Result of FASTA (omim) for
pF1KB9394
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9394, 388 aa
1>>>pF1KB9394 388 - 388 aa - 388 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4656+/-0.000416; mu= 15.7464+/- 0.026
mean_var=70.0764+/-14.334, 0's: 0 Z-trim(111.7): 48 B-trim: 0 in 0/54
Lambda= 0.153210
statistics sampled from 20325 (20373) to 20325 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.603), E-opt: 0.2 (0.239), width: 16
Scan time: 7.810
The best scores are: opt bits E(85289)
NP_004767 (OMIM: 604016) beta-1,4-galactosyltransf ( 388) 2676 600.9 1.6e-171
NP_004766 (OMIM: 604017) beta-1,4-galactosyltransf ( 382) 1966 444.0 2.8e-124
XP_005258444 (OMIM: 604017) PREDICTED: beta-1,4-ga ( 370) 1808 409.0 9e-114
XP_016881578 (OMIM: 604017) PREDICTED: beta-1,4-ga ( 338) 1775 401.7 1.3e-111
XP_006722642 (OMIM: 604017) PREDICTED: beta-1,4-ga ( 338) 1775 401.7 1.3e-111
NP_001317499 (OMIM: 604017) beta-1,4-galactosyltra ( 343) 1683 381.4 1.8e-105
XP_006722641 (OMIM: 604017) PREDICTED: beta-1,4-ga ( 344) 1537 349.1 9.1e-96
XP_016881580 (OMIM: 604017) PREDICTED: beta-1,4-ga ( 269) 1339 305.3 1.1e-82
XP_016881579 (OMIM: 604017) PREDICTED: beta-1,4-ga ( 274) 1339 305.3 1.1e-82
XP_016881581 (OMIM: 604017) PREDICTED: beta-1,4-ga ( 202) 1198 274.1 2.1e-73
XP_005245623 (OMIM: 604014) PREDICTED: beta-1,4-ga ( 393) 853 198.0 3.3e-50
NP_001186803 (OMIM: 604014) beta-1,4-galactosyltra ( 393) 853 198.0 3.3e-50
NP_003770 (OMIM: 604014) beta-1,4-galactosyltransf ( 393) 853 198.0 3.3e-50
NP_001186802 (OMIM: 604014) beta-1,4-galactosyltra ( 393) 853 198.0 3.3e-50
NP_001488 (OMIM: 137060,607091) beta-1,4-galactosy ( 398) 833 193.5 7.2e-49
XP_016858206 (OMIM: 604013) PREDICTED: beta-1,4-ga ( 372) 811 188.7 2e-47
NP_003771 (OMIM: 604013) beta-1,4-galactosyltransf ( 372) 811 188.7 2e-47
XP_016858205 (OMIM: 604013) PREDICTED: beta-1,4-ga ( 372) 811 188.7 2e-47
NP_001005417 (OMIM: 604013) beta-1,4-galactosyltra ( 372) 811 188.7 2e-47
NP_085076 (OMIM: 604013) beta-1,4-galactosyltransf ( 401) 811 188.7 2.1e-47
XP_011508395 (OMIM: 604014) PREDICTED: beta-1,4-ga ( 310) 802 186.6 6.7e-47
XP_016858203 (OMIM: 604014) PREDICTED: beta-1,4-ga ( 310) 802 186.6 6.7e-47
XP_011511562 (OMIM: 604015) PREDICTED: beta-1,4-ga ( 344) 723 169.2 1.3e-41
NP_997708 (OMIM: 604015) beta-1,4-galactosyltransf ( 344) 723 169.2 1.3e-41
XP_006713861 (OMIM: 604015) PREDICTED: beta-1,4-ga ( 344) 723 169.2 1.3e-41
NP_003769 (OMIM: 604015) beta-1,4-galactosyltransf ( 344) 723 169.2 1.3e-41
XP_006713863 (OMIM: 604015) PREDICTED: beta-1,4-ga ( 344) 723 169.2 1.3e-41
XP_005247912 (OMIM: 604015) PREDICTED: beta-1,4-ga ( 344) 723 169.2 1.3e-41
XP_006713862 (OMIM: 604015) PREDICTED: beta-1,4-ga ( 344) 723 169.2 1.3e-41
XP_006713864 (OMIM: 604015) PREDICTED: beta-1,4-ga ( 344) 723 169.2 1.3e-41
XP_005251497 (OMIM: 137060,607091) PREDICTED: beta ( 357) 515 123.2 9.5e-28
