Result of FASTA (omim) for
pF1KB9140
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9140, 376 aa
1>>>pF1KB9140 376 - 376 aa - 376 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.7194+/-0.000337; mu= 10.2348+/- 0.021
mean_var=115.3219+/-23.078, 0's: 0 Z-trim(117.6): 30 B-trim: 183 in 1/51
Lambda= 0.119431
statistics sampled from 29664 (29694) to 29664 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.719), E-opt: 0.2 (0.348), width: 16
Scan time: 8.560
The best scores are: opt bits E(85289)
NP_001284683 (OMIM: 616836) G patch domain-contain ( 376) 2567 453.1 4.7e-127
XP_011507996 (OMIM: 616836) PREDICTED: G patch dom ( 398) 2500 441.6 1.5e-123
XP_016857082 (OMIM: 616836) PREDICTED: G patch dom ( 418) 2499 441.5 1.7e-123
XP_011507995 (OMIM: 616836) PREDICTED: G patch dom ( 479) 2499 441.5 1.9e-123
XP_016857081 (OMIM: 616836) PREDICTED: G patch dom ( 491) 2499 441.5 2e-123
XP_011507992 (OMIM: 616836) PREDICTED: G patch dom ( 514) 2499 441.5 2e-123
NP_060510 (OMIM: 616836) G patch domain-containing ( 528) 2499 441.5 2.1e-123
XP_011507991 (OMIM: 616836) PREDICTED: G patch dom ( 551) 2499 441.5 2.2e-123
XP_011507993 (OMIM: 616836) PREDICTED: G patch dom ( 490) 1886 335.9 1.2e-91
>>NP_001284683 (OMIM: 616836) G patch domain-containing (376 aa)
initn: 2567 init1: 2567 opt: 2567 Z-score: 2402.0 bits: 453.1 E(85289): 4.7e-127
Smith-Waterman score: 2567; 100.0% identity (100.0% similar) in 376 aa overlap (1-376:1-376)
10 20 30 40 50 60
pF1KB9 MFGAAGRQPIGAPAAGNSWHFSRTMEELVHDLVSALEESSEQARGGFAETGDHSRSISCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MFGAAGRQPIGAPAAGNSWHFSRTMEELVHDLVSALEESSEQARGGFAETGDHSRSISCP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LKRQARKRRGRKRRSYNVHHPWETGHCLSEGSDSSLEEPSKDYRENHNNNKKDHSDSDDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKRQARKRRGRKRRSYNVHHPWETGHCLSEGSDSSLEEPSKDYRENHNNNKKDHSDSDDQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 MLVAKRRPSSNLNNNVRGKRPLWHESDFAVDNVGNRTLRRRRKVKRMAVDLPQDISNKRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLVAKRRPSSNLNNNVRGKRPLWHESDFAVDNVGNRTLRRRRKVKRMAVDLPQDISNKRT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 MTQPPEGCRDQDMDSDRAYQYQEFTKNKVKKRKLKIIRQGPKIQDEGVVLESEETNQTNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTQPPEGCRDQDMDSDRAYQYQEFTKNKVKKRKLKIIRQGPKIQDEGVVLESEETNQTNK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 DKMECEEQKVSDELMSESDSSSLSSTDAGLFTNDEGRQGDDEQSDWFYEKESGGACGITG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DKMECEEQKVSDELMSESDSSSLSSTDAGLFTNDEGRQGDDEQSDWFYEKESGGACGITG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 VVPWWEKEDPTELDKNVPDPVFESILTGSFPLMSHPSRRGFQARLSRLHGMSSKNIKKSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVPWWEKEDPTELDKNVPDPVFESILTGSFPLMSHPSRRGFQARLSRLHGMSSKNIKKSG
310 320 330 340 350 360
