Result of FASTA (ccds) for
pF1KB9022
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9022, 1712 aa
1>>>pF1KB9022 1712 - 1712 aa - 1712 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 12.7417+/-0.0015; mu= -6.4436+/- 0.091
mean_var=563.2373+/-115.222, 0's: 0 Z-trim(113.1): 217 B-trim: 0 in 0/52
Lambda= 0.054042
statistics sampled from 13577 (13786) to 13577 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.679), E-opt: 0.2 (0.423), width: 16
Scan time: 6.720
The best scores are: opt bits E(32554)
CCDS41907.1 COL4A2 gene_id:1284|Hs108|chr13 (1712) 12760 1011.5 0
CCDS76010.1 COL4A6 gene_id:1288|Hs108|chrX (1707) 5864 473.9 2.2e-132
CCDS14542.1 COL4A6 gene_id:1288|Hs108|chrX (1690) 5194 421.6 1.1e-116
CCDS14541.1 COL4A6 gene_id:1288|Hs108|chrX (1691) 5194 421.6 1.1e-116
CCDS9511.1 COL4A1 gene_id:1282|Hs108|chr13 (1669) 4883 397.4 2.3e-109
CCDS76009.1 COL4A6 gene_id:1288|Hs108|chrX (1666) 4707 383.6 3e-105
CCDS42828.1 COL4A4 gene_id:1286|Hs108|chr2 (1690) 4629 377.6 2.1e-103
CCDS76008.1 COL4A6 gene_id:1288|Hs108|chrX (1633) 4446 363.3 4e-99
CCDS2773.1 COL7A1 gene_id:1294|Hs108|chr3 (2944) 3188 265.5 2e-69
CCDS42829.1 COL4A3 gene_id:1285|Hs108|chr2 (1670) 3122 260.1 4.8e-68
CCDS2297.1 COL3A1 gene_id:1281|Hs108|chr2 (1466) 2870 240.4 3.6e-62
CCDS33350.1 COL5A2 gene_id:1290|Hs108|chr2 (1499) 2855 239.2 8.3e-62
CCDS43452.1 COL11A2 gene_id:1302|Hs108|chr6 (1650) 2815 236.1 7.7e-61
CCDS780.2 COL11A1 gene_id:1301|Hs108|chr1 (1690) 2814 236.1 8.2e-61
CCDS53348.1 COL11A1 gene_id:1301|Hs108|chr1 (1767) 2814 236.1 8.5e-61
CCDS778.1 COL11A1 gene_id:1301|Hs108|chr1 (1806) 2814 236.1 8.6e-61
CCDS11561.1 COL1A1 gene_id:1277|Hs108|chr17 (1464) 2750 231.0 2.4e-59
CCDS12222.1 COL5A3 gene_id:50509|Hs108|chr19 (1745) 2743 230.5 3.9e-59
CCDS8759.1 COL2A1 gene_id:1280|Hs108|chr12 (1418) 2694 226.6 4.8e-58
CCDS41778.1 COL2A1 gene_id:1280|Hs108|chr12 (1487) 2694 226.6 4.9e-58
CCDS6376.1 COL22A1 gene_id:169044|Hs108|chr8 (1626) 2686 226.1 8.1e-58
CCDS6982.1 COL5A1 gene_id:1289|Hs108|chr9 (1838) 2651 223.4 5.8e-57
CCDS75932.1 COL5A1 gene_id:1289|Hs108|chr9 (1838) 2651 223.4 5.8e-57
CCDS6802.1 COL27A1 gene_id:85301|Hs108|chr9 (1860) 2593 218.9 1.4e-55
CCDS35366.1 COL4A5 gene_id:1287|Hs108|chrX (1691) 2582 218.0 2.3e-55
CCDS14543.1 COL4A5 gene_id:1287|Hs108|chrX (1685) 2571 217.1 4.1e-55
CCDS41353.1 COL24A1 gene_id:255631|Hs108|chr1 (1714) 2521 213.2 6.3e-54
CCDS41297.1 COL16A1 gene_id:1307|Hs108|chr1 (1604) 2287 194.9 1.9e-48
CCDS4970.1 COL19A1 gene_id:1310|Hs108|chr6 (1142) 1777 155.0 1.4e-36
CCDS4971.1 COL9A1 gene_id:1297|Hs108|chr6 ( 921) 1677 147.1 2.6e-34
CCDS47447.1 COL9A1 gene_id:1297|Hs108|chr6 ( 678) 1670 146.4 3.1e-34
CCDS42972.1 COL18A1 gene_id:80781|Hs108|chr21 (1519) 1628 143.5 5.2e-33
CCDS13505.1 COL9A3 gene_id:1299|Hs108|chr20 ( 684) 1607 141.5 9.4e-33
CCDS42971.1 COL18A1 gene_id:80781|Hs108|chr21 (1339) 1584 140.0 5.2e-32
CCDS77643.1 COL18A1 gene_id:80781|Hs108|chr21 (1754) 1582 140.0 6.9e-32
CCDS450.1 COL9A2 gene_id:1298|Hs108|chr1 ( 689) 1556 137.6 1.5e-31
CCDS403.1 COL8A2 gene_id:1296|Hs108|chr1 ( 703) 1448 129.2 5.2e-29
CCDS72756.1 COL8A2 gene_id:1296|Hs108|chr1 ( 638) 1415 126.5 2.9e-28
CCDS44423.2 COL13A1 gene_id:1305|Hs108|chr10 ( 668) 1401 125.5 6.3e-28
CCDS55025.1 COL21A1 gene_id:81578|Hs108|chr6 ( 957) 1388 124.6 1.6e-27
CCDS83099.1 COL21A1 gene_id:81578|Hs108|chr6 ( 954) 1380 124.0 2.5e-27
CCDS58922.1 COL25A1 gene_id:84570|Hs108|chr4 ( 645) 1329 119.8 3e-26
CCDS7554.1 COL17A1 gene_id:1308|Hs108|chr10 (1497) 1315 119.1 1.2e-25
CCDS2934.1 COL8A1 gene_id:1295|Hs108|chr3 ( 744) 1300 117.6 1.6e-25
CCDS44428.2 COL13A1 gene_id:1305|Hs108|chr10 ( 610) 1281 116.1 3.9e-25
CCDS5105.1 COL10A1 gene_id:1300|Hs108|chr6 ( 680) 1281 116.1 4.2e-25
CCDS44425.2 COL13A1 gene_id:1305|Hs108|chr10 ( 686) 1256 114.2 1.6e-24
CCDS76649.1 COL4A1 gene_id:1282|Hs108|chr13 ( 519) 1246 113.3 2.3e-24
CCDS44424.2 COL13A1 gene_id:1305|Hs108|chr10 ( 695) 1224 111.7 9.3e-24
CCDS34682.1 COL1A2 gene_id:1278|Hs108|chr7 (1366) 1202 110.3 4.8e-23
>>CCDS41907.1 COL4A2 gene_id:1284|Hs108|chr13 (1712 aa)
initn: 12760 init1: 12760 opt: 12760 Z-score: 5396.0 bits: 1011.5 E(32554): 0
Smith-Waterman score: 12760; 99.9% identity (100.0% similar) in 1712 aa overlap (1-1712:1-1712)
10 20 30 40 50 60
pF1KB9 MGRDQRAVAGPALRRWLLLGTVTVGFLAQSVLAGVKKFDVPCGGRDCSGGCQCYPEKGGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 MGRDQRAVAGPALRRWLLLGTVTVGFLAQSVLAGVKKFDVPCGGRDCSGGCQCYPEKGGR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 GQPGPVGPQGYNGPPGLQGFPGLQGRKGDKGERGAPGVTGPKGDVGARGVSGFPGADGIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GQPGPVGPQGYNGPPGLQGFPGLQGRKGDKGERGAPGVTGPKGDVGARGVSGFPGADGIP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 GHPGQGGPRGRPGYDGCNGTQGDSGPQGPPGSEGFTGPPGPQGPKGQKGEPYALPKEERD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GHPGQGGPRGRPGYDGCNGTQGDSGPQGPPGSEGFTGPPGPQGPKGQKGEPYALPKEERD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 RYRGEPGEPGLVGFQGPPGRPGHVGQMGPVGAPGRPGPPGPPGPKGQQGNRGLGFYGVKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 RYRGEPGEPGLVGFQGPPGRPGHVGQMGPVGAPGRPGPPGPPGPKGQQGNRGLGFYGVKG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 EKGDVGQPGPNGIPSDTLHPIIAPTGVTFHPDQYKGEKGSEGEPGIRGISLKGEEGIMGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 EKGDVGQPGPNGIPSDTLHPIIAPTGVTFHPDQYKGEKGSEGEPGIRGISLKGEEGIMGF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 PGLRGYPGLSGEKGSPGQKGSRGLDGYQGPDGPRGPKGEAGDPGPPGLPAYSPHPSLAKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 PGLRGYPGLSGEKGSPGQKGSRGLDGYQGPDGPRGPKGEAGDPGPPGLPAYSPHPSLAKG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 ARGDPGFPGAQGEPGSQGEPGDPGLPGPPGLSIGDGDQRRGLPGEMGPKGFIGDPGIPAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 ARGDPGFPGAQGEPGSQGEPGDPGLPGPPGLSIGDGDQRRGLPGEMGPKGFIGDPGIPAL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 YGGPPGPDGKRGPPGPPGLPGPPGPDGFLFGLKGAKGRAGFPGLPGSPGARGPKGWKGDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 YGGPPGPDGKRGPPGPPGLPGPPGPDGFLFGLKGAKGRAGFPGLPGSPGARGPKGWKGDA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 GECRCTEGDEAIKGLPGLPGPKGFAGINGEPGRKGDKGDPGQHGLPGFPGLKGVPGNIGA
::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::
CCDS41 GECRCTEGDEAIKGLPGLPGPKGFAGINGEPGRKGDRGDPGQHGLPGFPGLKGVPGNIGA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 PGPKGAKGDSRTITTKGERGQPGVPGVPGMKGDDGSPGRDGLDGFPGLPGPPGDGIKGPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 PGPKGAKGDSRTITTKGERGQPGVPGVPGMKGDDGSPGRDGLDGFPGLPGPPGDGIKGPP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB9 GDPGYPGIPGTKGTPGEMGPPGLGLPGLKGQRGFPGDAGLPGPPGFLGPPGPAGTPGQID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GDPGYPGIPGTKGTPGEMGPPGLGLPGLKGQRGFPGDAGLPGPPGFLGPPGPAGTPGQID
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB9 CDTDVKRAVGGDRQEAIQPGCIAGPKGLPGLPGPPGPTGAKGLRGIPGFAGADGGPGPRG
::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::
CCDS41 CDTDVKRAVGGDRQEAIQPGCIGGPKGLPGLPGPPGPTGAKGLRGIPGFAGADGGPGPRG
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB9 LPGDAGREGFPGPPGFIGPRGSKGAVGLPGPDGSPGPIGLPGPDGPPGERGLPGEVLGAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 LPGDAGREGFPGPPGFIGPRGSKGAVGLPGPDGSPGPIGLPGPDGPPGERGLPGEVLGAQ
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB9 PGPRGDAGVPGQPGLKGLPGDRGPPGFRGSQGMPGMPGLKGQPGLPGPSGQPGLYGPPGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 PGPRGDAGVPGQPGLKGLPGDRGPPGFRGSQGMPGMPGLKGQPGLPGPSGQPGLYGPPGL
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB9 HGFPGAPGQEGPLGLPGIPGREGLPGDRGDPGDTGAPGPVGMKGLSGDRGDAGFTGEQGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 HGFPGAPGQEGPLGLPGIPGREGLPGDRGDPGDTGAPGPVGMKGLSGDRGDAGFTGEQGH
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB9 PGSPGFKGIDGMPGTPGLKGDRGSPGMDGFQGMPGLKGRPGFPGSKGEAGFFGIPGLKGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 PGSPGFKGIDGMPGTPGLKGDRGSPGMDGFQGMPGLKGRPGFPGSKGEAGFFGIPGLKGL
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB9 AGEPGFKGSRGDPGPPGPPPVILPGMKDIKGEKGDEGPMGLKGYLGAKGIQGMPGIPGLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 AGEPGFKGSRGDPGPPGPPPVILPGMKDIKGEKGDEGPMGLKGYLGAKGIQGMPGIPGLS
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB9 GIPGLPGRPGHIKGVKGDIGVPGIPGLPGFPGVAGPPGITGFPGFIGSRGDKGAPGRAGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GIPGLPGRPGHIKGVKGDIGVPGIPGLPGFPGVAGPPGITGFPGFIGSRGDKGAPGRAGL
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB9 YGEIGATGDFGDIGDTINLPGRPGLKGERGTTGIPGLKGFFGEKGTEGDIGFPGITGVTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 YGEIGATGDFGDIGDTINLPGRPGLKGERGTTGIPGLKGFFGEKGTEGDIGFPGITGVTG
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KB9 VQGPPGLKGQTGFPGLTGPPGSQGELGRIGLPGGKGDDGWPGAPGLPGFPGLRGIRGLHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 VQGPPGLKGQTGFPGLTGPPGSQGELGRIGLPGGKGDDGWPGAPGLPGFPGLRGIRGLHG
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KB9 LPGTKGFPGSPGSDIHGDPGFPGPPGERGDPGEANTLPGPVGVPGQKGDQGAPGERGPPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 LPGTKGFPGSPGSDIHGDPGFPGPPGERGDPGEANTLPGPVGVPGQKGDQGAPGERGPPG
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KB9 SPGLQGFPGITPPSNISGAPGDKGAPGIFGLKGYRGPPGPPGSAALPGSKGDTGNPGAPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SPGLQGFPGITPPSNISGAPGDKGAPGIFGLKGYRGPPGPPGSAALPGSKGDTGNPGAPG
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KB9 TPGTKGWAGDSGPQGRPGVFGLPGEKGPRGEQGFMGNTGPTGAVGDRGPKGPKGDPGFPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 TPGTKGWAGDSGPQGRPGVFGLPGEKGPRGEQGFMGNTGPTGAVGDRGPKGPKGDPGFPG
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KB9 APGTVGAPGIAGIPQKIAVQPGTVGPQGRRGPPGAPGEMGPQGPPGEPGFRGAPGKAGPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 APGTVGAPGIAGIPQKIAVQPGTVGPQGRRGPPGAPGEMGPQGPPGEPGFRGAPGKAGPQ
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KB9 GRGGVSAVPGFRGDEGPIGHQGPIGQEGAPGRPGSPGLPGMPGRSVSIGYLLVKHSQTDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GRGGVSAVPGFRGDEGPIGHQGPIGQEGAPGRPGSPGLPGMPGRSVSIGYLLVKHSQTDQ
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KB9 EPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 EPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASR
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KB9 NDKSYWLSTTAPLPMMPVAEDEIKPYISRCSVCEAPAIAIAVHSQDVSIPHCPAGWRSLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 NDKSYWLSTTAPLPMMPVAEDEIKPYISRCSVCEAPAIAIAVHSQDVSIPHCPAGWRSLW
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KB9 IGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYYANKYSFWLTTIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 IGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYYANKYSFWLTTIP
1630 1640 1650 1660 1670 1680
1690 1700 1710
pF1KB9 EQSFQGSPSADTLKAGLIRTHISRCQVCMKNL
::::::::::::::::::::::::::::::::
CCDS41 EQSFQGSPSADTLKAGLIRTHISRCQVCMKNL
1690 1700 1710
>>CCDS76010.1 COL4A6 gene_id:1288|Hs108|chrX (1707 aa)
initn: 6777 init1: 2681 opt: 5864 Z-score: 2490.3 bits: 473.9 E(32554): 2.2e-132
Smith-Waterman score: 5865; 51.8% identity (65.2% similar) in 1752 aa overlap (11-1712:3-1707)
10 20 30 40 50 60
pF1KB9 MGRDQRAVAGPALRRWLLLGTVTVGFLAQSVLAGVKKFDVPCGGRDCSGGCQCYPEKGGR
:.: :::: ::. . . . :: :.. ::::.::::.:::.::::.:
CCDS76 MHPGL--WLLL--VTLCLTEELAAAGEKSYGKPCGGQDCSGSCQCFPEKGAR
10 20 30 40
70 80 90 100 110 120
pF1KB9 GQPGPVGPQGYNGPPGLQGFPGLQGRKGDKGERGAPGVTGPKGDVGARGVSGFPGADGIP
:.:::.: :: .:: :. : ::.: ::..: : : ::::: : :: :: : .:::
CCDS76 GRPGPIGIQGPTGPQGFTGSTGLSGLKGERGFPGLLGPYGPKGDKGPMGVPGFLGINGIP
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB9 GHPGQGGPRGRPGYDGCNGTQGDSGPQGPPGSEGFTGPPGPQGPKGQKGEPYALPKEERD
::::: :::: :: :::::::: : :: : :. :::: : ::.::.: : .
CCDS76 GHPGQPGPRGPPGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPVLAPGSFKG
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB9 RYRGEPGEPGLVGFQGPPGRPGHVGQMGPVGAPGRPGPPGPPGPKGQQGNRGLGFYGVKG
..:.:: ::: :. :: : :: : .::.: :: :::::::: : .:: :::: : ::
CCDS76 -MKGDPGLPGLDGITGPQGAPGFPGAVGPAGPPGLQGPPGPPGPLGPDGNMGLGFQGEKG
170 180 190 200 210 220
250 260 270 280
pF1KB9 EKGDVGQPGPNGIPSDT--LHPIIAPTGVTFHPDQYKGEKGSEGEPGIRGI---------
::::: ::: : : .: :. . : : ::: : .: ::: :
CCDS76 VKGDVGLPGPAGPPPSTGELEFMGFPKG----KKGSKGEPGPKGFPGISGPPGFPGLGTT
230 240 250 260 270 280
290 300 310 320 330 340
pF1KB9 ---SLKGEEGIMGFPGLRGYPGLSGEKGSPGQKGSRGLDGYQGPDGPRGPKGEAGDPGPP
. :::.:: :.:: :: : : .: :::.:..: :. : .: .: .:. :: : :
CCDS76 GEKGEKGEKGIPGLPGPRGPMGSEGVQGPPGQQGKKGTLGFPGLNGFQGIEGQKGDIGLP
290 300 310 320 330 340
350 360 370 380 390 400
pF1KB9 GLPAY-SPHPSLAKGARGDPG---FPGAQGEPGSQGEPGDPGLPGPPGLSIGDGDQRRGL
: .. . .. .: :::: .:: .:. : :: : :.:: :.:: :.
CCDS76 GPDVFIDIDGAVISGNPGDPGVPGLPGLKGDEGIQGLRGPSGVPGLPALS--------GV
350 360 370 380 390
410 420 430 440 450
pF1KB9 PGEMGPKGFIG---DPGIPALYG-GPPGPDGKRGPPGPPGLPGPPGPDGFLFGLKGAKGR
:: .::.:: : : : :. : : :. : ::::: ::::.:. :.. .
CCDS76 PGALGPQGFPGLKGDQGNPGRTTIGAAGLPGRDGLPGPPGPPGPPSPEFETETLHNKE--
400 410 420 430 440 450
460 470 480 490 500 510
pF1KB9 AGFPGLPGSPGARGP---KGWKGDAGECRCTEGDEAIKGLPGLPGPKGFAGINGEPGRKG
.::::: : : .: :: :::.: : : .: : :: ::: : :. : :: ::
CCDS76 SGFPGLRGEQGPKGNLGLKGIKGDSGFCAC-DGGVPNTGPPGEPGPPGPWGLIGLPGLKG
460 470 480 490 500 510
520 530 540 550 560 570
pF1KB9 DKGDPGQHGLPGFPGLKGVPGNIGAPGPKGAKGDSRTITTKGERGQPGVPGVPGMKGDDG
.:: :. : : : :. : .: :::: ::. : .: :. : : :..: :
CCDS76 ARGDRGSGGAQGPAGAPGLVGPLGPSGPKGKKGEPILSTIQGMPGDRGDSGSQGFRGVIG
520 530 540 550 560 570
580 590 600 610 620 630
pF1KB9 SPGRDGLDGFPGLPGPPGDGIKGPPGDPGYPGIPGTKGTPGEMGPPGLGLPGLKGQRGFP
::.::. :.::::: :::: .: ::. : ::.:: :: :: : :: ::::: : ::.:
CCDS76 EPGKDGVPGLPGLPGLPGDGGQGFPGEKGLPGLPGEKGHPGPPGLPGNGLPGLPGPRGLP
580 590 600 610 620 630
640 650 660 670 680
pF1KB9 GDAGLPGPPGFLGPPGPAGTPGQIDCDTDVKRAVG-GD--RQEAIQPGCIA----GPKGL
:: : : :: : :: : :: : :: :: ...: :: ::.:.
CCDS76 GDKGKDGLPGQQGLPGSKG-----DC---CCREVGKGDLDTERGITLPCIIPGSYGPSGF
640 650 660 670 680
690 700 710 720 730 740
pF1KB9 PGLPGPPGPTGAKGLRGIPGFAGADGGPGPRGLPGDAGREGFPGPPGFIGPRGSKGAVG-
:: :: ::: :: ::.:: : :. : .: ::. : .: ::: :::: :: :
CCDS76 PGTPGFPGP---KGSRGLPGTPGQPGSSGSKGEPGSPGLVHLPELPGFPGPRGEKGLPGF
690 700 710 720 730 740
750 760 770 780 790 800
pF1KB9 --LPGPDGSPGPIGLPGPDGPPGERGLPGEVLGAQPGPRGDAGVPGQPGLKGLPGDRGPP
::: :: :: :: :: :: .: :...::. : :. :. : : ::. :: : :
CCDS76 PGLPGKDGLPGMIGSPGL---PGSKGATGDIFGAENGAPGEQGLQGLTGHKGFLGDSGLP
750 760 770 780 790
810 820 830 840 850 860
pF1KB9 GFRGSQGMPGMPGLKGQPGLPGPSGQPGLYGPPGLHGFPGAPGQEGPLGLPGIPGREGLP
:..: .: ::. : ::. : :: :: : : :: : : :. : : ::.:: : :
CCDS76 GLKGVHGKPGLLGPKGERGSPGTPGQVGQPGTPGSSGPYGIKGKSGLPGAPGFPGISGHP
800 810 820 830 840 850
870 880 890 900 910 920
pF1KB9 GDRGDPGDTGAPGPVGMKGLSGDRGDAGFTGEQGHPGSPGFKGIDGMPGTPGLKGDRGSP
: .: : : :: . ::: : .: : : : :::: :. :.:. : ::..::
CCDS76 GKKGTRGKKGPPGSIVKKGLPGLKGLPGNPGLVGLKGSPGSPGVAGLPALSGPKGEKGSV
860 870 880 890 900 910
930 940 950 960 970 980
pF1KB9 GMDGFQGMPGLKGRPGFPGSKGEAGFFGIPGLKGLAGEPGFKGSRGDPGPPGPPPVILPG
:. :: :.::: : :: : :: : : : .: :: :: ::.::.::: : : :
CCDS76 GFVGFPGIPGLPGIPGTRGLKGIPGSTGKMGPSGRAGTPGEKGDRGNPGPVGIPSPRRP-
920 930 940 950 960 970
990 1000 1010 1020 1030 1040
pF1KB9 MKDI--KGEKGDEGPMGLKGYLGAKGIQGMPGIPGLSGIPGLPGRPGHIKGVKGDIGVPG
:... ::.::..: : .:. : .: .: : :: :.:: :: :: ::::.: : ::
CCDS76 MSNLWLKGDKGSQGSAGSNGFPGPRGDKGEAGRPGPPGLPGAPGLPGIIKGVSGKPGPPG
980 990 1000 1010 1020 1030
1050 1060 1070 1080 1090 1100
pF1KB9 IPGLPGFPGVAGPPGITGFPGFIGSRGDKGAPGRAGLYGEIGATGDFGDIGDTINLPGRP
. :. :.::. : :::::::. : :..: : :: : : : :: :.:... : :
CCDS76 FMGIRGLPGLKGSSGITGFPGMPGESGSQGIRGSPGLPGASGLPGLKGDNGQTVEISGSP
1040 1050 1060 1070 1080 1090
1110 1120 1130 1140 1150 1160
pF1KB9 GLKGERGTTGIPGLKGFFGEKGTEGDIGFPGITGVTGVQGPPGLKGQTGFPGLTGPPGSQ
: ::. : .:. : :: . : :.::::: : .: :..:..:.:: : ::
CCDS76 GPKGQPGESGFKGTKG---RDGLIGNIGFPGNK---GEDGKVGVSGDVGLPGAPGFPGVA
1100 1110 1120 1130 1140 1150
1170 1180 1190 1200 1210
pF1KB9 GELGRIGLPGGKGDDGW--P-GAPGL--P-GFPGLRGIRGLHGLPGTKGFPGSPGSDIHG
: :. ::::..: .: : :.::: : ::::. :..::.::::::: :.:: .: :
CCDS76 GMRGEPGLPGSSGHQGAIGPLGSPGLIGPKGFPGFPGLHGLNGLPGTKGTHGTPGPSITG
1160 1170 1180 1190 1200 1210
1220 1230 1240 1250 1260 1270
pF1KB9 DPG---FPGPPGERGDPGEANTLPGPVGVPGQKGDQGAPGERGPPGSPGLQGFPGITPPS
:: .::: ::.: :: . :: :. :::::.: :: .:: : :: :::. ::
CCDS76 VPGPAGLPGPKGEKGYPGIGIGAPGKPGLRGQKGDRGFPGLQGPAGLPGA---PGISLPS
1220 1230 1240 1250 1260
1280 1290 1300 1310 1320 1330
pF1KB9 NISGAPGDKGAPGIFGLKGYRGPPGPPGSAALPGSKGDTGNPGAPGTPGTKGWAGDSGPQ
:.: ::: : ::. : .: :: :::: . ...::::.:: :: :: :: :: :
CCDS76 LIAGQPGDPGRPGLDGERGRPGPAGPPGPPGPSSNQGDTGDPGFPGIPGPKGPKGD---Q
1270 1280 1290 1300 1310 1320
1340 1350 1360 1370 1380 1390
pF1KB9 GRPGVFGLPGE---KGPRGEQGFMGNTGPTGAVGDRGPKGPKGDPGFPGAPGTVGAPGIA
: :: ::::: :: ::: ::::. : .: :: : : :: : :. : : :: .
CCDS76 GIPGFSGLPGELGLKGMRGEPGFMGTPGKVGPPGDPGFPGMKGKAGPRGSSGLQGDPGQT
1330 1340 1350 1360 1370 1380
1400 1410 1420 1430 1440 1450
pF1KB9 GIPQKIAVQPGTVGPQGRRGPPGAPGEMGPQGPPGEPGFRGAPGKAGPQGRGGVSAVPGF
. . : :: .: : : :: :. : ::: : : .: :: : .: .:. . ::
CCDS76 PTAEAVQVPPGPLGLPGIDGIPGLTGDPGAQGPVGLQGSKGLPGIPGKDGPSGLPGPPGA
1390 1400 1410 1420 1430 1440
1460 1470 1480 1490 1500 1510
pF1KB9 RGDEGPIGHQGPIGQEGAPGRPGSPGLPGMPGRSVSIGYLLVKHSQTDQEPMCPVGMNKL
:: : : ::: : :::::. : :.:::::.:. .:: ::::::..: : ::.::..:
CCDS76 LGDPGLPGLQGPPGFEGAPGQQGPFGMPGMPGQSMRVGYTLVKHSQSEQVPPCPIGMSQL
1450 1460 1470 1480 1490 1500
1520 1530 1540 1550 1560 1570
pF1KB9 WSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASRNDKSYWLSTTA
: :::::. ::::::::::::.::::: :::::::.::: ..::.:: ::::::::::::
CCDS76 WVGYSLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTA
1510 1520 1530 1540 1550 1560
1580 1590 1600 1610 1620 1630
pF1KB9 PLPMMPVAEDEIKPYISRCSVCEAPAIAIAVHSQDVSIPHCPAGWRSLWIGYSFLMHTAA
:.:::::.. .: :::::::::::. ::::::::..::.:: :::::::::::::::::
CCDS76 PIPMMPVSQTQIPQYISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLMHTAA
1570 1580 1590 1600 1610 1620
1640 1650 1660 1670 1680 1690
pF1KB9 GDEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYYANKYSFWLTTIPE-QSFQGSPSA
: :::::::::::::::::::::::::.:.::::::.::::::::::. : :.: : .
CCDS76 GAEGGGQSLVSPGSCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFGELPVS
1630 1640 1650 1660 1670 1680
1700 1710
pF1KB9 DTLKAGLIRTHISRCQVCMKNL
.::::: ..:..::::::::.:
CCDS76 ETLKAGQLHTRVSRCQVCMKSL
1690 1700
>>CCDS14542.1 COL4A6 gene_id:1288|Hs108|chrX (1690 aa)
initn: 5233 init1: 2671 opt: 5194 Z-score: 2208.1 bits: 421.6 E(32554): 1.1e-116
Smith-Waterman score: 5841; 51.7% identity (65.0% similar) in 1745 aa overlap (11-1712:3-1690)
10 20 30 40 50 60
pF1KB9 MGRDQRAVAGPALRRWLLLGTVTVGFLAQSVLAGVKKFDVPCGGRDCSGGCQCYPEKGGR
:.: :::: ::. . . . :: :.. ::::.::::.:::.::::.:
CCDS14 MHPGL--WLLL--VTLCLTEELAAAGEKSYGKPCGGQDCSGSCQCFPEKGAR
10 20 30 40
70 80 90 100 110 120
pF1KB9 GQPGPVGPQGYNGPPGLQGFPGLQGRKGDKGERGAPGVTGPKGDVGARGVSGFPGADGIP
:.:::.: :: .:: :. : ::.: ::..: : : ::::: : :: :: : .:::
CCDS14 GRPGPIGIQGPTGPQGFTGSTGLSGLKGERGFPGLLGPYGPKGDKGPMGVPGFLGINGIP
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB9 GHPGQGGPRGRPGYDGCNGTQGDSGPQGPPGSEGFTGPPGPQGPKGQKGEPYALPKEERD
::::: :::: :: :::::::: : :: : :. :::: : ::.::.: : .
CCDS14 GHPGQPGPRGPPGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPVLAPGSFKG
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB9 RYRGEPGEPGLVGFQGPPGRPGHVGQMGPVGAPGRPGPPGPPGPKGQQGNRGLGFYGVKG
..:.:: ::: :. :: : :: : .::.: :: :::::::: : .:: :::: : ::
CCDS14 -MKGDPGLPGLDGITGPQGAPGFPGAVGPAGPPGLQGPPGPPGPLGPDGNMGLGFQGEKG
170 180 190 200 210 220
250 260 270 280
pF1KB9 EKGDVGQPGPNGIPSDT--LHPIIAPTGVTFHPDQYKGEKGSEGEPGIRGI---------
::::: ::: : : .: :. . : : ::: : .: ::: :
CCDS14 VKGDVGLPGPAGPPPSTGELEFMGFPKG----KKGSKGEPGPKGFPGISGPPGFPGLGTT
230 240 250 260 270 280
290 300 310 320 330 340
pF1KB9 ---SLKGEEGIMGFPGLRGYPGLSGEKGSPGQKGSRGLDGYQGPDGPRGPKGEAGDPGPP
. :::.:: :.:: :: : : .: :::.:..: :. : .: .: .:. :: : :
CCDS14 GEKGEKGEKGIPGLPGPRGPMGSEGVQGPPGQQGKKGTLGFPGLNGFQGIEGQKGDIGLP
290 300 310 320 330 340
350 360 370 380 390 400
pF1KB9 GLPAY-SPHPSLAKGARGDPG---FPGAQGEPGSQGEPGDPGLPGPPGLSIGDGDQRRGL
: .. . .. .: :::: .:: .:. : :: : :.:: :.:: :.
CCDS14 GPDVFIDIDGAVISGNPGDPGVPGLPGLKGDEGIQGLRGPSGVPGLPALS--------GV
350 360 370 380 390
410 420 430 440 450
pF1KB9 PGEMGPKGFIG---DPGIPALYG-GPPGPDGKRGPPGPPGLPGPPGPDGFLFGLKGAKGR
:: .::.:: : : : :. : : :. : ::::: ::::.:. :.. .
