Result of FASTA (ccds) for pF1KB9459
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9459, 1224 aa
  1>>>pF1KB9459 1224 - 1224 aa - 1224 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.7797+/-0.00144; mu= 9.6401+/- 0.084
 mean_var=145.4410+/-30.446, 0's: 0 Z-trim(103.1): 142  B-trim: 13 in 1/49
 Lambda= 0.106348
 statistics sampled from 7105 (7258) to 7105 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.572), E-opt: 0.2 (0.223), width:  16
 Scan time:  3.600

The best scores are:                                      opt bits E(32554)
CCDS1202.1 COPA gene_id:1314|Hs108|chr1            (1224) 8257 1280.4       0
CCDS41424.1 COPA gene_id:1314|Hs108|chr1           (1233) 4778 746.6 8.6e-215
CCDS3108.1 COPB2 gene_id:9276|Hs108|chr3           ( 906)  467 85.1 8.6e-16


>>CCDS1202.1 COPA gene_id:1314|Hs108|chr1                 (1224 aa)
 initn: 8257 init1: 8257 opt: 8257  Z-score: 6854.5  bits: 1280.4 E(32554):    0
Smith-Waterman score: 8257; 99.9% identity (99.9% similar) in 1224 aa overlap (1-1224:1-1224)

               10        20        30        40        50        60
pF1KB9 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 NWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 NWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB9 VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB9 RTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 RTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGV
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB9 FIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 FIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB9 LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB9 ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMM
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KB9 KIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 KIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDP
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KB9 EKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGTIASKGKGGALAADIDIDTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 EKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGTIASKGKGGALAADIDIDTV
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KB9 GTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQEEGGGWDVEEDLELPPELDISPGAAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: 
CCDS12 GTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQEEGGGWDVEEDLELPPELDISPGAAG
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KB9 GAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVIQFGPYKQLFL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 GAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVIQFGPYKQLFL
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KB9 QTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 QTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTVG
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KB9 KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSVETERKKLPKETLEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSVETERKKLPKETLEQ
             1030      1040      1050      1060      1070      1080

             1090      1100      1110      1120      1130      1140
pF1KB9 QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQ
             1090      1100      1110      1120      1130      1140

             1150      1160      1170      1180      1190      1200
pF1KB9 TRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 TRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQI
             1150      1160      1170      1180      1190      1200

             1210      1220    
pF1KB9 CRVTTVTEIGKDVIGLRISPLQFR
       ::::::::::::::::::::::::
CCDS12 CRVTTVTEIGKDVIGLRISPLQFR
             1210      1220    

>>CCDS41424.1 COPA gene_id:1314|Hs108|chr1                (1233 aa)
 initn: 8243 init1: 4767 opt: 4778  Z-score: 3969.7  bits: 746.6 E(32554): 8.6e-215
Smith-Waterman score: 8229; 99.2% identity (99.2% similar) in 1233 aa overlap (1-1224:1-1233)

               10        20        30        40        50        60
pF1KB9 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 NWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 NWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB9 VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
              430       440       450       460       470       480

              490       500                510       520       530 
pF1KB9 RTLASVKISKVKYVIWSADMSHVALLAKH---------AIVICNRKLDALCNIHENIRVK
       :::::::::::::::::::::::::::::         ::::::::::::::::::::::
CCDS41 RTLASVKISKVKYVIWSADMSHVALLAKHEHSCPLPLTAIVICNRKLDALCNIHENIRVK
              490       500       510       520       530       540

             540       550       560       570       580       590 
pF1KB9 SGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLT
              550       560       570       580       590       600

             600       610       620       630       640       650 
pF1KB9 IDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 IDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSL
              610       620       630       640       650       660

             660       670       680       690       700       710 
pF1KB9 ALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 ALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITG
              670       680       690       700       710       720

             720       730       740       750       760       770 
pF1KB9 NLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 NLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEA
              730       740       750       760       770       780

             780       790       800       810       820       830 
pF1KB9 ESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGTIASKGKGGAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 ESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGTIASKGKGGAL
              790       800       810       820       830       840

             840       850       860       870       880       890 
pF1KB9 AADIDIDTVGTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQEEGGGWDVEEDLELPPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 AADIDIDTVGTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQEEGGGWDVEEDLELPPE
              850       860       870       880       890       900

             900       910       920       930       940       950 
pF1KB9 LDISPGAADGAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVIQ
       :::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 LDISPGAAGGAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVIQ
              910       920       930       940       950       960

             960       970       980       990      1000      1010 
pF1KB9 FGPYKQLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 FGPYKQLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQ
              970       980       990      1000      1010      1020

            1020      1030      1040      1050      1060      1070 
pF1KB9 LCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSVETERK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 LCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSVETERK
             1030      1040      1050      1060      1070      1080

            1080      1090      1100      1110      1120      1130 
pF1KB9 KLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 KLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLEL
             1090      1100      1110      1120      1130      1140

            1140      1150      1160      1170      1180      1190 
pF1KB9 GPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGAC
             1150      1160      1170      1180      1190      1200

            1200      1210      1220    
pF1KB9 YSPEFKGQICRVTTVTEIGKDVIGLRISPLQFR
       :::::::::::::::::::::::::::::::::
CCDS41 YSPEFKGQICRVTTVTEIGKDVIGLRISPLQFR
             1210      1220      1230   

