Result of FASTA (omim) for
pF1KB9359
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9359, 292 aa
1>>>pF1KB9359 292 - 292 aa - 292 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6273+/-0.000309; mu= 14.8443+/- 0.019
mean_var=80.6706+/-16.084, 0's: 0 Z-trim(118.6): 49 B-trim: 797 in 2/55
Lambda= 0.142796
statistics sampled from 31609 (31660) to 31609 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.732), E-opt: 0.2 (0.371), width: 16
Scan time: 8.200
The best scores are: opt bits E(85289)
NP_001751 (OMIM: 123834) G1/S-specific cyclin-D3 i ( 292) 1949 410.5 1.9e-114
NP_001274356 (OMIM: 123834) G1/S-specific cyclin-D ( 242) 1481 314.1 1.7e-85
NP_001129489 (OMIM: 123834) G1/S-specific cyclin-D ( 211) 1373 291.8 7.8e-79
XP_011513273 (OMIM: 123834) PREDICTED: G1/S-specif ( 276) 1304 277.6 1.8e-74
NP_001750 (OMIM: 123833,615938) G1/S-specific cycl ( 289) 1173 250.7 2.5e-66
NP_001129597 (OMIM: 123834) G1/S-specific cyclin-D ( 220) 1004 215.8 6.2e-56
NP_444284 (OMIM: 168461,193300,254500) G1/S-specif ( 295) 992 213.4 4.3e-55
XP_011513274 (OMIM: 123834) PREDICTED: G1/S-specif ( 195) 728 158.9 7.3e-39
NP_001274363 (OMIM: 123834) G1/S-specific cyclin-D ( 96) 613 135.0 5.6e-32
NP_001129598 (OMIM: 123834) G1/S-specific cyclin-D ( 96) 613 135.0 5.6e-32
XP_011533596 (OMIM: 604036) PREDICTED: cyclin-A1 i ( 421) 349 81.0 4.3e-15
NP_001104517 (OMIM: 604036) cyclin-A1 isoform c [H ( 421) 349 81.0 4.3e-15
XP_011533598 (OMIM: 604036) PREDICTED: cyclin-A1 i ( 421) 349 81.0 4.3e-15
XP_011533597 (OMIM: 604036) PREDICTED: cyclin-A1 i ( 421) 349 81.0 4.3e-15
NP_001104516 (OMIM: 604036) cyclin-A1 isoform c [H ( 421) 349 81.0 4.3e-15
NP_001104515 (OMIM: 604036) cyclin-A1 isoform b [H ( 464) 349 81.0 4.7e-15
NP_003905 (OMIM: 604036) cyclin-A1 isoform a [Homo ( 465) 349 81.0 4.7e-15
NP_001228 (OMIM: 123835) cyclin-A2 [Homo sapiens] ( 432) 327 76.5 1e-13
XP_016869448 (OMIM: 603775) PREDICTED: G1/S-specif ( 404) 306 72.1 1.9e-12
XP_016869447 (OMIM: 603775) PREDICTED: G1/S-specif ( 404) 306 72.1 1.9e-12
NP_477097 (OMIM: 603775) G1/S-specific cyclin-E2 [ ( 404) 306 72.1 1.9e-12
XP_016869446 (OMIM: 603775) PREDICTED: G1/S-specif ( 404) 306 72.1 1.9e-12
XP_011515668 (OMIM: 603775) PREDICTED: G1/S-specif ( 288) 297 70.2 5.3e-12
NP_001309191 (OMIM: 123837) G1/S-specific cyclin-E ( 395) 285 67.8 3.8e-11
XP_011525742 (OMIM: 123837) PREDICTED: G1/S-specif ( 407) 285 67.8 3.9e-11
NP_001229 (OMIM: 123837) G1/S-specific cyclin-E1 i ( 410) 285 67.8 3.9e-11
NP_114172 (OMIM: 123836) G2/mitotic-specific cycli ( 433) 284 67.6 4.7e-11
NP_004692 (OMIM: 602755) G2/mitotic-specific cycli ( 398) 269 64.5 3.8e-10
NP_001309188 (OMIM: 123837) G1/S-specific cyclin-E ( 365) 236 57.7 3.9e-08
NP_066970 (OMIM: 607752,615872) cyclin-O [Homo sap ( 350) 211 52.5 1.3e-06
NP_954854 (OMIM: 601578) cyclin-G1 [Homo sapiens] ( 295) 181 46.3 8.5e-05
NP_004051 (OMIM: 601578) cyclin-G1 [Homo sapiens] ( 295) 181 46.3 8.5e-05
NP_149020 (OMIM: 300456) G2/mitotic-specific cycli (1395) 183 47.1 0.00022
XP_016885407 (OMIM: 300456) PREDICTED: G2/mitotic- (1395) 183 47.1 0.00022
XP_016885406 (OMIM: 300456) PREDICTED: G2/mitotic- (1396) 183 47.1 0.00022
XP_016885405 (OMIM: 300456) PREDICTED: G2/mitotic- (1403) 177 45.9 0.00053
XP_016885403 (OMIM: 300456) PREDICTED: G2/mitotic- (1404) 177 45.9 0.00053
XP_016885404 (OMIM: 300456) PREDICTED: G2/mitotic- (1404) 177 45.9 0.00053
XP_016885402 (OMIM: 300456) PREDICTED: G2/mitotic- (1404) 177 45.9 0.00053
