Result of FASTA (ccds) for
pF1KB9055
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9055, 978 aa
1>>>pF1KB9055 978 - 978 aa - 978 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.3661+/-0.000951; mu= 12.1373+/- 0.058
mean_var=119.6115+/-24.047, 0's: 0 Z-trim(107.9): 15 B-trim: 0 in 0/53
Lambda= 0.117270
statistics sampled from 9826 (9838) to 9826 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.637), E-opt: 0.2 (0.302), width: 16
Scan time: 4.850
The best scores are: opt bits E(32554)
CCDS5574.1 GTF2I gene_id:2969|Hs108|chr7 ( 978) 6456 1104.1 0
CCDS5575.1 GTF2I gene_id:2969|Hs108|chr7 ( 977) 6233 1066.3 0
CCDS5573.1 GTF2I gene_id:2969|Hs108|chr7 ( 998) 4822 827.6 0
CCDS47614.1 GTF2I gene_id:2969|Hs108|chr7 ( 957) 4587 787.8 0
CCDS64680.1 GTF2I gene_id:2969|Hs108|chr7 ( 274) 1777 312.2 9.2e-85
CCDS5576.1 GTF2IRD2 gene_id:84163|Hs108|chr7 ( 949) 1588 280.5 1.1e-74
CCDS34659.1 GTF2IRD2B gene_id:389524|Hs108|chr7 ( 949) 1587 280.3 1.3e-74
CCDS5571.1 GTF2IRD1 gene_id:9569|Hs108|chr7 ( 959) 624 117.4 1.4e-25
CCDS64682.1 GTF2IRD2 gene_id:84163|Hs108|chr7 ( 108) 451 87.7 1.4e-17
CCDS47613.1 GTF2IRD1 gene_id:9569|Hs108|chr7 ( 944) 355 71.8 7.1e-12
CCDS56492.1 GTF2IRD1 gene_id:9569|Hs108|chr7 ( 976) 355 71.9 7.3e-12
>>CCDS5574.1 GTF2I gene_id:2969|Hs108|chr7 (978 aa)
initn: 6456 init1: 6456 opt: 6456 Z-score: 5904.9 bits: 1104.1 E(32554): 0
Smith-Waterman score: 6456; 100.0% identity (100.0% similar) in 978 aa overlap (1-978:1-978)
10 20 30 40 50 60
pF1KB9 MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 SFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 EESEDPDYYQYNIQGSHHSSEGNEGTEMEVPAEDSTQHVPSETSEDPEVEVTIEDDDYSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 EESEDPDYYQYNIQGSHHSSEGNEGTEMEVPAEDSTQHVPSETSEDPEVEVTIEDDDYSP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 PSKRPKANELPQPPVPEPANAGKRKVREFNFEKWNARITDLRKQVEELFERKYAQAIKAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 PSKRPKANELPQPPVPEPANAGKRKVREFNFEKWNARITDLRKQVEELFERKYAQAIKAK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 GPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELLN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 STREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 STREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPN
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 DLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTEVTQPRTNTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 DLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTEVTQPRTNTPV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 KEDWNVRITKLRKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KEDWNVRITKLRKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRS
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB9 PTWFGIPRLERIVRGSNKIKFVVKKPELVISYLPPGMASKINTKALQSPKRPRSPGSNSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 PTWFGIPRLERIVRGSNKIKFVVKKPELVISYLPPGMASKINTKALQSPKRPRSPGSNSK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB9 VPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGREFSFEAWNAKITDLKQKVENL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGREFSFEAWNAKITDLKQKVENL
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB9 FNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 FNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAK
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB9 IKFIIKKPEMFETAIKESTSSKSPPRKINSSPNVNTTASGVEDLNIIQVTIPDDDNERLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 IKFIIKKPEMFETAIKESTSSKSPPRKINSSPNVNTTASGVEDLNIIQVTIPDDDNERLS
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB9 KVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSY
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB9 LEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQSESEGPVIQESAEPSQLEVPATEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQSESEGPVIQESAEPSQLEVPATEE
