1e-17
XP_005261372 (OMIM: 607396) PREDICTED: protein Tob ( 344) 336 88.5 1.1e-17
XP_006724168 (OMIM: 607396) PREDICTED: protein Tob ( 344) 336 88.5 1.1e-17
NP_006797 (OMIM: 605674) protein BTG3 isoform b [H ( 252) 291 77.6 1.5e-14
XP_016883755 (OMIM: 605674) PREDICTED: protein BTG ( 252) 291 77.6 1.5e-14
XP_016883754 (OMIM: 605674) PREDICTED: protein BTG ( 252) 291 77.6 1.5e-14
NP_060059 (OMIM: 605673) protein BTG4 [Homo sapien ( 223) 280 75.0 8.1e-14
XP_011541182 (OMIM: 605673) PREDICTED: protein BTG ( 226) 280 75.0 8.2e-14
XP_011541181 (OMIM: 605673) PREDICTED: protein BTG ( 244) 280 75.0 8.8e-14
NP_001124386 (OMIM: 605674) protein BTG3 isoform a ( 296) 281 75.3 8.8e-14
XP_011527743 (OMIM: 605674) PREDICTED: protein BTG ( 306) 281 75.3 9.1e-14
XP_011541180 (OMIM: 605673) PREDICTED: protein BTG ( 255) 280 75.0 9.1e-14
XP_011541178 (OMIM: 605673) PREDICTED: protein BTG ( 273) 280 75.0 9.7e-14
>>NP_006754 (OMIM: 601597) protein BTG2 [Homo sapiens] (158 aa)
initn: 1062 init1: 1062 opt: 1062 Z-score: 1384.2 bits: 262.3 E(85289): 2.3e-70
Smith-Waterman score: 1062; 100.0% identity (100.0% similar) in 158 aa overlap (1-158:1-158)
10 20 30 40 50 60
pF1KB8 MSHGKGTDMLPEIAAAVGFLSSLLRTRGCVSEQRLKVFSGALQEALTEHYKHHWFPEKPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MSHGKGTDMLPEIAAAVGFLSSLLRTRGCVSEQRLKVFSGALQEALTEHYKHHWFPEKPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KGSGYRCIRINHKMDPIISRVASQIGLSQPQLHQLLPSELTLWVDPYEVSYRIGEDGSIC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 KGSGYRCIRINHKMDPIISRVASQIGLSQPQLHQLLPSELTLWVDPYEVSYRIGEDGSIC
70 80 90 100 110 120
130 140 150
pF1KB8 VLYEEAPLAASCGLLTCKNQVLLGRSSPSKNYVMAVSS
::::::::::::::::::::::::::::::::::::::
NP_006 VLYEEAPLAASCGLLTCKNQVLLGRSSPSKNYVMAVSS
130 140 150
>>NP_001722 (OMIM: 109580) protein BTG1 [Homo sapiens] (171 aa)
initn: 693 init1: 611 opt: 620 Z-score: 811.2 bits: 156.4 E(85289): 1.9e-38
Smith-Waterman score: 686; 63.4% identity (86.0% similar) in 164 aa overlap (5-157:7-170)
10 20 30 40 50
pF1KB8 MSHGKGTDMLPEIAAAVGFLSSLLRTRGCVSEQRLKVFSGALQEALTEHYKHHWFPEK
... :. ::::::.:.:..:::.: .::..:..:: .::: :.:::::::::::
NP_001 MHPFYTRAATMIGEIAAAVSFISKFLRTKGLTSERQLQTFSQSLQELLAEHYKHHWFPEK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 PSKGSGYRCIRINHKMDPIISRVASQIGLSQPQLHQLLPSELTLWVDPYEVSYRIGEDGS
: ::::::::::::::::.:...:..::::. .: .::::::::::::::::::::::::
NP_001 PCKGSGYRCIRINHKMDPLIGQAAQRIGLSSQELFRLLPSELTLWVDPYEVSYRIGEDGS
70 80 90 100 110 120
120 130 140 150