XP_016858204 (OMIM: 604014) PREDICTED: beta-1,4-ga ( 227) 510 122.0 1.4e-27
XP_016862890 (OMIM: 604015) PREDICTED: beta-1,4-ga ( 303) 426 103.5 6.9e-22
NP_009186 (OMIM: 130070,604327) beta-1,4-galactosy ( 327) 426 103.5 7.4e-22
XP_016864488 (OMIM: 130070,604327) PREDICTED: beta ( 213) 344 85.3 1.5e-16
XP_006714879 (OMIM: 130070,604327) PREDICTED: beta ( 167) 253 65.1 1.4e-10
>>NP_004767 (OMIM: 604016) beta-1,4-galactosyltransferas (388 aa)
initn: 2676 init1: 2676 opt: 2676 Z-score: 3200.1 bits: 600.9 E(85289): 1.6e-171
Smith-Waterman score: 2676; 100.0% identity (100.0% similar) in 388 aa overlap (1-388:1-388)
10 20 30 40 50 60
pF1KB9 MRARRGLLRLPRRSLLAALFFFSLSSSLLYFVYVAPGIVNTYLFMMQAQGILIRDNVRTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MRARRGLLRLPRRSLLAALFFFSLSSSLLYFVYVAPGIVNTYLFMMQAQGILIRDNVRTI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 GAQVYEQVLRSAYAKRNSSVNDSDYPLDLNHSETFLQTTTFLPEDFTYFANHTCPERLPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 GAQVYEQVLRSAYAKRNSSVNDSDYPLDLNHSETFLQTTTFLPEDFTYFANHTCPERLPS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 MKGPIDINMSEIGMDYIHELFSKDPTIKLGGHWKPSDCMPRWKVAILIPFRNRHEHLPVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MKGPIDINMSEIGMDYIHELFSKDPTIKLGGHWKPSDCMPRWKVAILIPFRNRHEHLPVL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 FRHLLPMLQRQRLQFAFYVVEQVGTQPFNRAMLFNVGFQEAMKDLDWDCLIFHDVDHIPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 FRHLLPMLQRQRLQFAFYVVEQVGTQPFNRAMLFNVGFQEAMKDLDWDCLIFHDVDHIPE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 SDRNYYGCGQMPRHFATKLDKYMYLLPYTEFFGGVSGLTVEQFRKINGFPNAFWGWGGED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 SDRNYYGCGQMPRHFATKLDKYMYLLPYTEFFGGVSGLTVEQFRKINGFPNAFWGWGGED
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 DDLWNRVQNAGYSVSRPEGDTGKYKSIPHHHRGEVQFLGRYALLRKSKERQGLDGLNNLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 DDLWNRVQNAGYSVSRPEGDTGKYKSIPHHHRGEVQFLGRYALLRKSKERQGLDGLNNLN
310 320 330 340 350 360
370 380
pF1KB9 YFANITYDALYKNITVNLTPELAQVNEY
::::::::::::::::::::::::::::
NP_004 YFANITYDALYKNITVNLTPELAQVNEY
370 380
>>NP_004766 (OMIM: 604017) beta-1,4-galactosyltransferas (382 aa)
initn: 1966 init1: 1706 opt: 1966 Z-score: 2352.1 bits: 444.0 E(85289): 2.8e-124
Smith-Waterman score: 1966; 70.6% identity (87.1% similar) in 388 aa overlap (1-388:1-382)
10 20 30 40 50 60
pF1KB9 MRARRGLLRLPRRSLLAALFFFSLSSSLLYFVYVAPGIVNTYLFMMQAQGILIRDNVRTI
: . : ..:. ::::: .:::::::: :::.::::::.::::::.::.::..:.::.::
NP_004 MSVLRRMMRVSNRSLLAFIFFFSLSSSCLYFIYVAPGIANTYLFMVQARGIMLRENVKTI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 GAQVYEQVLRSAYAKRNSSVNDSDYPLDLNHSETFLQTTTFLPEDFTYFANHTCPERLPS
: ...: :...::..: .::: : :. ..::::.:::.::: :::.::
NP_004 G-----HMIR-LYTNKNSTLNGTDYPEGNNSSDYLVQTTTYLPENFTYSPYLPCPEKLPY
70 80 90 100 110
130 140 150 160 170 180
pF1KB9 MKGPIDINMSEIGMDYIHELFSKDPTIKLGGHWKPSDCMPRWKVAILIPFRNRHEHLPVL
:.: ...:.::...: ::.::::: :. ::::.:.:: ::::::.::::::::::::..
