Result of FASTA (ccds) for
pF1KB9453
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9453, 639 aa
1>>>pF1KB9453 639 - 639 aa - 639 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 15.0820+/-0.00121; mu= -21.1455+/- 0.073
mean_var=780.9872+/-161.564, 0's: 0 Z-trim(117.9): 143 B-trim: 62 in 1/54
Lambda= 0.045894
statistics sampled from 18659 (18795) to 18659 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.818), E-opt: 0.2 (0.577), width: 16
Scan time: 4.400
The best scores are: opt bits E(32554)
CCDS31599.1 SF1 gene_id:7536|Hs108|chr11 ( 639) 4651 323.2 7e-88
CCDS53660.1 SF1 gene_id:7536|Hs108|chr11 ( 613) 4472 311.3 2.5e-84
CCDS8080.1 SF1 gene_id:7536|Hs108|chr11 ( 638) 4315 300.9 3.5e-81
CCDS8081.1 SF1 gene_id:7536|Hs108|chr11 ( 548) 3791 266.1 8.7e-71
CCDS53661.1 SF1 gene_id:7536|Hs108|chr11 ( 673) 3729 262.1 1.7e-69
CCDS44642.2 SF1 gene_id:7536|Hs108|chr11 ( 571) 3150 223.7 5.3e-58
>>CCDS31599.1 SF1 gene_id:7536|Hs108|chr11 (639 aa)
initn: 4651 init1: 4651 opt: 4651 Z-score: 1691.3 bits: 323.2 E(32554): 7e-88
Smith-Waterman score: 4651; 100.0% identity (100.0% similar) in 639 aa overlap (1-639:1-639)
10 20 30 40 50 60
pF1KB9 MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIED
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 PDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 PDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 GSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 GSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 KMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 KMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 QSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 QSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 TTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 TTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 PPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 PPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 IPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 IPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPP
550 560 570 580 590 600
610 620 630
pF1KB9 PPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPPPQN
:::::::::::::::::::::::::::::::::::::::
CCDS31 PPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPPPQN
610 620 630
>>CCDS53660.1 SF1 gene_id:7536|Hs108|chr11 (613 aa)
initn: 4472 init1: 4472 opt: 4472 Z-score: 1627.4 bits: 311.3 E(32554): 2.5e-84
Smith-Waterman score: 4472; 100.0% identity (100.0% similar) in 613 aa overlap (27-639:1-613)
10 20 30 40 50 60
pF1KB9 MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIED
::::::::::::::::::::::::::::::::::
CCDS53 MEQKTVIPGMPTVIPPGLTREQERAYIVQLQIED
10 20 30
70 80 90 100 110 120
pF1KB9 LTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 LTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALN
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB9 PDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 PDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGK
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB9 GSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 GSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLR
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB9 KMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 KMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDP
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB9 QSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 QSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMS
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB9 TTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 TTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGP
340 350 360 370 380 390
430 440 450 460 470 480
pF1KB9 PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP
400 410 420 430 440 450
490 500 510 520 530 540
pF1KB9 PPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 PPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGS
460 470 480 490 500 510
550 560 570 580 590 600
pF1KB9 IPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 IPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPP
520 530 540 550 560 570
610 620 630
pF1KB9 PPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPPPQN
:::::::::::::::::::::::::::::::::::::::
CCDS53 PPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPPPQN
580 590 600 610
>>CCDS8080.1 SF1 gene_id:7536|Hs108|chr11 (638 aa)
initn: 4307 init1: 4307 opt: 4315 Z-score: 1571.0 bits: 300.9 E(32554): 3.5e-81
Smith-Waterman score: 4315; 97.9% identity (98.2% similar) in 612 aa overlap (1-612:1-612)
10 20 30 40 50 60
pF1KB9 MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIED
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 LTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 PDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 PDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 GSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 GSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 KMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 KMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 QSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 QSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 TTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 TTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 PPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 PPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 IPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::: :
