Result of FASTA (omim) for
pF1KB9397
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9397, 650 aa
1>>>pF1KB9397 650 - 650 aa - 650 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.8947+/-0.00044; mu= 7.9319+/- 0.027
mean_var=165.9234+/-33.507, 0's: 0 Z-trim(117.0): 48 B-trim: 952 in 1/52
Lambda= 0.099568
statistics sampled from 28619 (28666) to 28619 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.683), E-opt: 0.2 (0.336), width: 16
Scan time: 12.190
The best scores are: opt bits E(85289)
NP_008982 (OMIM: 604460) FAS-associated factor 1 [ ( 650) 4274 626.6 8.8e-179
XP_016855625 (OMIM: 604460) PREDICTED: FAS-associa ( 541) 3464 510.1 8.1e-144
XP_011532777 (OMIM: 616935) PREDICTED: FAS-associa ( 400) 238 46.6 0.0002
NP_055428 (OMIM: 616935) FAS-associated factor 2 [ ( 445) 238 46.7 0.00022
NP_001269128 (OMIM: 602155) UBX domain-containing ( 229) 220 43.9 0.00078
XP_016869351 (OMIM: 602155) PREDICTED: UBX domain- ( 162) 199 40.8 0.0048
XP_011510973 (OMIM: 616379) PREDICTED: UBX domain- ( 341) 203 41.6 0.0058
NP_001269118 (OMIM: 602155) UBX domain-containing ( 233) 199 40.9 0.0064
NP_005662 (OMIM: 602155) UBX domain-containing pro ( 270) 199 40.9 0.0072
XP_011510972 (OMIM: 616379) PREDICTED: UBX domain- ( 456) 203 41.7 0.0073
NP_056377 (OMIM: 616379) UBX domain-containing pro ( 489) 203 41.7 0.0077
XP_011542957 (OMIM: 602155) PREDICTED: UBX domain- ( 327) 199 41.0 0.0083
>>NP_008982 (OMIM: 604460) FAS-associated factor 1 [Homo (650 aa)
initn: 4274 init1: 4274 opt: 4274 Z-score: 3330.7 bits: 626.6 E(85289): 8.8e-179
Smith-Waterman score: 4274; 100.0% identity (100.0% similar) in 650 aa overlap (1-650:1-650)
10 20 30 40 50 60
pF1KB9 MASNMDREMILADFQACTGIENIDEAITLLEQNNWDLVAAINGVIPQENGILQSEYGGET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 MASNMDREMILADFQACTGIENIDEAITLLEQNNWDLVAAINGVIPQENGILQSEYGGET
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 IPGPAFNPASHPASAPTSSSSSAFRPVMPSRQIVERQPRMLDFRVEYRDRNVDVVLEDTC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 IPGPAFNPASHPASAPTSSSSSAFRPVMPSRQIVERQPRMLDFRVEYRDRNVDVVLEDTC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 TVGEIKQILENELQIPVSKMLLKGWKTGDVEDSTVLKSLHLPKNNSLYVLTPDLPPPSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 TVGEIKQILENELQIPVSKMLLKGWKTGDVEDSTVLKSLHLPKNNSLYVLTPDLPPPSSS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 SHAGALQESLNQNFMLIITHREVQREYNLNFSGSSTIQEVKRNVYDLTSIPVRHQLWEGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 SHAGALQESLNQNFMLIITHREVQREYNLNFSGSSTIQEVKRNVYDLTSIPVRHQLWEGW
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 PTSATDDSMCLAESGLSYPCHRLTVGRRSSPAQTREQSEEQITDVHMVSDSDGDDFEDAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 PTSATDDSMCLAESGLSYPCHRLTVGRRSSPAQTREQSEEQITDVHMVSDSDGDDFEDAT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 EFGVDDGEVFGMASSALRKSPMMPENAENEGDALLQFTAEFSSRYGDCHPVFFIGSLEAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 EFGVDDGEVFGMASSALRKSPMMPENAENEGDALLQFTAEFSSRYGDCHPVFFIGSLEAA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 FQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKDSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 FQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKDSN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 RARFLTMCNRHFGSVVAQTIRTQKTDQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 RARFLTMCNRHFGSVVAQTIRTQKTDQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 MAAMEIFTAQQQEDIKDEDEREARENVKREQDEAYRLSLEADRAKREAHEREMAEQFRLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 MAAMEIFTAQQQEDIKDEDEREARENVKREQDEAYRLSLEADRAKREAHEREMAEQFRLE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 QIRKEQEEEREAIRLSLEQALPPEPKEENAEPVSKLRIRTPSGEFLERRFLASNKLQIVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 QIRKEQEEEREAIRLSLEQALPPEPKEENAEPVSKLRIRTPSGEFLERRFLASNKLQIVF
550 560 570 580 590 600
610 620 630 640 650
pF1KB9 DFVASKGFPWDEYKLLSTFPRRDVTQLDPNKSLLEVKLFPQETLFLEAKE
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 DFVASKGFPWDEYKLLSTFPRRDVTQLDPNKSLLEVKLFPQETLFLEAKE
610 620 630 640 650
>>XP_016855625 (OMIM: 604460) PREDICTED: FAS-associated (541 aa)
initn: 3464 init1: 3464 opt: 3464 Z-score: 2703.0 bits: 510.1 E(85289): 8.1e-144
Smith-Waterman score: 3464; 100.0% identity (100.0% similar) in 528 aa overlap (123-650:14-541)
100 110 120 130 140 150
pF1KB9 IVERQPRMLDFRVEYRDRNVDVVLEDTCTVGEIKQILENELQIPVSKMLLKGWKTGDVED
::::::::::::::::::::::::::::::
XP_016 MCLASTTSVTPPEGEIKQILENELQIPVSKMLLKGWKTGDVED
10 20 30 40
160 170 180 190 200 210
pF1KB9 STVLKSLHLPKNNSLYVLTPDLPPPSSSSHAGALQESLNQNFMLIITHREVQREYNLNFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 STVLKSLHLPKNNSLYVLTPDLPPPSSSSHAGALQESLNQNFMLIITHREVQREYNLNFS
50 60 70 80 90 100
220 230 240 250 260 270
pF1KB9 GSSTIQEVKRNVYDLTSIPVRHQLWEGWPTSATDDSMCLAESGLSYPCHRLTVGRRSSPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GSSTIQEVKRNVYDLTSIPVRHQLWEGWPTSATDDSMCLAESGLSYPCHRLTVGRRSSPA
110 120 130 140 150 160
280 290 300 310 320 330
pF1KB9 QTREQSEEQITDVHMVSDSDGDDFEDATEFGVDDGEVFGMASSALRKSPMMPENAENEGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QTREQSEEQITDVHMVSDSDGDDFEDATEFGVDDGEVFGMASSALRKSPMMPENAENEGD
170 180 190 200 210 220
340 350 360 370 380 390
pF1KB9 ALLQFTAEFSSRYGDCHPVFFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALLQFTAEFSSRYGDCHPVFFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCS
230 240 250 260 270 280
400 410 420 430 440 450
pF1KB9 QMLCAESIVSYLSQNFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQFPLFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QMLCAESIVSYLSQNFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQFPLFL
290 300 310 320 330 340
460 470 480 490 500 510
pF1KB9 IIMGKRSSNEVLNVIQGNTTVDELMMRLMAAMEIFTAQQQEDIKDEDEREARENVKREQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IIMGKRSSNEVLNVIQGNTTVDELMMRLMAAMEIFTAQQQEDIKDEDEREARENVKREQD
350 360 370 380 390 400
520 530 540 550 560 570
pF1KB9 EAYRLSLEADRAKREAHEREMAEQFRLEQIRKEQEEEREAIRLSLEQALPPEPKEENAEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EAYRLSLEADRAKREAHEREMAEQFRLEQIRKEQEEEREAIRLSLEQALPPEPKEENAEP
410 420 430 440 450 460
580 590 600 610 620 630
pF1KB9 VSKLRIRTPSGEFLERRFLASNKLQIVFDFVASKGFPWDEYKLLSTFPRRDVTQLDPNKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VSKLRIRTPSGEFLERRFLASNKLQIVFDFVASKGFPWDEYKLLSTFPRRDVTQLDPNKS
