Result of FASTA (omim) for
pF1KB9405
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9405, 504 aa
1>>>pF1KB9405 504 - 504 aa - 504 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 12.1452+/-0.00041; mu= -11.2652+/- 0.026
mean_var=439.3079+/-89.711, 0's: 0 Z-trim(124.9): 74 B-trim: 1614 in 1/58
Lambda= 0.061191
statistics sampled from 47556 (47637) to 47556 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.814), E-opt: 0.2 (0.559), width: 16
Scan time: 10.130
The best scores are: opt bits E(85289)
NP_001123617 (OMIM: 120433,606608) transcriptional ( 504) 3431 316.8 9.1e-86
XP_005271437 (OMIM: 120433,606608) PREDICTED: tran ( 506) 3417 315.6 2.1e-85
NP_001269030 (OMIM: 120433,606608) transcriptional ( 508) 3413 315.3 2.7e-85
XP_005271435 (OMIM: 120433,606608) PREDICTED: tran ( 510) 3399 314.0 6.5e-85
NP_001181973 (OMIM: 120433,606608) transcriptional ( 488) 2302 217.2 8.9e-56
NP_001269029 (OMIM: 120433,606608) transcriptional ( 492) 2295 216.5 1.4e-55
XP_005271440 (OMIM: 120433,606608) PREDICTED: tran ( 490) 2289 216.0 2e-55
XP_005271438 (OMIM: 120433,606608) PREDICTED: tran ( 494) 2281 215.3 3.3e-55
NP_001181974 (OMIM: 120433,606608) transcriptional ( 326) 2179 206.2 1.2e-52
XP_011540858 (OMIM: 120433,606608) PREDICTED: tran ( 330) 2161 204.6 3.7e-52
XP_011540857 (OMIM: 120433,606608) PREDICTED: tran ( 332) 2147 203.3 8.8e-52
NP_001269028 (OMIM: 120433,606608) transcriptional ( 470) 1612 156.2 1.9e-37
NP_001269026 (OMIM: 120433,606608) transcriptional ( 466) 1604 155.5 3.1e-37
NP_006097 (OMIM: 120433,606608) transcriptional co ( 450) 1593 154.5 5.8e-37
NP_001269027 (OMIM: 120433,606608) transcriptional ( 454) 1593 154.5 5.9e-37
XP_016872582 (OMIM: 120433,606608) PREDICTED: tran ( 310) 1057 107.1 7.8e-23
NP_056287 (OMIM: 607392) WW domain-containing tran ( 400) 440 52.7 2.3e-06
NP_001161752 (OMIM: 607392) WW domain-containing t ( 400) 440 52.7 2.3e-06
NP_001161750 (OMIM: 607392) WW domain-containing t ( 400) 440 52.7 2.3e-06
XP_016861611 (OMIM: 607392) PREDICTED: WW domain-c ( 400) 440 52.7 2.3e-06
XP_016861610 (OMIM: 607392) PREDICTED: WW domain-c ( 400) 440 52.7 2.3e-06
>>NP_001123617 (OMIM: 120433,606608) transcriptional coa (504 aa)
initn: 3431 init1: 3431 opt: 3431 Z-score: 1660.8 bits: 316.8 E(85289): 9.1e-86
Smith-Waterman score: 3431; 100.0% identity (100.0% similar) in 504 aa overlap (1-504:1-504)
10 20 30 40 50 60
pF1KB9 MDPGQQPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDPGQQPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 SETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQSSFEIPDDVPLPAGWEMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQSSFEIPDDVPLPAGWEMA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNSASGPLPDGWEQAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNSASGPLPDGWEQAM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 TQDGEIYYINHKNKTTSWLDPRLDPRFAMNQRISQSAPVKQPPPLAPQSPQGGVMGGSNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TQDGEIYYINHKNKTTSWLDPRLDPRFAMNQRISQSAPVKQPPPLAPQSPQGGVMGGSNS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 NQQQQMRLQQLQMEKERLRLKQQELLRQAMRNINPSTANSPKCQELALRSQLPTLEQDGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NQQQQMRLQQLQMEKERLRLKQQELLRQAMRNINPSTANSPKCQELALRSQLPTLEQDGG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 TQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDFLNSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDFLNSV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 DEMDTGDTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQEALSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DEMDTGDTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQEALSS
430 440 450 460 470 480
490 500
pF1KB9 DILNDMESVLAATKLDKESFLTWL
::::::::::::::::::::::::
NP_001 DILNDMESVLAATKLDKESFLTWL
490 500
