Result of FASTA (omim) for
pF1KB9415
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9415, 690 aa
1>>>pF1KB9415 690 - 690 aa - 690 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.7306+/-0.000407; mu= 13.3257+/- 0.025
mean_var=108.0071+/-22.641, 0's: 0 Z-trim(114.3): 56 B-trim: 723 in 1/52
Lambda= 0.123409
statistics sampled from 24046 (24101) to 24046 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.648), E-opt: 0.2 (0.283), width: 16
Scan time: 11.430
The best scores are: opt bits E(85289)
NP_060014 (OMIM: 300440) NF-kappa-B-repressing fac ( 690) 4586 827.8 0
XP_011529667 (OMIM: 300440) PREDICTED: NF-kappa-B- ( 690) 4586 827.8 0
NP_001166959 (OMIM: 300440) NF-kappa-B-repressing ( 690) 4586 827.8 0
NP_001166958 (OMIM: 300440) NF-kappa-B-repressing ( 705) 4586 827.8 0
NP_060102 (OMIM: 615914) CDKN2A-interacting protei ( 580) 320 68.2 9.8e-11
XP_011507993 (OMIM: 616836) PREDICTED: G patch dom ( 490) 173 42.0 0.0064
XP_016857081 (OMIM: 616836) PREDICTED: G patch dom ( 491) 173 42.0 0.0064
XP_011507992 (OMIM: 616836) PREDICTED: G patch dom ( 514) 173 42.0 0.0067
NP_060510 (OMIM: 616836) G patch domain-containing ( 528) 173 42.0 0.0068
XP_011507991 (OMIM: 616836) PREDICTED: G patch dom ( 551) 173 42.1 0.0071
>>NP_060014 (OMIM: 300440) NF-kappa-B-repressing factor (690 aa)
initn: 4586 init1: 4586 opt: 4586 Z-score: 4417.4 bits: 827.8 E(85289): 0
Smith-Waterman score: 4586; 100.0% identity (100.0% similar) in 690 aa overlap (1-690:1-690)
10 20 30 40 50 60
pF1KB9 MEKILQMAEGIDIGEMPSYDLVLSKPSKGQKRHLSTCDGQNPPKKQAGSKFHARPRFEPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MEKILQMAEGIDIGEMPSYDLVLSKPSKGQKRHLSTCDGQNPPKKQAGSKFHARPRFEPV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 HFVASSSKDERQEDPYGPQTKEVNEQTHFASMPRDIYQDYTQDSFSIQDGNSQYCDSSGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 HFVASSSKDERQEDPYGPQTKEVNEQTHFASMPRDIYQDYTQDSFSIQDGNSQYCDSSGF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 ILTKDQPVTANMYFDSGNPAPSTTSQQANSQSTPEPSPSQTFPESVVAEKQYFIEKLTAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 ILTKDQPVTANMYFDSGNPAPSTTSQQANSQSTPEPSPSQTFPESVVAEKQYFIEKLTAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 IWKNLSNPEMTSGSDKINYTYMLTRCIQACKTNPEYIYAPLKEIPPADIPKNKKLLTDGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 IWKNLSNPEMTSGSDKINYTYMLTRCIQACKTNPEYIYAPLKEIPPADIPKNKKLLTDGY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 ACEVRCQNIYLTTGYAGSKNGSRDRATELAVKLLQKRIEVRVVRRKFKHTFGEDLVVCQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 ACEVRCQNIYLTTGYAGSKNGSRDRATELAVKLLQKRIEVRVVRRKFKHTFGEDLVVCQI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 GMSSYEFPPALKPPEDLVVLGKDASGQPIFNASAKHWTNFVITENANDAIGILNNSASFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 GMSSYEFPPALKPPEDLVVLGKDASGQPIFNASAKHWTNFVITENANDAIGILNNSASFN
