Result of FASTA (ccds) for
pF1KB9405
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9405, 504 aa
1>>>pF1KB9405 504 - 504 aa - 504 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.5789+/-0.000995; mu= -1.7000+/- 0.060
mean_var=381.9206+/-77.229, 0's: 0 Z-trim(116.9): 34 B-trim: 462 in 1/54
Lambda= 0.065628
statistics sampled from 17582 (17612) to 17582 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.805), E-opt: 0.2 (0.541), width: 16
Scan time: 2.430
The best scores are: opt bits E(32554)
CCDS44716.1 YAP1 gene_id:10413|Hs108|chr11 ( 504) 3431 338.5 1.1e-92
CCDS73373.1 YAP1 gene_id:10413|Hs108|chr11 ( 508) 3413 336.8 3.5e-92
CCDS53699.1 YAP1 gene_id:10413|Hs108|chr11 ( 488) 2302 231.5 1.6e-60
CCDS60944.1 YAP1 gene_id:10413|Hs108|chr11 ( 492) 2295 230.9 2.5e-60
CCDS53700.1 YAP1 gene_id:10413|Hs108|chr11 ( 326) 2179 219.7 3.9e-57
CCDS73374.1 YAP1 gene_id:10413|Hs108|chr11 ( 470) 1612 166.2 7.2e-41
CCDS8314.2 YAP1 gene_id:10413|Hs108|chr11 ( 450) 1593 164.4 2.4e-40
CCDS60945.1 YAP1 gene_id:10413|Hs108|chr11 ( 454) 1593 164.4 2.4e-40
>>CCDS44716.1 YAP1 gene_id:10413|Hs108|chr11 (504 aa)
initn: 3431 init1: 3431 opt: 3431 Z-score: 1777.6 bits: 338.5 E(32554): 1.1e-92
Smith-Waterman score: 3431; 100.0% identity (100.0% similar) in 504 aa overlap (1-504:1-504)
10 20 30 40 50 60
pF1KB9 MDPGQQPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MDPGQQPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 SETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQSSFEIPDDVPLPAGWEMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQSSFEIPDDVPLPAGWEMA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNSASGPLPDGWEQAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNSASGPLPDGWEQAM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 TQDGEIYYINHKNKTTSWLDPRLDPRFAMNQRISQSAPVKQPPPLAPQSPQGGVMGGSNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 TQDGEIYYINHKNKTTSWLDPRLDPRFAMNQRISQSAPVKQPPPLAPQSPQGGVMGGSNS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 NQQQQMRLQQLQMEKERLRLKQQELLRQAMRNINPSTANSPKCQELALRSQLPTLEQDGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 NQQQQMRLQQLQMEKERLRLKQQELLRQAMRNINPSTANSPKCQELALRSQLPTLEQDGG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 TQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDFLNSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 TQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDFLNSV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 DEMDTGDTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQEALSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 DEMDTGDTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQEALSS
430 440 450 460 470 480
490 500
pF1KB9 DILNDMESVLAATKLDKESFLTWL
::::::::::::::::::::::::
CCDS44 DILNDMESVLAATKLDKESFLTWL
490 500
>>CCDS73373.1 YAP1 gene_id:10413|Hs108|chr11 (508 aa)
initn: 2283 init1: 2283 opt: 3413 Z-score: 1768.4 bits: 336.8 E(32554): 3.5e-92
Smith-Waterman score: 3413; 99.2% identity (99.2% similar) in 508 aa overlap (1-504:1-508)
10 20 30 40 50 60
pF1KB9 MDPGQQPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MDPGQQPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 SETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 SETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQSSFEIPDDVPLPAGWEMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQSSFEIPDDVPLPAGWEMA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNSASGPLPDGWEQAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 KTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNSASGPLPDGWEQAM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 TQDGEIYYINHKNKTTSWLDPRLDPRFAMNQRISQSAPVKQPPPLAPQSPQGGVMGGSNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 TQDGEIYYINHKNKTTSWLDPRLDPRFAMNQRISQSAPVKQPPPLAPQSPQGGVMGGSNS
250 260 270 280 290 300