>>XP_005271437 (OMIM: 120433,606608) PREDICTED: transcri (506 aa)
initn: 2146 init1: 1902 opt: 3417 Z-score: 1654.1 bits: 315.6 E(85289): 2.1e-85
Smith-Waterman score: 3417; 99.6% identity (99.6% similar) in 506 aa overlap (1-504:1-506)
10 20 30 40 50 60
pF1KB9 MDPGQQPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MDPGQQPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 SETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQSSFEIPDDVPLPAGWEMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQSSFEIPDDVPLPAGWEMA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNSASGPLPDGWEQAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNSASGPLPDGWEQAM
190 200 210 220 230 240
250 260 270 280 290
pF1KB9 TQDGEIYYINHKNKTTSWLDPRLDPRF--AMNQRISQSAPVKQPPPLAPQSPQGGVMGGS
::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::
XP_005 TQDGEIYYINHKNKTTSWLDPRLDPRFGKAMNQRISQSAPVKQPPPLAPQSPQGGVMGGS
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB9 NSNQQQQMRLQQLQMEKERLRLKQQELLRQAMRNINPSTANSPKCQELALRSQLPTLEQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NSNQQQQMRLQQLQMEKERLRLKQQELLRQAMRNINPSTANSPKCQELALRSQLPTLEQD
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB9 GGTQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDFLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GGTQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDFLN
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB9 SVDEMDTGDTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQEAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SVDEMDTGDTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQEAL
430 440 450 460 470 480
480 490 500
pF1KB9 SSDILNDMESVLAATKLDKESFLTWL
::::::::::::::::::::::::::
XP_005 SSDILNDMESVLAATKLDKESFLTWL
490 500
>>NP_001269030 (OMIM: 120433,606608) transcriptional coa (508 aa)
initn: 2283 init1: 2283 opt: 3413 Z-score: 1652.2 bits: 315.3 E(85289): 2.7e-85
Smith-Waterman score: 3413; 99.2% identity (99.2% similar) in 508 aa overlap (1-504:1-508)
10 20 30 40 50 60
pF1KB9 MDPGQQPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDPGQQPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 SETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQSSFEIPDDVPLPAGWEMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQSSFEIPDDVPLPAGWEMA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNSASGPLPDGWEQAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNSASGPLPDGWEQAM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 TQDGEIYYINHKNKTTSWLDPRLDPRFAMNQRISQSAPVKQPPPLAPQSPQGGVMGGSNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TQDGEIYYINHKNKTTSWLDPRLDPRFAMNQRISQSAPVKQPPPLAPQSPQGGVMGGSNS
250 260 270 280 290 300
310 320 330 340 350
pF1KB9 NQQQQMRLQQLQMEKERLRLKQQELLRQ----AMRNINPSTANSPKCQELALRSQLPTLE
:::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
NP_001 NQQQQMRLQQLQMEKERLRLKQQELLRQVRPQAMRNINPSTANSPKCQELALRSQLPTLE
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB9 QDGGTQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QDGGTQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDF
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB9 LNSVDEMDTGDTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LNSVDEMDTGDTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQE
430 440 450 460 470 480
480 490 500
pF1KB9 ALSSDILNDMESVLAATKLDKESFLTWL
::::::::::::::::::::::::::::
NP_001 ALSSDILNDMESVLAATKLDKESFLTWL
490 500
>>XP_005271435 (OMIM: 120433,606608) PREDICTED: transcri (510 aa)
initn: 3043 init1: 1902 opt: 3399 Z-score: 1645.5 bits: 314.0 E(85289): 6.5e-85
Smith-Waterman score: 3399; 98.8% identity (98.8% similar) in 510 aa overlap (1-504:1-510)
10 20 30 40 50 60