910 920 930 940 950 960
970
pF1KB9 IKETDGSSQIKQEPDPTW
::::::::::::::::::
CCDS55 IKETDGSSQIKQEPDPTW
970
>>CCDS5575.1 GTF2I gene_id:2969|Hs108|chr7 (977 aa)
initn: 6217 init1: 4582 opt: 6233 Z-score: 5701.0 bits: 1066.3 E(32554): 0
Smith-Waterman score: 6233; 97.0% identity (98.0% similar) in 979 aa overlap (1-978:1-977)
10 20 30 40 50 60
pF1KB9 MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 SFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK
190 200 210 220 230 240
250 260 270 280 290
pF1KB9 EESEDPDYYQYNIQ-GSHHSSEGNEGTEMEVPAEDSTQHVPSETSEDPEVEVTIEDDDYS
:::::::::::::: : .... .: . : . : : :: .: :.:: ::::::
CCDS55 EESEDPDYYQYNIQAGPSETDDVDEKQPLSKPLQGS--HHSSEGNEGTEMEVPAEDDDYS
250 260 270 280 290
300 310 320 330 340 350
pF1KB9 PPSKRPKANELPQPPVPEPANAGKRKVREFNFEKWNARITDLRKQVEELFERKYAQAIKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 PPSKRPKANELPQPPVPEPANAGKRKVREFNFEKWNARITDLRKQVEELFERKYAQAIKA
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB9 KGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELL
360 370 380 390 400 410
420 430 440 450 460 470
pF1KB9 NSTREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 NSTREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHP
420 430 440 450 460 470
480 490 500 510 520 530
pF1KB9 NDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTEVTQPRTNTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 NDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTEVTQPRTNTP
480 490 500 510 520 530
540 550 560 570 580 590
pF1KB9 VKEDWNVRITKLRKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VKEDWNVRITKLRKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFR
540 550 560 570 580 590
600 610 620 630 640 650
pF1KB9 SPTWFGIPRLERIVRGSNKIKFVVKKPELVISYLPPGMASKINTKALQSPKRPRSPGSNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SPTWFGIPRLERIVRGSNKIKFVVKKPELVISYLPPGMASKINTKALQSPKRPRSPGSNS
600 610 620 630 640 650
660 670 680 690 700 710
pF1KB9 KVPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGREFSFEAWNAKITDLKQKVEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KVPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGREFSFEAWNAKITDLKQKVEN
660 670 680 690 700 710
720 730 740 750 760 770
pF1KB9 LFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKA
720 730 740 750 760 770
780 790 800 810 820 830
pF1KB9 KIKFIIKKPEMFETAIKESTSSKSPPRKINSSPNVNTTASGVEDLNIIQVTIPDDDNERL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KIKFIIKKPEMFETAIKESTSSKSPPRKINSSPNVNTTASGVEDLNIIQVTIPDDDNERL
780 790 800 810 820 830
840 850 860 870 880 890
pF1KB9 SKVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SKVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPS
840 850 860 870 880 890
900 910 920 930 940 950
pF1KB9 YLEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQSESEGPVIQESAEPSQLEVPATE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 YLEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQSESEGPVIQESAEPSQLEVPATE
900 910 920 930 940 950
960 970
pF1KB9 EIKETDGSSQIKQEPDPTW
:::::::::::::::::::
CCDS55 EIKETDGSSQIKQEPDPTW
960 970
>>CCDS5573.1 GTF2I gene_id:2969|Hs108|chr7 (998 aa)
initn: 4816 init1: 4816 opt: 4822 Z-score: 4410.7 bits: 827.6 E(32554): 0
Smith-Waterman score: 6406; 98.0% identity (98.0% similar) in 998 aa overlap (1-978:1-998)
10 20 30 40 50 60
pF1KB9 MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 SFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK
190 200 210 220 230 240
250 260 270 280
pF1KB9 EESEDPDYYQYNIQ--------------------GSHHSSEGNEGTEMEVPAEDSTQHVP
:::::::::::::: ::::::::::::::::::::::::::
CCDS55 EESEDPDYYQYNIQAGPSETDDVDEKQPLSKPLQGSHHSSEGNEGTEMEVPAEDSTQHVP
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB9 SETSEDPEVEVTIEDDDYSPPSKRPKANELPQPPVPEPANAGKRKVREFNFEKWNARITD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SETSEDPEVEVTIEDDDYSPPSKRPKANELPQPPVPEPANAGKRKVREFNFEKWNARITD