CCDS14 PGALGPQGFPGLKGDQGNPGRTTIGAAGLPGRDGLPGPPGPPGPPSPEFETETLHNKE--
400 410 420 430 440 450
460 470 480 490 500 510
pF1KB9 AGFPGLPGSPGARGP---KGWKGDAGECRCTEGDEAIKGLPGLPGPKGFAGINGEPGRKG
.::::: : : .: :: :::.: : : .: : :: ::: : :. : :: ::
CCDS14 SGFPGLRGEQGPKGNLGLKGIKGDSGFCAC-DGGVPNTGPPGEPGPPGPWGLIGLPGLKG
460 470 480 490 500 510
520 530 540 550 560 570
pF1KB9 DKGDPGQHGLPGFPGLKGVPGNIGAPGPKGAKGDSRTITTKGERGQPGVPGVPGMKGDDG
.:: :. : : : :. : .: :::: ::. : .: :. : : :..: :
CCDS14 ARGDRGSGGAQGPAGAPGLVGPLGPSGPKGKKGEPILSTIQGMPGDRGDSGSQGFRGVIG
520 530 540 550 560 570
580 590 600 610 620 630
pF1KB9 SPGRDGLDGFPGLPGPPGDGIKGPPGDPGYPGIPGTKGTPGEMGPPGLGLPGLKGQRGFP
::.::. :.::::: :::: .: ::. : ::.:: :: :: : :: ::::: : ::.:
CCDS14 EPGKDGVPGLPGLPGLPGDGGQGFPGEKGLPGLPGEKGHPGPPGLPGNGLPGLPGPRGLP
580 590 600 610 620 630
640 650 660 670 680 690
pF1KB9 GDAGLPGPPGFLGPPGPAGTPGQIDCDTDVKRAVGGDRQEAIQPGCIAGPKGLPGLPGPP
:: : : :: : :: : . : : :: ::.:.:: :: :
CCDS14 GDKGKDGLPGQQGLPGSKGI--TLPC---------------IIPGSY-GPSGFPGTPGFP
640 650 660 670
700 710 720 730 740 750
pF1KB9 GPTGAKGLRGIPGFAGADGGPGPRGLPGDAGREGFPGPPGFIGPRGSKGAVG---LPGPD
:: :: ::.:: : :. : .: ::. : .: ::: :::: :: : ::: :
CCDS14 GP---KGSRGLPGTPGQPGSSGSKGEPGSPGLVHLPELPGFPGPRGEKGLPGFPGLPGKD
680 690 700 710 720 730
760 770 780 790 800 810
pF1KB9 GSPGPIGLPGPDGPPGERGLPGEVLGAQPGPRGDAGVPGQPGLKGLPGDRGPPGFRGSQG
: :: :: :: :: .: :...::. : :. :. : : ::. :: : ::..: .:
CCDS14 GLPGMIGSPGL---PGSKGATGDIFGAENGAPGEQGLQGLTGHKGFLGDSGLPGLKGVHG
740 750 760 770 780
820 830 840 850 860 870
pF1KB9 MPGMPGLKGQPGLPGPSGQPGLYGPPGLHGFPGAPGQEGPLGLPGIPGREGLPGDRGDPG
::. : ::. : :: :: : : :: : : :. : : ::.:: : :: .: :
CCDS14 KPGLLGPKGERGSPGTPGQVGQPGTPGSSGPYGIKGKSGLPGAPGFPGISGHPGKKGTRG
790 800 810 820 830 840
880 890 900 910 920 930
pF1KB9 DTGAPGPVGMKGLSGDRGDAGFTGEQGHPGSPGFKGIDGMPGTPGLKGDRGSPGMDGFQG
: :: . ::: : .: : : : :::: :. :.:. : ::..:: :. :: :
CCDS14 KKGPPGSIVKKGLPGLKGLPGNPGLVGLKGSPGSPGVAGLPALSGPKGEKGSVGFVGFPG
850 860 870 880 890 900
940 950 960 970 980 990
pF1KB9 MPGLKGRPGFPGSKGEAGFFGIPGLKGLAGEPGFKGSRGDPGPPGPPPVILPGMKDI--K
.::: : :: : :: : : : .: :: :: ::.::.::: : : : :... :
CCDS14 IPGLPGIPGTRGLKGIPGSTGKMGPSGRAGTPGEKGDRGNPGPVGIPSPRRP-MSNLWLK
910 920 930 940 950 960
1000 1010 1020 1030 1040 1050
pF1KB9 GEKGDEGPMGLKGYLGAKGIQGMPGIPGLSGIPGLPGRPGHIKGVKGDIGVPGIPGLPGF
:.::..: : .:. : .: .: : :: :.:: :: :: ::::.: : ::. :. :.
CCDS14 GDKGSQGSAGSNGFPGPRGDKGEAGRPGPPGLPGAPGLPGIIKGVSGKPGPPGFMGIRGL
970 980 990 1000 1010 1020
1060 1070 1080 1090 1100 1110
pF1KB9 PGVAGPPGITGFPGFIGSRGDKGAPGRAGLYGEIGATGDFGDIGDTINLPGRPGLKGERG
::. : :::::::. : :..: : :: : : : :: :.:... : :: ::. :
CCDS14 PGLKGSSGITGFPGMPGESGSQGIRGSPGLPGASGLPGLKGDNGQTVEISGSPGPKGQPG
1030 1040 1050 1060 1070 1080
1120 1130 1140 1150 1160 1170
pF1KB9 TTGIPGLKGFFGEKGTEGDIGFPGITGVTGVQGPPGLKGQTGFPGLTGPPGSQGELGRIG
.:. : :: . : :.::::: : .: :..:..:.:: : :: : :. :
CCDS14 ESGFKGTKG---RDGLIGNIGFPGNK---GEDGKVGVSGDVGLPGAPGFPGVAGMRGEPG
1090 1100 1110 1120 1130 1140
1180 1190 1200 1210 1220
pF1KB9 LPGGKGDDGW--P-GAPGL--P-GFPGLRGIRGLHGLPGTKGFPGSPGSDIHGDPG---F
:::..: .: : :.::: : ::::. :..::.::::::: :.:: .: : :: .
CCDS14 LPGSSGHQGAIGPLGSPGLIGPKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGL
1150 1160 1170 1180 1190 1200
1230 1240 1250 1260 1270 1280
pF1KB9 PGPPGERGDPGEANTLPGPVGVPGQKGDQGAPGERGPPGSPGLQGFPGITPPSNISGAPG
::: ::.: :: . :: :. :::::.: :: .:: : :: :::. :: :.: ::
CCDS14 PGPKGEKGYPGIGIGAPGKPGLRGQKGDRGFPGLQGPAGLPGA---PGISLPSLIAGQPG
1210 1220 1230 1240 1250
1290 1300 1310 1320 1330 1340
pF1KB9 DKGAPGIFGLKGYRGPPGPPGSAALPGSKGDTGNPGAPGTPGTKGWAGDSGPQGRPGVFG
: : ::. : .: :: :::: . ...::::.:: :: :: :: :: :: :: :
CCDS14 DPGRPGLDGERGRPGPAGPPGPPGPSSNQGDTGDPGFPGIPGPKGPKGD---QGIPGFSG
1260 1270 1280 1290 1300 1310
1350 1360 1370 1380 1390
pF1KB9 LPGE---KGPRGEQGFMGNTGPTGAVGDRGPKGPKGDPGFPGAPGTVGAPGIAGIPQKIA
:::: :: ::: ::::. : .: :: : : :: : :. : : :: . . .
CCDS14 LPGELGLKGMRGEPGFMGTPGKVGPPGDPGFPGMKGKAGPRGSSGLQGDPGQTPTAEAVQ
1320 1330 1340 1350 1360 1370
1400 1410 1420 1430 1440 1450
pF1KB9 VQPGTVGPQGRRGPPGAPGEMGPQGPPGEPGFRGAPGKAGPQGRGGVSAVPGFRGDEGPI
: :: .: : : :: :. : ::: : : .: :: : .: .:. . :: :: :
CCDS14 VPPGPLGLPGIDGIPGLTGDPGAQGPVGLQGSKGLPGIPGKDGPSGLPGPPGALGDPGLP
1380 1390 1400 1410 1420 1430
1460 1470 1480 1490 1500 1510
pF1KB9 GHQGPIGQEGAPGRPGSPGLPGMPGRSVSIGYLLVKHSQTDQEPMCPVGMNKLWSGYSLL
: ::: : :::::. : :.:::::.:. .:: ::::::..: : ::.::..:: :::::
CCDS14 GLQGPPGFEGAPGQQGPFGMPGMPGQSMRVGYTLVKHSQSEQVPPCPIGMSQLWVGYSLL
1440 1450 1460 1470 1480 1490
1520 1530 1540 1550 1560 1570
pF1KB9 YFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASRNDKSYWLSTTAPLPMMPV
. ::::::::::::.::::: :::::::.::: ..::.:: :::::::::::::.:::::
CCDS14 FVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMPV
1500 1510 1520 1530 1540 1550
1580 1590 1600 1610 1620 1630
pF1KB9 AEDEIKPYISRCSVCEAPAIAIAVHSQDVSIPHCPAGWRSLWIGYSFLMHTAAGDEGGGQ
.. .: :::::::::::. ::::::::..::.:: :::::::::::::::::: :::::
CCDS14 SQTQIPQYISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQ
1560 1570 1580 1590 1600 1610
1640 1650 1660 1670 1680 1690
pF1KB9 SLVSPGSCLEDFRATPFIECNGGRGTCHYYANKYSFWLTTIPE-QSFQGSPSADTLKAGL
::::::::::::::::::::.:.::::::.::::::::::. : :.: : ..:::::
CCDS14 SLVSPGSCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFGELPVSETLKAGQ
1620 1630 1640 1650 1660 1670
1700 1710
pF1KB9 IRTHISRCQVCMKNL
..:..::::::::.:
CCDS14 LHTRVSRCQVCMKSL
1680 1690
>>CCDS14541.1 COL4A6 gene_id:1288|Hs108|chrX (1691 aa)
initn: 5233 init1: 2671 opt: 5194 Z-score: 2208.1 bits: 421.6 E(32554): 1.1e-116
Smith-Waterman score: 5840; 51.7% identity (65.1% similar) in 1740 aa overlap (16-1712:7-1691)
10 20 30 40 50 60
pF1KB9 MGRDQRAVAGPALRRWLLLGTVTVGFLAQSVLAGVKKFDVPCGGRDCSGGCQCYPEKGGR
:::: ::. . . . :: :.. ::::.::::.:::.::::.:
CCDS14 MLINKLWLLL--VTLCLTEELAAAGEKSYGKPCGGQDCSGSCQCFPEKGAR
10 20 30 40
70 80 90 100 110 120
pF1KB9 GQPGPVGPQGYNGPPGLQGFPGLQGRKGDKGERGAPGVTGPKGDVGARGVSGFPGADGIP
:.:::.: :: .:: :. : ::.: ::..: : : ::::: : :: :: : .:::
CCDS14 GRPGPIGIQGPTGPQGFTGSTGLSGLKGERGFPGLLGPYGPKGDKGPMGVPGFLGINGIP
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB9 GHPGQGGPRGRPGYDGCNGTQGDSGPQGPPGSEGFTGPPGPQGPKGQKGEPYALPKEERD
::::: :::: :: :::::::: : :: : :. :::: : ::.::.: : .
CCDS14 GHPGQPGPRGPPGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPVLAPGSFKG
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB9 RYRGEPGEPGLVGFQGPPGRPGHVGQMGPVGAPGRPGPPGPPGPKGQQGNRGLGFYGVKG
..:.:: ::: :. :: : :: : .::.: :: :::::::: : .:: :::: : ::
CCDS14 -MKGDPGLPGLDGITGPQGAPGFPGAVGPAGPPGLQGPPGPPGPLGPDGNMGLGFQGEKG
170 180 190 200 210 220
250 260 270 280
pF1KB9 EKGDVGQPGPNGIPSDT--LHPIIAPTGVTFHPDQYKGEKGSEGEPGIRGI---------
::::: ::: : : .: :. . : : ::: : .: ::: :
CCDS14 VKGDVGLPGPAGPPPSTGELEFMGFPKG----KKGSKGEPGPKGFPGISGPPGFPGLGTT
230 240 250 260 270 280
290 300 310 320 330 340
pF1KB9 ---SLKGEEGIMGFPGLRGYPGLSGEKGSPGQKGSRGLDGYQGPDGPRGPKGEAGDPGPP
. :::.:: :.:: :: : : .: :::.:..: :. : .: .: .:. :: : :
CCDS14 GEKGEKGEKGIPGLPGPRGPMGSEGVQGPPGQQGKKGTLGFPGLNGFQGIEGQKGDIGLP
290 300 310 320 330 340
350 360 370 380 390 400
pF1KB9 GLPAY-SPHPSLAKGARGDPG---FPGAQGEPGSQGEPGDPGLPGPPGLSIGDGDQRRGL
: .. . .. .: :::: .:: .:. : :: : :.:: :.:: :.
CCDS14 GPDVFIDIDGAVISGNPGDPGVPGLPGLKGDEGIQGLRGPSGVPGLPALS--------GV
350 360 370 380 390
410 420 430 440 450
pF1KB9 PGEMGPKGFIG---DPGIPALYG-GPPGPDGKRGPPGPPGLPGPPGPDGFLFGLKGAKGR
:: .::.:: : : : :. : : :. : ::::: ::::.:. :.. .
CCDS14 PGALGPQGFPGLKGDQGNPGRTTIGAAGLPGRDGLPGPPGPPGPPSPEFETETLHNKE--
400 410 420 430 440 450
460 470 480 490 500 510
pF1KB9 AGFPGLPGSPGARGP---KGWKGDAGECRCTEGDEAIKGLPGLPGPKGFAGINGEPGRKG
.::::: : : .: :: :::.: : : .: : :: ::: : :. : :: ::
CCDS14 SGFPGLRGEQGPKGNLGLKGIKGDSGFCAC-DGGVPNTGPPGEPGPPGPWGLIGLPGLKG
460 470 480 490 500 510
520 530 540 550 560 570
pF1KB9 DKGDPGQHGLPGFPGLKGVPGNIGAPGPKGAKGDSRTITTKGERGQPGVPGVPGMKGDDG
.:: :. : : : :. : .: :::: ::. : .: :. : : :..: :
CCDS14 ARGDRGSGGAQGPAGAPGLVGPLGPSGPKGKKGEPILSTIQGMPGDRGDSGSQGFRGVIG
520 530 540 550 560 570
580 590 600 610 620 630
pF1KB9 SPGRDGLDGFPGLPGPPGDGIKGPPGDPGYPGIPGTKGTPGEMGPPGLGLPGLKGQRGFP
::.::. :.::::: :::: .: ::. : ::.:: :: :: : :: ::::: : ::.:
CCDS14 EPGKDGVPGLPGLPGLPGDGGQGFPGEKGLPGLPGEKGHPGPPGLPGNGLPGLPGPRGLP
580 590 600 610 620 630
640 650 660 670 680 690
pF1KB9 GDAGLPGPPGFLGPPGPAGTPGQIDCDTDVKRAVGGDRQEAIQPGCIAGPKGLPGLPGPP
:: : : :: : :: : . : : :: ::.:.:: :: :
CCDS14 GDKGKDGLPGQQGLPGSKGI--TLPC---------------IIPGSY-GPSGFPGTPGFP
640 650 660 670
700 710 720 730 740 750
pF1KB9 GPTGAKGLRGIPGFAGADGGPGPRGLPGDAGREGFPGPPGFIGPRGSKGAVG---LPGPD
:: :: ::.:: : :. : .: ::. : .: ::: :::: :: : ::: :
CCDS14 GP---KGSRGLPGTPGQPGSSGSKGEPGSPGLVHLPELPGFPGPRGEKGLPGFPGLPGKD
680 690 700 710 720 730
760 770 780 790 800 810
pF1KB9 GSPGPIGLPGPDGPPGERGLPGEVLGAQPGPRGDAGVPGQPGLKGLPGDRGPPGFRGSQG
: :: :: :: :: .: :...::. : :. :. : : ::. :: : ::..: .:
CCDS14 GLPGMIGSPGL---PGSKGATGDIFGAENGAPGEQGLQGLTGHKGFLGDSGLPGLKGVHG
740 750 760 770 780
820 830 840 850 860 870
pF1KB9 MPGMPGLKGQPGLPGPSGQPGLYGPPGLHGFPGAPGQEGPLGLPGIPGREGLPGDRGDPG
::. : ::. : :: :: : : :: : : :. : : ::.:: : :: .: :
CCDS14 KPGLLGPKGERGSPGTPGQVGQPGTPGSSGPYGIKGKSGLPGAPGFPGISGHPGKKGTRG
790 800 810 820 830 840
880 890 900 910 920 930
pF1KB9 DTGAPGPVGMKGLSGDRGDAGFTGEQGHPGSPGFKGIDGMPGTPGLKGDRGSPGMDGFQG
: :: . ::: : .: : : : :::: :. :.:. : ::..:: :. :: :
CCDS14 KKGPPGSIVKKGLPGLKGLPGNPGLVGLKGSPGSPGVAGLPALSGPKGEKGSVGFVGFPG
850 860 870 880 890 900
940 950 960 970 980 990
pF1KB9 MPGLKGRPGFPGSKGEAGFFGIPGLKGLAGEPGFKGSRGDPGPPGPPPVILPGMKDI--K
.::: : :: : :: : : : .: :: :: ::.::.::: : : : :... :
CCDS14 IPGLPGIPGTRGLKGIPGSTGKMGPSGRAGTPGEKGDRGNPGPVGIPSPRRP-MSNLWLK
910 920 930 940 950 960
1000 1010 1020 1030 1040 1050
pF1KB9 GEKGDEGPMGLKGYLGAKGIQGMPGIPGLSGIPGLPGRPGHIKGVKGDIGVPGIPGLPGF
:.::..: : .:. : .: .: : :: :.:: :: :: ::::.: : ::. :. :.