NP_004 MRGFLNVNVSEVSFDEIHQLFSKDLDIEPGGHWRPKDCKPRWKVAVLIPFRNRHEHLPIF
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB9 FRHLLPMLQRQRLQFAFYVVEQVGTQPFNRAMLFNVGFQEAMKDLDWDCLIFHDVDHIPE
: ::.::::.:::.:::::.::.:::::::::::::::.::::: :::.:::::::.::
NP_004 FLHLIPMLQKQRLEFAFYVIEQTGTQPFNRAMLFNVGFKEAMKDSVWDCVIFHDVDHLPE
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB9 SDRNYYGCGQMPRHFATKLDKYMYLLPYTEFFGGVSGLTVEQFRKINGFPNAFWGWGGED
.::::::::.::::::.:::::::.::: :::::::::::::::::::::::::::::::
NP_004 NDRNYYGCGEMPRHFAAKLDKYMYILPYKEFFGGVSGLTVEQFRKINGFPNAFWGWGGED
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB9 DDLWNRVQNAGYSVSRPEGDTGKYKSIPHHHRGEVQFLGRYALLRKSKERQGLDGLNNLN
:::::::. :::.:.::::: :::::::::::::::::::: ::: ::::: .::::::
NP_004 DDLWNRVHYAGYNVTRPEGDLGKYKSIPHHHRGEVQFLGRYKLLRYSKERQYIDGLNNLI
300 310 320 330 340 350
370 380
pF1KB9 YFANITYDALYKNITVNLTPELAQVNEY
: .: : :: ::.::: :::: ...:
NP_004 YRPKILVDRLYTNISVNLMPELAPIEDY
360 370 380
>>XP_005258444 (OMIM: 604017) PREDICTED: beta-1,4-galact (370 aa)
initn: 1808 init1: 1706 opt: 1808 Z-score: 2163.5 bits: 409.0 E(85289): 9e-114
Smith-Waterman score: 1808; 71.1% identity (87.1% similar) in 349 aa overlap (40-388:28-370)
10 20 30 40 50 60
pF1KB9 LPRRSLLAALFFFSLSSSLLYFVYVAPGIVNTYLFMMQAQGILIRDNVRTIGAQVYEQVL
::::::.::.::..:.::.::: ..
XP_005 MEPNSEPKSQSIPEAELTSGRKQKTPANTYLFMVQARGIMLRENVKTIGHMIR----
10 20 30 40 50
70 80 90 100 110 120
pF1KB9 RSAYAKRNSSVNDSDYPLDLNHSETFLQTTTFLPEDFTYFANHTCPERLPSMKGPIDINM
:...::..: .::: : :. ..::::.:::.::: :::.:: :.: ...:.
XP_005 --LYTNKNSTLNGTDYPEGNNSSDYLVQTTTYLPENFTYSPYLPCPEKLPYMRGFLNVNV
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB9 SEIGMDYIHELFSKDPTIKLGGHWKPSDCMPRWKVAILIPFRNRHEHLPVLFRHLLPMLQ
::...: ::.::::: :. ::::.:.:: ::::::.::::::::::::..: ::.::::
XP_005 SEVSFDEIHQLFSKDLDIEPGGHWRPKDCKPRWKVAVLIPFRNRHEHLPIFFLHLIPMLQ
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB9 RQRLQFAFYVVEQVGTQPFNRAMLFNVGFQEAMKDLDWDCLIFHDVDHIPESDRNYYGCG
.:::.:::::.::.:::::::::::::::.::::: :::.:::::::.::.::::::::
XP_005 KQRLEFAFYVIEQTGTQPFNRAMLFNVGFKEAMKDSVWDCVIFHDVDHLPENDRNYYGCG
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB9 QMPRHFATKLDKYMYLLPYTEFFGGVSGLTVEQFRKINGFPNAFWGWGGEDDDLWNRVQN
.::::::.:::::::.::: ::::::::::::::::::::::::::::::::::::::.