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB9 LRKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LRKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLE
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB9 RILLAKERIRFVIKKHELLNSTREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RILLAKERIRFVIKKHELLNSTREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAE
430 440 450 460 470 480
470 480 490 500 510 520
pF1KB9 ALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 ALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKR
490 500 510 520 530 540
530 540 550 560 570 580
pF1KB9 PELLTHSTTEVTQPRTNTPVKEDWNVRITKLRKQVEEIFNLKFAQALGLTEAVKVPYPVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 PELLTHSTTEVTQPRTNTPVKEDWNVRITKLRKQVEEIFNLKFAQALGLTEAVKVPYPVF
550 560 570 580 590 600
590 600 610 620 630 640
pF1KB9 ESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFVVKKPELVISYLPPGMASK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 ESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFVVKKPELVISYLPPGMASK
610 620 630 640 650 660
650 660 670 680 690 700
pF1KB9 INTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 INTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGRE
670 680 690 700 710 720
710 720 730 740 750 760
pF1KB9 FSFEAWNAKITDLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 FSFEAWNAKITDLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPF
730 740 750 760 770 780
770 780 790 800 810 820
pF1KB9 RRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKESTSSKSPPRKINSSPNVNTTASG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKESTSSKSPPRKINSSPNVNTTASG
790 800 810 820 830 840
830 840 850 860 870 880
pF1KB9 VEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRKITIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRKITIN
850 860 870 880 890 900
890 900 910 920 930 940
pF1KB9 PGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQSESE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 PGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQSESE
910 920 930 940 950 960
950 960 970
pF1KB9 GPVIQESAEPSQLEVPATEEIKETDGSSQIKQEPDPTW
::::::::::::::::::::::::::::::::::::::
CCDS55 GPVIQESAEPSQLEVPATEEIKETDGSSQIKQEPDPTW
970 980 990
>>CCDS47614.1 GTF2I gene_id:2969|Hs108|chr7 (957 aa)
initn: 4582 init1: 4582 opt: 4587 Z-score: 4196.1 bits: 787.8 E(32554): 0
Smith-Waterman score: 6271; 97.9% identity (97.9% similar) in 978 aa overlap (1-978:1-957)
10 20 30 40 50 60
pF1KB9 MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 SFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 EESEDPDYYQYNIQGSHHSSEGNEGTEMEVPAEDSTQHVPSETSEDPEVEVTIEDDDYSP
:::::::::::::::::::::::::::::::::: :::::
CCDS47 EESEDPDYYQYNIQGSHHSSEGNEGTEMEVPAED---------------------DDYSP
250 260 270
310 320 330 340 350 360
pF1KB9 PSKRPKANELPQPPVPEPANAGKRKVREFNFEKWNARITDLRKQVEELFERKYAQAIKAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PSKRPKANELPQPPVPEPANAGKRKVREFNFEKWNARITDLRKQVEELFERKYAQAIKAK
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB9 GPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 GPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELLN
340 350 360 370 380 390
430 440 450 460 470 480
pF1KB9 STREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 STREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPN
400 410 420 430 440 450
490 500 510 520 530 540
pF1KB9 DLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTEVTQPRTNTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 DLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTEVTQPRTNTPV
460 470 480 490 500 510
550 560 570 580 590 600
pF1KB9 KEDWNVRITKLRKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KEDWNVRITKLRKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRS
520 530 540 550 560 570
610 620 630 640 650 660
pF1KB9 PTWFGIPRLERIVRGSNKIKFVVKKPELVISYLPPGMASKINTKALQSPKRPRSPGSNSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PTWFGIPRLERIVRGSNKIKFVVKKPELVISYLPPGMASKINTKALQSPKRPRSPGSNSK
