Result of FASTA (ccds) for pF1KB9027
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9027, 239 aa
  1>>>pF1KB9027 239 - 239 aa - 239 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.9740+/-0.000823; mu= 16.5893+/- 0.049
 mean_var=70.0867+/-14.741, 0's: 0 Z-trim(107.8): 16  B-trim: 527 in 1/48
 Lambda= 0.153199
 statistics sampled from 9792 (9807) to 9792 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.674), E-opt: 0.2 (0.301), width:  16
 Scan time:  2.200

The best scores are:                                      opt bits E(32554)
CCDS11073.1 DERL2 gene_id:51009|Hs108|chr17        ( 239) 1640 371.2 3.5e-103
CCDS33615.1 DERL3 gene_id:91319|Hs108|chr22        ( 235) 1272 289.8   1e-78
CCDS42986.1 DERL3 gene_id:91319|Hs108|chr22        ( 205) 1158 264.6 3.6e-71
CCDS46672.1 DERL3 gene_id:91319|Hs108|chr22        ( 239) 1158 264.6 4.1e-71
CCDS6337.1 DERL1 gene_id:79139|Hs108|chr8          ( 251)  487 116.3 1.9e-26
CCDS47915.1 DERL1 gene_id:79139|Hs108|chr8         ( 231)  416 100.6 9.3e-22
CCDS76927.1 DERL2 gene_id:51009|Hs108|chr17        (  74)  355 86.7 4.5e-18
CCDS83319.1 DERL1 gene_id:79139|Hs108|chr8         ( 151)  250 63.8 7.4e-11


>>CCDS11073.1 DERL2 gene_id:51009|Hs108|chr17             (239 aa)
 initn: 1640 init1: 1640 opt: 1640  Z-score: 1966.0  bits: 371.2 E(32554): 3.5e-103
Smith-Waterman score: 1640; 100.0% identity (100.0% similar) in 239 aa overlap (1-239:1-239)

               10        20        30        40        50        60
pF1KB9 MAYQSLRLEYLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MAYQSLRLEYLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 FLFFGPVGFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 FLFFGPVGFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 GQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 GQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGH
              130       140       150       160       170       180

              190       200       210       220       230         
pF1KB9 IYFFLEDVFPNQPGGIRILKTPSILKAIFDTPDEDPNYNPLPEERPGGFAWGEGQRLGG
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 IYFFLEDVFPNQPGGIRILKTPSILKAIFDTPDEDPNYNPLPEERPGGFAWGEGQRLGG
              190       200       210       220       230         

>>CCDS33615.1 DERL3 gene_id:91319|Hs108|chr22             (235 aa)
 initn: 1272 init1: 1272 opt: 1272  Z-score: 1526.5  bits: 289.8 E(32554): 1e-78
Smith-Waterman score: 1272; 78.0% identity (94.3% similar) in 227 aa overlap (1-227:1-227)

               10        20        30        40        50        60
pF1KB9 MAYQSLRLEYLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITN
       ::.:.:  :.::.: :.::::.:::::::::::::..::::::::.:.:..::.:::.::
CCDS33 MAWQGLAAEFLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 FLFFGPVGFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFL
       ::::::.::.:.:::.:..:::::::::::::::::::::::::: ::::.::. :: ::
CCDS33 FLFFGPLGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 GQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGH
       :::.  :::::::::.: ::.::::::.::::::::.::::::::::::.::::::::::
CCDS33 GQALMAMLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIAVGH
              130       140       150       160       170       180

              190       200       210       220       230         
pF1KB9 IYFFLEDVFPNQPGGIRILKTPSILKAIFDTPDEDPNYNPLPEERPGGFAWGEGQRLGG
       ::.:::::::::::: :.:.::..:: ..:.: ::::: :::::.::            
CCDS33 IYYFLEDVFPNQPGGKRLLQTPGFLKLLLDAPAEDPNYLPLPEEQPGPHLPPPQQ    
              190       200       210       220       230         

>>CCDS42986.1 DERL3 gene_id:91319|Hs108|chr22             (205 aa)
 initn: 1185 init1: 1158 opt: 1158  Z-score: 1391.1  bits: 264.6 E(32554): 3.6e-71
Smith-Waterman score: 1158; 79.0% identity (95.1% similar) in 205 aa overlap (1-205:1-205)