XP_005 EMPRHFAAKLDKYMYILPYKEFFGGVSGLTVEQFRKINGFPNAFWGWGGEDDDLWNRVHY
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB9 AGYSVSRPEGDTGKYKSIPHHHRGEVQFLGRYALLRKSKERQGLDGLNNLNYFANITYDA
:::.:.::::: :::::::::::::::::::: ::: ::::: .:::::: : .: :
XP_005 AGYNVTRPEGDLGKYKSIPHHHRGEVQFLGRYKLLRYSKERQYIDGLNNLIYRPKILVDR
300 310 320 330 340 350
370 380
pF1KB9 LYKNITVNLTPELAQVNEY
:: ::.::: :::: ...:
XP_005 LYTNISVNLMPELAPIEDY
360 370
>>XP_016881578 (OMIM: 604017) PREDICTED: beta-1,4-galact (338 aa)
initn: 1767 init1: 1706 opt: 1775 Z-score: 2124.7 bits: 401.7 E(85289): 1.3e-111
Smith-Waterman score: 1775; 70.6% identity (86.9% similar) in 344 aa overlap (45-388:1-338)
20 30 40 50 60 70
pF1KB9 LLAALFFFSLSSSLLYFVYVAPGIVNTYLFMMQAQGILIRDNVRTIGAQVYEQVLRSAYA
:.::.::..:.::.::: .. :.
XP_016 MVQARGIMLRENVKTIGHMIR------LYT
10 20
80 90 100 110 120 130
pF1KB9 KRNSSVNDSDYPLDLNHSETFLQTTTFLPEDFTYFANHTCPERLPSMKGPIDINMSEIGM
..::..: .::: : :. ..::::.:::.::: :::.:: :.: ...:.::...
XP_016 NKNSTLNGTDYPEGNNSSDYLVQTTTYLPENFTYSPYLPCPEKLPYMRGFLNVNVSEVSF
30 40 50 60 70 80
140 150 160 170 180 190
pF1KB9 DYIHELFSKDPTIKLGGHWKPSDCMPRWKVAILIPFRNRHEHLPVLFRHLLPMLQRQRLQ
: ::.::::: :. ::::.:.:: ::::::.::::::::::::..: ::.::::.:::.
XP_016 DEIHQLFSKDLDIEPGGHWRPKDCKPRWKVAVLIPFRNRHEHLPIFFLHLIPMLQKQRLE
90 100 110 120 130 140
200 210 220 230 240 250
pF1KB9 FAFYVVEQVGTQPFNRAMLFNVGFQEAMKDLDWDCLIFHDVDHIPESDRNYYGCGQMPRH
:::::.::.:::::::::::::::.::::: :::.:::::::.::.::::::::.::::
XP_016 FAFYVIEQTGTQPFNRAMLFNVGFKEAMKDSVWDCVIFHDVDHLPENDRNYYGCGEMPRH
150 160 170 180 190 200
260 270 280 290 300 310
pF1KB9 FATKLDKYMYLLPYTEFFGGVSGLTVEQFRKINGFPNAFWGWGGEDDDLWNRVQNAGYSV
::.:::::::.::: ::::::::::::::::::::::::::::::::::::::. :::.:
XP_016 FAAKLDKYMYILPYKEFFGGVSGLTVEQFRKINGFPNAFWGWGGEDDDLWNRVHYAGYNV
210 220 230 240 250 260
320 330 340 350 360 370
pF1KB9 SRPEGDTGKYKSIPHHHRGEVQFLGRYALLRKSKERQGLDGLNNLNYFANITYDALYKNI
.::::: :::::::::::::::::::: ::: ::::: .:::::: : .: : :: ::
XP_016 TRPEGDLGKYKSIPHHHRGEVQFLGRYKLLRYSKERQYIDGLNNLIYRPKILVDRLYTNI
270 280 290 300 310 320
380
pF1KB9 TVNLTPELAQVNEY
.::: :::: ...:
XP_016 SVNLMPELAPIEDY
330
>>XP_006722642 (OMIM: 604017) PREDICTED: beta-1,4-galact (338 aa)
initn: 1767 init1: 1706 opt: 1775 Z-score: 2124.7 bits: 401.7 E(85289): 1.3e-111
Smith-Waterman score: 1775; 70.6% identity (86.9% similar) in 344 aa overlap (45-388:1-338)
20 30 40 50 60 70
pF1KB9 LLAALFFFSLSSSLLYFVYVAPGIVNTYLFMMQAQGILIRDNVRTIGAQVYEQVLRSAYA
:.::.::..:.::.::: .. :.