CCDS14 GDKGSQGSAGSNGFPGPRGDKGEAGRPGPPGLPGAPGLPGIIKGVSGKPGPPGFMGIRGL
970 980 990 1000 1010 1020
1060 1070 1080 1090 1100 1110
pF1KB9 PGVAGPPGITGFPGFIGSRGDKGAPGRAGLYGEIGATGDFGDIGDTINLPGRPGLKGERG
::. : :::::::. : :..: : :: : : : :: :.:... : :: ::. :
CCDS14 PGLKGSSGITGFPGMPGESGSQGIRGSPGLPGASGLPGLKGDNGQTVEISGSPGPKGQPG
1030 1040 1050 1060 1070 1080
1120 1130 1140 1150 1160 1170
pF1KB9 TTGIPGLKGFFGEKGTEGDIGFPGITGVTGVQGPPGLKGQTGFPGLTGPPGSQGELGRIG
.:. : : :. : :.::::: : .: :..:..:.:: : :: : :. :
CCDS14 ESGFKGTK---GRDGLIGNIGFPGNKGE---DGKVGVSGDVGLPGAPGFPGVAGMRGEPG
1090 1100 1110 1120 1130 1140
1180 1190 1200 1210 1220
pF1KB9 LPGGKGDDGW--P-GAPGL--P-GFPGLRGIRGLHGLPGTKGFPGSPGSDIHGDPG---F
:::..: .: : :.::: : ::::. :..::.::::::: :.:: .: : :: .
CCDS14 LPGSSGHQGAIGPLGSPGLIGPKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGL
1150 1160 1170 1180 1190 1200
1230 1240 1250 1260 1270 1280
pF1KB9 PGPPGERGDPGEANTLPGPVGVPGQKGDQGAPGERGPPGSPGLQGFPGITPPSNISGAPG
::: ::.: :: . :: :. :::::.: :: .:: : :: :::. :: :.: ::
CCDS14 PGPKGEKGYPGIGIGAPGKPGLRGQKGDRGFPGLQGPAGLPGA---PGISLPSLIAGQPG
1210 1220 1230 1240 1250
1290 1300 1310 1320 1330 1340
pF1KB9 DKGAPGIFGLKGYRGPPGPPGSAALPGSKGDTGNPGAPGTPGTKGWAGDSGPQGRPGVFG
: : ::. : .: :: :::: . ...::::.:: :: :: :: :: :: :: :
CCDS14 DPGRPGLDGERGRPGPAGPPGPPGPSSNQGDTGDPGFPGIPGPKGPKGD---QGIPGFSG
1260 1270 1280 1290 1300 1310
1350 1360 1370 1380 1390
pF1KB9 LPGE---KGPRGEQGFMGNTGPTGAVGDRGPKGPKGDPGFPGAPGTVGAPGIAGIPQKIA
:::: :: ::: ::::. : .: :: : : :: : :. : : :: . . .
CCDS14 LPGELGLKGMRGEPGFMGTPGKVGPPGDPGFPGMKGKAGPRGSSGLQGDPGQTPTAEAVQ
1320 1330 1340 1350 1360 1370
1400 1410 1420 1430 1440 1450
pF1KB9 VQPGTVGPQGRRGPPGAPGEMGPQGPPGEPGFRGAPGKAGPQGRGGVSAVPGFRGDEGPI
: :: .: : : :: :. : ::: : : .: :: : .: .:. . :: :: :
CCDS14 VPPGPLGLPGIDGIPGLTGDPGAQGPVGLQGSKGLPGIPGKDGPSGLPGPPGALGDPGLP
1380 1390 1400 1410 1420 1430
1460 1470 1480 1490 1500 1510
pF1KB9 GHQGPIGQEGAPGRPGSPGLPGMPGRSVSIGYLLVKHSQTDQEPMCPVGMNKLWSGYSLL
: ::: : :::::. : :.:::::.:. .:: ::::::..: : ::.::..:: :::::
CCDS14 GLQGPPGFEGAPGQQGPFGMPGMPGQSMRVGYTLVKHSQSEQVPPCPIGMSQLWVGYSLL
1440 1450 1460 1470 1480 1490
1520 1530 1540 1550 1560 1570
pF1KB9 YFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASRNDKSYWLSTTAPLPMMPV
. ::::::::::::.::::: :::::::.::: ..::.:: :::::::::::::.:::::
CCDS14 FVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMPV
1500 1510 1520 1530 1540 1550
1580 1590 1600 1610 1620 1630
pF1KB9 AEDEIKPYISRCSVCEAPAIAIAVHSQDVSIPHCPAGWRSLWIGYSFLMHTAAGDEGGGQ
.. .: :::::::::::. ::::::::..::.:: :::::::::::::::::: :::::
CCDS14 SQTQIPQYISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQ
1560 1570 1580 1590 1600 1610
1640 1650 1660 1670 1680 1690
pF1KB9 SLVSPGSCLEDFRATPFIECNGGRGTCHYYANKYSFWLTTIPE-QSFQGSPSADTLKAGL
::::::::::::::::::::.:.::::::.::::::::::. : :.: : ..:::::
CCDS14 SLVSPGSCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFGELPVSETLKAGQ
1620 1630 1640 1650 1660 1670
1700 1710
pF1KB9 IRTHISRCQVCMKNL
..:..::::::::.:
CCDS14 LHTRVSRCQVCMKSL
1680 1690
>>CCDS9511.1 COL4A1 gene_id:1282|Hs108|chr13 (1669 aa)
initn: 3801 init1: 939 opt: 4883 Z-score: 2077.1 bits: 397.4 E(32554): 2.3e-109
Smith-Waterman score: 5527; 49.2% identity (63.1% similar) in 1725 aa overlap (10-1710:2-1667)
10 20 30 40 50 60
pF1KB9 MGRDQRAVAGPALRRWLLLGTVTVGFLAQSVLAGVKKFDVPCGGRDCSGGCQCYPEKGGR
:: : :::: ... . . :..: :.: : : :.:. :: .
CCDS95 MGPRLSVWLLLLPAALLLHEEHSRAAAKG---GCAGSGC-GKCDCHGVKGQK
10 20 30 40
70 80 90 100 110 120
pF1KB9 GQPGPVGPQGYNGPPGLQGFPGLQGRKGDKGERGAPGVTGPKGDVGARGVSGFPGADGIP
:. : : :: : ::.:: : :: :.::. : ::. : :: : :.::.:: :.:
CCDS95 GERGLPGLQGVIGFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGASGYPGNPGLP
50 60 70 80 90 100
130 140 150 160 170
pF1KB9 GHPGQGGPRGRPGYDGCNGTQGDSGPQGPPGSEGFTGPPGPQGPKGQKGEP-YALPKEER
: ::: :: : :: :::::.:. :: :::: ::.: ::: : :.::.: : .
CCDS95 GIPGQDGPPGPPGIPGCNGTKGERGPLGPPGLPGFAGNPGPPGLPGMKGDPGEILGHVPG
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB9 DRYRGEPGEPGLVGFQGPPGRPGHVGQMGPVGAPGRPGPPGPPGPKGQQGNRGLGFYGVK
.:: : ::. : :::: :: : .:: : : ::::::::: :..:. ::.: : :
CCDS95 MLLKGERGFPGIPGTPGPPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPK
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB9 GEKGDVGQPGPNGIPSDTLHPIIAPTGVTFHPDQYKGEKGSEGEPGIRGISLKGEEGIMG
:.::: : :: :.:... . : : :::::..::::..:. ::.: :
CCDS95 GDKGDQGVSGPPGVPGQAQ---VQEKG-DFAT---KGEKGQKGEPGFQGMPGVGEKGEPG
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB9 FPGLRGYPGLSG---EKGSPGQKGSRGLDGYQGPDGPRGPKGEAGDPGPPGLPAYSPHPS
:: :: :: .: :::::: : : : : .::.: ::::: :::::. . . :
CCDS95 KPGPRGKPGKDGDKGEKGSPGFPGEPGYPGLIGRQGPQGEKGEAGPPGPPGI-VIGTGPL
290 300 310 320 330 340
360 370 380 390 400 410
pF1KB9 LAKGARGDPGFPGAQGEPGSQGEPGDPGLPGPPGLSIGDGDQRRGLPGEMGPKGFIGDPG
:: :: :: :: .:::: .: :: :: :::::: . :.::: : :: : :
CCDS95 GEKGERGYPGTPGPRGEPGPKGFPGLPGQPGPPGLPVPGQAGAPGFPGERGEKG---DRG
350 360 370 380 390
420 430 440 450 460 470
pF1KB9 IPALYGGPPGPDGKRGPPGPPGLPGPPGPDGFLFGL----KGAKGRAGFPGLPGSPGARG
.:. . :::.:. : ::::: ::::: :. :. : : : ::.::.:: :
CCDS95 FPGT--SLPGPSGRDGLPGPPGSPGPPGQPGYTNGIVECQPGPPGDQGPPGIPGQPGFIG
400 410 420 430 440 450
480 490 500 510 520 530
pF1KB9 PKGWKGDAGECRCTEGD-EAIKGLPGLPGPKGFAGINGEPGRKGDKGDPGQHGLPGFPGL
: ::. :: : : .. .: :: :: : :. :.:: :::.: ::. :. : ::
CCDS95 EIGEKGQKGES-CLICDIDGYRGPPGPQGPPGEIGFPGQPGAKGDRGLPGRDGVAGVPGP
460 470 480 490 500 510
540 550 560 570 580 590
pF1KB9 KGVPGNIGAPGPKGAKGDSR-TITTKGERGQPGVPGVPGMKGDDGSPGRDGLDGFPGLPG
.:.:: :: :: :: :. . ::..:.:: :: ::: : ::::::: :.:: :
CCDS95 QGTPGLIGQPGAKGEPGEFYFDLRLKGDKGDPGFPGQPGMPGRAGSPGRDGHPGLPGPKG
520 530 540 550 560 570
600 610 620 630 640
pF1KB9 PPGD-GIKGPPGDPGYPGIPGTKGTPGEMGPPGLGLPGLKGQRGFPGDAGLPGPPGFLGP
::. :.:: : :: :.::..: : :::: : : :.. :.::.:: :: :
CCDS95 SPGSVGLKGERGPPGGVGFPGSRGDTGPPGPPGYGPAGPIGDK---GQAGFPGGPGSPGL
580 590 600 610 620 630
650 660 670 680 690 700
pF1KB9 PGPAGTPGQIDCDTDVKRAVGGDRQEAIQPGCIAGPKGLPGLPGPPGPTGAKGLRGIPGF
::: : ::.: : . :: : :::: :: : .: ::.::
CCDS95 PGPKGEPGKI------------------VP--LPGPPGAEGLPGSPGFPGPQGDRGFPGT
640 650 660 670
710 720 730 740 750 760
pF1KB9 AGADGGPGPRGLPGDAGREGFPGPPGFIGPRGSKGAVGLPGPDGSPGPIGLPGPDGPPGE
: : :: .: :. : ::::::: : : : .: :: : :: :::: : :.
CCDS95 PGRPGLPGEKGAVGQPGI-GFPGPPGPKGVDGLPGDMGPPGTPGRPGFNGLPGNPGVQGQ
680 690 700 710 720 730
770 780 790 800 810 820
pF1KB9 RGLPGEVLGAQPGPRGDAGVPGQPGLKGLPGDRGPPGFRGSQGMPGMPGLKGQPGLPGPS
.: :: : :: .: :.:: :: : :. : :: : .: : :::.: : :::
CCDS95 KGEPGVGL---PGLKGLPGLPGIPGTPGEKGSIGVPGVPGEHGAIGPPGLQGIRGEPGPP
740 750 760 770 780
830 840 850 860 870 880
pF1KB9 GQPGLYGPPGLHGFPGAPGQEGPLGLPGIPGREGLPGDRGDPGDTGAPGPVGMKGLSGDR
: :: : ::. :. : :: .:: : : :: : :: .:. : : :: . : : .::.
CCDS95 GLPGSVGSPGVPGI-GPPGARGPPGGQGPPGLSGPPGIKGEKGFPGFPG-LDMPGPKGDK
790 800 810 820 830 840
890 900 910 920 930 940
pF1KB9 GDAGF---TGEQGHPGSPGFKGIDGMPGTPGLKGDRGSPGMDGFQGMPGLKGRPGFPGSK
: :. ::..: :: :: .: :.:: :: ::. : : : : :: : ::.:: :
CCDS95 GAQGLPGITGQSGLPGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAPGLPGEK
850 860 870 880 890 900
950 960 970 980 990 1000
pF1KB9 GEAGFFGIPGLKGLAGEPGFKGSRGDPGPPGPPPVILP-GMKDIKGEKGDEGPMGLKGYL
:. :: :: .: :.::.::..:: : :: : . : ..::.:::.: : : .
CCDS95 GDHGF---PGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPI
910 920 930 940 950 960
1010 1020 1030 1040 1050 1060
pF1KB9 GAKGIQGMPGIPGLSGIPGLPGRPGHIKGVKGDIGVPGIPGLPGFPGVAGPPGITGFPGF
: :: .: :: ::. : : :.::. : ::: :. : :: ::.:: : : :.::
CCDS95 GEKGSRGDPGTPGVPGKDGQAGQPGQ-PGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGT
970 980 990 1000 1010 1020
1070 1080 1090 1100 1110 1120
pF1KB9 IGSRGDKGAPG---RAGLYGEIGATGDFGDIGDTINLPGRPGLKGERGTTGIPGLKGFFG
: .: : :: :: :. :: :. :. : : :::.::.: :: :. : :
CCDS95 PGEKGVPGIPGPQGSPGLPGDKGAKGEKGQAGPPGI--GIPGLRGEKGDQGIAGFPGSPG
1030 1040 1050 1060 1070
1130 1140 1150 1160 1170 1180
pF1KB9 EKGTEGDIGFPGITGVTGVQGPPGLKGQTGFPGLTGPPGSQGELGRIGLPGGKGDDGWPG
::: .:.::.::. : :..: :: : : ::: : :..: : :.:: ::. : ::
CCDS95 EKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPG
1080 1090 1100 1110 1120 1130
1190 1200 1210 1220 1230 1240
pF1KB9 APGLPGFPGLRGIRGLHGLPGTKGFPGSPGSDIHGDPGFPGPPGERGDPGEANTLPGPVG
.:: : : .: : :.::. : : :: .: ::::: :..:. ::.. .:: .:
CCDS95 TPGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGSKGEVG-FPGLAG
1140 1150 1160 1170 1180 1190
1250 1260 1270 1280 1290 1300
pF1KB9 VPGQKGDQGAPGERGPPGSPGLQGFPGITPPSNISGAPGDKGAPGIFGLKGYRGPPGPPG
:: :..: : :::: : :.:: .: : ::.: : :: : :: ::::
CCDS95 SPGIPGSKGEQGFMGPPGPQGQPGLPG-SPGHATEGPKGDRGPQGQPGLPGLPGPMGPPG
1200 1210 1220 1230 1240 1250
1310 1320 1330 1340 1350
pF1KB9 SAALPGSKGDTGNPGAPGTPGTKGWAGDSGPQGRPGVFGLPG---EKGPRGEQGFMGNTG
.. : ::: :::: ::.::. : :: : :: ::. : :: :: : : : :
CCDS95 LPGIDGVKGDKGNPGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVPGFQG
1260 1270 1280 1290 1300 1310
1360 1370 1380 1390 1400 1410
pF1KB9 PTGAVGDRGPKGPKGDPGFPGAPGTVGAPGIAGIPQKIAVQPGTVGPQGRRGPPGAPGEM
: : : .: :: .:: : ::: : : :: : . : .:: ::.: ::: : .