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 KMSIEYKYEMMPNRTWRCRVFLQDHCLAEGYGTKKTSKHAAADEALKILQKTQPTYPSVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 KMSIEYKYEMMPNRTWRCRVFLQDHCLAEGYGTKKTSKHAAADEALKILQKTQPTYPSVK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 SSQCHTGSSPRGSGKKKDIKDLVVYENSSNPVCTLNDTAQFNRMTVEYVYERMTGLRWKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 SSQCHTGSSPRGSGKKKDIKDLVVYENSSNPVCTLNDTAQFNRMTVEYVYERMTGLRWKC
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 KVILESEVIAEAVGVKKTVKYEAAGEAVKTLKKTQPTVINNLKKGAVEDVISRNEIQGRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 KVILESEVIAEAVGVKKTVKYEAAGEAVKTLKKTQPTVINNLKKGAVEDVISRNEIQGRS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 AEEAYKQQIKEDNIGNQLLRKMGWTGGGLGKSGEGIREPISVKEQHKREGLGLDVERVNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 AEEAYKQQIKEDNIGNQLLRKMGWTGGGLGKSGEGIREPISVKEQHKREGLGLDVERVNK
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB9 IAKRDIEQIIRNYARSESHTDLTFSRELTNDERKQIHQIAQKYGLKSKSHGVGHDRYLVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 IAKRDIEQIIRNYARSESHTDLTFSRELTNDERKQIHQIAQKYGLKSKSHGVGHDRYLVV
610 620 630 640 650 660
670 680 690
pF1KB9 GRKRRKEDLLDQLKQEGQVGHYELVMPQAN
::::::::::::::::::::::::::::::
NP_060 GRKRRKEDLLDQLKQEGQVGHYELVMPQAN
670 680 690
>>XP_011529667 (OMIM: 300440) PREDICTED: NF-kappa-B-repr (690 aa)
initn: 4586 init1: 4586 opt: 4586 Z-score: 4417.4 bits: 827.8 E(85289): 0
Smith-Waterman score: 4586; 100.0% identity (100.0% similar) in 690 aa overlap (1-690:1-690)
10 20 30 40 50 60
pF1KB9 MEKILQMAEGIDIGEMPSYDLVLSKPSKGQKRHLSTCDGQNPPKKQAGSKFHARPRFEPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MEKILQMAEGIDIGEMPSYDLVLSKPSKGQKRHLSTCDGQNPPKKQAGSKFHARPRFEPV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 HFVASSSKDERQEDPYGPQTKEVNEQTHFASMPRDIYQDYTQDSFSIQDGNSQYCDSSGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HFVASSSKDERQEDPYGPQTKEVNEQTHFASMPRDIYQDYTQDSFSIQDGNSQYCDSSGF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 ILTKDQPVTANMYFDSGNPAPSTTSQQANSQSTPEPSPSQTFPESVVAEKQYFIEKLTAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ILTKDQPVTANMYFDSGNPAPSTTSQQANSQSTPEPSPSQTFPESVVAEKQYFIEKLTAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 IWKNLSNPEMTSGSDKINYTYMLTRCIQACKTNPEYIYAPLKEIPPADIPKNKKLLTDGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IWKNLSNPEMTSGSDKINYTYMLTRCIQACKTNPEYIYAPLKEIPPADIPKNKKLLTDGY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 ACEVRCQNIYLTTGYAGSKNGSRDRATELAVKLLQKRIEVRVVRRKFKHTFGEDLVVCQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ACEVRCQNIYLTTGYAGSKNGSRDRATELAVKLLQKRIEVRVVRRKFKHTFGEDLVVCQI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 GMSSYEFPPALKPPEDLVVLGKDASGQPIFNASAKHWTNFVITENANDAIGILNNSASFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GMSSYEFPPALKPPEDLVVLGKDASGQPIFNASAKHWTNFVITENANDAIGILNNSASFN
