FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB8910, 208 aa 1>>>pF1KB8910 208 - 208 aa - 208 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6158+/-0.000731; mu= 11.6121+/- 0.044 mean_var=66.4172+/-13.211, 0's: 0 Z-trim(109.1): 33 B-trim: 57 in 1/50 Lambda= 0.157374 statistics sampled from 10594 (10623) to 10594 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.717), E-opt: 0.2 (0.326), width: 16 Scan time: 2.230 The best scores are: opt bits E(32554) CCDS8196.1 FADD gene_id:8772|Hs108|chr11 ( 208) 1347 314.2 3.6e-86 >>CCDS8196.1 FADD gene_id:8772|Hs108|chr11 (208 aa) initn: 1347 init1: 1347 opt: 1347 Z-score: 1660.5 bits: 314.2 E(32554): 3.6e-86 Smith-Waterman score: 1347; 100.0% identity (100.0% similar) in 208 aa overlap (1-208:1-208) 10 20 30 40 50 60 pF1KB8 MDPFLVLLHSVSSSLSSSELTELKFLCLGRVGKRKLERVQSGLDLFSMLLEQNDLEPGHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 MDPFLVLLHSVSSSLSSSELTELKFLCLGRVGKRKLERVQSGLDLFSMLLEQNDLEPGHT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 ELLRELLASLRRHDLLRRVDDFEAGAAAGAAPGEEDLCAAFNVICDNVGKDWRRLARQLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 ELLRELLASLRRHDLLRRVDDFEAGAAAGAAPGEEDLCAAFNVICDNVGKDWRRLARQLK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB8 VSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 VSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEV 130 140 150 160 170 180 190 200 pF1KB8 QQARDLQNRSGAMSPMSWNSDASTSEAS :::::::::::::::::::::::::::: CCDS81 QQARDLQNRSGAMSPMSWNSDASTSEAS 190 200 208 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 20:00:35 2016 done: Sat Nov 5 20:00:35 2016 Total Scan time: 2.230 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]