470 480 490 500 510 520
640 650
pF1KB9 LLEVKLFPQETLFLEAKE
::::::::::::::::::
XP_016 LLEVKLFPQETLFLEAKE
530 540
>>XP_011532777 (OMIM: 616935) PREDICTED: FAS-associated (400 aa)
initn: 443 init1: 114 opt: 238 Z-score: 200.4 bits: 46.6 E(85289): 0.0002
Smith-Waterman score: 449; 28.5% identity (57.2% similar) in 355 aa overlap (308-647:67-395)
280 290 300 310 320 330
pF1KB9 SEEQITDVHMVSDSDGDDFEDATEFGVDDGEVFGMASSALRKSPMMPENAENEGDALLQF
..: .: .: .: . .. :: ...:
XP_011 EQHNWNIEGLLGWGYYLIMLPFRFTYYTILDIFRFALRFIRPDPR-SRVTDPVGD-IVSF
40 50 60 70 80 90
340 350 360 370 380 390
pF1KB9 TAEFSSRYGDCHPVFFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCA
: .:: ::::. :. :...: :. ..: .::: :. .. :: . :::
XP_011 MHSFEEKYGRAHPVFYQGTYSQALNDA----KRELRFLLVYLHGDDHQDSDEFCRNTLCA
100 110 120 130 140 150
400 410 420 430 440 450
pF1KB9 ESIVSYLSQNFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQFPLFLIIMGK
..: .. .. :: :. : :.:..: . .:.. .:: :
XP_011 PEVISLINTRMLFWA-------------CSTNKPEGYRVSQALR---ENTYPFLAMIMLK
160 170 180 190
460 470 480 490 500 510
pF1KB9 RSSNEVLNVIQGNTTVDELMMRLMAAMEIFTAQQQEDIKDEDEREAREN---VKREQDEA
:.. ..: :.:. .: :. :.: .... ::: :.. ....::::
XP_011 DRRMTVVGRLEGLIQPDDLINQLTFIMD---ANQTYLVSERLEREERNQTQVLRQQQDEA
200 210 220 230 240 250
520 530 540 550 560
pF1KB9 YRLSLEAD----RAKREAHEREMAEQFRLEQIRKEQEEEREAIRLSLE---QALPPEPKE
: ::.:: : ::: .::. .. ...: . .:..:. .. : . :::::.
XP_011 YLASLRADQEKERKKREERERKRRKEEEVQQQKLAEERRRQNLQEEKERKLECLPPEPSP
260 270 280 290 300 310
570 580 590 600 610 620
pF1KB9 ENAEPVSKLRIRTPSGEFLERRFLASNKLQIVFDFVASKGFPWDEYKLLSTFPRRDVTQL
.. : : :. .. :. .:::: :..: .. ::. : ..... ..:::: . .
XP_011 DDPESV-KIIFKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCI
320 330 340 350 360 370
630 640 650
pF1KB9 D----PNK-SLLEVKLFPQETLFLEAKE
:: .: :. : :.::..
XP_011 PSEEWPNPPTLQEAGLSHTEVLFVQDLTDE
380 390 400
>>NP_055428 (OMIM: 616935) FAS-associated factor 2 [Homo (445 aa)
initn: 466 init1: 114 opt: 238 Z-score: 199.7 bits: 46.7 E(85289): 0.00022
Smith-Waterman score: 449; 28.5% identity (57.2% similar) in 355 aa overlap (308-647:112-440)
280 290 300 310 320 330
pF1KB9 SEEQITDVHMVSDSDGDDFEDATEFGVDDGEVFGMASSALRKSPMMPENAENEGDALLQF
..: .: .: .: . .. :: ...:
NP_055 VVSRPQPRGLLGWGYYLIMLPFRFTYYTILDIFRFALRFIRPDPR-SRVTDPVGD-IVSF
90 100 110 120 130
340 350 360 370 380 390
pF1KB9 TAEFSSRYGDCHPVFFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCA
: .:: ::::. :. :...: :. ..: .::: :. .. :: . :::
NP_055 MHSFEEKYGRAHPVFYQGTYSQALNDA----KRELRFLLVYLHGDDHQDSDEFCRNTLCA
140 150 160 170 180 190
400 410 420 430 440 450
pF1KB9 ESIVSYLSQNFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQFPLFLIIMGK
..: .. .. :: :. : :.:..: . .:.. .:: :
NP_055 PEVISLINTRMLFWA-------------CSTNKPEGYRVSQALR---ENTYPFLAMIMLK
200 210 220 230
460 470 480 490 500 510
pF1KB9 RSSNEVLNVIQGNTTVDELMMRLMAAMEIFTAQQQEDIKDEDEREAREN---VKREQDEA
:.. ..: :.:. .: :. :.: .... ::: :.. ....::::
NP_055 DRRMTVVGRLEGLIQPDDLINQLTFIMD---ANQTYLVSERLEREERNQTQVLRQQQDEA
240 250 260 270 280 290
520 530 540 550 560
pF1KB9 YRLSLEAD----RAKREAHEREMAEQFRLEQIRKEQEEEREAIRLSLE---QALPPEPKE
: ::.:: : ::: .::. .. ...: . .:..:. .. : . :::::.