>>CCDS3108.1 COPB2 gene_id:9276|Hs108|chr3                (906 aa)
 initn: 758 init1: 340 opt: 467  Z-score: 397.0  bits: 85.1 E(32554): 8.6e-16
Smith-Waterman score: 970; 27.3% identity (57.0% similar) in 807 aa overlap (4-765:10-761)

                     10        20        30        40        50    
pF1KB9       MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPV
                :. ..: :::....:: .::.:.::.:: . .:...  ::.  :.  : ::
CCDS31 MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
               10        20        30        40        50        60

           60        70        80        90       100       110    
pF1KB9 RGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDD
       :.  :  ..   :.:.::..:.:.::.  . .  . .: ::::    :   :.::..:::
CCDS31 RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
               70        80        90       100       110       120

          120        130       140        150       160       170  
pF1KB9 QTIRVWNWQSR-TCVCVLTGHNHYVMCAQFHPTED-LVVSASLDQTVRVWDISGLRKKNL
       . :..:.:... .:  :. ::.::::   ..: ..   .:::::.:..::.. :  . :.
CCDS31 MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQL-GSSSPNF
              130       140       150       160       170          

            180       190       200       210         220       230
pF1KB9 SPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHP--TMPLIVSGADDRQVK
       .                           ::::..:::   ..     : ..:::::: ::
CCDS31 T---------------------------LEGHEKGVNCIDYYSGGDKPYLISGADDRLVK
     180                                  190       200       210  

              240       250       260       270       280       290
pF1KB9 IWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRD
       :: ....    :.: .:: .::::: :::.  .:...::: ..:.:  :     .:.   
CCDS31 IWDYQNKTC--VQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYG
            220         230       240       250       260       270

              300       310       320       330        340         
pF1KB9 HDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPAYAVHGN-MLHYVKDRFLRQLDFNSS
        .: : .:.  . :  : :.: : :. :: ::.::... .:  . ..:   ..: .... 
CCDS31 MERVWCVASLRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAM
              280       290       300       310       320       330

     350       360                   370       380       390       
pF1KB9 KDVAVMQLRSGSKFPVF------------NMSYNPAENAVLLCTRASNLENSTYDLYTIP
        :.   ....: ..:.             ....::    :..:       .. : .::  
CCDS31 GDA---EIKDGERLPLAVKDMGSCEIYPQTIQHNPNGRFVVVCG------DGEYIIYTAM
                 340       350       360       370             380 

       400       410       420        430       440       450      
pF1KB9 KDADSQNPDAPEGKRSSGLTAVWVA-RNRFAVLDRMHSLLIKNLKNEITKKVQVPNCD-E
          ...  .: :         .:.   ...:.  :  . ..: .::   ::   :.   :
CCDS31 ALRNKSFGSAQE--------FAWAHDSSEYAI--RESNSIVKIFKNFKEKKSFKPDFGAE
             390               400         410       420       430 

         460       470       480       490       500       510     
pF1KB9 IFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVIC-
        .:.:   : .:........: .. . .  ..: . :...:: .   : . ..... :  
CCDS31 SIYGGFL-LGVRSVNGLAFYDWDNTELIRRIEI-QPKHIFWSDSGELVCIATEESFFILK
              440       450       460        470       480         

            520                        530       540        550    
pF1KB9 --NRKLDALCNIHENIR-----------------VKSGAWDESGVFIYTTS-NHIKYAVT
         ..:. :  . ::..                  ::.: :  .  ::::.: :...: : 
CCDS31 YLSEKVLAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLW-VGDCFIYTSSVNRLNYYVG
     490       500       510       520        530       540        

          560       570         580       590       600            
pF1KB9 TGDHGIIRTLDLPIYVTRV--KGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKY---D
        :.   :  ::  .:.     : : .:  :.:      ..  . .... :.. : .   :
CCDS31 -GEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIISYSLLVSVLEYQTAVMRRDFSMAD
       550       560       570       580       590       600       

     610       620       630       640       650       660         
pF1KB9 EVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALD
       .::  .   :     .  .:.:.:. . ::    : . :: :::. :...:: . :   .
CCDS31 KVLPTI--PKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAE
       610         620       630       640       650       660     

     670       680       690       700       710       720         
pF1KB9 DKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDM
       ... :..:.:.:. . .  ... : ......  : .:   .:: . . :. . ::     
CCDS31 SEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNANMVNKLAEGAERDGKN
         670       680       690       700       710       720     

     730       740       750       760       770       780         
pF1KB9 SGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDPEKETIPDID
       .  ... .  : :.  ...:   :.   : . : :.                        
CCDS31 NVAFMSYFLQGKVDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKVNQKAA
         730       740       750       760       770       780     

     790       800       810       820       830       840         
pF1KB9 PNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGTIASKGKGGALAADIDIDTVGTEGWGEDA
                                                                   
CCDS31 ESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQYPLVTPNEERNVMEEGKDFQPS
         790       800       810       820       830       840     




1224 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 23:31:44 2016 done: Thu Nov  3 23:31:45 2016
 Total Scan time:  3.600 Total Display time:  0.150

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
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