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 KMSIEYKYEMMPNRTWRCRVFLQDHCLAEGYGTKKTSKHAAADEALKILQKTQPTYPSVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KMSIEYKYEMMPNRTWRCRVFLQDHCLAEGYGTKKTSKHAAADEALKILQKTQPTYPSVK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 SSQCHTGSSPRGSGKKKDIKDLVVYENSSNPVCTLNDTAQFNRMTVEYVYERMTGLRWKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SSQCHTGSSPRGSGKKKDIKDLVVYENSSNPVCTLNDTAQFNRMTVEYVYERMTGLRWKC
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 KVILESEVIAEAVGVKKTVKYEAAGEAVKTLKKTQPTVINNLKKGAVEDVISRNEIQGRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KVILESEVIAEAVGVKKTVKYEAAGEAVKTLKKTQPTVINNLKKGAVEDVISRNEIQGRS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 AEEAYKQQIKEDNIGNQLLRKMGWTGGGLGKSGEGIREPISVKEQHKREGLGLDVERVNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AEEAYKQQIKEDNIGNQLLRKMGWTGGGLGKSGEGIREPISVKEQHKREGLGLDVERVNK
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB9 IAKRDIEQIIRNYARSESHTDLTFSRELTNDERKQIHQIAQKYGLKSKSHGVGHDRYLVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IAKRDIEQIIRNYARSESHTDLTFSRELTNDERKQIHQIAQKYGLKSKSHGVGHDRYLVV
610 620 630 640 650 660
670 680 690
pF1KB9 GRKRRKEDLLDQLKQEGQVGHYELVMPQAN
::::::::::::::::::::::::::::::
XP_011 GRKRRKEDLLDQLKQEGQVGHYELVMPQAN
670 680 690
>>NP_001166959 (OMIM: 300440) NF-kappa-B-repressing fact (690 aa)
initn: 4586 init1: 4586 opt: 4586 Z-score: 4417.4 bits: 827.8 E(85289): 0
Smith-Waterman score: 4586; 100.0% identity (100.0% similar) in 690 aa overlap (1-690:1-690)
10 20 30 40 50 60
pF1KB9 MEKILQMAEGIDIGEMPSYDLVLSKPSKGQKRHLSTCDGQNPPKKQAGSKFHARPRFEPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEKILQMAEGIDIGEMPSYDLVLSKPSKGQKRHLSTCDGQNPPKKQAGSKFHARPRFEPV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 HFVASSSKDERQEDPYGPQTKEVNEQTHFASMPRDIYQDYTQDSFSIQDGNSQYCDSSGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HFVASSSKDERQEDPYGPQTKEVNEQTHFASMPRDIYQDYTQDSFSIQDGNSQYCDSSGF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 ILTKDQPVTANMYFDSGNPAPSTTSQQANSQSTPEPSPSQTFPESVVAEKQYFIEKLTAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILTKDQPVTANMYFDSGNPAPSTTSQQANSQSTPEPSPSQTFPESVVAEKQYFIEKLTAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 IWKNLSNPEMTSGSDKINYTYMLTRCIQACKTNPEYIYAPLKEIPPADIPKNKKLLTDGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IWKNLSNPEMTSGSDKINYTYMLTRCIQACKTNPEYIYAPLKEIPPADIPKNKKLLTDGY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 ACEVRCQNIYLTTGYAGSKNGSRDRATELAVKLLQKRIEVRVVRRKFKHTFGEDLVVCQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ACEVRCQNIYLTTGYAGSKNGSRDRATELAVKLLQKRIEVRVVRRKFKHTFGEDLVVCQI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 GMSSYEFPPALKPPEDLVVLGKDASGQPIFNASAKHWTNFVITENANDAIGILNNSASFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GMSSYEFPPALKPPEDLVVLGKDASGQPIFNASAKHWTNFVITENANDAIGILNNSASFN