310 320 330 340 350
pF1KB9 NQQQQMRLQQLQMEKERLRLKQQELLRQ----AMRNINPSTANSPKCQELALRSQLPTLE
:::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
CCDS73 NQQQQMRLQQLQMEKERLRLKQQELLRQVRPQAMRNINPSTANSPKCQELALRSQLPTLE
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB9 QDGGTQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 QDGGTQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDF
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB9 LNSVDEMDTGDTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LNSVDEMDTGDTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQE
430 440 450 460 470 480
480 490 500
pF1KB9 ALSSDILNDMESVLAATKLDKESFLTWL
::::::::::::::::::::::::::::
CCDS73 ALSSDILNDMESVLAATKLDKESFLTWL
490 500
>>CCDS53699.1 YAP1 gene_id:10413|Hs108|chr11 (488 aa)
initn: 2529 init1: 2285 opt: 2302 Z-score: 1200.1 bits: 231.5 E(32554): 1.6e-60
Smith-Waterman score: 3278; 96.8% identity (96.8% similar) in 504 aa overlap (1-504:1-488)
10 20 30 40 50 60
pF1KB9 MDPGQQPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MDPGQQPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 SETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 SETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQSSFEIPDDVPLPAGWEMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQSSFEIPDDVPLPAGWEMA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNSASGPLPDGWEQAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 KTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNSASGPLPDGWEQAM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 TQDGEIYYINHKNKTTSWLDPRLDPRFAMNQRISQSAPVKQPPPLAPQSPQGGVMGGSNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 TQDGEIYYINHKNKTTSWLDPRLDPRFAMNQRISQSAPVKQPPPLAPQSPQGGVMGGSNS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 NQQQQMRLQQLQMEKERLRLKQQELLRQAMRNINPSTANSPKCQELALRSQLPTLEQDGG
:::::::::::::::::::::::::::: ::::::::::::::::
CCDS53 NQQQQMRLQQLQMEKERLRLKQQELLRQ----------------ELALRSQLPTLEQDGG
310 320 330 340
370 380 390 400 410 420
pF1KB9 TQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDFLNSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 TQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDFLNSV
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB9 DEMDTGDTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQEALSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 DEMDTGDTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQEALSS
410 420 430 440 450 460
490 500
pF1KB9 DILNDMESVLAATKLDKESFLTWL
::::::::::::::::::::::::
CCDS53 DILNDMESVLAATKLDKESFLTWL
470 480
>>CCDS60944.1 YAP1 gene_id:10413|Hs108|chr11 (492 aa)
initn: 2283 init1: 2283 opt: 2295 Z-score: 1196.5 bits: 230.9 E(32554): 2.5e-60
Smith-Waterman score: 3296; 97.2% identity (97.4% similar) in 504 aa overlap (1-504:1-492)
10 20 30 40 50 60
pF1KB9 MDPGQQPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 MDPGQQPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 SETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 SETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQSSFEIPDDVPLPAGWEMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQSSFEIPDDVPLPAGWEMA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNSASGPLPDGWEQAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 KTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNSASGPLPDGWEQAM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 TQDGEIYYINHKNKTTSWLDPRLDPRFAMNQRISQSAPVKQPPPLAPQSPQGGVMGGSNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 TQDGEIYYINHKNKTTSWLDPRLDPRFAMNQRISQSAPVKQPPPLAPQSPQGGVMGGSNS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 NQQQQMRLQQLQMEKERLRLKQQELLRQAMRNINPSTANSPKCQELALRSQLPTLEQDGG
:::::::::::::::::::::::::::: . : :::::::::::::::::
CCDS60 NQQQQMRLQQLQMEKERLRLKQQELLRQ----VRP--------QELALRSQLPTLEQDGG
310 320 330 340
370 380 390 400 410 420