NP_004345 (OMIM: 603203) cyclin-G2 [Homo sapiens] ( 344) 158 41.6 0.0026
XP_011530700 (OMIM: 603203) PREDICTED: cyclin-G2 i ( 344) 158 41.6 0.0026
XP_011530701 (OMIM: 603203) PREDICTED: cyclin-G2 i ( 344) 158 41.6 0.0026
>>NP_001751 (OMIM: 123834) G1/S-specific cyclin-D3 isofo (292 aa)
initn: 1949 init1: 1949 opt: 1949 Z-score: 2175.6 bits: 410.5 E(85289): 1.9e-114
Smith-Waterman score: 1949; 99.7% identity (100.0% similar) in 292 aa overlap (1-292:1-292)
10 20 30 40 50 60
pF1KB9 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKML
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 AYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 IEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 HAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCL
190 200 210 220 230 240
250 260 270 280 290
pF1KB9 RACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL
::::::::::::::::::.:::::::::::::::::::::::::::::::::
NP_001 RACQEQIEAALRESLREASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL
250 260 270 280 290
>>NP_001274356 (OMIM: 123834) G1/S-specific cyclin-D3 is (242 aa)
initn: 1481 init1: 1481 opt: 1481 Z-score: 1655.7 bits: 314.1 E(85289): 1.7e-85
Smith-Waterman score: 1481; 99.6% identity (100.0% similar) in 226 aa overlap (67-292:17-242)
40 50 60 70 80 90
pF1KB9 RYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRK
::::::::::::::::::::::::::::::
NP_001 MKSAGGSGRSLLPSPRVCEEQRCEEEVFPLAMNYLDRYLSCVPTRK
10 20 30 40
100 110 120 130 140 150
pF1KB9 AQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVI
50 60 70 80 90 100
160 170 180 190 200 210
pF1KB9 AHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLG
110 120 130 140 150 160
220 230 240 250 260 270
pF1KB9 ACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQ
::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::
NP_001 ACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREASQTSSSPAPKAPRGSSSQ
170 180 190 200 210 220
280 290
pF1KB9 GPSQTSTPTDVTAIHL
::::::::::::::::
NP_001 GPSQTSTPTDVTAIHL
230 240
>>NP_001129489 (OMIM: 123834) G1/S-specific cyclin-D3 is (211 aa)
initn: 1373 init1: 1373 opt: 1373 Z-score: 1536.3 bits: 291.8 E(85289): 7.8e-79
Smith-Waterman score: 1373; 99.5% identity (100.0% similar) in 211 aa overlap (82-292:1-211)
60 70 80 90 100 110
pF1KB9 IKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLAS
::::::::::::::::::::::::::::::
NP_001 MNYLDRYLSCVPTRKAQLQLLGAVCMLLAS
10 20 30
120 130 140 150 160 170
pF1KB9 KLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLP
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB9 RDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAG
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB9 ITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIH
:::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::
NP_001 ITGTEVDCLRACQEQIEAALRESLREASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIH
160 170 180 190 200 210
pF1KB9 L
:
NP_001 L
>>XP_011513273 (OMIM: 123834) PREDICTED: G1/S-specific c (276 aa)
initn: 1302 init1: 1302 opt: 1304 Z-score: 1457.8 bits: 277.6 E(85289): 1.8e-74
Smith-Waterman score: 1310; 75.5% identity (80.6% similar) in 278 aa overlap (1-278:1-268)
10 20 30 40 50 60
pF1KB9 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKML
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 AYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 IEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 HAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCL
::::::::::: : .. .:. . .:: :.: :.: . : .