XP_006 MVQARGIMLRENVKTIGHMIR------LYT
10 20
80 90 100 110 120 130
pF1KB9 KRNSSVNDSDYPLDLNHSETFLQTTTFLPEDFTYFANHTCPERLPSMKGPIDINMSEIGM
..::..: .::: : :. ..::::.:::.::: :::.:: :.: ...:.::...
XP_006 NKNSTLNGTDYPEGNNSSDYLVQTTTYLPENFTYSPYLPCPEKLPYMRGFLNVNVSEVSF
30 40 50 60 70 80
140 150 160 170 180 190
pF1KB9 DYIHELFSKDPTIKLGGHWKPSDCMPRWKVAILIPFRNRHEHLPVLFRHLLPMLQRQRLQ
: ::.::::: :. ::::.:.:: ::::::.::::::::::::..: ::.::::.:::.
XP_006 DEIHQLFSKDLDIEPGGHWRPKDCKPRWKVAVLIPFRNRHEHLPIFFLHLIPMLQKQRLE
90 100 110 120 130 140
200 210 220 230 240 250
pF1KB9 FAFYVVEQVGTQPFNRAMLFNVGFQEAMKDLDWDCLIFHDVDHIPESDRNYYGCGQMPRH
:::::.::.:::::::::::::::.::::: :::.:::::::.::.::::::::.::::
XP_006 FAFYVIEQTGTQPFNRAMLFNVGFKEAMKDSVWDCVIFHDVDHLPENDRNYYGCGEMPRH
150 160 170 180 190 200
260 270 280 290 300 310
pF1KB9 FATKLDKYMYLLPYTEFFGGVSGLTVEQFRKINGFPNAFWGWGGEDDDLWNRVQNAGYSV
::.:::::::.::: ::::::::::::::::::::::::::::::::::::::. :::.:
XP_006 FAAKLDKYMYILPYKEFFGGVSGLTVEQFRKINGFPNAFWGWGGEDDDLWNRVHYAGYNV
210 220 230 240 250 260
320 330 340 350 360 370
pF1KB9 SRPEGDTGKYKSIPHHHRGEVQFLGRYALLRKSKERQGLDGLNNLNYFANITYDALYKNI
.::::: :::::::::::::::::::: ::: ::::: .:::::: : .: : :: ::
XP_006 TRPEGDLGKYKSIPHHHRGEVQFLGRYKLLRYSKERQYIDGLNNLIYRPKILVDRLYTNI
270 280 290 300 310 320
380
pF1KB9 TVNLTPELAQVNEY
.::: :::: ...:
XP_006 SVNLMPELAPIEDY
330
>>NP_001317499 (OMIM: 604017) beta-1,4-galactosyltransfe (343 aa)
initn: 1827 init1: 1683 opt: 1683 Z-score: 2014.7 bits: 381.4 E(85289): 1.8e-105
Smith-Waterman score: 1741; 65.2% identity (77.6% similar) in 388 aa overlap (1-388:1-343)
10 20 30 40 50 60
pF1KB9 MRARRGLLRLPRRSLLAALFFFSLSSSLLYFVYVAPGIVNTYLFMMQAQGILIRDNVRTI
: . : ..:. ::::: .:::::::: :::.::::::
NP_001 MSVLRRMMRVSNRSLLAFIFFFSLSSSCLYFIYVAPGI----------------------
10 20 30
70 80 90 100 110 120
pF1KB9 GAQVYEQVLRSAYAKRNSSVNDSDYPLDLNHSETFLQTTTFLPEDFTYFANHTCPERLPS
::: : :. ..::::.:::.::: :::.::
NP_001 -----------------------DYPEGNNSSDYLVQTTTYLPENFTYSPYLPCPEKLPY
40 50 60 70
130 140 150 160 170 180
pF1KB9 MKGPIDINMSEIGMDYIHELFSKDPTIKLGGHWKPSDCMPRWKVAILIPFRNRHEHLPVL
:.: ...:.::...: ::.::::: :. ::::.:.:: ::::::.::::::::::::..