580 590 600 610 620 630
670 680 690 700 710 720
pF1KB9 VPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGREFSFEAWNAKITDLKQKVENL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGREFSFEAWNAKITDLKQKVENL
640 650 660 670 680 690
730 740 750 760 770 780
pF1KB9 FNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 FNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAK
700 710 720 730 740 750
790 800 810 820 830 840
pF1KB9 IKFIIKKPEMFETAIKESTSSKSPPRKINSSPNVNTTASGVEDLNIIQVTIPDDDNERLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 IKFIIKKPEMFETAIKESTSSKSPPRKINSSPNVNTTASGVEDLNIIQVTIPDDDNERLS
760 770 780 790 800 810
850 860 870 880 890 900
pF1KB9 KVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSY
820 830 840 850 860 870
910 920 930 940 950 960
pF1KB9 LEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQSESEGPVIQESAEPSQLEVPATEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQSESEGPVIQESAEPSQLEVPATEE
880 890 900 910 920 930
970
pF1KB9 IKETDGSSQIKQEPDPTW
::::::::::::::::::
CCDS47 IKETDGSSQIKQEPDPTW
940 950
>>CCDS64680.1 GTF2I gene_id:2969|Hs108|chr7 (274 aa)
initn: 1777 init1: 1777 opt: 1777 Z-score: 1635.2 bits: 312.2 E(32554): 9.2e-85
Smith-Waterman score: 1777; 100.0% identity (100.0% similar) in 273 aa overlap (1-273:1-273)
10 20 30 40 50 60
pF1KB9 MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 SFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 SFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 EESEDPDYYQYNIQGSHHSSEGNEGTEMEVPAEDSTQHVPSETSEDPEVEVTIEDDDYSP
:::::::::::::::::::::::::::::::::
CCDS64 EESEDPDYYQYNIQGSHHSSEGNEGTEMEVPAEG
250 260 270
310 320 330 340 350 360
pF1KB9 PSKRPKANELPQPPVPEPANAGKRKVREFNFEKWNARITDLRKQVEELFERKYAQAIKAK
>>CCDS5576.1 GTF2IRD2 gene_id:84163|Hs108|chr7 (949 aa)
initn: 1904 init1: 934 opt: 1588 Z-score: 1454.1 bits: 280.5 E(32554): 1.1e-74
Smith-Waterman score: 1589; 45.3% identity (67.8% similar) in 653 aa overlap (1-642:1-629)
10 20 30 40 50 60
pF1KB9 MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE
:::::.::::::.: :::.:::::::.:::::::::::::::::::::::::::::::::
CCDS55 MAQVAVSTLPVEEESSSETRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF
:: ::::.: ::::::.:::: : . ..: .: :.: . : : :::.:::::
CCDS55 RGCAFVNARTDFQKDFAKYCVAEG-----LCEVKPPCPVNGMQVHSGETEILRKAVEDYF
70 80 90 100 110
130 140 150 160 170 180
pF1KB9 CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI
::::::::: ...::::::::::::::::::::::::::.::::::::::::::::::::
CCDS55 CFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGI
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB9 SFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK
::::.:::: :....:: :::::.:::.::. :::::.::::: :::::::. ::.::
CCDS55 SFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVK
180 190 200 210 220 230
250 260 270 280 290
pF1KB9 EESEDPDYYQYNIQGSHHSSEGNEGTEMEVPAEDSTQHVPSET-SEDPEVEVTIEDDDYS
.:::::.:::::.:::: :: .:: :::.: :::: :::: .::::.:: :: . :
CCDS55 KESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPEAEVKIEGNTNS
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB9 PPSKRPKAN--ELPQPPVPEPANAGKRKVREFNFEKWNARITDLRKQVEELFERKYAQAI
:. .: : : : .: : ..:: : .::.::..:: ::...::
CCDS55 SSVTNSAAGVEDLNIVQVTVPDN---EKERLSSIEK----IKQLREQVNDLFSRKFGEAI
300 310 320 330 340
360 370 380 390 400 410
pF1KB9 KAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKH-
. :: .:: . . . ..:.: :. :. :. : ..::: : : :.:.. .
CCDS55 GVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPL
350 360 370 380 390 400
420 430 440 450 460 470
pF1KB9 ---ELLNSTREDLQLDKPASGVKEEWYAR--ITKLRKMVDQLFCKKFAEALGSTEAKAVP
:: : .. ..:. . .:.: ....... :.::. . ....
CCDS55 PGLELSNVGKR--KIDQEGRVFQEKWERAYFFVEVQNIPTCLICKQ-SMSVSKEYNLRRH
410 420 430 440 450 460
480 490 500 510 520 530
pF1KB9 YQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTEV
:: ... : :.: . :. . . . . . .:. .. ..... .