CCDS80 IPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMIPPR
550 560 570 580 590 600
610 620 630
pF1KB9 PPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPPPQN
: . .:
CCDS80 GGDGPSHESEDFPRPLVTLPGRQPQQRPWWTGWFGKAA
610 620 630
>>CCDS8081.1 SF1 gene_id:7536|Hs108|chr11 (548 aa)
initn: 4807 init1: 3791 opt: 3791 Z-score: 1384.4 bits: 266.1 E(32554): 8.7e-71
Smith-Waterman score: 3791; 98.5% identity (99.3% similar) in 536 aa overlap (1-536:1-536)
10 20 30 40 50 60
pF1KB9 MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIED
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 LTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 PDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 PDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 GSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 GSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 KMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 KMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 QSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 QSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 TTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 TTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 PPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGS
::::::::::::::::::::::::::::::::::::::::::::::: . ... :
CCDS80 PPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQRSLPAAAMARAMR
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 IPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPP
CCDS80 VRTFRAHW
>>CCDS53661.1 SF1 gene_id:7536|Hs108|chr11 (673 aa)
initn: 4473 init1: 3729 opt: 3729 Z-score: 1361.1 bits: 262.1 E(32554): 1.7e-69
Smith-Waterman score: 3729; 98.5% identity (99.2% similar) in 526 aa overlap (11-536:136-661)
10 20 30 40
pF1KB9 MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVI
::::::::::::::::::::::::::::::
CCDS53 PLYQRVSPPQPPPPQPPRKDQQPGPAGGGGDFPSKKRKRSRWNQDTMEQKTVIPGMPTVI
110 120 130 140 150 160
50 60 70 80 90 100
pF1KB9 PPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 PPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFR
170 180 190 200 210 220
110 120 130 140 150 160
pF1KB9 TRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 TRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPR
230 240 250 260 270 280
170 180 190 200 210 220
pF1KB9 GNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 GNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVE
290 300 310 320 330 340
230 240 250 260 270 280
pF1KB9 QIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 QIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCT
350 360 370 380 390 400
290 300 310 320 330 340
pF1KB9 KCGGAGHIASDCKFQRPGDPQSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 KCGGAGHIASDCKFQRPGDPQSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPL
410 420 430 440 450 460
350 360 370 380 390 400
pF1KB9 ASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 ASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHP
470 480 490 500 510 520
410 420 430 440 450 460
pF1KB9 LPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 LPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGV
530 540 550 560 570 580
470 480 490 500 510 520
pF1KB9 YRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 YRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASS
590 600 610 620 630 640
530 540 550 560 570 580
pF1KB9 TPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPG
::::::: . ... :
CCDS53 TPLPWQQRSLPAAAMARAMRVRTFRAHW
650 660 670
>>CCDS44642.2 SF1 gene_id:7536|Hs108|chr11 (571 aa)
initn: 3150 init1: 3150 opt: 3150 Z-score: 1154.8 bits: 223.7 E(32554): 5.3e-58
Smith-Waterman score: 3169; 81.2% identity (84.1% similar) in 591 aa overlap (1-579:1-561)
10 20 30 40 50 60
pF1KB9 MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIED
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 PDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 PDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 GSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 KMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 QSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 QSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 TTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 TTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP
::::::::::::::::::::::::::: . :.: : : :.
CCDS44 PPPWMQPPPPPMNQGPHPPGHHGPPPMGK---SVP---GKY------------ACGLWGL
430 440 450 460
490 500 510 520 530 540
pF1KB9 PPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGS
: . : .: : : :. ::.:. .::.:....
CCDS44 SPASRKRYDAATTYGHDAAAAAASQWAAPTP----SLWSSSPM--------ATTAAAASA
470 480 490 500 510
550 560 570 580
pF1KB9 IPPWQQQ---QAAAAASPGAPQMQGN-PTM----VPLP----PGVQPPLPPGAPPPPPPP
: ::: : : . : :. :. : : :: :: :
CCDS44 TPSAQQQYGFQYPLAMAAKIPPRGGDGPSHESEDFPRPLVTLPGRQPQQRPWWTGWFGKA
520 530 540 550 560 570
590 600 610 620 630
pF1KB9 PPGSAGMMYAPPPPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPPPQN
CCDS44 A
639 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 02:17:35 2016 done: Sat Nov 5 02:17:36 2016
Total Scan time: 4.400 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]