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 KMSIEYKYEMMPNRTWRCRVFLQDHCLAEGYGTKKTSKHAAADEALKILQKTQPTYPSVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KMSIEYKYEMMPNRTWRCRVFLQDHCLAEGYGTKKTSKHAAADEALKILQKTQPTYPSVK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 SSQCHTGSSPRGSGKKKDIKDLVVYENSSNPVCTLNDTAQFNRMTVEYVYERMTGLRWKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSQCHTGSSPRGSGKKKDIKDLVVYENSSNPVCTLNDTAQFNRMTVEYVYERMTGLRWKC
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 KVILESEVIAEAVGVKKTVKYEAAGEAVKTLKKTQPTVINNLKKGAVEDVISRNEIQGRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KVILESEVIAEAVGVKKTVKYEAAGEAVKTLKKTQPTVINNLKKGAVEDVISRNEIQGRS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 AEEAYKQQIKEDNIGNQLLRKMGWTGGGLGKSGEGIREPISVKEQHKREGLGLDVERVNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AEEAYKQQIKEDNIGNQLLRKMGWTGGGLGKSGEGIREPISVKEQHKREGLGLDVERVNK
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB9 IAKRDIEQIIRNYARSESHTDLTFSRELTNDERKQIHQIAQKYGLKSKSHGVGHDRYLVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IAKRDIEQIIRNYARSESHTDLTFSRELTNDERKQIHQIAQKYGLKSKSHGVGHDRYLVV
610 620 630 640 650 660
670 680 690
pF1KB9 GRKRRKEDLLDQLKQEGQVGHYELVMPQAN
::::::::::::::::::::::::::::::
NP_001 GRKRRKEDLLDQLKQEGQVGHYELVMPQAN
670 680 690
>>NP_001166958 (OMIM: 300440) NF-kappa-B-repressing fact (705 aa)
initn: 4586 init1: 4586 opt: 4586 Z-score: 4417.3 bits: 827.8 E(85289): 0
Smith-Waterman score: 4586; 100.0% identity (100.0% similar) in 690 aa overlap (1-690:16-705)
10 20 30 40
pF1KB9 MEKILQMAEGIDIGEMPSYDLVLSKPSKGQKRHLSTCDGQNPPKK
:::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGFMLPLIFRYSPRLMEKILQMAEGIDIGEMPSYDLVLSKPSKGQKRHLSTCDGQNPPKK
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB9 QAGSKFHARPRFEPVHFVASSSKDERQEDPYGPQTKEVNEQTHFASMPRDIYQDYTQDSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QAGSKFHARPRFEPVHFVASSSKDERQEDPYGPQTKEVNEQTHFASMPRDIYQDYTQDSF
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB9 SIQDGNSQYCDSSGFILTKDQPVTANMYFDSGNPAPSTTSQQANSQSTPEPSPSQTFPES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SIQDGNSQYCDSSGFILTKDQPVTANMYFDSGNPAPSTTSQQANSQSTPEPSPSQTFPES
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB9 VVAEKQYFIEKLTATIWKNLSNPEMTSGSDKINYTYMLTRCIQACKTNPEYIYAPLKEIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVAEKQYFIEKLTATIWKNLSNPEMTSGSDKINYTYMLTRCIQACKTNPEYIYAPLKEIP
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB9 PADIPKNKKLLTDGYACEVRCQNIYLTTGYAGSKNGSRDRATELAVKLLQKRIEVRVVRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PADIPKNKKLLTDGYACEVRCQNIYLTTGYAGSKNGSRDRATELAVKLLQKRIEVRVVRR
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB9 KFKHTFGEDLVVCQIGMSSYEFPPALKPPEDLVVLGKDASGQPIFNASAKHWTNFVITEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KFKHTFGEDLVVCQIGMSSYEFPPALKPPEDLVVLGKDASGQPIFNASAKHWTNFVITEN
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB9 ANDAIGILNNSASFNKMSIEYKYEMMPNRTWRCRVFLQDHCLAEGYGTKKTSKHAAADEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ANDAIGILNNSASFNKMSIEYKYEMMPNRTWRCRVFLQDHCLAEGYGTKKTSKHAAADEA