370
pF1KB9 GTPTSMATNWTSEIPL
::::::::::::::::
NP_001 GTPTSMATNWTSEIPL
370
>>XP_011507996 (OMIM: 616836) PREDICTED: G patch domain- (398 aa)
initn: 2499 init1: 2499 opt: 2500 Z-score: 2339.2 bits: 441.6 E(85289): 1.5e-123
Smith-Waterman score: 2500; 97.9% identity (99.2% similar) in 376 aa overlap (1-376:1-375)
10 20 30 40 50 60
pF1KB9 MFGAAGRQPIGAPAAGNSWHFSRTMEELVHDLVSALEESSEQARGGFAETGDHSRSISCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MFGAAGRQPIGAPAAGNSWHFSRTMEELVHDLVSALEESSEQARGGFAETGDHSRSISCP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LKRQARKRRGRKRRSYNVHHPWETGHCLSEGSDSSLEEPSKDYRENHNNNKKDHSDSDDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LKRQARKRRGRKRRSYNVHHPWETGHCLSEGSDSSLEEPSKDYRENHNNNKKDHSDSDDQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 MLVAKRRPSSNLNNNVRGKRPLWHESDFAVDNVGNRTLRRRRKVKRMAVDLPQDISNKRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MLVAKRRPSSNLNNNVRGKRPLWHESDFAVDNVGNRTLRRRRKVKRMAVDLPQDISNKRT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 MTQPPEGCRDQDMDSDRAYQYQEFTKNKVKKRKLKIIRQGPKIQDEGVVLESEETNQTNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MTQPPEGCRDQDMDSDRAYQYQEFTKNKVKKRKLKIIRQGPKIQDEGVVLESEETNQTNK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 DKMECEEQKVSDELMSESDSSSLSSTDAGLFTNDEGRQGDDEQSDWFYEKESGGACGITG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DKMECEEQKVSDELMSESDSSSLSSTDAGLFTNDEGRQGDDEQSDWFYEKESGGACGITG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 VVPWWEKEDPTELDKNVPDPVFESILTGSFPLMSHPSRRGFQARLSRLHGMSSKNIKKSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VVPWWEKEDPTELDKNVPDPVFESILTGSFPLMSHPSRRGFQARLSRLHGMSSKNIKKSG
310 320 330 340 350 360
370
pF1KB9 GTPTSMATNWTSEIPL
::::::. . .:.. :
XP_011 GTPTSMGLS-SSQFDLTIPWLVLLTTCAWSHGQHRKTIT
370 380 390
>>XP_016857082 (OMIM: 616836) PREDICTED: G patch domain- (418 aa)
initn: 2499 init1: 2499 opt: 2499 Z-score: 2338.0 bits: 441.5 E(85289): 1.7e-123
Smith-Waterman score: 2499; 100.0% identity (100.0% similar) in 366 aa overlap (1-366:1-366)
10 20 30 40 50 60
pF1KB9 MFGAAGRQPIGAPAAGNSWHFSRTMEELVHDLVSALEESSEQARGGFAETGDHSRSISCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MFGAAGRQPIGAPAAGNSWHFSRTMEELVHDLVSALEESSEQARGGFAETGDHSRSISCP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LKRQARKRRGRKRRSYNVHHPWETGHCLSEGSDSSLEEPSKDYRENHNNNKKDHSDSDDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKRQARKRRGRKRRSYNVHHPWETGHCLSEGSDSSLEEPSKDYRENHNNNKKDHSDSDDQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 MLVAKRRPSSNLNNNVRGKRPLWHESDFAVDNVGNRTLRRRRKVKRMAVDLPQDISNKRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLVAKRRPSSNLNNNVRGKRPLWHESDFAVDNVGNRTLRRRRKVKRMAVDLPQDISNKRT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 