NP_055 YLASLRADQEKERKKREERERKRRKEEEVQQQKLAEERRRQNLQEEKERKLECLPPEPSP
300 310 320 330 340 350
570 580 590 600 610 620
pF1KB9 ENAEPVSKLRIRTPSGEFLERRFLASNKLQIVFDFVASKGFPWDEYKLLSTFPRRDVTQL
.. : : :. .. :. .:::: :..: .. ::. : ..... ..:::: . .
NP_055 DDPESV-KIIFKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCI
360 370 380 390 400 410
630 640 650
pF1KB9 D----PNK-SLLEVKLFPQETLFLEAKE
:: .: :. : :.::..
NP_055 PSEEWPNPPTLQEAGLSHTEVLFVQDLTDE
420 430 440
>>NP_001269128 (OMIM: 602155) UBX domain-containing prot (229 aa)
initn: 163 init1: 163 opt: 220 Z-score: 189.8 bits: 43.9 E(85289): 0.00078
Smith-Waterman score: 220; 31.3% identity (62.0% similar) in 163 aa overlap (492-650:66-226)
470 480 490 500 510
pF1KB9 EVLNVIQGNTTVDELMMRLMAAMEIFTAQQQEDIKDEDER-EAREN-VKREQDEAYRLSL
: .:.:.:. : :.. :...:.:: .
NP_001 LLCGRILLLLALLTLIISVTTSWLNSFKSPQVYLKEEEEKNEKRQKLVRKKQQEAQGEKG
40 50 60 70 80 90
520 530 540 550 560 570
pF1KB9 EADRAKR--EAHEREMAEQFRLEQIRKEQEEEREAIRLSLEQALPPEPKEENAEPVSKLR
. .. :. .:: :.. : . : : . :: ::.. .:: : .
NP_001 DEGTSQTSFETSNREAAKSQNLPKPLTEFPSPAEQPTCKEIPDLPEEPSQ-TAEEVVTVA
100 110 120 130 140 150
580 590 600 610 620 630
pF1KB9 IRTPSGEFLERRFLASNKLQIVFDFVASKGFPWDEYKLLSTFPRRDVTQLDPNKSLLEVK
.: :::. :.:::: : . :..::... :. . :.: ..:::: .. .. ..:: ..
NP_001 LRCPSGNVLRRRFLKSYSSQVLFDWMTRIGYHISLYSLSTSFPRRPLA-VEGGQSLEDIG
160 170 180 190 200 210
640 650
pF1KB9 LFPQETLFLEAKE
. . .:.:: ::
NP_001 ITVDTVLILEEKEQTN
220
>>XP_016869351 (OMIM: 602155) PREDICTED: UBX domain-cont (162 aa)
initn: 163 init1: 163 opt: 199 Z-score: 175.7 bits: 40.8 E(85289): 0.0048
Smith-Waterman score: 199; 31.0% identity (58.9% similar) in 158 aa overlap (501-650:4-159)
480 490 500 510 520
pF1KB9 TTVDELMMRLMAAMEIFTAQQQEDIKDEDEREARENVKREQDEAYRLS----LEADRAKR
:. .: . ::..:: : .:..