CCDS95 PKGLPGLQGIKGDQGDQGVPGAKGLPGPPGPPGPYDIIKGEPGLPGPEG---PPGLKGLQ
1320 1330 1340 1350 1360 1370
1420 1430 1440 1450 1460 1470
pF1KB9 GPQGPPGEPGFRGAPGKAGPQGRGGVSAVPGFRGDEGPIGHQGPIGQEGAPGRPGSPGLP
: :: :. : : : :: : : ...:: .:. :: : :: : : :: : ::
CCDS95 GLPGPKGQQGVTGLVGIPGPPGIPGFDGAPGQKGEMGPAGPTGPRGFPGPPGPDGLPGSM
1380 1390 1400 1410 1420 1430
1480 1490 1500 1510 1520 1530
pF1KB9 GMPGR-SVSIGYLLVKHSQTDQEPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCL
: :: ::. :.:...:::: ..:.:: : . :. :::::: .:.:.::.:::: :::::
CCDS95 GPPGTPSVDHGFLVTRHSQTIDDPQCPSGTKILYHGYSLLYVQGNERAHGQDLGTAGSCL
1440 1450 1460 1470 1480 1490
1540 1550 1560 1570 1580 1590
pF1KB9 ARFSTMPFLYCNPGDVCYYASRNDKSYWLSTTAPLPM--MPVAEDEIKPYISRCSVCEAP
.:::::::.:: ..:: .::::: :::::: :.:: :.. ..:.:.::::.:::::
CCDS95 RKFSTMPFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGENIRPFISRCAVCEAP
1500 1510 1520 1530 1540 1550
1600 1610 1620 1630 1640 1650
pF1KB9 AIAIAVHSQDVSIPHCPAGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFI
:...::::: ..:: ::.:: ::::::::.:::.:: ::.::.:.:::::::.::..:::
CCDS95 AMVMAVHSQTIQIPPCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFI
1560 1570 1580 1590 1600 1610
1660 1670 1680 1690 1700 1710
pF1KB9 ECNGGRGTCHYYANKYSFWLTTIPEQSFQGSPSADTLKAGLIRTHISRCQVCMKNL
::.: ::::.:::: :::::.:: .. . .:. .::::: .:::.:::::::.
CCDS95 ECHG-RGTCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT
1620 1630 1640 1650 1660
>>CCDS76009.1 COL4A6 gene_id:1288|Hs108|chrX (1666 aa)
initn: 3575 init1: 2249 opt: 4707 Z-score: 2002.9 bits: 383.6 E(32554): 3e-105
Smith-Waterman score: 5730; 51.1% identity (64.3% similar) in 1736 aa overlap (11-1712:3-1666)
10 20 30 40 50 60
pF1KB9 MGRDQRAVAGPALRRWLLLGTVTVGFLAQSVLAGVKKFDVPCGGRDCSGGCQCYPEKGGR
:.: :::: ::. . . . :: :.. ::::.::::.:::.::::.:
CCDS76 MHPGL--WLLL--VTLCLTEELAAAGEKSYGKPCGGQDCSGSCQCFPEKGAR
10 20 30 40
70 80 90 100 110 120
pF1KB9 GQPGPVGPQGYNGPPGLQGFPGLQGRKGDKGERGAPGVTGPKGDVGARGVSGFPGADGIP
:.:::.: :: .:: :. : ::.: ::..: : : ::::: : :: :: : .:::
CCDS76 GRPGPIGIQGPTGPQGFTGSTGLSGLKGERGFPGLLGPYGPKGDKGPMGVPGFLGINGIP
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB9 GHPGQGGPRGRPGYDGCNGTQGDSGPQGPPGSEGFTGPPGPQGPKGQKGEPYALPKEERD
::::: :::: :: :::::::: : :: : :. :::: : ::.::.: : .
CCDS76 GHPGQPGPRGPPGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPVLAPGSFKG
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB9 RYRGEPGEPGLVGFQGPPGRPGHVGQMGPVGAPGRPGPPGPPGPKGQQGNRGLGFYGVKG
..:.:: ::: :. :: : :: : .::.: :: :::::::: : .:: :::: : ::
CCDS76 -MKGDPGLPGLDGITGPQGAPGFPGAVGPAGPPGLQGPPGPPGPLGPDGNMGLGFQGEKG
170 180 190 200 210 220
250 260 270 280
pF1KB9 EKGDVGQPGPNGIPSDT--LHPIIAPTGVTFHPDQYKGEKGSEGEPGIRGI---------
::::: ::: : : .: :. . : : ::: : .: ::: :
CCDS76 VKGDVGLPGPAGPPPSTGELEFMGFPKG----KKGSKGEPGPKGFPGISGPPGFPGLGTT
230 240 250 260 270 280
290 300 310 320 330 340
pF1KB9 ---SLKGEEGIMGFPGLRGYPGLSGEKGSPGQKGSRGLDGYQGPDGPRGPKGEAGDPGPP
. :::.:: :.:: :: : : .: :::.:..: :. : .: .: .:. :: : :
CCDS76 GEKGEKGEKGIPGLPGPRGPMGSEGVQGPPGQQGKKGTLGFPGLNGFQGIEGQKGDIGLP
290 300 310 320 330 340
350 360 370 380 390 400
pF1KB9 GLPAY-SPHPSLAKGARGDPG---FPGAQGEPGSQGEPGDPGLPGPPGLSIGDGDQRRGL
: .. . .. .: :::: .:: .:. : :: : :.:: :.:: :.
CCDS76 GPDVFIDIDGAVISGNPGDPGVPGLPGLKGDEGIQGLRGPSGVPGLPALS--------GV
350 360 370 380 390
410 420 430 440 450
pF1KB9 PGEMGPKGFIG---DPGIPALYG-GPPGPDGKRGPPGPPGLPGPPGPDGFLFGLKGAKGR
:: .::.:: : : : :. : : :. : ::::: ::::.:. :.. .
CCDS76 PGALGPQGFPGLKGDQGNPGRTTIGAAGLPGRDGLPGPPGPPGPPSPEFETETLHNKE--
400 410 420 430 440 450
460 470 480 490 500 510
pF1KB9 AGFPGLPGSPGARGP---KGWKGDAGECRCTEGDEAIKGLPGLPGPKGFAGINGEPGRKG
.::::: : : .: :: :::.: : : .: : :: ::: : :. : :: ::
CCDS76 SGFPGLRGEQGPKGNLGLKGIKGDSGFCAC-DGGVPNTGPPGEPGPPGPWGLIGLPGLKG
460 470 480 490 500 510
520 530 540 550 560 570
pF1KB9 DKGDPGQHGLPGFPGLKGVPGNIGAPGPKGAKGDSRTITTKGERGQPGVPGVPGMKGDDG
.:: :. : : : :. : .: :::: ::. : .: :. : : :..: :
CCDS76 ARGDRGSGGAQGPAGAPGLVGPLGPSGPKGKKGEPILSTIQGMPGDRGDSGSQGFRGVIG
520 530 540 550 560 570
580 590 600 610 620 630
pF1KB9 SPGRDGLDGFPGLPGPPGDGIKGPPGDPGYPGIPGTKGTPGEMGPPGLGLPGLKGQRGFP
::.::. :.::::: :::: .: ::. : ::.:: :: :: : :: ::::: : ::.:
CCDS76 EPGKDGVPGLPGLPGLPGDGGQGFPGEKGLPGLPGEKGHPGPPGLPGNGLPGLPGPRGLP
580 590 600 610 620 630
640 650 660 670 680 690
pF1KB9 GDAGLPGPPGFLGPPGPAGTPGQIDCDTDVKRAVGGDRQEAIQPGCIAGPKGLPGLPGPP
:: : : :: : :: : . : : :: ::.:.:: :: :
CCDS76 GDKGKDGLPGQQGLPGSKGI--TLPC---------------IIPGSY-GPSGFPGTPGFP
640 650 660 670
700 710 720 730 740 750
pF1KB9 GPTGAKGLRGIPGFAGADGGPGPRGLPGDAGREGFPGPPGFIGPRGSKGAVG---LPGPD
:: :: ::.:: : :. : .: ::. : .: ::: :::: :: : ::: :
CCDS76 GP---KGSRGLPGTPGQPGSSGSKGEPGSPGLVHLPELPGFPGPRGEKGLPGFPGLPGKD
680 690 700 710 720 730
760 770 780 790 800 810
pF1KB9 GSPGPIGLPGPDGPPGERGLPGEVLGAQPGPRGDAGVPGQPGLKGLPGDRGPPGFRGSQG
: :: :: :: :: .: :...::. : :. :. : : ::. :: : ::..: .:
CCDS76 GLPGMIGSPGL---PGSKGATGDIFGAENGAPGEQGLQGLTGHKGFLGDSGLPGLKGVHG
740 750 760 770 780
820 830 840 850 860 870
pF1KB9 MPGMPGLKGQPGLPGPSGQPGLYGPPGLHGFPGAPGQEGPLGLPGIPGREGLPGDRGDPG
::. : ::. : :: :: : : :: : : :. : : ::.:: : :: .: :
CCDS76 KPGLLGPKGERGSPGTPGQVGQPGTPGSSGPYGIKGKSGLPGAPGFPGISGHPGKKGTRG
790 800 810 820 830 840
880 890 900 910 920 930
pF1KB9 DTGAPGPVGMKGLSGDRGDAGFTGEQGHPGSPGFKGIDGMPGTPGLKGDRGSPGMDGFQG
: :: . ::: : .: : : : :::: :. :.:. : ::..:: :. :: :
CCDS76 KKGPPGSIVKKGLPGLKGLPGNPGLVGLKGSPGSPGVAGLPALSGPKGEKGSVGFVGFPG
850 860 870 880 890 900
940 950 960 970 980 990
pF1KB9 MPGLKGRPGFPGSKGEAGFFGIPGLKGLAGEPGFKGSRGDPGPPGPPPVILPGMKDI--K
.::: : :: : :: : : : .: :: :: ::.::.::: : : : :... :
CCDS76 IPGLPGIPGTRGLKGIPGSTGKMGPSGRAGTPGEKGDRGNPGPVGIPSPRRP-MSNLWLK
910 920 930 940 950 960
1000 1010 1020 1030 1040 1050
pF1KB9 GEKGDEGPMGLKGYLGAKGIQGMPGIPGLSGIPGLPGRPGHIKGVKGDIGVPGIPGLPGF
:.::..: : .:. : .: .: : :: :.:: :: :: ::::.: : ::. :. :.
CCDS76 GDKGSQGSAGSNGFPGPRGDKGEAGRPGPPGLPGAPGLPGIIKGVSGKPGPPGFMGIRGL
970 980 990 1000 1010 1020
1060 1070 1080 1090 1100 1110
pF1KB9 PGVAGPPGITGFPGFIGSRGDKGAPGRAGLYGEIGATGDFGDIGDTINLPGRPGLKGERG
::. : :::::::. : :..: : :: : : : :: :.:... : :: ::. :
CCDS76 PGLKGSSGITGFPGMPGESGSQGIRGSPGLPGASGLPGLKGDNGQTVEISGSPGPKGQPG
1030 1040 1050 1060 1070 1080
1120 1130 1140 1150 1160 1170
pF1KB9 TTGIPGLKGFFGEKGTEGDIGFPGITGVTGVQGPPGLKGQTGFPGLTGPPGSQGELGRIG
.:. : :: . : :.::::: : .: :..:..:.:: : :: : :. :
CCDS76 ESGFKGTKG---RDGLIGNIGFPGNK---GEDGKVGVSGDVGLPGAPGFPGVAGMRGEPG
1090 1100 1110 1120 1130 1140
1180 1190 1200 1210 1220 1230
pF1KB9 LPGGKGDDGWPGAPGLPGFPGLRGIRGLHGLPGTKGFPGSPGSDIHGDPGFPGPPGERGD
:::..: .: : : ::. : .: :. : :: :. :.::: ::.:
CCDS76 LPGSSGHQGAIGPLGSPGLIGPKG-------PSITGVPG-PA-------GLPGPKGEKGY
1150 1160 1170 1180
1240 1250 1260 1270 1280 1290
pF1KB9 PGEANTLPGPVGVPGQKGDQGAPGERGPPGSPGLQGFPGITPPSNISGAPGDKGAPGIFG
:: . :: :. :::::.: :: .:: : :: :::. :: :.: ::: : ::. :
CCDS76 PGIGIGAPGKPGLRGQKGDRGFPGLQGPAGLPGA---PGISLPSLIAGQPGDPGRPGLDG
1190 1200 1210 1220 1230 1240
1300 1310 1320 1330 1340
pF1KB9 LKGYRGPPGPPGSAALPGSKGDTGNPGAPGTPGTKGWAGDSGPQGRPGVFGLPGE---KG
.: :: :::: . ...::::.:: :: :: :: :: :: :: ::::: ::
CCDS76 ERGRPGPAGPPGPPGPSSNQGDTGDPGFPGIPGPKGPKGD---QGIPGFSGLPGELGLKG
1250 1260 1270 1280 1290 1300
1350 1360 1370 1380 1390 1400
pF1KB9 PRGEQGFMGNTGPTGAVGDRGPKGPKGDPGFPGAPGTVGAPGIAGIPQKIAVQPGTVGPQ
::: ::::. : .: :: : : :: : :. : : :: . . . : :: .:
CCDS76 MRGEPGFMGTPGKVGPPGDPGFPGMKGKAGPRGSSGLQGDPGQTPTAEAVQVPPGPLGLP
1310 1320 1330 1340 1350 1360
1410 1420 1430 1440 1450 1460
pF1KB9 GRRGPPGAPGEMGPQGPPGEPGFRGAPGKAGPQGRGGVSAVPGFRGDEGPIGHQGPIGQE
: : :: :. : ::: : : .: :: : .: .:. . :: :: : : ::: : :
CCDS76 GIDGIPGLTGDPGAQGPVGLQGSKGLPGIPGKDGPSGLPGPPGALGDPGLPGLQGPPGFE
1370 1380 1390 1400 1410 1420
1470 1480 1490 1500 1510 1520
pF1KB9 GAPGRPGSPGLPGMPGRSVSIGYLLVKHSQTDQEPMCPVGMNKLWSGYSLLYFEGQEKAH
::::. : :.:::::.:. .:: ::::::..: : ::.::..:: :::::. :::::::
CCDS76 GAPGQQGPFGMPGMPGQSMRVGYTLVKHSQSEQVPPCPIGMSQLWVGYSLLFVEGQEKAH
1430 1440 1450 1460 1470 1480
1530 1540 1550 1560 1570 1580
pF1KB9 NQDLGLAGSCLARFSTMPFLYCNPGDVCYYASRNDKSYWLSTTAPLPMMPVAEDEIKPYI
:::::.::::: :::::::.::: ..::.:: :::::::::::::.:::::.. .: ::
CCDS76 NQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMPVSQTQIPQYI
1490 1500 1510 1520 1530 1540
1590 1600 1610 1620 1630 1640
pF1KB9 SRCSVCEAPAIAIAVHSQDVSIPHCPAGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCL
:::::::::. ::::::::..::.:: :::::::::::::::::: ::::::::::::::
CCDS76 SRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCL
1550 1560 1570 1580 1590 1600
1650 1660 1670 1680 1690 1700
pF1KB9 EDFRATPFIECNGGRGTCHYYANKYSFWLTTIPE-QSFQGSPSADTLKAGLIRTHISRCQ
:::::::::::.:.::::::.::::::::::. : :.: : ..::::: ..:..::::
CCDS76 EDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFGELPVSETLKAGQLHTRVSRCQ
1610 1620 1630 1640 1650 1660
1710
pF1KB9 VCMKNL
::::.:
CCDS76 VCMKSL
>>CCDS42828.1 COL4A4 gene_id:1286|Hs108|chr2 (1690 aa)
initn: 2851 init1: 1100 opt: 4629 Z-score: 1970.0 bits: 377.6 E(32554): 2.1e-103
Smith-Waterman score: 5464; 49.7% identity (62.0% similar) in 1745 aa overlap (16-1710:24-1688)
10 20 30 40 50
pF1KB9 MGRDQRAVAGPALRRWLLLGTVTVGFLAQSVLAGVKKFDVPCGGRDCSGGCQ
: : . . : .: : .. ::. :::::::: :.
CCDS42 MWSLHIVLMRCSFRLTKSLATGPWSL---ILILFSVQYVYGSGKKYIGPCGGRDCSV-CH
10 20 30 40 50
60 70 80 90 100 110
pF1KB9 CYPEKGGRGQPGPVGPQGYNGPPGLQGFPGLQGRKGDKGERGAPGVTGPKGDVGARGVSG
: ::::.:: ::: :::: :: : : ::.:.:: .:.:: ::..: ::: : :: :
CCDS42 CVPEKGSRGPPGPPGPQGPIGPLGAPGPIGLSGEKGMRGDRGPPGAAGDKGDKGPTGVPG
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB9 FPGADGIPGHPGQGGPRGRPGYDGCNGTQGDSGPQGPPGSEGFTGPPGPQGPKGQKGEPY
::: :::::::: ::::.::..: ::..:: : : :. : :: : : ::.::.