NP_001 MRGFLNVNVSEVSFDEIHQLFSKDLDIEPGGHWRPKDCKPRWKVAVLIPFRNRHEHLPIF
80 90 100 110 120 130
190 200 210 220 230 240
pF1KB9 FRHLLPMLQRQRLQFAFYVVEQVGTQPFNRAMLFNVGFQEAMKDLDWDCLIFHDVDHIPE
: ::.::::.:::.:::::.::.:::::::::::::::.::::: :::.:::::::.::
NP_001 FLHLIPMLQKQRLEFAFYVIEQTGTQPFNRAMLFNVGFKEAMKDSVWDCVIFHDVDHLPE
140 150 160 170 180 190
250 260 270 280 290 300
pF1KB9 SDRNYYGCGQMPRHFATKLDKYMYLLPYTEFFGGVSGLTVEQFRKINGFPNAFWGWGGED
.::::::::.::::::.:::::::.::: :::::::::::::::::::::::::::::::
NP_001 NDRNYYGCGEMPRHFAAKLDKYMYILPYKEFFGGVSGLTVEQFRKINGFPNAFWGWGGED
200 210 220 230 240 250
310 320 330 340 350 360
pF1KB9 DDLWNRVQNAGYSVSRPEGDTGKYKSIPHHHRGEVQFLGRYALLRKSKERQGLDGLNNLN
:::::::. :::.:.::::: :::::::::::::::::::: ::: ::::: .::::::
NP_001 DDLWNRVHYAGYNVTRPEGDLGKYKSIPHHHRGEVQFLGRYKLLRYSKERQYIDGLNNLI
260 270 280 290 300 310
370 380
pF1KB9 YFANITYDALYKNITVNLTPELAQVNEY
: .: : :: ::.::: :::: ...:
NP_001 YRPKILVDRLYTNISVNLMPELAPIEDY
320 330 340
>>XP_006722641 (OMIM: 604017) PREDICTED: beta-1,4-galact (344 aa)
initn: 1758 init1: 1517 opt: 1537 Z-score: 1840.3 bits: 349.1 E(85289): 9.1e-96
Smith-Waterman score: 1733; 65.2% identity (79.9% similar) in 388 aa overlap (1-388:1-344)
10 20 30 40 50 60
pF1KB9 MRARRGLLRLPRRSLLAALFFFSLSSSLLYFVYVAPGIVNTYLFMMQAQGILIRDNVRTI
: . : ..:. ::::: .:::::::: :::.::::::.::::::.::.::..:.::.::
XP_006 MSVLRRMMRVSNRSLLAFIFFFSLSSSCLYFIYVAPGIANTYLFMVQARGIMLRENVKTI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 GAQVYEQVLRSAYAKRNSSVNDSDYPLDLNHSETFLQTTTFLPEDFTYFANHTCPERLPS
: ...: :...::..: .
XP_006 G-----HMIR-LYTNKNSTLNGTG------------------------------------
70
130 140 150 160 170 180
pF1KB9 MKGPIDINMSEIGMDYIHELFSKDPTIKLGGHWKPSDCMPRWKVAILIPFRNRHEHLPVL
: ...:.::...: ::.::::: :. ::::.:.:: ::::::.::::::::::::..