XP_016 MKLRKLEERFYQMTGEAWKLSSGHKLGGDEGTS
10 20 30
530 540 550 560 570 580
pF1KB9 ----EAHEREMAEQFRLEQIRKEQEEEREAIRLSLEQALPPEPKEENAEPVSKLRIRTPS
:. .:: :.. : . : : . :: ::.. .:: : . .: ::
XP_016 QTSFETSNREAAKSQNLPKPLTEFPSPAEQPTCKEIPDLPEEPSQ-TAEEVVTVALRCPS
40 50 60 70 80 90
590 600 610 620 630 640
pF1KB9 GEFLERRFLASNKLQIVFDFVASKGFPWDEYKLLSTFPRRDVTQLDPNKSLLEVKLFPQE
:. :.:::: : . :..::... :. . :.: ..:::: .. .. ..:: .. . .
XP_016 GNVLRRRFLKSYSSQVLFDWMTRIGYHISLYSLSTSFPRRPLA-VEGGQSLEDIGITVDT
100 110 120 130 140 150
650
pF1KB9 TLFLEAKE
.:.:: ::
XP_016 VLILEEKEQTN
160
>>XP_011510973 (OMIM: 616379) PREDICTED: UBX domain-cont (341 aa)
initn: 194 init1: 156 opt: 203 Z-score: 174.2 bits: 41.6 E(85289): 0.0058
Smith-Waterman score: 203; 27.6% identity (58.6% similar) in 174 aa overlap (485-649:173-340)
460 470 480 490 500 510
pF1KB9 MGKRSSNEVLNVIQGNTTVDELMMRLMAAMEIFTAQQQE-DIKDEDEREARENVKREQDE
:.:..... .. ::.: ::. .
XP_011 EAAIRASLQETHFDSTQTKQDSRSDEESESELFSGSEEFISVCGSDEEEEVENLAKS---
150 160 170 180 190
520 530 540 550 560 570
pF1KB9 AYRLSLEADRAKR-EAHEREMAEQ-FRLEQIRKEQEEEREAIRLSLEQALPPEPKEENAE
: : . : ..: : ..: ..: : . ... :. . . .::: . .:
XP_011 --RKSPHKDLGHRKEENRRPLTEPPVRTDPGTATNHQGLPAVDSEILE-MPPEKADGVVE
200 210 220 230 240 250
580 590 600 610 620
pF1KB9 ------PVSKLRIRTPSGEFLERRFLASNKLQIVFDFVASKGFPWDEYKLLSTFPRRDVT
: ..: .: :.:. . . . :: . : :::.: ....::..:::: ..
XP_011 GIDVNGPKAQLMLRYPDGKREQITLPEQAKLLALVKHVQSKGYPNERFELLTNFPRRKLS
260 270 280 290 300 310
630 640 650
pF1KB9 QLDPNKSLLEVKLFPQETLFLEAKE
.:: . .: :. : ::::.:.. .
XP_011 HLDYDITLQEAGLCPQETVFVQERN
320 330 340
>>NP_001269118 (OMIM: 602155) UBX domain-containing prot (233 aa)
initn: 163 init1: 163 opt: 199 Z-score: 173.4 bits: 40.9 E(85289): 0.0064
Smith-Waterman score: 199; 31.0% identity (58.9% similar) in 158 aa overlap (501-650:75-230)
480 490 500 510 520
pF1KB9 TTVDELMMRLMAAMEIFTAQQQEDIKDEDEREARENVKREQDEAYRLS----LEADRAKR
:. .: . ::..:: : .:..
NP_001 LVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQMTGEAWKLSSGHKLGGDEGTS
50 60 70 80 90 100
530 540 550 560 570 580
pF1KB9 ----EAHEREMAEQFRLEQIRKEQEEEREAIRLSLEQALPPEPKEENAEPVSKLRIRTPS
:. .:: :.. : . : : . :: ::.. .:: : . .: ::
NP_001 QTSFETSNREAAKSQNLPKPLTEFPSPAEQPTCKEIPDLPEEPSQ-TAEEVVTVALRCPS
110 120 130 140 150 160
590 600 610 620 630 640
pF1KB9 GEFLERRFLASNKLQIVFDFVASKGFPWDEYKLLSTFPRRDVTQLDPNKSLLEVKLFPQE
:. :.:::: : . :..::... :. . :.: ..:::: .. .. ..:: .. . .