CCDS55 YQTNHSKHYDQYMERM------RDEKLHELKKGLRKYLLGSSDTECPEQKQVFANPSP--
470 480 490 500 510
540 550 560 570 580
pF1KB9 TQPRTNTPVKEDWNVRITKLRKQVEEI--FNLKFAQALGLTEAVKVPYPVFESNPEFLYV
:: ::.. . :::.... . ... . . ....... . . .:
CCDS55 TQKSPVQPVEDLAGNLWEKLREKIRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVS
520 530 540 550 560 570
590 600 610 620 630 640
pF1KB9 EGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFVVKKPELVISYLPPGMASKINTKALQSP
: : . .:. . : : . :. .. ... . .: : : :.:.. :
CCDS55 EELLDTVPM-TGTKSGNEIFSRVEKSLKNFCIDWSKLVSVASTGTPAMVDANNGLVTKLK
580 590 600 610 620 630
650 660 670 680 690 700
pF1KB9 KRPRSPGSNSKVPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGREFSFEAWNAK
CCDS55 SRVATFCKGAELKSICCIIHPESLCAQKLKMDHVMDVVVKSVNWICSRGLNHSEFTTLLY
640 650 660 670 680 690
>>CCDS34659.1 GTF2IRD2B gene_id:389524|Hs108|chr7 (949 aa)
initn: 1904 init1: 934 opt: 1587 Z-score: 1453.1 bits: 280.3 E(32554): 1.3e-74
Smith-Waterman score: 1590; 45.5% identity (67.8% similar) in 655 aa overlap (1-642:1-629)
10 20 30 40 50 60
pF1KB9 MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE
:::::.::::::.: :::.:::::::.:::::::::::::::::::::::::::::::::
CCDS34 MAQVAVSTLPVEEESSSETRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF
:: ::::.: ::::::.:::: : . ..: .: :.: . : : :::.:::::
CCDS34 RGCAFVNARTDFQKDFAKYCVAEG-----LCEVKPPCPVNGMQVHSGETEILRKAVEDYF
70 80 90 100 110
130 140 150 160 170 180
pF1KB9 CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI
::::::::: ...::::::::::::::::::::::::::.::::::::::::::::::::
CCDS34 CFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGI
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB9 SFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK
::::.:::: :....:: :::::.:::.::. :::::.::::: :::::::. ::.::
CCDS34 SFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVK
180 190 200 210 220 230
250 260 270 280 290
pF1KB9 EESEDPDYYQYNIQGSHHSSEGNEGTEMEVPAEDSTQHVPSET-SEDPEVEVTIEDDDYS
.:::::.:::::.:::: :: .:: :::.: :::: :::: .::::.:: :: . :
CCDS34 KESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPEAEVKIEGNTNS
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB9 PPSKRPKAN--ELPQPPVPEPANAGKRKVREFNFEKWNARITDLRKQVEELFERKYAQAI
:. .: : : : .: : ..:: : .::.::..:: ::...::
CCDS34 SSVTNSAAGVEDLNIVQVTVPDN---EKERLSSIEK----IKQLREQVNDLFSRKFGEAI
300 310 320 330 340
360 370 380 390 400 410
pF1KB9 KAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKH-
. :: .:: . . . ..:.: :. :. :. : ..::: : : :.:.. .
CCDS34 GVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPL
350 360 370 380 390 400
420 430 440 450 460 470
pF1KB9 ---ELLNSTREDLQLDKPASGVKEEWYAR--ITKLRKMVDQLFCKKFAEALGSTEAKAVP
:: : .. ..:. . .:.: ....... :.::. . ....
CCDS34 PGLELSNVGKR--KIDQEGRVFQEKWERAYFFVEVQNIPTCLICKQ-SMSVSKEYNLRRH
410 420 430 440 450 460
480 490 500 510 520 530
pF1KB9 YQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTEV
:: ... : :.: . :. . . . . . .:. .. ..... .
CCDS34 YQTNHSKHYDQYTERM------RDEKLHELKKGLRKYLLGSSDTECPEQKQVFANPSP--
470 480 490 500 510
540 550 560 570 580
pF1KB9 TQPRTNTPVKEDWNVRITKLRKQVEEI--FNLKFAQALGLTEAVKVPYPVFESNPEFLYV
:: ::.. . :::.... . ... . . ....... . . .:
CCDS34 TQKSPVQPVEDLAGNLWEKLREKIRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVS
520 530 540 550 560 570
590 600 610 620 630 640
pF1KB9 EGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFVVKKPELV--ISYLPPGMASKINTKALQ
: : . .:. . : : . :. .. . :: .. .:: : :.:.. :
CCDS34 EELLDTVPM-TGTKSGNEIFLRVEKSLK--KFCINWSRLVSVASTGTPAMVDANNGLVTK
580 590 600 610 620 630
650 660 670 680 690 700
pF1KB9 SPKRPRSPGSNSKVPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGREFSFEAWN
CCDS34 LKSRVATFCKGAELKSICCIIHPESLCAQKLKMDHVMDVVVKSVNWICSRGLNHSEFTTL
640 650 660 670 680 690
>>CCDS5571.1 GTF2IRD1 gene_id:9569|Hs108|chr7 (959 aa)
initn: 1017 init1: 355 opt: 624 Z-score: 572.5 bits: 117.4 E(32554): 1.4e-25
Smith-Waterman score: 1318; 33.0% identity (59.2% similar) in 928 aa overlap (22-910:30-864)
10 20 30 40 50
pF1KB9 MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYET
..: :.:::.:::. :.: .:::::.::..