               10        20        30        40        50        60
pF1KB9 MAYQSLRLEYLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITN
       ::.:.:  :.::.: :.::::.:::::::::::::..::::::::.:.:..::.:::.::
CCDS42 MAWQGLAAEFLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 FLFFGPVGFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFL
       ::::::.::.:.:::.:..:::::::::::::::::::::::::: ::::.::. :: ::
CCDS42 FLFFGPLGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 GQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGH
       :::.  :::::::::.: ::.::::::.::::::::.::::::::::::.::::::::::
CCDS42 GQALMAMLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIAVGH
              130       140       150       160       170       180

              190       200       210       220       230         
pF1KB9 IYFFLEDVFPNQPGGIRILKTPSILKAIFDTPDEDPNYNPLPEERPGGFAWGEGQRLGG
       ::.:::::::::::: :.:.::..:                                  
CCDS42 IYYFLEDVFPNQPGGKRLLQTPGFL                                  
              190       200                                       

>>CCDS46672.1 DERL3 gene_id:91319|Hs108|chr22             (239 aa)
 initn: 1158 init1: 1158 opt: 1158  Z-score: 1390.2  bits: 264.6 E(32554): 4.1e-71
Smith-Waterman score: 1158; 79.0% identity (95.1% similar) in 205 aa overlap (1-205:1-205)

               10        20        30        40        50        60
pF1KB9 MAYQSLRLEYLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITN
       ::.:.:  :.::.: :.::::.:::::::::::::..::::::::.:.:..::.:::.::
CCDS46 MAWQGLAAEFLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 FLFFGPVGFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFL
       ::::::.::.:.:::.:..:::::::::::::::::::::::::: ::::.::. :: ::
CCDS46 FLFFGPLGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 GQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGH
       :::.  :::::::::.: ::.::::::.::::::::.::::::::::::.::::::::::
CCDS46 GQALMAMLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIAVGH
              130       140       150       160       170       180

              190       200       210       220       230         
pF1KB9 IYFFLEDVFPNQPGGIRILKTPSILKAIFDTPDEDPNYNPLPEERPGGFAWGEGQRLGG
       ::.:::::::::::: :.:.::..:                                  
CCDS46 IYYFLEDVFPNQPGGKRLLQTPGFLGLQSSKAPAGSSLTIWTQQSQGGPGTAGELAAPS
              190       200       210       220       230         

>>CCDS6337.1 DERL1 gene_id:79139|Hs108|chr8               (251 aa)
 initn: 516 init1: 370 opt: 487  Z-score: 588.4  bits: 116.3 E(32554): 1.9e-26
Smith-Waterman score: 499; 35.5% identity (63.2% similar) in 242 aa overlap (10-238:8-249)

               10        20        30        40        50        60
pF1KB9 MAYQSLRLEYLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITN
                . .:: ..: . .: : .  . .: ::.:  :.. :: .. .::::: :: 
CCDS63   MSDIGDWFRSIPAITRYWFAATVAVPLVGKLGLISPAYLFLWPEAFLYRFQIWRPITA
                 10        20        30        40        50        

                  70        80        90       100       110       
pF1KB9 FLFF--GP-VGFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSL
        ..:  :: .:: .: :. :::.:   :: :.: :: ::..::.::. . ... :: ...
CCDS63 TFYFPVGPGTGFLYLVNLYFLYQYSTRLETGAFDGRPADYLFMLLFNWICIVITGLAMDM
       60        70        80        90       100       110        

       120       130       140       150       160       170       
pF1KB9 VFLGQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIA
        .:   . . ..:::.. :  . ..:.    :.: .::::..::. ..:.:.: .:.:  
CCDS63 QLLMIPLIMSVLYVWAQLNRDMIVSFWFGTRFKACYLPWVILGFNYIIGGSVINELIGNL
      120       130       140       150       160       170        

       180       190       200                 210       220       
pF1KB9 VGHIYFFLEDVFPNQPGGIRILKTPSILK----------AIFDTPDEDPNYNPLPEERPG
       :::.::::   .: . ::  .:.::..:           . : .:  .       .   :
CCDS63 VGHLYFFLMFRYPMDLGGRNFLSTPQFLYRWLPSRRGGVSGFGVPPASMRRAADQNGGGG
      180       190       200       210       220       230        