XP_006 --GFLNVNVSEVSFDEIHQLFSKDLDIEPGGHWRPKDCKPRWKVAVLIPFRNRHEHLPIF
80 90 100 110 120 130
190 200 210 220 230 240
pF1KB9 FRHLLPMLQRQRLQFAFYVVEQVGTQPFNRAMLFNVGFQEAMKDLDWDCLIFHDVDHIPE
: ::.::::.:::.:::::.::.:::::::::::::::.::::: :::.:::::::.::
XP_006 FLHLIPMLQKQRLEFAFYVIEQTGTQPFNRAMLFNVGFKEAMKDSVWDCVIFHDVDHLPE
140 150 160 170 180 190
250 260 270 280 290 300
pF1KB9 SDRNYYGCGQMPRHFATKLDKYMYLLPYTEFFGGVSGLTVEQFRKINGFPNAFWGWGGED
.::::::::.::::::.:::::::.::: :::::::::::::::::::::::::::::::
XP_006 NDRNYYGCGEMPRHFAAKLDKYMYILPYKEFFGGVSGLTVEQFRKINGFPNAFWGWGGED
200 210 220 230 240 250
310 320 330 340 350 360
pF1KB9 DDLWNRVQNAGYSVSRPEGDTGKYKSIPHHHRGEVQFLGRYALLRKSKERQGLDGLNNLN
:::::::. :::.:.::::: :::::::::::::::::::: ::: ::::: .::::::
XP_006 DDLWNRVHYAGYNVTRPEGDLGKYKSIPHHHRGEVQFLGRYKLLRYSKERQYIDGLNNLI
260 270 280 290 300 310
370 380
pF1KB9 YFANITYDALYKNITVNLTPELAQVNEY
: .: : :: ::.::: :::: ...:
XP_006 YRPKILVDRLYTNISVNLMPELAPIEDY
320 330 340
>>XP_016881580 (OMIM: 604017) PREDICTED: beta-1,4-galact (269 aa)
initn: 1339 init1: 1339 opt: 1339 Z-score: 1605.4 bits: 305.3 E(85289): 1.1e-82
Smith-Waterman score: 1339; 81.3% identity (92.0% similar) in 225 aa overlap (164-388:45-269)
140 150 160 170 180 190
pF1KB9 MDYIHELFSKDPTIKLGGHWKPSDCMPRWKVAILIPFRNRHEHLPVLFRHLLPMLQRQRL
::.::::::::::::..: ::.::::.:::
XP_016 VIILFKQQRISRKTSHTHHTSPVQKSCLICVAVLIPFRNRHEHLPIFFLHLIPMLQKQRL
20 30 40 50 60 70
200 210 220 230 240 250
pF1KB9 QFAFYVVEQVGTQPFNRAMLFNVGFQEAMKDLDWDCLIFHDVDHIPESDRNYYGCGQMPR
.:::::.::.:::::::::::::::.::::: :::.:::::::.::.::::::::.:::
XP_016 EFAFYVIEQTGTQPFNRAMLFNVGFKEAMKDSVWDCVIFHDVDHLPENDRNYYGCGEMPR
80 90 100 110 120 130
260 270 280 290 300 310
pF1KB9 HFATKLDKYMYLLPYTEFFGGVSGLTVEQFRKINGFPNAFWGWGGEDDDLWNRVQNAGYS
:::.:::::::.::: ::::::::::::::::::::::::::::::::::::::. :::.