XP_011 HAQTFLALCATGL-----PAGL--SGADRSCTQGEPQGSLS-DQLQPSAQSPPGLQQP--
190 200 210 220 230
250 260 270 280 290
pF1KB9 RACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL
:: .: . : . :. : : :: :
XP_011 RAQPDQHSYRCHSHTPVALERPSGVATKQRRGRCHPPPCLQEPHHI
240 250 260 270
>>NP_001750 (OMIM: 123833,615938) G1/S-specific cyclin-D (289 aa)
initn: 1170 init1: 977 opt: 1173 Z-score: 1311.7 bits: 250.7 E(85289): 2.5e-66
Smith-Waterman score: 1173; 61.6% identity (81.8% similar) in 297 aa overlap (1-292:1-289)
10 20 30 40 50 60
pF1KB9 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKML
::::: : . . :: : :: :.::::.:: .::::.:. :::.:::..:.:.::.:.
NP_001 MELLCHE-VDPVRRAVRDRNLLRDDRVLQNLLTIEERYLPQCSYFKCVQKDIQPYMRRMV
10 20 30 40 50
70 80 90 100 110 120
pF1KB9 AYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLT
: :::::::::.:::::::::::::::.:. ::: :..:::::::::.:::::.::.:::
NP_001 ATWMLEVCEEQKCEEEVFPLAMNYLDRFLAGVPTPKSHLQLLGAVCMFLASKLKETSPLT
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB9 IEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKK
::::::::....:..: .::..:::::::.:::: :::. ::..: :.. .:..:
NP_001 AEKLCIYTDNSIKPQELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPQQREKLSLIRK
120 130 140 150 160 170
190 200 210 220 230
pF1KB9 HAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLG----ACSMSGDELTELLAGITGTE
:::::.::::::. :::::::::::::.:::. :: . :.. : :::::: ::.:.
NP_001 HAQTFIALCATDFKFAMYPPSMIATGSVGAAICGLQQDEEVSSLTCDALTELLAKITNTD
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB9 VDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQGP-SQTSTPTDVTAIHL
::::.::::::::.: .::.. : . . ::.:. .:.:::::: : :
NP_001 VDCLKACQEQIEAVLLNSLQQYRQDQRD-------GSKSEDELDQASTPTDVRDIDL
240 250 260 270 280
>>NP_001129597 (OMIM: 123834) G1/S-specific cyclin-D3 is (220 aa)
initn: 1004 init1: 1004 opt: 1004 Z-score: 1125.2 bits: 215.8 E(85289): 6.2e-56
Smith-Waterman score: 1313; 75.0% identity (75.3% similar) in 292 aa overlap (1-292:1-220)
10 20 30 40 50 60
pF1KB9 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKML
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 AYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLT
::::::
NP_001 AYWMLE------------------------------------------------------
130 140 150 160 170 180
pF1KB9 IEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKK
::::::::::::::::::::::::::::::::::::::::::
NP_001 ------------------DWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKK
70 80 90 100
190 200 210 220 230 240
pF1KB9 HAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCL
110 120 130 140 150 160
250 260 270 280 290
pF1KB9 RACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL
::::::::::::::::::.:::::::::::::::::::::::::::::::::
NP_001 RACQEQIEAALRESLREASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL
170 180 190 200 210 220
>>NP_444284 (OMIM: 168461,193300,254500) G1/S-specific c (295 aa)
initn: 992 init1: 809 opt: 992 Z-score: 1110.0 bits: 213.4 E(85289): 4.3e-55
Smith-Waterman score: 992; 51.9% identity (75.6% similar) in 295 aa overlap (2-292:4-295)
10 20 30 40 50
pF1KB9 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRK
.::::: .. :: :: ::.: :::...:. :: .: .:::.:::.:. : :::
NP_444 MEHQLLCCE-VETIRRAYPDANLLND-RVLRAMLKAEETCAPSVSYFKCVQKEVLPSMRK
10 20 30 40 50
60 70 80 90 100 110
pF1KB9 MLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTP
..: :::::::::.:::::::::::::::.:: :..:..::::::.::..:::..:: :
NP_444 IVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVASKMKETIP
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB9 LTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALV
:: ::::::::... :..: . :.:...::::.:::. :::. .: .. .. . ..