CCDS55 MALLGKRCDVPTNGCGPDRWNSAFTRKDEIITSLVSALDSMCSALSKLNAEVACVAVHDE
10 20 30 40 50 60
60 70 80 90 100
pF1KB9 DVFVVGTERGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQAN-------RMSVD
..::::::.:: :.:.::..:.::...: : : .. :.. ... : :..
CCDS55 SAFVVGTEKGRMFLNARKELQSDFLRFCRGPPWKDPEAEHPKKVQRGEGGGRSLPRSSLE
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB9 -AVEIETLRKTVEDYFCFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPEN
. .. ::: ::. : :..:::...:::.:::..::. . ..:::::::.::..: .
CCDS55 HGSDVYLLRKMVEEVFDVLYSEALGRASVVPLPYERLLREPGLLAVQGLPEGLAFRRPAE
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB9 YDLATLKWILENKAGISFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEP
:: .: :::.. : : .::: :: ::: :. . : : : .
CCDS55 YDPKALMAILEHSHRIRFKLKRP-LED----GGR----DSKALVELNGVSLIP-----KG
190 200 210 220
230 240 250 260 270 280
pF1KB9 TEDSGISLEMAAVTVKEESEDPDYYQYNIQGSHHSSEGNEGTEMEVPAE-DSTQHVPSET
..: : :. : : .. : . .. . .:. . . :. : : .::.
CCDS55 SRDCG--LHGQAPKVPPQDLPPTATSSSMASFLYSTALPNHAIRELKQEAPSCPLAPSDL
230 240 250 260 270 280
290 300 310 320 330
pF1KB9 SED---PEVEVTIEDDDYSPPSKRPKANELPQPPVPEPANAGKR---KVREFNFEKWNAR
. . :: ..: .: . ...: . : :. . ..:.:: .. . . :::.:
CCDS55 GLSRPMPEPKATGAQDFSDCCGQKPTG---PGGPLIQNVHASKRILFSIVHDKSEKWDAF
290 300 310 320 330 340
340 350 360 370 380 390
pF1KB9 ITD------LRKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRP
: . ::. :. ::. .::.:. : .:: . : . . :.:. :::.::
CCDS55 IKETEDINTLRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIVGIPDKIPFKRP
350 360 370 380 390 400
400 410 420 430 440
pF1KB9 STYGIPRLERILLAKERIRFVIKKH--ELL---NSTREDLQLDKPASGVKEEWYARITK-
:::.:.:.::: .. :.:.::. : . :. .: .::: :. :....
CCDS55 CTYGVPKLKRILEERHSIHFIIKRMFDERIFTGNKFTKDTTKLEPASP-PEDTSAEVSRA
410 420 430 440 450 460
450 460 470 480 490
pF1KB9 -LRKMVDQLFCKK--FAEALG-STEAKAVPYQKFEAHPNDLYV--EGLPENIPFRSPSWY
. .. . : ..: : .: .. . .. .:.:: . .:. :
CCDS55 TVLDLAGNARSDKGSMSEDCGPGTSGELGGLRPIKIEPEDLDIIQVTVPDPSPTSEEMTD
470 480 490 500 510 520
500 510 520 530 540 550
pF1KB9 GIPRLEKIIQVGNRIKFVIKRPELLT-HSTTEVTQPRTNTPVKEDWNVRITKLRKQVEEI
..: . : . :.:: .. .: ..:. . ::... . : :::::: .
CCDS55 SMPGHLPSEDSGYGM-------EMLTDKGLSEDARPE-ERPVEDSHGDVIRPLRKQVELL
530 540 550 560 570
560 570 580 590 600 610
pF1KB9 FNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNK
:: ..:.:.:..: ::::: : .:: :.: :::::: .: :. ::: .:..:...::.
CCDS55 FNTRYAKAIGISEPVKVPYSKFLMHPEELFVVGLPEGISLRRPNCFGIAKLRKILEASNS
580 590 600 610 620 630
620 630 640 650 660 670
pF1KB9 IKFVVKKPELVISYLP-PGMASKINTKALQ-SPKRPRSPGSNSKVPEIEVTVEGPNNNNP
:.::.:.:::. . : : :. ....: :: : : :: ....:
CCDS55 IQFVIKRPELLTEGVKEPIMDSQGTASSLGFSP--PALP------PE-------RDSGDP
640 650 660 670
680 690 700 710 720 730
pF1KB9 QTSAVRTPTQTNGSNVPFKPRGREFSFEAWNAKI---TDLKQKVENLFNEKCGEALGLKQ
.. .: .: . ...: ..: . :...:..:::.: :::::.:
CCDS55 LVDE------------SLKRQGFQENYDARLSRIDIANTLREQVQDLFNKKYGEALGIKY
680 690 700 710 720
740 750 760 770 780 790
pF1KB9 AVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFET
:.::. ..: : . .:::: :.:::.: ::: ::.:: :::: . .: :.