pF1KB9 TQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDFLNSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 TQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDFLNSV
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB9 DEMDTGDTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQEALSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 DEMDTGDTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQEALSS
410 420 430 440 450 460
490 500
pF1KB9 DILNDMESVLAATKLDKESFLTWL
::::::::::::::::::::::::
CCDS60 DILNDMESVLAATKLDKESFLTWL
470 480 490
>>CCDS53700.1 YAP1 gene_id:10413|Hs108|chr11 (326 aa)
initn: 2179 init1: 2179 opt: 2179 Z-score: 1139.3 bits: 219.7 E(32554): 3.9e-57
Smith-Waterman score: 2179; 100.0% identity (100.0% similar) in 326 aa overlap (179-504:1-326)
150 160 170 180 190 200
pF1KB9 SGPAATPTAQHLRQSSFEIPDDVPLPAGWEMAKTSSGQRYFLNHIDQTTTWQDPRKAMLS
::::::::::::::::::::::::::::::
CCDS53 MAKTSSGQRYFLNHIDQTTTWQDPRKAMLS
10 20 30
210 220 230 240 250 260
pF1KB9 QMNVTAPTSPPVQQNMMNSASGPLPDGWEQAMTQDGEIYYINHKNKTTSWLDPRLDPRFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 QMNVTAPTSPPVQQNMMNSASGPLPDGWEQAMTQDGEIYYINHKNKTTSWLDPRLDPRFA
40 50 60 70 80 90
270 280 290 300 310 320
pF1KB9 MNQRISQSAPVKQPPPLAPQSPQGGVMGGSNSNQQQQMRLQQLQMEKERLRLKQQELLRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MNQRISQSAPVKQPPPLAPQSPQGGVMGGSNSNQQQQMRLQQLQMEKERLRLKQQELLRQ
100 110 120 130 140 150
330 340 350 360 370 380
pF1KB9 AMRNINPSTANSPKCQELALRSQLPTLEQDGGTQNPVSSPGMSQELRTMTTNSSDPFLNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 AMRNINPSTANSPKCQELALRSQLPTLEQDGGTQNPVSSPGMSQELRTMTTNSSDPFLNS
160 170 180 190 200 210
390 400 410 420 430 440
pF1KB9 GTYHSRDESTDSGLSMSSYSVPRTPDDFLNSVDEMDTGDTINQSTLPSQQNRFPDYLEAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 GTYHSRDESTDSGLSMSSYSVPRTPDDFLNSVDEMDTGDTINQSTLPSQQNRFPDYLEAI
220 230 240 250 260 270
450 460 470 480 490 500
pF1KB9 PGTNVDLGTLEGDGMNIEGEELMPSLQEALSSDILNDMESVLAATKLDKESFLTWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 PGTNVDLGTLEGDGMNIEGEELMPSLQEALSSDILNDMESVLAATKLDKESFLTWL
280 290 300 310 320
>>CCDS73374.1 YAP1 gene_id:10413|Hs108|chr11 (470 aa)
initn: 2734 init1: 1593 opt: 1612 Z-score: 847.2 bits: 166.2 E(32554): 7.2e-41
Smith-Waterman score: 3044; 91.7% identity (91.7% similar) in 508 aa overlap (1-504:1-470)
10 20 30 40 50 60
pF1KB9 MDPGQQPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MDPGQQPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 SETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 SETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQSSFEIPDDVPLPAGWEMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQSSFEIPDDVPLPAGWEMA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNSASGPLPDGWEQAM
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 KTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNSAS-----------
190 200 210 220
250 260 270 280 290 300
pF1KB9 TQDGEIYYINHKNKTTSWLDPRLDPRFAMNQRISQSAPVKQPPPLAPQSPQGGVMGGSNS
:::::::::::::::::::::::::::::::::
CCDS73 ---------------------------AMNQRISQSAPVKQPPPLAPQSPQGGVMGGSNS
230 240 250 260
310 320 330 340 350
pF1KB9 NQQQQMRLQQLQMEKERLRLKQQELLRQ----AMRNINPSTANSPKCQELALRSQLPTLE
:::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
CCDS73 NQQQQMRLQQLQMEKERLRLKQQELLRQVRPQAMRNINPSTANSPKCQELALRSQLPTLE
270 280 290 300 310 320
360 370 380 390 400 410
pF1KB9 QDGGTQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 QDGGTQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDF
330 340 350 360 370 380
420 430 440 450 460 470
pF1KB9 LNSVDEMDTGDTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LNSVDEMDTGDTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQE
390 400 410 420 430 440
480 490 500
pF1KB9 ALSSDILNDMESVLAATKLDKESFLTWL
::::::::::::::::::::::::::::
CCDS73 ALSSDILNDMESVLAATKLDKESFLTWL