MTQPPEGCRDQDMDSDRAYQYQEFTKNKVKKRKLKIIRQGPKIQDEGVVLESEETNQTNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTQPPEGCRDQDMDSDRAYQYQEFTKNKVKKRKLKIIRQGPKIQDEGVVLESEETNQTNK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 DKMECEEQKVSDELMSESDSSSLSSTDAGLFTNDEGRQGDDEQSDWFYEKESGGACGITG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DKMECEEQKVSDELMSESDSSSLSSTDAGLFTNDEGRQGDDEQSDWFYEKESGGACGITG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 VVPWWEKEDPTELDKNVPDPVFESILTGSFPLMSHPSRRGFQARLSRLHGMSSKNIKKSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VVPWWEKEDPTELDKNVPDPVFESILTGSFPLMSHPSRRGFQARLSRLHGMSSKNIKKSG
310 320 330 340 350 360
370
pF1KB9 GTPTSMATNWTSEIPL
::::::
XP_016 GTPTSMVPIPGPVGNKRMVHFSPDSHHHDHWFSPGARTEHDQVTNKGIVSSFGLSPAI
370 380 390 400 410
>>XP_011507995 (OMIM: 616836) PREDICTED: G patch domain- (479 aa)
initn: 2499 init1: 2499 opt: 2499 Z-score: 2337.2 bits: 441.5 E(85289): 1.9e-123
Smith-Waterman score: 2499; 100.0% identity (100.0% similar) in 366 aa overlap (1-366:1-366)
10 20 30 40 50 60
pF1KB9 MFGAAGRQPIGAPAAGNSWHFSRTMEELVHDLVSALEESSEQARGGFAETGDHSRSISCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MFGAAGRQPIGAPAAGNSWHFSRTMEELVHDLVSALEESSEQARGGFAETGDHSRSISCP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LKRQARKRRGRKRRSYNVHHPWETGHCLSEGSDSSLEEPSKDYRENHNNNKKDHSDSDDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LKRQARKRRGRKRRSYNVHHPWETGHCLSEGSDSSLEEPSKDYRENHNNNKKDHSDSDDQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 MLVAKRRPSSNLNNNVRGKRPLWHESDFAVDNVGNRTLRRRRKVKRMAVDLPQDISNKRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MLVAKRRPSSNLNNNVRGKRPLWHESDFAVDNVGNRTLRRRRKVKRMAVDLPQDISNKRT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 MTQPPEGCRDQDMDSDRAYQYQEFTKNKVKKRKLKIIRQGPKIQDEGVVLESEETNQTNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MTQPPEGCRDQDMDSDRAYQYQEFTKNKVKKRKLKIIRQGPKIQDEGVVLESEETNQTNK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 DKMECEEQKVSDELMSESDSSSLSSTDAGLFTNDEGRQGDDEQSDWFYEKESGGACGITG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DKMECEEQKVSDELMSESDSSSLSSTDAGLFTNDEGRQGDDEQSDWFYEKESGGACGITG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 VVPWWEKEDPTELDKNVPDPVFESILTGSFPLMSHPSRRGFQARLSRLHGMSSKNIKKSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VVPWWEKEDPTELDKNVPDPVFESILTGSFPLMSHPSRRGFQARLSRLHGMSSKNIKKSG
310 320 330 340 350 360
370
pF1KB9 GTPTSMATNWTSEIPL
::::::
XP_011 GTPTSMVPIPGPVGNKRMVHFSPDSHHHDHWFSPGARTEHDQHQLLRDNRAERGHKKNCS
370 380 390 400 410 420
>>XP_016857081 (OMIM: 616836) PREDICTED: G patch domain- (491 aa)
initn: 2499 init1: 2499 opt: 2499 Z-score: 2337.0 bits: 441.5 E(85289): 2e-123
Smith-Waterman score: 2499; 100.0% identity (100.0% similar) in 366 aa overlap (1-366:1-366)
10 20 30 40 50 60