pF1KB9 MDPGQQPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MDPGQQPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 SETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQSSFEIPDDVPLPAGWEMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQSSFEIPDDVPLPAGWEMA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNSASGPLPDGWEQAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNSASGPLPDGWEQAM
190 200 210 220 230 240
250 260 270 280 290
pF1KB9 TQDGEIYYINHKNKTTSWLDPRLDPRF--AMNQRISQSAPVKQPPPLAPQSPQGGVMGGS
::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::
XP_005 TQDGEIYYINHKNKTTSWLDPRLDPRFGKAMNQRISQSAPVKQPPPLAPQSPQGGVMGGS
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB9 NSNQQQQMRLQQLQMEKERLRLKQQELLRQ----AMRNINPSTANSPKCQELALRSQLPT
:::::::::::::::::::::::::::::: ::::::::::::::::::::::::::
XP_005 NSNQQQQMRLQQLQMEKERLRLKQQELLRQVRPQAMRNINPSTANSPKCQELALRSQLPT
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB9 LEQDGGTQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LEQDGGTQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPD
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB9 DFLNSVDEMDTGDTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DFLNSVDEMDTGDTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSL
430 440 450 460 470 480
480 490 500
pF1KB9 QEALSSDILNDMESVLAATKLDKESFLTWL
::::::::::::::::::::::::::::::
XP_005 QEALSSDILNDMESVLAATKLDKESFLTWL
490 500 510
>>NP_001181973 (OMIM: 120433,606608) transcriptional coa (488 aa)
initn: 2529 init1: 2285 opt: 2302 Z-score: 1122.3 bits: 217.2 E(85289): 8.9e-56
Smith-Waterman score: 3278; 96.8% identity (96.8% similar) in 504 aa overlap (1-504:1-488)
10 20 30 40 50 60
pF1KB9 MDPGQQPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDPGQQPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 SETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQSSFEIPDDVPLPAGWEMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQSSFEIPDDVPLPAGWEMA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNSASGPLPDGWEQAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNSASGPLPDGWEQAM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 TQDGEIYYINHKNKTTSWLDPRLDPRFAMNQRISQSAPVKQPPPLAPQSPQGGVMGGSNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TQDGEIYYINHKNKTTSWLDPRLDPRFAMNQRISQSAPVKQPPPLAPQSPQGGVMGGSNS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 NQQQQMRLQQLQMEKERLRLKQQELLRQAMRNINPSTANSPKCQELALRSQLPTLEQDGG
:::::::::::::::::::::::::::: ::::::::::::::::
NP_001 NQQQQMRLQQLQMEKERLRLKQQELLRQ----------------ELALRSQLPTLEQDGG
310 320 330 340
370 380 390 400 410 420
pF1KB9 TQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDFLNSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDFLNSV
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB9 DEMDTGDTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQEALSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DEMDTGDTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQEALSS
410 420 430 440 450 460
490 500
pF1KB9 DILNDMESVLAATKLDKESFLTWL
::::::::::::::::::::::::
NP_001 DILNDMESVLAATKLDKESFLTWL
470 480
>>NP_001269029 (OMIM: 120433,606608) transcriptional coa (492 aa)
initn: 2283 init1: 2283 opt: 2295 Z-score: 1119.0 bits: 216.5 E(85289): 1.4e-55
Smith-Waterman score: 3296; 97.2% identity (97.4% similar) in 504 aa overlap (1-504:1-492)
10 20 30 40 50 60
pF1KB9 MDPGQQPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDPGQQPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 SETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQSSFEIPDDVPLPAGWEMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQSSFEIPDDVPLPAGWEMA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNSASGPLPDGWEQAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNSASGPLPDGWEQAM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 TQDGEIYYINHKNKTTSWLDPRLDPRFAMNQRISQSAPVKQPPPLAPQSPQGGVMGGSNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TQDGEIYYINHKNKTTSWLDPRLDPRFAMNQRISQSAPVKQPPPLAPQSPQGGVMGGSNS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 NQQQQMRLQQLQMEKERLRLKQQELLRQAMRNINPSTANSPKCQELALRSQLPTLEQDGG