CCDS42 FPGLDGIPGHPGPPGPRGKPGMSGHNGSRGDPGFPGGRGALGPGGPLGHPGEKGEKGNSV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB9 ALPKEERDRYRGEPGEPGLVGFQGPPGRPGHVGQMGPVGAPGRPGPPGPPGPKGQQGNRG
. . .:. :.::: :. :: : : ::.: ::.:: :::: :. : .:
CCDS42 FILGAVKG-IQGDRGDPGLPGL---PGSWGAGGPAGPTGYPGEPGLVGPPGQPGRPGLKG
180 190 200 210 220 230
240 250 260 270 280
pF1KB9 LGFYGVKGEKGDVGQPGPNGIPSDTLHPIIAPTGVTFHPD--QYKGEKGSEGEPGI----
::::. :: :. : .: :. :: .. : :: :::::: .: ::.
CCDS42 NPGVGVKGQMGDPGEVGQQGSPGPTL--LVEP------PDFCLYKGEKGIKGIPGMVGLP
240 250 260 270 280
290 300 310 320 330
pF1KB9 --------RGISLKGEEGIMGFPGLRGYPGLSGEKGSPGQKGSRGLDGYQGPDGPRGPKG
::. :::.:: :::: :: :: : : :: :: :: : : : ::::
CCDS42 GPPGRKGESGIGAKGEKGIPGFPGPRGDPGSYGSPGFPGLKGELGLVGDPGLFGLIGPKG
290 300 310 320 330 340
340 350 360 370 380 390
pF1KB9 EAGD---PGPPGLPAYSPHPSLAKGARGDPGFPGAQGEPGSQGEPGDPGLPGPPGLSIGD
. :. :::::. . : : :: ::::::: :: :. : :: ::: : :: . .
CCDS42 DPGNRGHPGPPGVLVTPPLP--LKGPPGDPGFPGRYGETGDVGPPGPPGLLGRPGEACA-
350 360 370 380 390 400
400 410 420 430 440
pF1KB9 GDQRRGLPGEMGPKGFIGDPGIPALYGGPPGPD---GKRGPPGPPGLPGPPGPDGF----
:. : ::.:: : ::.:. : : :: :: : :: ::::: :: .:.
CCDS42 -----GMIGPPGPQGFPGLPGLPGEAGIPGRPDSAPGKPGKPGSPGLPGAPGLQGLPGSS
410 420 430 440 450
450 460 470 480 490 500
pF1KB9 -LFGLKGAKGRAGFPGLPGSPGARGPKGWKGDAGECRCTEGDEAIKGLPGLPGPKGFAGI
.. : : :. : : ::.::::: ::. : : : : . : ::::: .: :
CCDS42 VIYCSVGNPGPQGIKGKVGPPGGRGPKGEKGNEGLCACEPGPMGPPGPPGLPGRQGSKGD
460 470 480 490 500 510
510 520 530 540 550 560
pF1KB9 NGEPGRKGDKGDPGQHGLPGFPGLKGVPGNIGAPGPKGAKGDSRTITTKGERGQPGVPGV
: :: : ::::: : : ::: : : : :: :::::: . .::..:. : :
CCDS42 LGLPGWLGTKGDPGPPGAEGPPGLPGKHGASGPPGNKGAKGDMVVSRVKGHKGERGPDGP
520 530 540 550 560 570
570 580 590 600 610 620
pF1KB9 PGMKGDDGSPGRDGLDGFPGLPGPPGDGIKGPPGDPGYPGIPGTKGTPGEMGPPGLGLPG
::. :. :: :::: : : :::::: . :: :.:: : : : .::::::.::
CCDS42 PGFPGQPGSHGRDGHAGEKGDPGPPGDHEDATPGGKGFPGPLGPPGKAGPVGPPGLGFPG
580 590 600 610 620 630
630 640 650 660 670 680
pF1KB9 LKGQRGFPGDAGLPGPPGFLGPPGPAGTPGQ-IDCDTDVKRAVGGDRQEAIQPGCIAGPK
:.:: :: .:: :: :: : : :. :.:.. :: ::
CCDS42 PPGERGHPG---VPGHPGVRGPDGLKGQKGDTISCNV-------------TYPGR-HGP-
640 650 660 670
690 700 710 720 730 740
pF1KB9 GLPGLPGPPGPTGAKGLRGIPGFAGADGGPGPRGLPGDAGREGFPGPPGFIGPRGSKGAV
::. ::::: : : .: ::..:.: : .: :: : .:::::: ::. :
CCDS42 --PGFDGPPGPKGFPGPQGAPGLSGSD---GHKGRPGTPGTAEIPGPPGF---RGDMGDP
680 690 700 710 720 730
750 760 770 780 790 800
pF1KB9 GLPGPDGSPGPIGLPGPDGPPG---ERGLPGEVLGAQPGPRGDAGVPGQPGLKGLPGDRG
:. : :: .:.: ::: : :: ..:.::. .. :: : :. : ::.:: :: :
CCDS42 GFGGEKGS-SPVGPPGPPGSPGVNGQKGIPGDPAFGHLGPPGKRGLSGVPGIKGPRGDPG
740 750 760 770 780
810 820 830 840 850 860
pF1KB9 PPGFRGSQGMPGMPGLKGQPGLPGPSGQPGLYGPPGLHGFPGAPGQEGPLGLPGIPGREG
:: .: :.::. :::: : : .: ::. :::: :::: : :::: :: :
CCDS42 CPGAEGPAGIPGFLGLKGPKGREGHAGFPGVPGPPGHSCERGAPGIPGQPGLPGYPGSPG
790 800 810 820 830 840
870 880 890 900 910 920
pF1KB9 LPGDRGDPGDTGAPGPVGMKGLSGDRGDAGFTGEQGHPGSPGFKGIDGMPGTPGLKGDRG
:: .:.:::.: :::.::::: : : : : : :: :: : ::.:: :: :: ::
CCDS42 APGGKGQPGDVGPPGPAGMKGLPGLPGRPGAHGPPGLPGIPGPFGDDGLPGPPGPKGPRG
850 860 870 880 890 900
930 940 950 960 970 980
pF1KB9 SPGMDGFQGMPGLKGRPGFPGSKGEAGFFGIPGLKGLAGEPGFKGSRGDPGPPGPPPVIL
: :: :.:: .:.:: : : : : :..:: :. :..:..: :::: .
CCDS42 LP---GFPGFPGERGKPGAEGCPGAKGEPGEKGMSGLPGDRGLRGAKGAIGPPGDEGEM-
910 920 930 940 950 960
990 1000 1010 1020 1030 1040
pF1KB9 PGMKDIKGEKGDEGPMGLKGYLGAKGIQGMPGIPGLSGIPGLPGRPGHIKGVKGDIGVPG
.. . :: :. :: : :. : .: .: ::. : : :: : :: .: :. : ::
CCDS42 -AIISQKGTPGEPGPPGDDGFPGERGDKGTPGMQGRRGEPGRYGPPGFHRGEPGEKGQPG
970 980 990 1000 1010 1020
1050 1060 1070 1080 1090 1100
pF1KB9 IPGLPGFPGVAGPPGITGFPGFIGSRGDKGAPGRAGLYGEIGATGDFGDIGDTINLPGRP
:: :: :: .: :. ::::. :..:. :.:: :. : :: : :. :: . : :
CCDS42 PPGPPGPPGSTGLRGFIGFPGLPGDQGEPGSPGPPGFSGIDGARGPKGNKGDPASHFGPP
1030 1040 1050 1060 1070 1080
1110 1120 1130 1140 1150 1160
pF1KB9 GLKGERGTTGIPGLKGFFGEKGT---EGDIGFPGITGVTGVQGPPGLKGQTGFPGLTGPP
: ::: :. : :: : ::.: .: : :: : : .:::: :. :.::: : :
CCDS42 GPKGEPGSPGCPGHFGASGEQGLPGIQGPRGSPGRPGPPGSSGPPGCPGDHGMPGLRGQP
1090 1100 1110 1120 1130 1140
1170 1180 1190 1200 1210 1220
pF1KB9 GSQGELGRIGLPGGKGDDGWPGAPGLPGFPGLRGIRGLHGLPGTKGFPGSPGSDIHGDPG
: .:. : :: .:: : :: ::. : : :. ::::: : :: :. : : ::
CCDS42 GEMGDPGPRGL---QGDPGIPGPPGIKGPSGSPGLNGLHGLKGQKGTKGASGLHDVGPPG
1150 1160 1170 1180 1190 1200
1230 1240 1250 1260 1270
pF1KB9 ---FPGPPGERGDPGEANTLPG--PVGVPGQKGDQGAPGERGPPGSPGLQGFPGITPPSN
.:: ::::::: :: : : :.:: : :: :::: : : :..
CCDS42 PVGIPGLKGERGDPGS----PGISPPGPRGKKGPPGPPGSSGPPGPAGATG----RAPKD
1210 1220 1230 1240 1250
1280 1290 1300 1310 1320 1330
pF1KB9 IS--GAPGDKGAPGIFGLKGYRGPPGPPGSAAL-PGSKGDTGNPGAPGTPGTKGWAGDSG
: : :::.: :: : .: :::: :::. : : :: : :: :: ::
CCDS42 IPDPGPPGDQGPPGPDGPRGAPGPPGLPGSVDLLRGEPGDCGLPGPPGPPG---------
1260 1270 1280 1290 1300
1340 1350 1360 1370 1380 1390
pF1KB9 PQGRPGVFGLPGEKGPRGEQGFMGNTGPTGAVGDRGPKGPKGDPGFPGAPGTVGAPGIAG
: : :: :.:: : :..: .: :: : : :: : :: :: :: : .: :: :
CCDS42 PPGPPGYKGFPGCDGKDGQKGPVGFPGPQGPHGFPGPPGEKGLPGPPGRKGPTGLPGPRG
1310 1320 1330 1340 1350 1360
1400 1410 1420 1430 1440
pF1KB9 IPQKIAVQPGTVGPQGR-RGPPGAPGEMGPQGPPGEPGFRG--APGKAGPQGRGGVSAVP
: :. : : : ::::: ::.: : ::.:: .:: : : : .:
CCDS42 EPGP----PADVDDCPRIPGLPGAPGMRGPEGAMGLPGMRGPSGPGCKGEPGLDGRRGVD
1370 1380 1390 1400 1410 1420
1450 1460 1470 1480 1490 1500
pF1KB9 GFRGDEGPIGHQGPIGQEGAPGRPGSPGLPGMPG-RSVSIGYL----LVKHSQTDQEPMC
: :. :: :..: :..: :: :: :: : :: .. . ::: :: :::::::: :
CCDS42 GVPGSPGPPGRKGDTGEDGYPGGPGPPGPIGDPGPKGFGPGYLGGFLLVLHSQTDQEPTC
1430 1440 1450 1460 1470 1480
1510 1520 1530 1540 1550 1560
pF1KB9 PVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASRNDKS
:.:: .::.::::::.:::::::::::::::::: :::.:: ::: .::.::.:::.:
CCDS42 PLGMPRLWTGYSLLYLEGQEKAHNQDLGLAGSCLPVFSTLPFAYCNIHQVCHYAQRNDRS
1490 1500 1510 1520 1530 1540
1570 1580 1590 1600 1610 1620
pF1KB9 YWLSTTAPLPMMPVAEDEIKPYISRCSVCEAPAIAIAVHSQDVSIPHCPAGWRSLWIGYS
:::...:::::::..:. :.::.:::.:::::: :.:::::: ::: :: :::::::::
CCDS42 YWLASAAPLPMMPLSEEAIRPYVSRCAVCEAPAQAVAVHSQDQSIPPCPQTWRSLWIGYS
1550 1560 1570 1580 1590 1600
1630 1640 1650 1660 1670 1680
pF1KB9 FLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYYANKYSFWLTTIP-EQS
:::::.:::.::::.:.:::::::::::.::.::.: .::::..::::::::::. . .
CCDS42 FLMHTGAGDQGGGQALMSPGSCLEDFRAAPFLECQGRQGTCHFFANKYSFWLTTVKADLQ
1610 1620 1630 1640 1650 1660
1690 1700 1710
pF1KB9 FQGSPSADTLKAGLI-RTHISRCQVCMKNL
:...:. :::: . : .:::::::.:
CCDS42 FSSAPAPDTLKESQAQRQKISRCQVCVKYS
1670 1680 1690
>>CCDS76008.1 COL4A6 gene_id:1288|Hs108|chrX (1633 aa)
initn: 3121 init1: 1795 opt: 4446 Z-score: 1893.1 bits: 363.3 E(32554): 4e-99
Smith-Waterman score: 5628; 50.7% identity (64.0% similar) in 1734 aa overlap (11-1712:3-1633)
10 20 30 40 50 60
pF1KB9 MGRDQRAVAGPALRRWLLLGTVTVGFLAQSVLAGVKKFDVPCGGRDCSGGCQCYPEKGGR
:.: :::: ::. . . . :: :.. ::::.::::.:::.::::.:
CCDS76 MHPGL--WLLL--VTLCLTEELAAAGEKSYGKPCGGQDCSGSCQCFPEKGAR
10 20 30 40
70 80 90 100 110 120
pF1KB9 GQPGPVGPQGYNGPPGLQGFPGLQGRKGDKGERGAPGVTGPKGDVGARGVSGFPGADGIP
:.:::.: :: .:: :. : ::.: ::..: : : ::::: : :: :: : .:::
CCDS76 GRPGPIGIQGPTGPQGFTGSTGLSGLKGERGFPGLLGPYGPKGDKGPMGVPGFLGINGIP
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB9 GHPGQGGPRGRPGYDGCNGTQGDSGPQGPPGSEGFTGPPGPQGPKGQKGEPYALPKEERD
::::: :::: :: :::::::: : :: : :. :::: : ::.::.: : .
CCDS76 GHPGQPGPRGPPGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPVLAPGSFKG
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB9 RYRGEPGEPGLVGFQGPPGRPGHVGQMGPVGAPGRPGPPGPPGPKGQQGNRGLGFYGVKG
..:.:: ::: :. :: : :: : .::.: :: :::::::: : .:: :::: : ::
CCDS76 -MKGDPGLPGLDGITGPQGAPGFPGAVGPAGPPGLQGPPGPPGPLGPDGNMGLGFQGEKG
170 180 190 200 210 220
250 260 270 280
pF1KB9 EKGDVGQPGPNGIPSDT--LHPIIAPTGVTFHPDQYKGEKGSEGEPGIRGI---------
::::: ::: : : .: :. . : : ::: : .: ::: :
CCDS76 VKGDVGLPGPAGPPPSTGELEFMGFPKG----KKGSKGEPGPKGFPGISGPPGFPGLGTT
230 240 250 260 270 280
290 300 310 320 330 340
pF1KB9 ---SLKGEEGIMGFPGLRGYPGLSGEKGSPGQKGSRGLDGYQGPDGPRGPKGEAGDPGPP
. :::.:: :.:: :: : : .: :::.:..: :. : .: .: .:. :: : :
CCDS76 GEKGEKGEKGIPGLPGPRGPMGSEGVQGPPGQQGKKGTLGFPGLNGFQGIEGQKGDIGLP
290 300 310 320 330 340
350 360 370 380 390 400
pF1KB9 GLPAY-SPHPSLAKGARGDPG---FPGAQGEPGSQGEPGDPGLPGPPGLSIGDGDQRRGL
: .. . .. .: :::: .:: .:. : :: : :.:: :.:: :.
CCDS76 GPDVFIDIDGAVISGNPGDPGVPGLPGLKGDEGIQGLRGPSGVPGLPALS--------GV
350 360 370 380 390
410 420 430 440 450
pF1KB9 PGEMGPKGFIG---DPGIPALYG-GPPGPDGKRGPPGPPGLPGPPGPDGFLFGLKGAKGR
:: .::.:: : : : :. : : :. : ::::: ::::.:. :.. .