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB9 LKILQKTQPTYPSVKSSQCHTGSSPRGSGKKKDIKDLVVYENSSNPVCTLNDTAQFNRMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKILQKTQPTYPSVKSSQCHTGSSPRGSGKKKDIKDLVVYENSSNPVCTLNDTAQFNRMT
430 440 450 460 470 480
470 480 490 500 510 520
pF1KB9 VEYVYERMTGLRWKCKVILESEVIAEAVGVKKTVKYEAAGEAVKTLKKTQPTVINNLKKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VEYVYERMTGLRWKCKVILESEVIAEAVGVKKTVKYEAAGEAVKTLKKTQPTVINNLKKG
490 500 510 520 530 540
530 540 550 560 570 580
pF1KB9 AVEDVISRNEIQGRSAEEAYKQQIKEDNIGNQLLRKMGWTGGGLGKSGEGIREPISVKEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVEDVISRNEIQGRSAEEAYKQQIKEDNIGNQLLRKMGWTGGGLGKSGEGIREPISVKEQ
550 560 570 580 590 600
590 600 610 620 630 640
pF1KB9 HKREGLGLDVERVNKIAKRDIEQIIRNYARSESHTDLTFSRELTNDERKQIHQIAQKYGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HKREGLGLDVERVNKIAKRDIEQIIRNYARSESHTDLTFSRELTNDERKQIHQIAQKYGL
610 620 630 640 650 660
650 660 670 680 690
pF1KB9 KSKSHGVGHDRYLVVGRKRRKEDLLDQLKQEGQVGHYELVMPQAN
:::::::::::::::::::::::::::::::::::::::::::::
NP_001 KSKSHGVGHDRYLVVGRKRRKEDLLDQLKQEGQVGHYELVMPQAN
670 680 690 700
>>NP_060102 (OMIM: 615914) CDKN2A-interacting protein is (580 aa)
initn: 244 init1: 105 opt: 320 Z-score: 313.7 bits: 68.2 E(85289): 9.8e-11
Smith-Waterman score: 320; 31.6% identity (67.5% similar) in 209 aa overlap (117-318:379-580)
90 100 110 120 130 140
pF1KB9 THFASMPRDIYQDYTQDSFSIQDGNSQYCDSSGFILTKDQPVTANMYFDSGNPAPSTTSQ
.:: ...:. ... . : . . ..:::
NP_060 SSSSTNTSLLTSKSTSQVAASLLASKSSSQTSGSLVSKSTSLASVSQLASKSSSQTSTSQ
350 360 370 380 390 400
150 160 170 180 190 200
pF1KB9 QANSQSTPEPSPSQT-FPESV----VAEKQYFIEKLTATI-WKNLSNPEMTSGSDKINYT
:.:: . : :.. : .. : .:: :...: :. :: .. . . : ..:.
NP_060 LP-SKSTSQSSESSVKFSCKLTNEDVKQKQPFFNRLYKTVAWKLVA---VGGFSPNVNHG
410 420 430 440 450 460
210 220 230 240 250 260
pF1KB9 YMLTRCIQACKTNPEYIYAPLKEIPPADIPKNKKLLTDGYACEVRCQNIYLTTGYAGSKN
.:. :.: :.. . ...::::. ::.:.::. .. .::.::...:: :: . ::.
NP_060 ELLNAAIEALKATLDVFFVPLKEL--ADLPQNKSS-QESIVCELRCKSVYLGTGCGKSKE
470 480 490 500 510 520
270 280 290 300 310
pF1KB9 GSRDRATELAVKL-LQKRIEVRVVRRKFKHTFGEDLVVCQIGMSSYEFPPALKPPEDLVV
... :.. :.:: :.:.. :.. .::.. . ::::. . ..::::: :..:.
NP_060 NAKAVASREALKLFLKKKVVVKICKRKYRGSEIEDLVLLDEESRPVNLPPALKHPQELL
530 540 550 560 570 580
320 330 340 350 360 370
pF1KB9 LGKDASGQPIFNASAKHWTNFVITENANDAIGILNNSASFNKMSIEYKYEMMPNRTWRCR
>>XP_011507993 (OMIM: 616836) PREDICTED: G patch domain- (490 aa)
initn: 217 init1: 89 opt: 173 Z-score: 173.4 bits: 42.0 E(85289): 0.0064
Smith-Waterman score: 173; 50.0% identity (80.8% similar) in 52 aa overlap (547-597:425-476)
520 530 540 550 560 570
pF1KB9 TVINNLKKGAVEDVISRNEIQGRSAEEAYKQQIKEDNIGNQLLRKMGWT-GGGLGKSGEG
: : :.::::..:..:::: :.:::..:.:
XP_011 GTCSHILDETHVISLAIQIFHKAGFVGENAQPILENNIGNRMLQNMGWTPGSGLGRDGKG
400 410 420 430 440 450
580 590 600 610 620 630
pF1KB9 IREPISVKEQHKREGLGLDVERVNKIAKRDIEQIIRNYARSESHTDLTFSRELTNDERKQ
: :::.. .. : :::. . .