pF1KB9 MFGAAGRQPIGAPAAGNSWHFSRTMEELVHDLVSALEESSEQARGGFAETGDHSRSISCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MFGAAGRQPIGAPAAGNSWHFSRTMEELVHDLVSALEESSEQARGGFAETGDHSRSISCP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LKRQARKRRGRKRRSYNVHHPWETGHCLSEGSDSSLEEPSKDYRENHNNNKKDHSDSDDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKRQARKRRGRKRRSYNVHHPWETGHCLSEGSDSSLEEPSKDYRENHNNNKKDHSDSDDQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 MLVAKRRPSSNLNNNVRGKRPLWHESDFAVDNVGNRTLRRRRKVKRMAVDLPQDISNKRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLVAKRRPSSNLNNNVRGKRPLWHESDFAVDNVGNRTLRRRRKVKRMAVDLPQDISNKRT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 MTQPPEGCRDQDMDSDRAYQYQEFTKNKVKKRKLKIIRQGPKIQDEGVVLESEETNQTNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTQPPEGCRDQDMDSDRAYQYQEFTKNKVKKRKLKIIRQGPKIQDEGVVLESEETNQTNK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 DKMECEEQKVSDELMSESDSSSLSSTDAGLFTNDEGRQGDDEQSDWFYEKESGGACGITG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DKMECEEQKVSDELMSESDSSSLSSTDAGLFTNDEGRQGDDEQSDWFYEKESGGACGITG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 VVPWWEKEDPTELDKNVPDPVFESILTGSFPLMSHPSRRGFQARLSRLHGMSSKNIKKSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VVPWWEKEDPTELDKNVPDPVFESILTGSFPLMSHPSRRGFQARLSRLHGMSSKNIKKSG
310 320 330 340 350 360
370
pF1KB9 GTPTSMATNWTSEIPL
::::::
XP_016 GTPTSMVPIPGPVGNKRMVHFSPDSHHHEQTSMHLGSLCTGDIKRRRKAAPLPGPTTAGF
370 380 390 400 410 420
>>XP_011507992 (OMIM: 616836) PREDICTED: G patch domain- (514 aa)
initn: 2499 init1: 2499 opt: 2499 Z-score: 2336.7 bits: 441.5 E(85289): 2e-123
Smith-Waterman score: 2499; 100.0% identity (100.0% similar) in 366 aa overlap (1-366:1-366)
10 20 30 40 50 60
pF1KB9 MFGAAGRQPIGAPAAGNSWHFSRTMEELVHDLVSALEESSEQARGGFAETGDHSRSISCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MFGAAGRQPIGAPAAGNSWHFSRTMEELVHDLVSALEESSEQARGGFAETGDHSRSISCP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LKRQARKRRGRKRRSYNVHHPWETGHCLSEGSDSSLEEPSKDYRENHNNNKKDHSDSDDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LKRQARKRRGRKRRSYNVHHPWETGHCLSEGSDSSLEEPSKDYRENHNNNKKDHSDSDDQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 MLVAKRRPSSNLNNNVRGKRPLWHESDFAVDNVGNRTLRRRRKVKRMAVDLPQDISNKRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MLVAKRRPSSNLNNNVRGKRPLWHESDFAVDNVGNRTLRRRRKVKRMAVDLPQDISNKRT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 MTQPPEGCRDQDMDSDRAYQYQEFTKNKVKKRKLKIIRQGPKIQDEGVVLESEETNQTNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MTQPPEGCRDQDMDSDRAYQYQEFTKNKVKKRKLKIIRQGPKIQDEGVVLESEETNQTNK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 DKMECEEQKVSDELMSESDSSSLSSTDAGLFTNDEGRQGDDEQSDWFYEKESGGACGITG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DKMECEEQKVSDELMSESDSSSLSSTDAGLFTNDEGRQGDDEQSDWFYEKESGGACGITG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 VVPWWEKEDPTELDKNVPDPVFESILTGSFPLMSHPSRRGFQARLSRLHGMSSKNIKKSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VVPWWEKEDPTELDKNVPDPVFESILTGSFPLMSHPSRRGFQARLSRLHGMSSKNIKKSG