pF1KB8 ICVLYEEAPLAASC----------GLLTCKNQVLLGRSSPSKNY-VMAVSS
:::::: .: ..: . ..::...::::.:::::: .:.::
NP_001 ICVLYEASPAGGSTQNSTNVQMVDSRISCKEELLLGRTSPSKNYNMMTVSG
130 140 150 160 170
>>NP_001230806 (OMIM: 605523) protein Tob1 isoform 1 [Ho (345 aa)
initn: 331 init1: 331 opt: 352 Z-score: 459.3 bits: 92.3 E(85289): 7.6e-19
Smith-Waterman score: 352; 40.5% identity (75.4% similar) in 126 aa overlap (9-134:1-124)
10 20 30 40 50 60
pF1KB8 MSHGKGTDMLPEIAAAVGFLSSLLRTRGCVSEQRLKVFSGALQEALTEHYKHHWFPEKPS
: :: .:..:. : : .. . ..:...:. :.. : ..:. ::.::::
NP_001 MQLEIQVALNFIISYLYNK--LPRRRVNIFGEELERLLKKKYEGHWYPEKPY
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 KGSGYRCIRINHKMDPIISRVASQIGLSQPQLHQLLPSELTLWVDPYEVSYRIGEDGSIC
::::.:::.:..:.::.: ..... ::. ... ::..:..:.::.::::.::: : .
NP_001 KGSGFRCIHIGEKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGPVK
60 70 80 90 100 110
130 140 150
pF1KB8 VLYEEAPLAASCGLLTCKNQVLLGRSSPSKNYVMAVSS
::: . .: :
NP_001 VLYVDDNNENGCELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMPR
120 130 140 150 160 170
>>NP_005740 (OMIM: 605523) protein Tob1 isoform 1 [Homo (345 aa)
initn: 331 init1: 331 opt: 352 Z-score: 459.3 bits: 92.3 E(85289): 7.6e-19
Smith-Waterman score: 352; 40.5% identity (75.4% similar) in 126 aa overlap (9-134:1-124)
10 20 30 40 50 60
pF1KB8 MSHGKGTDMLPEIAAAVGFLSSLLRTRGCVSEQRLKVFSGALQEALTEHYKHHWFPEKPS
: :: .:..:. : : .. . ..:...:. :.. : ..:. ::.::::
NP_005 MQLEIQVALNFIISYLYNK--LPRRRVNIFGEELERLLKKKYEGHWYPEKPY
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 KGSGYRCIRINHKMDPIISRVASQIGLSQPQLHQLLPSELTLWVDPYEVSYRIGEDGSIC
::::.:::.:..:.::.: ..... ::. ... ::..:..:.::.::::.::: : .
NP_005 KGSGFRCIHIGEKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGPVK
60 70 80 90 100 110
130 140 150
pF1KB8 VLYEEAPLAASCGLLTCKNQVLLGRSSPSKNYVMAVSS
::: . .: :
NP_005 VLYVDDNNENGCELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMPR
120 130 140 150 160 170
>>NP_057356 (OMIM: 607396) protein Tob2 [Homo sapiens] (344 aa)
initn: 311 init1: 311 opt: 336 Z-score: 438.6 bits: 88.5 E(85289): 1.1e-17
Smith-Waterman score: 336; 39.2% identity (73.6% similar) in 125 aa overlap (9-133:1-121)
10 20 30 40 50 60
pF1KB8 MSHGKGTDMLPEIAAAVGFLSSLLRTRGCVSEQRLKVFSGALQEALTEHYKHHWFPEKPS
: :: .:..:. : : .. . ..: .:. :.. : ..:. ::.::::
NP_057 MQLEIKVALNFIISYLYNK--LPRRRADLFGEELERLLKKKYEGHWYPEKPL
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 KGSGYRCIRINHKMDPIISRVASQIGLSQPQLHQLLPSELTLWVDPYEVSYRIGEDGSIC
::::.::..:.. .::.. .:.. ::. ... .: ::..:.::.::::.::: :..