CCDS76 PGALGPQGFPGLKGDQGNPGRTTIGAAGLPGRDGLPGPPGPPGPPSPEFETETLHNKE--
400 410 420 430 440 450
460 470 480 490 500 510
pF1KB9 AGFPGLPGSPGARGP---KGWKGDAGECRCTEGDEAIKGLPGLPGPKGFAGINGEPGRKG
.::::: : : .: :: :::.: : : .: : :: ::: : :. : :: ::
CCDS76 SGFPGLRGEQGPKGNLGLKGIKGDSGFCAC-DGGVPNTGPPGEPGPPGPWGLIGLPGLKG
460 470 480 490 500 510
520 530 540 550 560 570
pF1KB9 DKGDPGQHGLPGFPGLKGVPGNIGAPGPKGAKGDSRTITTKGERGQPGVPGVPGMKGDDG
.:: :. : : : :. : .: :::: ::. : .: :. : : :..: :
CCDS76 ARGDRGSGGAQGPAGAPGLVGPLGPSGPKGKKGEPILSTIQGMPGDRGDSGSQGFRGVIG
520 530 540 550 560 570
580 590 600 610 620 630
pF1KB9 SPGRDGLDGFPGLPGPPGDGIKGPPGDPGYPGIPGTKGTPGEMGPPGLGLPGLKGQRGFP
::.::. :.::::: :::: .: ::. : ::.:: :: :: : :: ::::: : ::.:
CCDS76 EPGKDGVPGLPGLPGLPGDGGQGFPGEKGLPGLPGEKGHPGPPGLPGNGLPGLPGPRGLP
580 590 600 610 620 630
640 650 660 670 680 690
pF1KB9 GDAGLPGPPGFLGPPGPAGTPGQIDCDTDVKRAVGGDRQEAIQPGCIAGPKGLPGLPGPP
:: : : :: : :: : . : : :: ::.:.:: :: :
CCDS76 GDKGKDGLPGQQGLPGSKGI--TLPC---------------IIPGSY-GPSGFPGTPGFP
640 650 660 670
700 710 720 730 740 750
pF1KB9 GPTGAKGLRGIPGFAGADGGPGPRGLPGDAGREGFPGPPGFIGPRGSKGAVG---LPGPD
:: :: ::.:: : :. : .: ::. : .: ::: :::: :: : ::: :
CCDS76 GP---KGSRGLPGTPGQPGSSGSKGEPGSPGLVHLPELPGFPGPRGEKGLPGFPGLPGKD
680 690 700 710 720 730
760 770 780 790 800 810
pF1KB9 GSPGPIGLPGPDGPPGERGLPGEVLGAQPGPRGDAGVPGQPGLKGLPGDRGPPGFRGSQG
: :: :: :: :: .: :...::. : :. :. : : ::. :: : ::..: .:
CCDS76 GLPGMIGSPGL---PGSKGATGDIFGAENGAPGEQGLQGLTGHKGFLGDSGLPGLKGVHG
740 750 760 770 780
820 830 840 850 860 870
pF1KB9 MPGMPGLKGQPGLPGPSGQPGLYGPPGLHGFPGAPGQEGPLGLPGIPGREGLPGDRGDPG
::. : ::. : :: :: : : :: : : :. : : ::.:: : :: .: :
CCDS76 KPGLLGPKGERGSPGTPGQVGQPGTPGSSGPYGIKGKSGLPGAPGFPGISGHPGKKGTRG
790 800 810 820 830 840
880 890 900 910 920 930
pF1KB9 DTGAPGPVGMKGLSGDRGDAGFTGEQGHPGSPGFKGIDGMPGTPGLKGDRGSPGMDGFQG
: :: . ::: : .: : : : :::: :. :.:. : ::..:: :. :: :
CCDS76 KKGPPGSIVKKGLPGLKGLPGNPGLVGLKGSPGSPGVAGLPALSGPKGEKGSVGFVGFPG
850 860 870 880 890 900
940 950 960 970 980 990
pF1KB9 MPGLKGRPGFPGSKGEAGFFGIPGLKGLAGEPGFKGSRGDPGPPGPPPVILPGMKDI--K
.::: : :: : :: : : : .: :: :: ::.::.::: : : : :... :
CCDS76 IPGLPGIPGTRGLKGIPGSTGKMGPSGRAGTPGEKGDRGNPGPVGIPSPRRP-MSNLWLK
910 920 930 940 950 960
1000 1010 1020 1030 1040 1050
pF1KB9 GEKGDEGPMGLKGYLGAKGIQGMPGIPGLSGIPGLPGRPGHIKGVKGDIGVPGIPGLPGF
:.::..: : .:. : .: .: : :: :.:: :: :: ::::.: : ::. :. :.
CCDS76 GDKGSQGSAGSNGFPGPRGDKGEAGRPGPPGLPGAPGLPGIIKGVSGKPGPPGFMGIRGL
970 980 990 1000 1010 1020
1060 1070 1080 1090 1100 1110
pF1KB9 PGVAGPPGITGFPGFIGSRGDKGAPGRAGLYGEIGATGDFGDIGDTINLPGRPGLKGERG
::. : :::::::. : :..: : :: : : : :: :.:... : :: ::. :
CCDS76 PGLKGSSGITGFPGMPGESGSQGIRGSPGLPGASGLPGLKGDNGQTVEISGSPGPKGQPG
1030 1040 1050 1060 1070 1080
1120 1130 1140 1150 1160 1170
pF1KB9 TTGIPGLKGFFGEKGTEGDIGFPGITGVTGVQGPPGLKGQTGFPGLTGPPGSQGELGRIG
.:. : :: . : :.::::: : .: :..:..:.:: : :: : :. :
CCDS76 ESGFKGTKG---RDGLIGNIGFPGNK---GEDGKVGVSGDVGLPGAPGFPGVAGMRGEPG
1090 1100 1110 1120 1130 1140
1180 1190 1200 1210 1220 1230
pF1KB9 LPGGKGDDGWPGAPGLPGFPGLRGIRGLHGLPGTKGFPGSPGSDIHGDPGFPGPPGERGD
:::..: .: : : ::. : .: :. : :: :. :.::: ::.:
CCDS76 LPGSSGHQGAIGPLGSPGLIGPKG-------PSITGVPG-PA-------GLPGPKGEKGY
1150 1160 1170 1180
1240 1250 1260 1270 1280 1290
pF1KB9 PGEANTLPGPVGVPGQKGDQGAPGERGPPGSPGLQGFPGITPPSNISGAPGDKGAPGIFG
:: . :: :. :::::.: :: .:: : :: :::. :: :.: ::: : ::. :
CCDS76 PGIGIGAPGKPGLRGQKGDRGFPGLQGPAGLPGA---PGISLPSLIAGQPGDPGRPGLDG
1190 1200 1210 1220 1230 1240
1300 1310 1320 1330 1340 1350
pF1KB9 LKGYRGPPGPPGSAALPGSKGDTGNPGAPGTPGTKGWAGDSGPQGRPGVFGLPGEKGPRG
.: :: :::: . ...::::.:: :: :: :: :: :: :: ::::: : .:
CCDS76 ERGRPGPAGPPGPPGPSSNQGDTGDPGFPGIPGPKGPKGD---QGIPGFSGLPGELGLKG
1250 1260 1270 1280 1290 1300
1360 1370 1380 1390 1400
pF1KB9 EQGFMGNTGPTG-AVGDRGPKGPKGDPGFPGAPGTVGAPGIAGIPQKIAVQPGTVGPQGR
.:..:. : : : . . : :: : ::. : :: .: :: : : :: ::
CCDS76 SSGLQGDPGQTPTAEAVQVPPGPLGLPGIDGIPGLTGDPGAQG-P---------VGLQGS
1310 1320 1330 1340 1350
1410 1420 1430 1440 1450 1460
pF1KB9 RGPPGAPGEMGPQGPPGEPGFRGAPGKAGPQGRGGVSAVPGFRGDEGPIGHQGPIGQEGA
.: :: ::. ::.: :: :: : :: .::. ::: : :::
CCDS76 KGLPGIPGKDGPSGLPGPPGALGDPG------------LPGL---------QGPPGFEGA
1360 1370 1380
1470 1480 1490 1500 1510 1520
pF1KB9 PGRPGSPGLPGMPGRSVSIGYLLVKHSQTDQEPMCPVGMNKLWSGYSLLYFEGQEKAHNQ
::. : :.:::::.:. .:: ::::::..: : ::.::..:: :::::. :::::::::
CCDS76 PGQQGPFGMPGMPGQSMRVGYTLVKHSQSEQVPPCPIGMSQLWVGYSLLFVEGQEKAHNQ
1390 1400 1410 1420 1430 1440
1530 1540 1550 1560 1570 1580
pF1KB9 DLGLAGSCLARFSTMPFLYCNPGDVCYYASRNDKSYWLSTTAPLPMMPVAEDEIKPYISR
:::.::::: :::::::.::: ..::.:: :::::::::::::.:::::.. .: ::::
CCDS76 DLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMPVSQTQIPQYISR
1450 1460 1470 1480 1490 1500
1590 1600 1610 1620 1630 1640
pF1KB9 CSVCEAPAIAIAVHSQDVSIPHCPAGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLED
:::::::. ::::::::..::.:: :::::::::::::::::: ::::::::::::::::
CCDS76 CSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLED
1510 1520 1530 1540 1550 1560
1650 1660 1670 1680 1690 1700
pF1KB9 FRATPFIECNGGRGTCHYYANKYSFWLTTIPE-QSFQGSPSADTLKAGLIRTHISRCQVC
:::::::::.:.::::::.::::::::::. : :.: : ..::::: ..:..::::::
CCDS76 FRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFGELPVSETLKAGQLHTRVSRCQVC
1570 1580 1590 1600 1610 1620
1710
pF1KB9 MKNL
::.:
CCDS76 MKSL
1630
>>CCDS2773.1 COL7A1 gene_id:1294|Hs108|chr3 (2944 aa)
initn: 757 init1: 757 opt: 3188 Z-score: 1359.8 bits: 265.5 E(32554): 2e-69
Smith-Waterman score: 3736; 42.9% identity (54.6% similar) in 1594 aa overlap (51-1483:1247-2763)
30 40 50 60 70 80
pF1KB9 TVTVGFLAQSVLAGVKKFDVPCGGRDCSGGCQCYPEKGGRGQPGPVGPQGYNGPPGLQGF
: : :: .:.:: .: .: ::::
CCDS27 DDGPSLDQAVSGLATALCQASFTTQPRPEPCPVYCPKGQKGEPGEMGLRGQVGPPGD---
1220 1230 1240 1250 1260 1270
90 100 110 120 130 140
pF1KB9 PGLQGRKGDKGERGAPGVTGPKGDVGARGVSGFPGADGIPGHPGQGGPRGRPGYDGCNGT
::: :: : ::: :: :.. :.: ::::::: :: ::..: : :: : .:.
CCDS27 PGLPGRTG------APGPQGPPGSATAKGERGFPGADGRPGSPGRAGNPGTPGAPGLKGS
1280 1290 1300 1310 1320
150 160 170 180 190
pF1KB9 QGDSGPQGPPGSEGFTGPPGPQGPKGQKGEPYALPKEERDRYRGEPGEPG-LVGFQGPPG
: ::.: :: .: :.:::: ::: :: ..: .:: :
CCDS27 PGLPGPRGDPGERG------PRGPKG------------------EPGAPGQVIGGEGP-G
1330 1340 1350 1360
200 210 220 230 240 250
pF1KB9 RPGHVGQMGPVGAPGRPGPPGPPGPKGQQGNRGLGFYGVKGEKGDVGQPGPN--GI-PSD
::. :. :: : :: :: : :::.: : : .. : ::..:. : :::. :: :..
CCDS27 LPGRKGDPGPSGPPGPRGPLGDPGPRGPPGLPGTAMKGDKGDRGERGPPGPGEGGIAPGE
1370 1380 1390 1400 1410 1420
260 270 280 290 300 310
pF1KB9 TLHPIIAPTGVTFHPDQYKGEKGSEGEPGIRGISLKGEEGIMGFPGLRGYPGLSGEKGSP
: :. : : .: : :: .: . .:.: :.:: : :: .: .: :
CCDS27 PGLP-----GLPGSP----GPQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPGEQGPRGPP
1430 1440 1450 1460 1470
320 330 340 350 360 370
pF1KB9 GQKGSRGLDGYQGPDGPRGPKGEAGDPGPPG---LPAYSPHPSLAKGARGDPGFPGAQGE
: : .: :. :: : : ::: : ::: : ::. . .:. ::: .: :: : :::
CCDS27 GAIGPKGDRGFPGPLGEAGEKGERGPPGPAGSRGLPGVAGRPG-AKGPEGPPGPTGRQGE
1480 1490 1500 1510 1520 1530
380 390 400 410 420
pF1KB9 PGSQGEPGDPGLPGPPGLSIGDGDQRRGLPGEMGPKGFIG---DPGIPALY-GGPPGPDG
: :.::::.. :: ... ..: : ::.: : . : :.: : ::: :
CCDS27 KGEPGRPGDPAVVGP---AVAGPKGEKGDVGPAGPRGATGVQGERGPPGLVLPGDPGPKG
1540 1550 1560 1570 1580
430 440 450 460 470 480
pF1KB9 KRGPPGPPGLPGPPGPDGFLFGLKGAKGRAGFPGLPGSPGARGPKGWKGDAGECRCTEGD
: :: :: : :: : .: :. : :: :: :: ::.: :..:: .::
CCDS27 DPGDRGPIGLTGRAGPPG----DSGPPGEKGDPGRPGPPGPVGPRGRDGEVGE----KGD
1590 1600 1610 1620 1630 1640
490 500 510 520 530 540
pF1KB9 EAIKGLPGLPGPKGFAGINGEPG------RKGDKGDPGQHGLPGFPGLKGVPGNIGAPGP
:. : ::::: : :. : :: .:::.::::. : : :: .: :. : :::
CCDS27 EGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGP
1650 1660 1670 1680 1690 1700
550 560 570 580 590
pF1KB9 KGAKG---DS----RTITTKGERGQPGVPGVPGMKGDDGSPGRDGLDGFPGLPGPPGD-G
: : :. : :.::: : : : : :.::. :..:: : ::: :: :
CCDS27 PGPPGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPG
1710 1720 1730 1740 1750 1760
600 610 620 630 640 650
pF1KB9 IKGPPGDPGYPGIPGTKGTPGEMGPPGLGLP----GLKGQRGFPGDAGLPGPPGFLGPPG
..:: :. : : :: : : : :: . : : :. : :: :::: : : ::
CCDS27 VRGPAGEKGDRGPPGLDGRSGLDGKPGAAGPSGPNGAAGKAGDPGRDGLPGLRGEQGLPG
1770 1780 1790 1800 1810 1820
660 670 680 690 700 710
pF1KB9 PAGTPGQIDCDTDVKRAVGGDRQEAIQPGCIAGPKGLPGLPGPPGPTGAKGLRGIPGFAG
:.: :: . : : .:: . : .: :: :: : : :: : : :
CCDS27 PSGPPG-----------LPGKPGEDGKPG-LNGKNGEPGDPGEDGRKGEKGDSGASGREG
1830 1840 1850 1860
720 730 740 750 760
pF1KB9 ADGGPGPRGLPGDAGREGFPGPPGFIGPRGSKGAVGLPG---PDGSPGPIGLPGPDGPPG
:: : :: :: : .: :: :: .:: : .: :.:: : :. : : : .: ::
CCDS27 RDGPKGERGAPGILGPQGPPGLPGPVGPPG-QGFPGVPGGTGPKGDRGETGSKGEQGLPG
1870 1880 1890 1900 1910 1920
770 780 790
pF1KB9 ERGL---PG---------EVLGAQ-------------------P------GPRGDAGVPG
:::: :: :. : . : ::.::.: :
CCDS27 ERGLRGEPGSVPNVDRLLETAGIKASALREIVETWDESSGSFLPVPERRRGPKGDSGEQG
1930 1940 1950 1960 1970 1980
800 810 820 830 840
pF1KB9 QPGLKG---LPGDRGPPGFRGSQGMPGMPGLK-GQPGLPGPSGQPGLYGPPGLHGFPGAP
:: .: .::.:: : ::. : : ::: :. : ::::: : : ::. :.::
CCDS27 PPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIPGLPGRA
1990 2000 2010 2020 2030 2040
850 860 870 880 890
pF1KB9 GQEGPLGLPGIPGREGLPGDRGD------PGDTGAPGPVGMKG--LSGDRGDAGFTGEQG
: : : :: :..: :.::. :: :.::: : : .: :. :..::::
CCDS27 GGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPGLSGEQG
2050 2060 2070 2080 2090 2100
900 910 920 930 940 950
pF1KB9 HPGSPGFKGIDGMPGTPGLKGDRGSPGMDGFQGMPGLKGR---PGFPGSKGEAGFFGIPG
:: : :: : : : ::::: ::. : .: :: .:. ::.:: .: :: : ::
CCDS27 PPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPEGKPG
2110 2120 2130 2140 2150 2160
960 970 980 990 1000 1010
pF1KB9 LKGLAGEPGFKGSRGDPGPPGPPPVILP----GMKDIKGEKGDEGPMGLKGYLGAKGIQG
:.: : :: :..::::::: : . : : . .::: :. :: : .: : : :
CCDS27 LQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPG-RGLTGPTGAVG
2170 2180 2190 2200 2210 2220
1020 1030 1040 1050
pF1KB9 MPGIPGLSGI------PGLPGR---------PGH--IKGVKGDIGVPGIPGLPGFPGVAG
.:: :: ::. :::::. ::. .: :: : ::.:: ::.:: .:
CCDS27 LPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVG
2230 2240 2250 2260 2270 2280
1060 1070 1080 1090 1100
pF1KB9 P---PGITGFPG-----FIGSRGDKGAPGR-AG-LYGEIGATGDFGDIGDTINLPGRPGL
: :: :: :: . :..:.::::: :: : :: :: :: : ::: :
CCDS27 PKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRG-------LPGPRGE
2290 2300 2310 2320 2330 2340
1110 1120 1130 1140 1150 1160
pF1KB9 KGERGTTGIPGLKGFFGEKGTEGDIGF---PGI--TGVTGVQGPPGLKGQTGFPGLTGPP
::: : .: :: : :.::. : :: ::. : : ::::.::. :.::: : :
CCDS27 KGEAGRAGEPGDPGEDGQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGAP
2350 2360 2370 2380 2390 2400
1170 1180 1190 1200 1210
pF1KB9 GSQGELGRIGLPGGKGDDGWPGAPGLPGFPGLRGIRGLHGLPGTKGFPGSPGSDI----H
: : :. : : :. : : :: : :: .:: : : :: : : ::.. .