310 320 330 340 350 360
370
pF1KB9 GTPTSMATNWTSEIPL
::::::
XP_011 GTPTSMVPIPGPVGNKRMVHFSPDSHHHEQTSMHLGSLCTGDIKRRRKAAPLPGPTTAGT
370 380 390 400 410 420
>>NP_060510 (OMIM: 616836) G patch domain-containing pro (528 aa)
initn: 2499 init1: 2499 opt: 2499 Z-score: 2336.5 bits: 441.5 E(85289): 2.1e-123
Smith-Waterman score: 2499; 100.0% identity (100.0% similar) in 366 aa overlap (1-366:1-366)
10 20 30 40 50 60
pF1KB9 MFGAAGRQPIGAPAAGNSWHFSRTMEELVHDLVSALEESSEQARGGFAETGDHSRSISCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MFGAAGRQPIGAPAAGNSWHFSRTMEELVHDLVSALEESSEQARGGFAETGDHSRSISCP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LKRQARKRRGRKRRSYNVHHPWETGHCLSEGSDSSLEEPSKDYRENHNNNKKDHSDSDDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 LKRQARKRRGRKRRSYNVHHPWETGHCLSEGSDSSLEEPSKDYRENHNNNKKDHSDSDDQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 MLVAKRRPSSNLNNNVRGKRPLWHESDFAVDNVGNRTLRRRRKVKRMAVDLPQDISNKRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MLVAKRRPSSNLNNNVRGKRPLWHESDFAVDNVGNRTLRRRRKVKRMAVDLPQDISNKRT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 MTQPPEGCRDQDMDSDRAYQYQEFTKNKVKKRKLKIIRQGPKIQDEGVVLESEETNQTNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MTQPPEGCRDQDMDSDRAYQYQEFTKNKVKKRKLKIIRQGPKIQDEGVVLESEETNQTNK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 DKMECEEQKVSDELMSESDSSSLSSTDAGLFTNDEGRQGDDEQSDWFYEKESGGACGITG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 DKMECEEQKVSDELMSESDSSSLSSTDAGLFTNDEGRQGDDEQSDWFYEKESGGACGITG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 VVPWWEKEDPTELDKNVPDPVFESILTGSFPLMSHPSRRGFQARLSRLHGMSSKNIKKSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 VVPWWEKEDPTELDKNVPDPVFESILTGSFPLMSHPSRRGFQARLSRLHGMSSKNIKKSG
310 320 330 340 350 360
370
pF1KB9 GTPTSMATNWTSEIPL
::::::
NP_060 GTPTSMVPIPGPVGNKRMVHFSPDSHHHDHWFSPGARTEHDQHQLLRDNRAERGHKKNCS
370 380 390 400 410 420
>>XP_011507991 (OMIM: 616836) PREDICTED: G patch domain- (551 aa)
initn: 2499 init1: 2499 opt: 2499 Z-score: 2336.3 bits: 441.5 E(85289): 2.2e-123
Smith-Waterman score: 2499; 100.0% identity (100.0% similar) in 366 aa overlap (1-366:1-366)
10 20 30 40 50 60
pF1KB9 MFGAAGRQPIGAPAAGNSWHFSRTMEELVHDLVSALEESSEQARGGFAETGDHSRSISCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MFGAAGRQPIGAPAAGNSWHFSRTMEELVHDLVSALEESSEQARGGFAETGDHSRSISCP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LKRQARKRRGRKRRSYNVHHPWETGHCLSEGSDSSLEEPSKDYRENHNNNKKDHSDSDDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LKRQARKRRGRKRRSYNVHHPWETGHCLSEGSDSSLEEPSKDYRENHNNNKKDHSDSDDQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 