NP_444 LTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEAEENKQII
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB9 KKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACS----MSGDELTELLAGITG
.::::::.:::::: : ::::.:.::. ::::::. : .: .::..:. .
NP_444 RKHAQTFVALCATDVKFISNPPSMVAAGSVVAAVQGLNLRSPNNFLSYYRLTRFLSRVIK
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB9 TEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL
. :::::::::::: :. :::.: : . .: . . . . ::::: . .
NP_444 CDPDCLRACQEQIEALLESSLRQA-QQNMDPKAAEEEEEEEEEVDLACTPTDVRDVDI
240 250 260 270 280 290
>>XP_011513274 (OMIM: 123834) PREDICTED: G1/S-specific c (195 aa)
initn: 726 init1: 726 opt: 728 Z-score: 818.7 bits: 158.9 E(85289): 7.3e-39
Smith-Waterman score: 734; 65.5% identity (72.6% similar) in 197 aa overlap (82-278:1-187)
60 70 80 90 100 110
pF1KB9 IKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLAS
::::::::::::::::::::::::::::::
XP_011 MNYLDRYLSCVPTRKAQLQLLGAVCMLLAS
10 20 30
120 130 140 150 160 170
pF1KB9 KLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLP
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB9 RDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAG
:::::::::::::::::::: : .. .:. . .:: :.: :.: .
XP_011 RDRQALVKKHAQTFLALCATGL-----PAGL--SGADRSCTQGEPQGSLS-DQLQPSAQS
100 110 120 130 140
240 250 260 270 280 290
pF1KB9 ITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIH
: . :: .: . : . :. : : :: :
XP_011 PPGLQQP--RAQPDQHSYRCHSHTPVALERPSGVATKQRRGRCHPPPCLQEPHHI
150 160 170 180 190
pF1KB9 L
>>NP_001274363 (OMIM: 123834) G1/S-specific cyclin-D3 is (96 aa)
initn: 613 init1: 613 opt: 613 Z-score: 695.1 bits: 135.0 E(85289): 5.6e-32
Smith-Waterman score: 613; 99.0% identity (100.0% similar) in 96 aa overlap (197-292:1-96)
170 180 190 200 210 220
pF1KB9 RLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELT
::::::::::::::::::::::::::::::
NP_001 MYPPSMIATGSIGAAVQGLGACSMSGDELT
10 20 30
230 240 250 260 270 280
pF1KB9 ELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQGPSQTSTPTD
::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::
NP_001 ELLAGITGTEVDCLRACQEQIEAALRESLREASQTSSSPAPKAPRGSSSQGPSQTSTPTD
40 50 60 70 80 90
290
pF1KB9 VTAIHL
::::::
NP_001 VTAIHL
>>NP_001129598 (OMIM: 123834) G1/S-specific cyclin-D3 is (96 aa)
initn: 613 init1: 613 opt: 613 Z-score: 695.1 bits: 135.0 E(85289): 5.6e-32
Smith-Waterman score: 613; 99.0% identity (100.0% similar) in 96 aa overlap (197-292:1-96)
170 180 190 200 210 220
pF1KB9 RLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELT
::::::::::::::::::::::::::::::
NP_001 MYPPSMIATGSIGAAVQGLGACSMSGDELT
10 20 30
230 240 250 260 270 280
pF1KB9 ELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQGPSQTSTPTD
::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::
NP_001 ELLAGITGTEVDCLRACQEQIEAALRESLREASQTSSSPAPKAPRGSSSQGPSQTSTPTD
40 50 60 70 80 90
290
pF1KB9 VTAIHL
::::::
NP_001 VTAIHL
292 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 18:22:56 2016 done: Thu Nov 3 18:22:58 2016
Total Scan time: 8.200 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]