CCDS27 GVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGIPGPLGPPGPPGSVGPPGASGLKGDK
2410 2420 2430 2440 2450 2460
1220 1230 1240 1250 1260
pF1KB9 GDPG--FPGPPGERGDPG--EANTLPG---PVGVPGQKGDQGAPGERGPPGSPGLQGFPG
:::: .::: ::::.:: . :: : :. : :..: ::.: :: ::.: :
CCDS27 GDPGVGLPGPRGERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKG
2470 2480 2490 2500 2510 2520
1270 1280 1290 1300 1310
pF1KB9 ----ITPPSNISGAPGDKGAPGIFGLKGYRGP------PGPPGSAALPGSKGDTGNPG--
: : . :: :: : : :: : .:: :: :: . ::.::..: ::
CCDS27 DSAVILGPPGPRGAKGDMGERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLR
2530 2540 2550 2560 2570 2580
1320 1330 1340 1350 1360
pF1KB9 ---AP-GTPGTKGWAGDSGPQGRPGVFGLPGEKG------PRG---EQGFMGNTGPTGAV
.: : ::. : :: : :. :: :. :::: ::: :.: : : :
CCDS27 GLLGPQGQPGAAGIPGDPGSPGKDGVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEK
2590 2600 2610 2620 2630 2640
1370 1380 1390 1400 1410 1420
pF1KB9 GDRGPKGPKGDPGFPGAPGTVGAPGIAGIPQKIAVQPGTVGPQGRRGPPGAPGEMGPQGP
::.: :: : ::. : : .: ::. : . . : .::.: :: : :: : ::
CCDS27 GDKGEAGPPGRPGLAGHKGEMGEPGVPG-QSGAPGKEGLIGPKGDRGFDGQPGPKGDQGE
2650 2660 2670 2680 2690
1430 1440 1450 1460 1470
pF1KB9 PGE---PGFRGAPGKAGPQGRGGVSAVPGFRGDEGPIGHQGPIGQEGAPGRP--GSPGLP
:: ::. : :: .: .: .: . :: : .:: : :: :..: ::. :.::.:
CCDS27 KGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPPGERVVGAPGVP
2700 2710 2720 2730 2740 2750
1480 1490 1500 1510 1520 1530
pF1KB9 GMPGRSVSIGYLLVKHSQTDQEPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLA
: ::
CCDS27 GAPGERGEQGRPGPAGPRGEKGEAALTEDDIRGFVRQEMSQHCACQGQFIASGSRPLPSY
2760 2770 2780 2790 2800 2810
>>CCDS42829.1 COL4A3 gene_id:1285|Hs108|chr2 (1670 aa)
initn: 2009 init1: 927 opt: 3122 Z-score: 1335.1 bits: 260.1 E(32554): 4.8e-68
Smith-Waterman score: 4844; 47.0% identity (60.5% similar) in 1664 aa overlap (100-1710:88-1667)
70 80 90 100 110 120
pF1KB9 GYNGPPGLQGFPGLQGRKGDKGERGAPGVTGPKGDVGARGVSGFPGADGIPGHPGQGGPR
: :: : :. :: :. :.:: ::. ::
CCDS42 GSPGQKGFTGPEGLPGPQGPKGFPGLPGLTGSKGVRGISGLPGFSGSPGLPGTPGNTGPY
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB9 GRPGYDGCNGTQGDSGPQGPPGSEGFTGPPGPQGPKGQKGEPYALPKEERDRYRGEPGEP
: : ::.:..:..: : ::. :. : :: : ::::: : : : .:.:: :
CCDS42 GLVGVPGCSGSKGEQGFPGLPGTLGYPGIPGAAGLKGQKGAPAKEEDIELDA-KGDPGLP
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB9 GLVGFQG---PPGRPGHVGQMGPVGAPGRPGPPGPPGPKGQQGNRGLGFYGVKGEKGDVG
: : :: ::: :: :: :: : : :: :: ::::..:.: .: : .: :: .:
CCDS42 GAPGPQGLPGPPGFPGPVGPPGPPGFFGFPGAMGPRGPKGHMGERVIGHKGERGVKGLTG
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB9 QPGPNGIPSDTLHPIIAPTGVTFHPDQYKGEKGSEGEPGIRGIS-LKGE-----EGIMGF
::: :. .. . .: . : . ::.::. :::: : : : :: .: :
CCDS42 PPGP---PGTVIVTLTGPDNRTDLKGE-KGDKGAMGEPGPPGPSGLPGESYGSEKGAPGD
240 250 260 270 280 290
310 320 330 340 350
pF1KB9 PGLRGYPGLSGEKGSPGQKGSRGLDGYQGPDGPRGPKGEAGDPGPPGL--PAYSPHPSLA
:::.: :: .: : ::..: .: :. : : : ::. :: ::::. :.
CCDS42 PGLQGKPGKDGVPGFPGSEGVKGNRGFPGLMGEDGIKGQKGDIGPPGFRGPTEYYDTYQE
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB9 KGARGDPGFPGAQGEPGSQGEPGDPGLPGPPGLSIGDGDQRRGLPGEMGPKGFIGDPGIP
:: .: :: :: .: : :: : ::.:: :: : : :: : :: : ::
CCDS42 KGDEGTPGPPGPRGARGPQGPSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKGERGRPGKD
360 370 380 390 400 410
420 430 440 450 460 470
pF1KB9 ALYGGPPGPDGKRGPPGPPGLPGPPGPDGFLFGLKGAKGRAGFPGLPGSPGARGPKGWKG
:. : :: : : :: :: :::::: : . :: : :.:: :::: : : ::
CCDS42 AM--GTPGSPGCAGSPGLPGSPGPPGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKG
420 430 440 450 460 470
480 490 500 510 520 530
pF1KB9 DAG----ECRCTEGDEAIKGLPGLPGPKGFAGINGEPGRKGDKGDPGQHGLPGFPGLKGV
. : .: : .. ::::: : ::. : .: : ::. :.::. :::::::.
CCDS42 EPGLLCTQCPYIPGPPGLPGLPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFPGF---
480 490 500 510 520
540 550 560 570 580 590
pF1KB9 PGNIGAPGPKGAKGDSRTITTKGERGQPGVPGVPGMKGDDGSPGRDGLDGFPG---LPGP
:: : :: :: ::. : . : :: :::: ::..:. : : ::. : :: ::::
CCDS42 PGAQGDPGLKGEKGE----TLQPE-GQVGVPGDPGLRGQPGRKGLDGIPGTPGVKGLPGP
530 540 550 560 570 580
600 610 620 630 640
pF1KB9 PGD----GIKGPPGDPGYPGIPGTKGTPGEMGPPGLGLPGLKGQRGFPGDAGLPGPPGFL
:. : :: : :: :: ::. : : :::: : : .:. :. : :.:: :
CCDS42 KGELALSGEKGDQGPPGDPGSPGSPGPAGPAGPPGYG-P--QGEPGLQGTQGVPGAP---
590 600 610 620 630
650 660 670 680 690 700
pF1KB9 GPPGPAGTPGQIDCDTDVKRAVGGDRQEAIQPGCIAGPKGLPGLPGPPGPTGAKGLRGIP
:::: :: :... .: : : :: : :: :: ::: : :. :
CCDS42 GPPGEAGPRGELSVSTPV-------------P----GPPGPPGPPGHPGPQGPPGIPGSL
640 650 660 670
710 720 730 740 750 760
pF1KB9 GFAGADGGPGPRGLPGDAGREGFPGPPGFIGPRGSKGAVGLPGPDGSPGPIGLPGPDGPP
: : : ::: : :: : ::::::: :.:..: .:: :: .: :: : :
CCDS42 GKCGDPGLPGPDGEPGIPGI-GFPGPPG---PKGDQG---FPGTKGS---LGCPGKMGEP
680 690 700 710 720
770 780 790 800 810 820
pF1KB9 GERGLPGEVLGAQPGPRGDAGV--PGQPGLKGLPGDRGPPGFRGSQGMPGMPGLKGQPG-
: : :: :: .:. .: :: :: :.::.:: : .: :.::.::: : ::
CCDS42 GLPGKPG-----LPGAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPGTPGN
730 740 750 760 770 780
830 840 850 860 870 880
pF1KB9 --LPGPSGQPGLYGPPGLHGFPG--APGQEGPLGLPGIPGREGLPGDRGDPGDTGAPGPV
: :: :.:: :::: .: :: : .: ::::. : .: : :: : : ::
CCDS42 EGLDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRRGKTGPKGDPGIP
790 800 810 820 830 840
890 900 910 920 930
pF1KB9 GM--KGLSGDRGDAGFTGEQGHPGSPGFKGIDGMPGTPGLKGDRGSPGMDGFQGMPGLKG
:. .:. :. :. :. :.::. : : .: : :: : :. : :: :: : : :
CCDS42 GLDRSGFPGETGSPGIPGHQGEMGPLGQRGYPGNPGILGPPGEDGVIGMMGFPGAIGPPG
850 860 870 880 890 900
940 950 960 970 980 990
pF1KB9 RPGFPGSKGEAGFFGIPGLKGLAGEPGFKGSRGDPGPPGPPPVILPGMKDIKGEKGDEGP
:: ::. :. : ::::.:: : :: :: .:: : ::: . . . :.::. :
CCDS42 PPGNPGTPGQRGSPGIPGVKGQRGTPGAKGEQGDKGNPGPSEI-----SHVIGDKGEPGL
910 920 930 940 950
1000 1010 1020 1030 1040 1050
pF1KB9 MGLKGYLGAKGIQGMPGIPGLSGIPGLPGRPGHIKGVKGDIGVPGIPGLPGFPGVAGPPG
:. : : :: .:.::.:::.:. :::: :. : .::.: : :: ::. :. : :
CCDS42 KGFAGNPGEKGNRGVPGMPGLKGLKGLPG-PAGPPGPRGDLGSTGNPGEPGLRGIPGSMG
960 970 980 990 1000 1010
1060 1070 1080 1090 1100 1110
pF1KB9 ITGFPGFIGSRGDKGAPGRAGLYGEIGATGDFGDIGDTINLPG-RPGLKGERGTTGIPGL
:.:: :.:: : ::::: : : : :: :. : ::: : : :.::
CCDS42 NMGMPGSKGKRGTLGFPGRAGRPGLPGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPG-
1020 1030 1040 1050 1060 1070
1120 1130 1140 1150 1160 1170
pF1KB9 KGFFGEKGTEGDIGFPGITGVTGVQGPPGLKGQTGFPGLTGPPGSQGELGRIGLPGGKGD
. : .:..: :: : : :: : :. : ::: : :: .:.:: :. : :
CCDS42 -----DMGKKGEMGQPGPPGHLGPAGPEGAPGSPGSPGLPGKPGPHGDLGFKGIKGLLGP
1080 1090 1100 1110 1120 1130
1180 1190 1200 1210 1220 1230
pF1KB9 DGWPGAPGLPGFPGLRGIRGLHGLPGTKGFPGSPGSDIHGDPGF-PGPPGERGDPGEANT
: : :::::::: : :..: : :.:: : .:. :. .::: ::.:: ..
CCDS42 PGIRGPPGLPGFPGSPGPMGIRGDQGRDGIPGPAGE--KGETGLLRAPPGPRGNPGAQGA
1140 1150 1160 1170 1180 1190
1240 1250 1260 1270 1280 1290
pF1KB9 -----LPGPVGVPGQKGDQGAPGERGPPGSPGLQGFPGITPPSNISGAPGDKGAPGIFGL
:: :.::.:: .: : ::: : :. : ::. : . : : :..: :: :
CCDS42 KGDRGAPGFPGLPGRKGAMGDAGPRGPTGIEGFPGPPGL-PGAIIPGQTGNRGPPGSRGS
1200 1210 1220 1230 1240
1300 1310 1320 1330 1340 1350
pF1KB9 KGYRGPPGPPGSAALPGSKGDTGNPGAPGTPGTKGWAGDSGPQGRPGVFGLPGEKGPRGE
: :::::::: .. : ::: :. : :: : : ::: :: :: :. : :: ::::.
CCDS42 PGAPGPPGPPGSHVI-GIKGDKGSMGHPGPKGPPGTAGDMGPPGRLGAPGTPGLPGPRGD
1250 1260 1270 1280 1290 1300
1360 1370 1380 1390
pF1KB9 QGFMG---------NTGPTGAVGDRGPKGPKGDPGFPGAPGT---VGAPGIAGIPQKIAV
::.: : : :..: :: :::: :: : ::: .. :: : :
CCDS42 PGFQGFPGVKGEKGNPGFLGSIGPPGPIGPKGPPGVRGDPGTLKIISLPGSPGPPGT---
1310 1320 1330 1340 1350 1360
1400 1410 1420 1430 1440 1450
pF1KB9 QPGTVGPQGRRGPPGAPGEMGPQGPPGEPGFRGAPGKAGPQGRGGVSAVPGFRGDEGPIG
:: : ::. :::: ::..:: :: :.:: : :: :: :. .:..: :
CCDS42 -PGEPGMQGEPGPPGPPGNLGPCGPRGKPGKDGKPGTPGPAGE---------KGNKGSKG
1370 1380 1390 1400 1410
1460 1470 1480 1490 1500 1510
pF1KB9 HQGPIGQEGAPGRPGSPGLPGMPGRSVSIGYLLVKHSQTDQEPMCPVGMNKLWSGYSLLY
. :: :..: :: :. : : :. .. :.....:::: : :: : :.::.:.:.
CCDS42 EPGPAGSDGLPGLKGKRGDSGSPATWTTRGFVFTRHSQTTAIPSCPEGTVPLYSGFSFLF
1420 1430 1440 1450 1460 1470
1520 1530 1540 1550 1560 1570
pF1KB9 FEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASRNDKSYWLSTTA--PLPMMP
.:...::.:::: :::: ::.:::::.:: .::: .::::: :::::: : :. : :
CCDS42 VQGNQRAHGQDLGTLGSCLQRFTTMPFLFCNVNDVCNFASRNDYSYWLSTPALMPMNMAP
1480 1490 1500 1510 1520 1530
1580 1590 1600 1610 1620 1630
pF1KB9 VAEDEIKPYISRCSVCEAPAIAIAVHSQDVSIPHCPAGWRSLWIGYSFLMHTAAGDEGGG
.. ..::::::.:::.:::::::::: ..:: :: :: ::: :.::.: :.::.:: :
CCDS42 ITGRALEPYISRCTVCEGPAIAIAVHSQTTDIPPCPHGWISLWKGFSFIMFTSAGSEGTG
1540 1550 1560 1570 1580 1590
1640 1650 1660 1670 1680 1690
pF1KB9 QSLVSPGSCLEDFRATPFIECNGGRGTCHYYANKYSFWLTTI-PEQSFQGSPSADTLKAG
:.:.:::::::.:::.::.::.: ::::.::.:.:::::... ::. :. .: .:.:::
CCDS42 QALASPGSCLEEFRASPFLECHG-RGTCNYYSNSYSFWLASLNPERMFR-KPIPSTVKAG
1600 1610 1620 1630 1640 1650
1700 1710
pF1KB9 LIRTHISRCQVCMKNL
.. :::::::::
CCDS42 ELEKIISRCQVCMKKRH
1660 1670
1712 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 22:56:27 2016 done: Thu Nov 3 22:56:28 2016
Total Scan time: 6.720 Total Display time: 1.470
Function used was FASTA [36.3.4 Apr, 2011]