XP_016 HFAAKLDKYMYILPYKEFFGGVSGLTVEQFRKINGFPNAFWGWGGEDDDLWNRVHYAGYN
140 150 160 170 180 190
320 330 340 350 360 370
pF1KB9 VSRPEGDTGKYKSIPHHHRGEVQFLGRYALLRKSKERQGLDGLNNLNYFANITYDALYKN
:.::::: :::::::::::::::::::: ::: ::::: .:::::: : .: : :: :
XP_016 VTRPEGDLGKYKSIPHHHRGEVQFLGRYKLLRYSKERQYIDGLNNLIYRPKILVDRLYTN
200 210 220 230 240 250
380
pF1KB9 ITVNLTPELAQVNEY
:.::: :::: ...:
XP_016 ISVNLMPELAPIEDY
260
>>XP_016881579 (OMIM: 604017) PREDICTED: beta-1,4-galact (274 aa)
initn: 1339 init1: 1339 opt: 1339 Z-score: 1605.2 bits: 305.3 E(85289): 1.1e-82
Smith-Waterman score: 1339; 81.3% identity (92.0% similar) in 225 aa overlap (164-388:50-274)
140 150 160 170 180 190
pF1KB9 MDYIHELFSKDPTIKLGGHWKPSDCMPRWKVAILIPFRNRHEHLPVLFRHLLPMLQRQRL
::.::::::::::::..: ::.::::.:::
XP_016 VIILFKQQRISRKTSHTHHTSPVQKSCLICVAVLIPFRNRHEHLPIFFLHLIPMLQKQRL
20 30 40 50 60 70
200 210 220 230 240 250
pF1KB9 QFAFYVVEQVGTQPFNRAMLFNVGFQEAMKDLDWDCLIFHDVDHIPESDRNYYGCGQMPR
.:::::.::.:::::::::::::::.::::: :::.:::::::.::.::::::::.:::
XP_016 EFAFYVIEQTGTQPFNRAMLFNVGFKEAMKDSVWDCVIFHDVDHLPENDRNYYGCGEMPR
80 90 100 110 120 130
260 270 280 290 300 310
pF1KB9 HFATKLDKYMYLLPYTEFFGGVSGLTVEQFRKINGFPNAFWGWGGEDDDLWNRVQNAGYS
:::.:::::::.::: ::::::::::::::::::::::::::::::::::::::. :::.
XP_016 HFAAKLDKYMYILPYKEFFGGVSGLTVEQFRKINGFPNAFWGWGGEDDDLWNRVHYAGYN
140 150 160 170 180 190
320 330 340 350 360 370
pF1KB9 VSRPEGDTGKYKSIPHHHRGEVQFLGRYALLRKSKERQGLDGLNNLNYFANITYDALYKN
:.::::: :::::::::::::::::::: ::: ::::: .:::::: : .: : :: :
XP_016 VTRPEGDLGKYKSIPHHHRGEVQFLGRYKLLRYSKERQYIDGLNNLIYRPKILVDRLYTN
200 210 220 230 240 250
380
pF1KB9 ITVNLTPELAQVNEY
:.::: :::: ...:
XP_016 ISVNLMPELAPIEDY
260 270
>>XP_016881581 (OMIM: 604017) PREDICTED: beta-1,4-galact (202 aa)
initn: 1198 init1: 1198 opt: 1198 Z-score: 1438.8 bits: 274.1 E(85289): 2.1e-73
Smith-Waterman score: 1198; 81.7% identity (91.6% similar) in 202 aa overlap (187-388:1-202)
160 170 180 190 200 210
pF1KB9 DCMPRWKVAILIPFRNRHEHLPVLFRHLLPMLQRQRLQFAFYVVEQVGTQPFNRAMLFNV
:::.:::.:::::.::.:::::::::::::
XP_016 MLQKQRLEFAFYVIEQTGTQPFNRAMLFNV
10 20 30
220 230 240 250 260 270
pF1KB9 GFQEAMKDLDWDCLIFHDVDHIPESDRNYYGCGQMPRHFATKLDKYMYLLPYTEFFGGVS
::.::::: :::.:::::::.::.::::::::.::::::.:::::::.::: :::::::
XP_016 GFKEAMKDSVWDCVIFHDVDHLPENDRNYYGCGEMPRHFAAKLDKYMYILPYKEFFGGVS
40 50 60 70 80 90
280 290 300 310 320 330
pF1KB9 GLTVEQFRKINGFPNAFWGWGGEDDDLWNRVQNAGYSVSRPEGDTGKYKSIPHHHRGEVQ
:::::::::::::::::::::::::::::::. :::.:.::::: :::::::::::::::
XP_016 GLTVEQFRKINGFPNAFWGWGGEDDDLWNRVHYAGYNVTRPEGDLGKYKSIPHHHRGEVQ
100 110 120 130 140 150
340 350 360 370 380
pF1KB9 FLGRYALLRKSKERQGLDGLNNLNYFANITYDALYKNITVNLTPELAQVNEY
::::: ::: ::::: .:::::: : .: : :: ::.::: :::: ...:
XP_016 FLGRYKLLRYSKERQYIDGLNNLIYRPKILVDRLYTNISVNLMPELAPIEDY
160 170 180 190 200
388 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 13:18:56 2016 done: Sat Nov 5 13:18:58 2016
Total Scan time: 7.810 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]