NP_057 KGSGFRCVHIGEMVDPVVELAAKRSGLAVEDVRANVPEELSVWIDPFEVSYQIGEKGAVK
60 70 80 90 100 110
130 140 150
pF1KB8 VLYEEAPLAASCGLLTCKNQVLLGRSSPSKNYVMAVSS
::: . . .::
NP_057 VLYLDD--SEGCGAPELDKEIKSSFNPDAQVFVPIGSQDSSLSNSPSPSFGQSPSPTFIP
120 130 140 150 160
>>XP_016884028 (OMIM: 607396) PREDICTED: protein Tob2 is (344 aa)
initn: 311 init1: 311 opt: 336 Z-score: 438.6 bits: 88.5 E(85289): 1.1e-17
Smith-Waterman score: 336; 39.2% identity (73.6% similar) in 125 aa overlap (9-133:1-121)
10 20 30 40 50 60
pF1KB8 MSHGKGTDMLPEIAAAVGFLSSLLRTRGCVSEQRLKVFSGALQEALTEHYKHHWFPEKPS
: :: .:..:. : : .. . ..: .:. :.. : ..:. ::.::::
XP_016 MQLEIKVALNFIISYLYNK--LPRRRADLFGEELERLLKKKYEGHWYPEKPL
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 KGSGYRCIRINHKMDPIISRVASQIGLSQPQLHQLLPSELTLWVDPYEVSYRIGEDGSIC
::::.::..:.. .::.. .:.. ::. ... .: ::..:.::.::::.::: :..
XP_016 KGSGFRCVHIGEMVDPVVELAAKRSGLAVEDVRANVPEELSVWIDPFEVSYQIGEKGAVK
60 70 80 90 100 110
130 140 150
pF1KB8 VLYEEAPLAASCGLLTCKNQVLLGRSSPSKNYVMAVSS
::: . . .::
XP_016 VLYLDD--SEGCGAPELDKEIKSSFNPDAQVFVPIGSQDSSLSNSPSPSFGQSPSPTFIP
120 130 140 150 160
>>XP_005261372 (OMIM: 607396) PREDICTED: protein Tob2 is (344 aa)
initn: 311 init1: 311 opt: 336 Z-score: 438.6 bits: 88.5 E(85289): 1.1e-17
Smith-Waterman score: 336; 39.2% identity (73.6% similar) in 125 aa overlap (9-133:1-121)
10 20 30 40 50 60
pF1KB8 MSHGKGTDMLPEIAAAVGFLSSLLRTRGCVSEQRLKVFSGALQEALTEHYKHHWFPEKPS
: :: .:..:. : : .. . ..: .:. :.. : ..:. ::.::::
XP_005 MQLEIKVALNFIISYLYNK--LPRRRADLFGEELERLLKKKYEGHWYPEKPL
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 KGSGYRCIRINHKMDPIISRVASQIGLSQPQLHQLLPSELTLWVDPYEVSYRIGEDGSIC
::::.::..:.. .::.. .:.. ::. ... .: ::..:.::.::::.::: :..
XP_005 KGSGFRCVHIGEMVDPVVELAAKRSGLAVEDVRANVPEELSVWIDPFEVSYQIGEKGAVK
60 70 80 90 100 110
130 140 150
pF1KB8 VLYEEAPLAASCGLLTCKNQVLLGRSSPSKNYVMAVSS
::: . . .::
XP_005 VLYLDD--SEGCGAPELDKEIKSSFNPDAQVFVPIGSQDSSLSNSPSPSFGQSPSPTFIP
120 130 140 150 160
>>XP_006724168 (OMIM: 607396) PREDICTED: protein Tob2 is (344 aa)
initn: 311 init1: 311 opt: 336 Z-score: 438.6 bits: 88.5 E(85289): 1.1e-17
Smith-Waterman score: 336; 39.2% identity (73.6% similar) in 125 aa overlap (9-133:1-121)
10 20 30 40 50 60
pF1KB8 MSHGKGTDMLPEIAAAVGFLSSLLRTRGCVSEQRLKVFSGALQEALTEHYKHHWFPEKPS
: :: .:..:. : : .. . ..: .:. :.. : ..:. ::.::::
XP_006 MQLEIKVALNFIISYLYNK--LPRRRADLFGEELERLLKKKYEGHWYPEKPL
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 KGSGYRCIRINHKMDPIISRVASQIGLSQPQLHQLLPSELTLWVDPYEVSYRIGEDGSIC
::::.::..:.. .::.. .:.. ::. ... .: ::..:.::.::::.::: :..