CCDS55 PVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIKFTVTRP--FQG
730 740 750 760 770 780
800 810 820 830 840 850
pF1KB9 AIKESTSSKSPPRKINSSPNVNTTASGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVN
: :. :. .:: .::. ::. :::::.
CCDS55 LI---------PK-----PD-------------------EDDANRLG--EKV-ILREQVK
790 800
860 870 880 890 900 910
pF1KB9 DLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSA
.::..:.:::.:.. :: :::. : .: : : :.: . :. :. .: ...::
CCDS55 ELFNEKYGEALGLNRPVLVPYKLIRDSPDAVEVTGLPDDIPFRNPNTYDIHRLEKILKAR
810 820 830 840 850 860
920 930 940 950 960 970
pF1KB9 EFIKFTVIRPFPGLVINNQLVDQSESEGPVIQESAEPSQLEVPATEEIKETDGSSQIKQE
CCDS55 EHVRMVIINQLQPFAEICNDAKVPAKDSSIPKRKRKRVSEGNSVSSSSSSSSSSSSNPDS
870 880 890 900 910 920
>>CCDS64682.1 GTF2IRD2 gene_id:84163|Hs108|chr7 (108 aa)
initn: 451 init1: 451 opt: 451 Z-score: 429.1 bits: 87.7 E(32554): 1.4e-17
Smith-Waterman score: 451; 88.8% identity (96.2% similar) in 80 aa overlap (1-80:1-80)
10 20 30 40 50 60
pF1KB9 MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE
:::::.::::::.: :::.:::::::.:::::::::::::::::::::::::::::::::
CCDS64 MAQVAVSTLPVEEESSSETRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF
:: ::::.: ::::::.:::
CCDS64 RGCAFVNARTDFQKDFAKYCRCFNFILCIPNLKRIAGKTSTVFSSKLS
70 80 90 100
>>CCDS47613.1 GTF2IRD1 gene_id:9569|Hs108|chr7 (944 aa)
initn: 1286 init1: 355 opt: 355 Z-score: 326.7 bits: 71.8 E(32554): 7.1e-12
Smith-Waterman score: 1290; 32.6% identity (58.3% similar) in 926 aa overlap (22-910:30-849)
10 20 30 40 50
pF1KB9 MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYET
..: :.:::.:::. :.: .:::::.::..
CCDS47 MALLGKRCDVPTNGCGPDRWNSAFTRKDEIITSLVSALDSMCSALSKLNAEVACVAVHDE
10 20 30 40 50 60
60 70 80 90 100
pF1KB9 DVFVVGTERGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQAN-------RMSVD
..::::::.:: :.:.::..:.::...: : : .. :.. ... : :..
CCDS47 SAFVVGTEKGRMFLNARKELQSDFLRFCRGPPWKDPEAEHPKKVQRGEGGGRSLPRSSLE
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB9 -AVEIETLRKTVEDYFCFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPEN
. .. ::: ::. : :..:::...:::.:::..::. . ..:::::::.::..: .
CCDS47 HGSDVYLLRKMVEEVFDVLYSEALGRASVVPLPYERLLREPGLLAVQGLPEGLAFRRPAE
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB9 YDLATLKWILENKAGISFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEP
:: .: :::.. : : .::: :: ::: :. . : : : .
CCDS47 YDPKALMAILEHSHRIRFKLKRP-LED----GGR----DSKALVELNGVSLIP-----KG
190 200 210 220
230 240 250 260 270 280
pF1KB9 TEDSGISLEMAAVTVKEESEDPDYYQYNIQGSHHSSEGNEGTEMEVPAE-DSTQHVPSET
..: : :. : : .. : . .. . .:. . . :. : : .::.
