FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB9273, 376 aa 1>>>pF1KB9273 376 - 376 aa - 376 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3998+/-0.000823; mu= 15.5856+/- 0.049 mean_var=60.5803+/-12.184, 0's: 0 Z-trim(106.4): 10 B-trim: 458 in 1/51 Lambda= 0.164782 statistics sampled from 8954 (8958) to 8954 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.667), E-opt: 0.2 (0.275), width: 16 Scan time: 2.690 The best scores are: opt bits E(32554) CCDS63510.1 TRMU gene_id:55687|Hs108|chr22 ( 376) 2619 631.1 4.8e-181 CCDS14075.1 TRMU gene_id:55687|Hs108|chr22 ( 421) 2360 569.5 1.8e-162 >>CCDS63510.1 TRMU gene_id:55687|Hs108|chr22 (376 aa) initn: 2619 init1: 2619 opt: 2619 Z-score: 3363.8 bits: 631.1 E(32554): 4.8e-181 Smith-Waterman score: 2619; 100.0% identity (100.0% similar) in 376 aa overlap (1-376:1-376) 10 20 30 40 50 60 pF1KB9 MQALRHVVCALSGGVDSAVAALLLRRRGYQVTGVFMKNWDSLDEHGVCTADKDCEDAYRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS63 MQALRHVVCALSGGVDSAVAALLLRRRGYQVTGVFMKNWDSLDEHGVCTADKDCEDAYRV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB9 CQILDIPFHQVSYVKEYWNDVFSDFLNEYEKGRTPNPDIVCNKHIKFSCFFHYAVDNLGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS63 CQILDIPFHQVSYVKEYWNDVFSDFLNEYEKGRTPNPDIVCNKHIKFSCFFHYAVDNLGA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB9 DAIATGHYARTSLEDEEVFEQKHVKKPEGLFRNRFEVRNAVKLLQAADSFKDQTFFLSQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS63 DAIATGHYARTSLEDEEVFEQKHVKKPEGLFRNRFEVRNAVKLLQAADSFKDQTFFLSQV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB9 SQDALRRTIFPLGGLTKEFVKKIAAENRLHHVLQKKESMGMCFIGKRNFEHFLLQYLQPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS63 SQDALRRTIFPLGGLTKEFVKKIAAENRLHHVLQKKESMGMCFIGKRNFEHFLLQYLQPR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB9 PGHFISIEDNKVLGTHKGWFLYTLGQRANIGGLREPWYVVEKDSVKGDVFVAPRTDHPAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS63 PGHFISIEDNKVLGTHKGWFLYTLGQRANIGGLREPWYVVEKDSVKGDVFVAPRTDHPAL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB9 YRDLLRTSRVHWIAEEPPAALVRDKMMECHFRFRHQMALVCCVLQGGRVPGQREDPAAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS63 YRDLLRTSRVHWIAEEPPAALVRDKMMECHFRFRHQMALVCCVLQGGRVPGQREDPAAGA 310 320 330 340 350 360 370 pF1KB9 VCLHAPEGPAQSWDGH :::::::::::::::: CCDS63 VCLHAPEGPAQSWDGH 370 >>CCDS14075.1 TRMU gene_id:55687|Hs108|chr22 (421 aa) initn: 2358 init1: 2358 opt: 2360 Z-score: 3030.2 bits: 569.5 E(32554): 1.8e-162 Smith-Waterman score: 2360; 98.3% identity (98.3% similar) in 352 aa overlap (1-349:1-352) 10 20 30 40 50 60 pF1KB9 MQALRHVVCALSGGVDSAVAALLLRRRGYQVTGVFMKNWDSLDEHGVCTADKDCEDAYRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 MQALRHVVCALSGGVDSAVAALLLRRRGYQVTGVFMKNWDSLDEHGVCTADKDCEDAYRV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB9 CQILDIPFHQVSYVKEYWNDVFSDFLNEYEKGRTPNPDIVCNKHIKFSCFFHYAVDNLGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 CQILDIPFHQVSYVKEYWNDVFSDFLNEYEKGRTPNPDIVCNKHIKFSCFFHYAVDNLGA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB9 DAIATGHYARTSLEDEEVFEQKHVKKPEGLFRNRFEVRNAVKLLQAADSFKDQTFFLSQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 DAIATGHYARTSLEDEEVFEQKHVKKPEGLFRNRFEVRNAVKLLQAADSFKDQTFFLSQV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB9 SQDALRRTIFPLGGLTKEFVKKIAAENRLHHVLQKKESMGMCFIGKRNFEHFLLQYLQPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 SQDALRRTIFPLGGLTKEFVKKIAAENRLHHVLQKKESMGMCFIGKRNFEHFLLQYLQPR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB9 PGHFISIEDNKVLGTHKGWFLYTLGQRANIGGLREPWYVVEKDSVKGDVFVAPRTDHPAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 PGHFISIEDNKVLGTHKGWFLYTLGQRANIGGLREPWYVVEKDSVKGDVFVAPRTDHPAL 250 260 270 280 290 300 310 320 330 340 350 pF1KB9 YRDLLRTSRVHWIAEEPPAALVRDKMMECHFRFRHQMALVCCVL---QGGRVPGQREDPA :::::::::::::::::::::::::::::::::::::::: ::: : : : CCDS14 YRDLLRTSRVHWIAEEPPAALVRDKMMECHFRFRHQMALVPCVLTLNQDGTVWVTAVQAV 310 320 330 340 350 360 360 370 pF1KB9 AGAVCLHAPEGPAQSWDGH CCDS14 RALATGQFAVFYKGDECLGSGKILRLGPSAYTLQKGQRRAGMATESPSDSPEDGPGLSPL 370 380 390 400 410 420 376 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Fri Nov 4 17:01:14 2016 done: Fri Nov 4 17:01:14 2016 Total Scan time: 2.690 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]