XP_011 ISEPIQAMQRPKGLGLGFPLPKSTSATTTPNAGKSA
460 470 480 490
>>XP_016857081 (OMIM: 616836) PREDICTED: G patch domain- (491 aa)
initn: 217 init1: 89 opt: 173 Z-score: 173.4 bits: 42.0 E(85289): 0.0064
Smith-Waterman score: 173; 50.0% identity (80.8% similar) in 52 aa overlap (547-597:426-477)
520 530 540 550 560 570
pF1KB9 TVINNLKKGAVEDVISRNEIQGRSAEEAYKQQIKEDNIGNQLLRKMGWT-GGGLGKSGEG
: : :.::::..:..:::: :.:::..:.:
XP_016 GSLCTGDIKRRRKAAPLPGPTTAGFVGENAQPILENNIGNRMLQNMGWTPGSGLGRDGKG
400 410 420 430 440 450
580 590 600 610 620 630
pF1KB9 IREPISVKEQHKREGLGLDVERVNKIAKRDIEQIIRNYARSESHTDLTFSRELTNDERKQ
: :::.. .. : :::. . .
XP_016 ISEPIQAMQRPKGLGLGFPLPKSTSATTTPNAGKSA
460 470 480 490
>>XP_011507992 (OMIM: 616836) PREDICTED: G patch domain- (514 aa)
initn: 217 init1: 89 opt: 173 Z-score: 173.1 bits: 42.0 E(85289): 0.0067
Smith-Waterman score: 173; 50.0% identity (80.8% similar) in 52 aa overlap (547-597:449-500)
520 530 540 550 560 570
pF1KB9 TVINNLKKGAVEDVISRNEIQGRSAEEAYKQQIKEDNIGNQLLRKMGWT-GGGLGKSGEG
: : :.::::..:..:::: :.:::..:.:
XP_011 GTCSHILDETHVISLAIQIFHKAGFVGENAQPILENNIGNRMLQNMGWTPGSGLGRDGKG
420 430 440 450 460 470
580 590 600 610 620 630
pF1KB9 IREPISVKEQHKREGLGLDVERVNKIAKRDIEQIIRNYARSESHTDLTFSRELTNDERKQ
: :::.. .. : :::. . .
XP_011 ISEPIQAMQRPKGLGLGFPLPKSTSATTTPNAGKSA
480 490 500 510
>>NP_060510 (OMIM: 616836) G patch domain-containing pro (528 aa)
initn: 217 init1: 89 opt: 173 Z-score: 172.9 bits: 42.0 E(85289): 0.0068
Smith-Waterman score: 173; 50.0% identity (80.8% similar) in 52 aa overlap (547-597:463-514)
520 530 540 550 560 570
pF1KB9 TVINNLKKGAVEDVISRNEIQGRSAEEAYKQQIKEDNIGNQLLRKMGWT-GGGLGKSGEG
: : :.::::..:..:::: :.:::..:.:
NP_060 GSLCTGDIKRRRKAAPLPGPTTAGFVGENAQPILENNIGNRMLQNMGWTPGSGLGRDGKG
440 450 460 470 480 490
580 590 600 610 620 630
pF1KB9 IREPISVKEQHKREGLGLDVERVNKIAKRDIEQIIRNYARSESHTDLTFSRELTNDERKQ
: :::.. .. : :::. . .
NP_060 ISEPIQAMQRPKGLGLGFPLPKSTSATTTPNAGKSA
500 510 520
>>XP_011507991 (OMIM: 616836) PREDICTED: G patch domain- (551 aa)
initn: 217 init1: 89 opt: 173 Z-score: 172.6 bits: 42.1 E(85289): 0.0071
Smith-Waterman score: 173; 50.0% identity (80.8% similar) in 52 aa overlap (547-597:486-537)
520 530 540 550 560 570
pF1KB9 TVINNLKKGAVEDVISRNEIQGRSAEEAYKQQIKEDNIGNQLLRKMGWT-GGGLGKSGEG
: : :.::::..:..:::: :.:::..:.:
XP_011 GTCSHILDETHVISLAIQIFHKAGFVGENAQPILENNIGNRMLQNMGWTPGSGLGRDGKG
460 470 480 490 500 510
580 590 600 610 620 630
pF1KB9 IREPISVKEQHKREGLGLDVERVNKIAKRDIEQIIRNYARSESHTDLTFSRELTNDERKQ
: :::.. .. : :::. . .
XP_011 ISEPIQAMQRPKGLGLGFPLPKSTSATTTPNAGKSA
520 530 540 550
690 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 01:46:33 2016 done: Sat Nov 5 01:46:34 2016
Total Scan time: 11.430 Total Display time: 0.100
Function used was FASTA [36.3.4 Apr, 2011]