CCDS47 SRDCG--LHGQAPKVPPQDLPPTATSSSMASFLYSTALPNHAIRELKQEAPSCPLAPSDL
230 240 250 260 270 280
290 300 310 320 330
pF1KB9 SED---PEVEVTIEDDDYSPPSKRPKANELPQPPVPEPANAGKR---KVREFNFEKWNAR
. . :: ..: .: . ...: . : :. . ..:.:: .. . . :::.:
CCDS47 GLSRPMPEPKATGAQDFSDCCGQKPTG---PGGPLIQNVHASKRILFSIVHDKSEKWDAF
290 300 310 320 330 340
340 350 360 370 380 390
pF1KB9 ITD------LRKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRP
: . ::. :. ::. .::.:. : .:: . : . . :.:. :::.::
CCDS47 IKETEDINTLRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIVGIPDKIPFKRP
350 360 370 380 390 400
400 410 420 430 440
pF1KB9 STYGIPRLERILLAKERIRFVIKKH--ELL---NSTREDLQLDKPASGVKEEWYARITK-
:::.:.:.::: .. :.:.::. : . :. .: .::: :. :....
CCDS47 CTYGVPKLKRILEERHSIHFIIKRMFDERIFTGNKFTKDTTKLEPASP-PEDTSAEVSRA
410 420 430 440 450 460
450 460 470 480 490
pF1KB9 -LRKMVDQLFCKK--FAEALG-STEAKAVPYQKFEAHPNDLYV--EGLPENIPFRSPSWY
. .. . : ..: : .: .. . .. .:.:: . .:. :
CCDS47 TVLDLAGNARSDKGSMSEDCGPGTSGELGGLRPIKIEPEDLDIIQVTVPDPSPTSEEMTD
470 480 490 500 510 520
500 510 520 530 540 550
pF1KB9 GIPRLEKIIQVGNRIKFVIKRPELLT-HSTTEVTQPRTNTPVKEDWNVRITKLRKQVEEI
..: . : . :.:: .. .: ..:. . ::... . : :::::: .
CCDS47 SMPGHLPSEDSGYGM-------EMLTDKGLSEDARPE-ERPVEDSHGDVIRPLRKQVELL
530 540 550 560 570
560 570 580 590 600 610
pF1KB9 FNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNK
:: ..:.:.:..: ::::: : .:: :.: :::::: .: :. ::: .:..:...::.
CCDS47 FNTRYAKAIGISEPVKVPYSKFLMHPEELFVVGLPEGISLRRPNCFGIAKLRKILEASNS
580 590 600 610 620 630
620 630 640 650 660 670
pF1KB9 IKFVVKKPELVISYLPPGMASKINTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNNPQT
:.::.:.::: : :. : ..: .: .: : .. ..
CCDS47 IQFVIKRPEL----LTEGVKEPI----MDSQER------DSGDPLVDESL----------
640 650 660
680 690 700 710 720 730
pF1KB9 SAVRTPTQTNGSNVPFKPRGREFSFEAWNAKI---TDLKQKVENLFNEKCGEALGLKQAV
: .: . ...: ..: . :...:..:::.: :::::.: :
CCDS47 ----------------KRQGFQENYDARLSRIDIANTLREQVQDLFNKKYGEALGIKYPV
670 680 690 700 710
740 750 760 770 780 790
pF1KB9 KVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAI
.::. ..: : . .:::: :.:::.: ::: ::.:: :::: . .: :. :
CCDS47 QVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIKFTVTRP--FQGLI
720 730 740 750 760 770
800 810 820 830 840 850
pF1KB9 KESTSSKSPPRKINSSPNVNTTASGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDL
:. :. .:: .::. ::. :::::..:
CCDS47 ---------PK-----PD-------------------EDDANRLG--EKV-ILREQVKEL
780 790
860 870 880 890 900 910
pF1KB9 FSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEF
:..:.:::.:.. :: :::. : .: : : :.: . :. :. .: ...::
CCDS47 FNEKYGEALGLNRPVLVPYKLIRDSPDAVEVTGLPDDIPFRNPNTYDIHRLEKILKAREH
800 810 820 830 840 850
920 930 940 950 960 970
pF1KB9 IKFTVIRPFPGLVINNQLVDQSESEGPVIQESAEPSQLEVPATEEIKETDGSSQIKQEPD
CCDS47 VRMVIINQLQPFAEICNDAKVPAKDSSIPKRKRKRVSEGNSVSSSSSSSSSSSSNPDSVA
860 870 880 890 900 910
978 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 22:58:47 2016 done: Thu Nov 3 22:58:48 2016
Total Scan time: 4.850 Total Display time: 0.330
Function used was FASTA [36.3.4 Apr, 2011]