MLVAKRRPSSNLNNNVRGKRPLWHESDFAVDNVGNRTLRRRRKVKRMAVDLPQDISNKRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MLVAKRRPSSNLNNNVRGKRPLWHESDFAVDNVGNRTLRRRRKVKRMAVDLPQDISNKRT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 MTQPPEGCRDQDMDSDRAYQYQEFTKNKVKKRKLKIIRQGPKIQDEGVVLESEETNQTNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MTQPPEGCRDQDMDSDRAYQYQEFTKNKVKKRKLKIIRQGPKIQDEGVVLESEETNQTNK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 DKMECEEQKVSDELMSESDSSSLSSTDAGLFTNDEGRQGDDEQSDWFYEKESGGACGITG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DKMECEEQKVSDELMSESDSSSLSSTDAGLFTNDEGRQGDDEQSDWFYEKESGGACGITG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 VVPWWEKEDPTELDKNVPDPVFESILTGSFPLMSHPSRRGFQARLSRLHGMSSKNIKKSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VVPWWEKEDPTELDKNVPDPVFESILTGSFPLMSHPSRRGFQARLSRLHGMSSKNIKKSG
310 320 330 340 350 360
370
pF1KB9 GTPTSMATNWTSEIPL
::::::
XP_011 GTPTSMVPIPGPVGNKRMVHFSPDSHHHDHWFSPGARTEHDQHQLLRDNRAERGHKKNCS
370 380 390 400 410 420
>>XP_011507993 (OMIM: 616836) PREDICTED: G patch domain- (490 aa)
initn: 1886 init1: 1886 opt: 1886 Z-score: 1766.2 bits: 335.9 E(85289): 1.2e-91
Smith-Waterman score: 1921; 83.3% identity (83.3% similar) in 366 aa overlap (1-366:1-305)
10 20 30 40 50 60
pF1KB9 MFGAAGRQPIGAPAAGNSWHFSRTMEELVHDLVSALEESSEQARGGFAETGDHSRSISCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MFGAAGRQPIGAPAAGNSWHFSRTMEELVHDLVSALEESSEQARGGFAETGDHSRSISCP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LKRQARKRRGRKRRSYNVHHPWETGHCLSEGSDSSLEEPSKDYRENHNNNKKDHSDSDDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LKRQARKRRGRKRRSYNVHHPWETGHCLSEGSDSSLEEPSKDYRENHNNNKKDHSDSDDQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 MLVAKRRPSSNLNNNVRGKRPLWHESDFAVDNVGNRTLRRRRKVKRMAVDLPQDISNKRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MLVAKRRPSSNLNNNVRGKRPLWHESDFAVDNVGNRTLRRRRKVKRMAVDLPQDISNKRT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 MTQPPEGCRDQDMDSDRAYQYQEFTKNKVKKRKLKIIRQGPKIQDEGVVLESEETNQTNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MTQPPEGCRDQDMDSDRAYQYQEFTKNKVKKRKLKIIRQGPKIQDEGVVLESEETNQTNK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 DKMECEEQKVSDELMSESDSSSLSSTDAGLFTNDEGRQGDDEQSDWFYEKESGGACGITG
:::::::::::::::::::::::::::::::::::::::
XP_011 DKMECEEQKVSDELMSESDSSSLSSTDAGLFTNDEGRQG---------------------
250 260 270
310 320 330 340 350 360
pF1KB9 VVPWWEKEDPTELDKNVPDPVFESILTGSFPLMSHPSRRGFQARLSRLHGMSSKNIKKSG
::::::::::::::::::::
XP_011 ----------------------------------------FQARLSRLHGMSSKNIKKSG
280 290
370
pF1KB9 GTPTSMATNWTSEIPL
::::::
XP_011 GTPTSMVPIPGPVGNKRMVHFSPDSHHHDHWFSPGARTEHDQHQLLRDNRAERGHKKNCS
300 310 320 330 340 350
376 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 13:14:22 2016 done: Sat Nov 5 13:14:23 2016
Total Scan time: 8.560 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]