:::::::::::::::::::::::::::: . : :::::::::::::::::
NP_001 NQQQQMRLQQLQMEKERLRLKQQELLRQ----VRP--------QELALRSQLPTLEQDGG
310 320 330 340
370 380 390 400 410 420
pF1KB9 TQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDFLNSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDFLNSV
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB9 DEMDTGDTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQEALSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DEMDTGDTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQEALSS
410 420 430 440 450 460
490 500
pF1KB9 DILNDMESVLAATKLDKESFLTWL
::::::::::::::::::::::::
NP_001 DILNDMESVLAATKLDKESFLTWL
470 480 490
>>XP_005271440 (OMIM: 120433,606608) PREDICTED: transcri (490 aa)
initn: 3176 init1: 1902 opt: 2289 Z-score: 1116.1 bits: 216.0 E(85289): 2e-55
Smith-Waterman score: 3264; 96.4% identity (96.4% similar) in 506 aa overlap (1-504:1-490)
10 20 30 40 50 60
pF1KB9 MDPGQQPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MDPGQQPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 SETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQSSFEIPDDVPLPAGWEMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQSSFEIPDDVPLPAGWEMA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNSASGPLPDGWEQAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNSASGPLPDGWEQAM
190 200 210 220 230 240
250 260 270 280 290
pF1KB9 TQDGEIYYINHKNKTTSWLDPRLDPRF--AMNQRISQSAPVKQPPPLAPQSPQGGVMGGS
::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::
XP_005 TQDGEIYYINHKNKTTSWLDPRLDPRFGKAMNQRISQSAPVKQPPPLAPQSPQGGVMGGS
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB9 NSNQQQQMRLQQLQMEKERLRLKQQELLRQAMRNINPSTANSPKCQELALRSQLPTLEQD
:::::::::::::::::::::::::::::: ::::::::::::::
XP_005 NSNQQQQMRLQQLQMEKERLRLKQQELLRQ----------------ELALRSQLPTLEQD
310 320 330 340
360 370 380 390 400 410
pF1KB9 GGTQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDFLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GGTQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDFLN
350 360 370 380 390 400
420 430 440 450 460 470
pF1KB9 SVDEMDTGDTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQEAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SVDEMDTGDTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQEAL
410 420 430 440 450 460
480 490 500
pF1KB9 SSDILNDMESVLAATKLDKESFLTWL
::::::::::::::::::::::::::
XP_005 SSDILNDMESVLAATKLDKESFLTWL
470 480 490
>>XP_005271438 (OMIM: 120433,606608) PREDICTED: transcri (494 aa)
initn: 2146 init1: 1902 opt: 2281 Z-score: 1112.3 bits: 215.3 E(85289): 3.3e-55
Smith-Waterman score: 3282; 96.8% identity (97.0% similar) in 506 aa overlap (1-504:1-494)
10 20 30 40 50 60
pF1KB9 MDPGQQPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MDPGQQPPPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 SETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQSSFEIPDDVPLPAGWEMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQSSFEIPDDVPLPAGWEMA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNSASGPLPDGWEQAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNSASGPLPDGWEQAM
190 200 210 220 230 240
250 260 270 280 290
pF1KB9 TQDGEIYYINHKNKTTSWLDPRLDPRF--AMNQRISQSAPVKQPPPLAPQSPQGGVMGGS
::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::
XP_005 TQDGEIYYINHKNKTTSWLDPRLDPRFGKAMNQRISQSAPVKQPPPLAPQSPQGGVMGGS
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB9 NSNQQQQMRLQQLQMEKERLRLKQQELLRQAMRNINPSTANSPKCQELALRSQLPTLEQD
:::::::::::::::::::::::::::::: . : :::::::::::::::
XP_005 NSNQQQQMRLQQLQMEKERLRLKQQELLRQ----VRP--------QELALRSQLPTLEQD
310 320 330 340
360 370 380 390 400 410