NP_001 GNVLRRRFLKSYSSQVLFDWMTRIGYHISLYSLSTSFPRRPLA-VEGGQSLEDIGITVDT
170 180 190 200 210 220
650
pF1KB9 TLFLEAKE
.:.:: ::
NP_001 VLILEEKEQTN
230
>>NP_005662 (OMIM: 602155) UBX domain-containing protein (270 aa)
initn: 163 init1: 163 opt: 199 Z-score: 172.5 bits: 40.9 E(85289): 0.0072
Smith-Waterman score: 199; 31.0% identity (58.9% similar) in 158 aa overlap (501-650:112-267)
480 490 500 510 520
pF1KB9 TTVDELMMRLMAAMEIFTAQQQEDIKDEDEREARENVKREQDEAYRLS----LEADRAKR
:. .: . ::..:: : .:..
NP_005 LVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQMTGEAWKLSSGHKLGGDEGTS
90 100 110 120 130 140
530 540 550 560 570 580
pF1KB9 ----EAHEREMAEQFRLEQIRKEQEEEREAIRLSLEQALPPEPKEENAEPVSKLRIRTPS
:. .:: :.. : . : : . :: ::.. .:: : . .: ::
NP_005 QTSFETSNREAAKSQNLPKPLTEFPSPAEQPTCKEIPDLPEEPSQ-TAEEVVTVALRCPS
150 160 170 180 190 200
590 600 610 620 630 640
pF1KB9 GEFLERRFLASNKLQIVFDFVASKGFPWDEYKLLSTFPRRDVTQLDPNKSLLEVKLFPQE
:. :.:::: : . :..::... :. . :.: ..:::: .. .. ..:: .. . .
NP_005 GNVLRRRFLKSYSSQVLFDWMTRIGYHISLYSLSTSFPRRPLA-VEGGQSLEDIGITVDT
210 220 230 240 250
650
pF1KB9 TLFLEAKE
.:.:: ::
NP_005 VLILEEKEQTN
260 270
>>XP_011510972 (OMIM: 616379) PREDICTED: UBX domain-cont (456 aa)
initn: 226 init1: 156 opt: 203 Z-score: 172.4 bits: 41.7 E(85289): 0.0073
Smith-Waterman score: 203; 27.6% identity (58.6% similar) in 174 aa overlap (485-649:288-455)
460 470 480 490 500 510
pF1KB9 MGKRSSNEVLNVIQGNTTVDELMMRLMAAMEIFTAQQQE-DIKDEDEREARENVKREQDE
:.:..... .. ::.: ::. .
XP_011 EAAIRASLQETHFDSTQTKQDSRSDEESESELFSGSEEFISVCGSDEEEEVENLAKS---
260 270 280 290 300 310
520 530 540 550 560 570
pF1KB9 AYRLSLEADRAKR-EAHEREMAEQ-FRLEQIRKEQEEEREAIRLSLEQALPPEPKEENAE
: : . : ..: : ..: ..: : . ... :. . . .::: . .:
XP_011 --RKSPHKDLGHRKEENRRPLTEPPVRTDPGTATNHQGLPAVDSEILE-MPPEKADGVVE
320 330 340 350 360 370
580 590 600 610 620
pF1KB9 ------PVSKLRIRTPSGEFLERRFLASNKLQIVFDFVASKGFPWDEYKLLSTFPRRDVT
: ..: .: :.:. . . . :: . : :::.: ....::..:::: ..
XP_011 GIDVNGPKAQLMLRYPDGKREQITLPEQAKLLALVKHVQSKGYPNERFELLTNFPRRKLS
380 390 400 410 420 430
630 640 650
pF1KB9 QLDPNKSLLEVKLFPQETLFLEAKE
.:: . .: :. : ::::.:.. .
XP_011 HLDYDITLQEAGLCPQETVFVQERN
440 450
650 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 18:24:28 2016 done: Thu Nov 3 18:24:30 2016
Total Scan time: 12.190 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]