XP_006 KGSGFRCVHIGEMVDPVVELAAKRSGLAVEDVRANVPEELSVWIDPFEVSYQIGEKGAVK
60 70 80 90 100 110
130 140 150
pF1KB8 VLYEEAPLAASCGLLTCKNQVLLGRSSPSKNYVMAVSS
::: . . .::
XP_006 VLYLDD--SEGCGAPELDKEIKSSFNPDAQVFVPIGSQDSSLSNSPSPSFGQSPSPTFIP
120 130 140 150 160
>>NP_006797 (OMIM: 605674) protein BTG3 isoform b [Homo (252 aa)
initn: 255 init1: 255 opt: 291 Z-score: 382.5 bits: 77.6 E(85289): 1.5e-14
Smith-Waterman score: 291; 41.4% identity (69.0% similar) in 116 aa overlap (9-122:1-114)
10 20 30 40 50 60
pF1KB8 MSHGKGTDMLPEIAAAVGFLSSLLRTRGCVSEQRLKVFSGALQEALTEHYKHHWFPEKPS
: ::::.: :.. :.: . .... .. :. : : :.::.::.:::::
NP_006 MKNEIAAVVFFFTRLVRKHDKLKKEAVERFAEKLTLILQEKYKNHWYPEKPS
10 20 30 40 50
70 80 90 100 110
pF1KB8 KGSGYRCIRIN--HKMDPIISRVASQIGLSQPQLHQLLPSELTLWVDPYEVSYRIGEDGS
::..:::::.: ...:: . .. . . .: ::.:::::::: :: : :: ..
NP_006 KGQAYRCIRVNKFQRVDPDVLKACENSCILYSDLG--LPKELTLWVDPCEVCCRYGEKNN
60 70 80 90 100 110
120 130 140 150
pF1KB8 ICVLYEEAPLAASCGLLTCKNQVLLGRSSPSKNYVMAVSS
..
NP_006 AFIVASFENKDENKDEISRKVTRALDKVTSDYHSGSSSSDEETSKEMEVKPSSVTAAASP
120 130 140 150 160 170
>>XP_016883755 (OMIM: 605674) PREDICTED: protein BTG3 is (252 aa)
initn: 255 init1: 255 opt: 291 Z-score: 382.5 bits: 77.6 E(85289): 1.5e-14
Smith-Waterman score: 291; 41.4% identity (69.0% similar) in 116 aa overlap (9-122:1-114)
10 20 30 40 50 60
pF1KB8 MSHGKGTDMLPEIAAAVGFLSSLLRTRGCVSEQRLKVFSGALQEALTEHYKHHWFPEKPS
: ::::.: :.. :.: . .... .. :. : : :.::.::.:::::
XP_016 MKNEIAAVVFFFTRLVRKHDKLKKEAVERFAEKLTLILQEKYKNHWYPEKPS
10 20 30 40 50
70 80 90 100 110
pF1KB8 KGSGYRCIRIN--HKMDPIISRVASQIGLSQPQLHQLLPSELTLWVDPYEVSYRIGEDGS
::..:::::.: ...:: . .. . . .: ::.:::::::: :: : :: ..
XP_016 KGQAYRCIRVNKFQRVDPDVLKACENSCILYSDLG--LPKELTLWVDPCEVCCRYGEKNN
60 70 80 90 100 110
120 130 140 150
pF1KB8 ICVLYEEAPLAASCGLLTCKNQVLLGRSSPSKNYVMAVSS
..
XP_016 AFIVASFENKDENKDEISRKVTRALDKVTSDYHSGSSSSDEETSKEMEVKPSSVTAAASP
120 130 140 150 160 170
158 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 00:45:24 2016 done: Sat Nov 5 00:45:25 2016
Total Scan time: 4.980 Total Display time: -0.040
Function used was FASTA [36.3.4 Apr, 2011]