pF1KB9 GGTQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDFLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GGTQNPVSSPGMSQELRTMTTNSSDPFLNSGTYHSRDESTDSGLSMSSYSVPRTPDDFLN
350 360 370 380 390 400
420 430 440 450 460 470
pF1KB9 SVDEMDTGDTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQEAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SVDEMDTGDTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQEAL
410 420 430 440 450 460
480 490 500
pF1KB9 SSDILNDMESVLAATKLDKESFLTWL
::::::::::::::::::::::::::
XP_005 SSDILNDMESVLAATKLDKESFLTWL
470 480 490
>>NP_001181974 (OMIM: 120433,606608) transcriptional coa (326 aa)
initn: 2179 init1: 2179 opt: 2179 Z-score: 1066.0 bits: 206.2 E(85289): 1.2e-52
Smith-Waterman score: 2179; 100.0% identity (100.0% similar) in 326 aa overlap (179-504:1-326)
150 160 170 180 190 200
pF1KB9 SGPAATPTAQHLRQSSFEIPDDVPLPAGWEMAKTSSGQRYFLNHIDQTTTWQDPRKAMLS
::::::::::::::::::::::::::::::
NP_001 MAKTSSGQRYFLNHIDQTTTWQDPRKAMLS
10 20 30
210 220 230 240 250 260
pF1KB9 QMNVTAPTSPPVQQNMMNSASGPLPDGWEQAMTQDGEIYYINHKNKTTSWLDPRLDPRFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QMNVTAPTSPPVQQNMMNSASGPLPDGWEQAMTQDGEIYYINHKNKTTSWLDPRLDPRFA
40 50 60 70 80 90
270 280 290 300 310 320
pF1KB9 MNQRISQSAPVKQPPPLAPQSPQGGVMGGSNSNQQQQMRLQQLQMEKERLRLKQQELLRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNQRISQSAPVKQPPPLAPQSPQGGVMGGSNSNQQQQMRLQQLQMEKERLRLKQQELLRQ
100 110 120 130 140 150
330 340 350 360 370 380
pF1KB9 AMRNINPSTANSPKCQELALRSQLPTLEQDGGTQNPVSSPGMSQELRTMTTNSSDPFLNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AMRNINPSTANSPKCQELALRSQLPTLEQDGGTQNPVSSPGMSQELRTMTTNSSDPFLNS
160 170 180 190 200 210
390 400 410 420 430 440
pF1KB9 GTYHSRDESTDSGLSMSSYSVPRTPDDFLNSVDEMDTGDTINQSTLPSQQNRFPDYLEAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GTYHSRDESTDSGLSMSSYSVPRTPDDFLNSVDEMDTGDTINQSTLPSQQNRFPDYLEAI
220 230 240 250 260 270
450 460 470 480 490 500
pF1KB9 PGTNVDLGTLEGDGMNIEGEELMPSLQEALSSDILNDMESVLAATKLDKESFLTWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGTNVDLGTLEGDGMNIEGEELMPSLQEALSSDILNDMESVLAATKLDKESFLTWL
280 290 300 310 320
>>XP_011540858 (OMIM: 120433,606608) PREDICTED: transcri (330 aa)
initn: 1180 init1: 1180 opt: 2161 Z-score: 1057.3 bits: 204.6 E(85289): 3.7e-52
Smith-Waterman score: 2161; 98.8% identity (98.8% similar) in 330 aa overlap (179-504:1-330)
150 160 170 180 190 200
pF1KB9 SGPAATPTAQHLRQSSFEIPDDVPLPAGWEMAKTSSGQRYFLNHIDQTTTWQDPRKAMLS
::::::::::::::::::::::::::::::
XP_011 MAKTSSGQRYFLNHIDQTTTWQDPRKAMLS
10 20 30
210 220 230 240 250 260
pF1KB9 QMNVTAPTSPPVQQNMMNSASGPLPDGWEQAMTQDGEIYYINHKNKTTSWLDPRLDPRFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QMNVTAPTSPPVQQNMMNSASGPLPDGWEQAMTQDGEIYYINHKNKTTSWLDPRLDPRFA
40 50 60 70 80 90
270 280 290 300 310 320
pF1KB9 MNQRISQSAPVKQPPPLAPQSPQGGVMGGSNSNQQQQMRLQQLQMEKERLRLKQQELLRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MNQRISQSAPVKQPPPLAPQSPQGGVMGGSNSNQQQQMRLQQLQMEKERLRLKQQELLRQ
100 110 120 130 140 150
330 340 350 360 370 380
pF1KB9 ----AMRNINPSTANSPKCQELALRSQLPTLEQDGGTQNPVSSPGMSQELRTMTTNSSDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VRPQAMRNINPSTANSPKCQELALRSQLPTLEQDGGTQNPVSSPGMSQELRTMTTNSSDP
160 170 180 190 200 210
390 400 410 420 430 440
pF1KB9 FLNSGTYHSRDESTDSGLSMSSYSVPRTPDDFLNSVDEMDTGDTINQSTLPSQQNRFPDY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FLNSGTYHSRDESTDSGLSMSSYSVPRTPDDFLNSVDEMDTGDTINQSTLPSQQNRFPDY
220 230 240 250 260 270
450 460 470 480 490 500
pF1KB9 LEAIPGTNVDLGTLEGDGMNIEGEELMPSLQEALSSDILNDMESVLAATKLDKESFLTWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LEAIPGTNVDLGTLEGDGMNIEGEELMPSLQEALSSDILNDMESVLAATKLDKESFLTWL
280 290 300 310 320 330
504 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 01:42:15 2016 done: Sat Nov 5 01:42:17 2016
Total Scan time: 10.130 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]