       230          
pF1KB9 GFAWGEGQRLGG 
          ::.: :::  
CCDS63 RHNWGQGFRLGDQ
      240       250 

>>CCDS47915.1 DERL1 gene_id:79139|Hs108|chr8              (231 aa)
 initn: 473 init1: 295 opt: 416  Z-score: 504.1  bits: 100.6 E(32554): 9.3e-22
Smith-Waterman score: 431; 33.2% identity (61.6% similar) in 232 aa overlap (10-238:8-229)

               10        20        30        40        50        60
pF1KB9 MAYQSLRLEYLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITN
                . .:: ..: . .: : .  . .: ::.:  :.. :: .. .::::: :: 
CCDS47   MSDIGDWFRSIPAITRYWFAATVAVPLVGKLGLISPAYLFLWPEAFLYRFQIWRPITA
                 10        20        30        40        50        

                  70        80        90       100       110       
pF1KB9 FLFF--GP-VGFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSL
        ..:  :: .:: .: :. :::.:   :: :.: :: ::..::.::. . ... :: ...
CCDS47 TFYFPVGPGTGFLYLVNLYFLYQYSTRLETGAFDGRPADYLFMLLFNWICIVITGLAMDM
       60        70        80        90       100       110        

       120       130       140       150       160       170       
pF1KB9 VFLGQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIA
        .:   . . ..:::.. :  . ..:.    :.: .::::..::. ..:.:  .:: :  
CCDS47 QLLMIPLIMSVLYVWAQLNRDMIVSFWFGTRFKACYLPWVILGFNYIIGGSYPMDLGGRN
      120       130       140       150       160       170        

       180       190       200       210       220       230       
pF1KB9 VGHIYFFLEDVFPNQPGGIRILKTPSILKAIFDTPDEDPNYNPLPEERPGGFAWGEGQRL
             ::   .:.. ::.  . .:    ..  . :.. .         :   ::.: ::
CCDS47 FLSTPQFLYRWLPSRRGGVSGFGVPP--ASMRRAADQNGG--------GGRHNWGQGFRL
      180       190       200         210               220        

          
pF1KB9 GG 
       :  
CCDS47 GDQ
      230 

>>CCDS76927.1 DERL2 gene_id:51009|Hs108|chr17             (74 aa)
 initn: 353 init1: 353 opt: 355  Z-score: 438.0  bits: 86.7 E(32554): 4.5e-18
Smith-Waterman score: 355; 88.9% identity (95.2% similar) in 63 aa overlap (1-63:1-62)

               10        20        30        40        50        60
pF1KB9 MAYQSLRLEYLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITN
       :::::::::::::::::::::::::::::::::::::::::::::::::::::. .: : 
CCDS76 MAYQSLRLEYLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQVLQLDT-
               10        20        30        40        50          

               70        80        90       100       110       120
pF1KB9 FLFFGPVGFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFL
       ..:                                                         
CCDS76 YIFSWKMYFPINLVE                                             
      60        70                                                 

>>CCDS83319.1 DERL1 gene_id:79139|Hs108|chr8              (151 aa)
 initn: 277 init1: 242 opt: 250  Z-score: 308.4  bits: 63.8 E(32554): 7.4e-11
Smith-Waterman score: 262; 31.5% identity (60.4% similar) in 149 aa overlap (100-238:1-149)

      70        80        90       100       110       120         
pF1KB9 NFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFLGQAFTIMLV
                                     :.::. . ... :: ... .:   . . ..
CCDS83                               MLLFNWICIVITGLAMDMQLLMIPLIMSVL
                                             10        20        30

     130       140       150       160       170       180         
pF1KB9 YVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGHIYFFLEDVF
       :::.. :  . ..:.    :.: .::::..::. ..:.:.: .:.:  :::.::::   .
CCDS83 YVWAQLNRDMIVSFWFGTRFKACYLPWVILGFNYIIGGSVINELIGNLVGHLYFFLMFRY
               40        50        60        70        80        90

     190       200                 210       220       230         
pF1KB9 PNQPGGIRILKTPSILK----------AIFDTPDEDPNYNPLPEERPGGFAWGEGQRLGG
       : . ::  .:.::..:           . : .:  .       .   :   ::.: ::: 
CCDS83 PMDLGGRNFLSTPQFLYRWLPSRRGGVSGFGVPPASMRRAADQNGGGGRHNWGQGFRLGD
              100       110       120       130       140       150

CCDS83 Q
        




239 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 22:58:05 2016 done: Thu Nov  3 22:58:05 2016
 Total Scan time:  2.200 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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