450 460 470
>>CCDS8314.2 YAP1 gene_id:10413|Hs108|chr11 (450 aa)
initn: 2623 init1: 1593 opt: 1593 Z-score: 837.7 bits: 164.4 E(32554): 2.4e-40
Smith-Waterman score: 2909; 89.3% identity (89.3% similar) in 504 aa overlap (1-504:1-450)
10 20 30 40 50 60
pF1KB9 MDPGQQPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 MDPGQQPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 SETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 SETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQSSFEIPDDVPLPAGWEMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQSSFEIPDDVPLPAGWEMA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNSASGPLPDGWEQAM
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 KTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNSAS-----------
190 200 210 220
250 260 270 280 290 300
pF1KB9 TQDGEIYYINHKNKTTSWLDPRLDPRFAMNQRISQSAPVKQPPPLAPQSPQGGVMGGSNS
:::::::::::::::::::::::::::::::::
CCDS83 ---------------------------AMNQRISQSAPVKQPPPLAPQSPQGGVMGGSNS
230 240 250 260
310 320 330 340 350 360
pF1KB9 NQQQQMRLQQLQMEKERLRLKQQELLRQAMRNINPSTANSPKCQELALRSQLPTLEQDGG
:::::::::::::::::::::::::::: ::::::::::::::::
CCDS83 NQQQQMRLQQLQMEKERLRLKQQELLRQ----------------ELALRSQLPTLEQDGG
270 280 290 300
370 380 390 400 410 420
pF1KB9 TQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDFLNSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 TQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDFLNSV
310 320 330 340 350 360
430 440 450 460 470 480
pF1KB9 DEMDTGDTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQEALSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 DEMDTGDTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQEALSS
370 380 390 400 410 420
490 500
pF1KB9 DILNDMESVLAATKLDKESFLTWL
::::::::::::::::::::::::
CCDS83 DILNDMESVLAATKLDKESFLTWL
430 440 450
>>CCDS60945.1 YAP1 gene_id:10413|Hs108|chr11 (454 aa)
initn: 2650 init1: 1593 opt: 1593 Z-score: 837.7 bits: 164.4 E(32554): 2.4e-40
Smith-Waterman score: 2927; 89.7% identity (89.9% similar) in 504 aa overlap (1-504:1-454)
10 20 30 40 50 60
pF1KB9 MDPGQQPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 MDPGQQPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 SETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 SETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQSSFEIPDDVPLPAGWEMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQSSFEIPDDVPLPAGWEMA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNSASGPLPDGWEQAM
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 KTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNSAS-----------
190 200 210 220
250 260 270 280 290 300
pF1KB9 TQDGEIYYINHKNKTTSWLDPRLDPRFAMNQRISQSAPVKQPPPLAPQSPQGGVMGGSNS
:::::::::::::::::::::::::::::::::
CCDS60 ---------------------------AMNQRISQSAPVKQPPPLAPQSPQGGVMGGSNS
230 240 250 260
310 320 330 340 350 360
pF1KB9 NQQQQMRLQQLQMEKERLRLKQQELLRQAMRNINPSTANSPKCQELALRSQLPTLEQDGG
:::::::::::::::::::::::::::: . : :::::::::::::::::
CCDS60 NQQQQMRLQQLQMEKERLRLKQQELLRQ----VRP--------QELALRSQLPTLEQDGG
270 280 290 300 310
370 380 390 400 410 420
pF1KB9 TQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDFLNSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 TQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDFLNSV
320 330 340 350 360 370
430 440 450 460 470 480
pF1KB9 DEMDTGDTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQEALSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 DEMDTGDTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQEALSS
380 390 400 410 420 430
490 500
pF1KB9 DILNDMESVLAATKLDKESFLTWL
::::::::::::::::::::::::
CCDS60 DILNDMESVLAATKLDKESFLTWL
440 450
504 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 01:42:14 2016 done: Sat Nov 5 01:42:15 2016
Total Scan time: 2.430 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]