Result of FASTA (omim) for pF1KB9512
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9512, 503 aa
  1>>>pF1KB9512 503 - 503 aa - 503 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.6920+/-0.000418; mu= 12.6776+/- 0.026
 mean_var=153.3689+/-31.043, 0's: 0 Z-trim(115.7): 193  B-trim: 33 in 1/58
 Lambda= 0.103563
 statistics sampled from 26072 (26308) to 26072 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.66), E-opt: 0.2 (0.308), width:  16
 Scan time:  8.840

The best scores are:                                      opt bits E(85289)
NP_542970 (OMIM: 602461) tyrosine-protein phosphat ( 504) 3247 497.5 3.7e-140
NP_001035112 (OMIM: 602461) tyrosine-protein phosp ( 504) 3247 497.5 3.7e-140
NP_001035111 (OMIM: 602461) tyrosine-protein phosp ( 504) 3247 497.5 3.7e-140
NP_001317657 (OMIM: 602461) tyrosine-protein phosp ( 508) 3229 494.8 2.4e-139
XP_005260727 (OMIM: 602461) PREDICTED: tyrosine-pr ( 508) 3229 494.8 2.4e-139
XP_011527475 (OMIM: 602461) PREDICTED: tyrosine-pr ( 508) 3039 466.4 8.5e-131
XP_011527436 (OMIM: 603889) PREDICTED: signal-regu ( 381) 2156 334.4 3.6e-91
NP_001129316 (OMIM: 603889) signal-regulatory prot ( 398) 2156 334.4 3.7e-91
NP_001316086 (OMIM: 603889) signal-regulatory prot ( 398) 2156 334.4 3.7e-91
XP_005260698 (OMIM: 603889) PREDICTED: signal-regu ( 397) 1974 307.2 5.7e-83
XP_016883066 (OMIM: 603889) PREDICTED: signal-regu ( 398) 1967 306.2 1.2e-82
NP_006056 (OMIM: 603889) signal-regulatory protein ( 398) 1967 306.2 1.2e-82
XP_016883073 (OMIM: 603889) PREDICTED: signal-regu ( 363) 1954 304.2 4.3e-82
XP_016883072 (OMIM: 603889) PREDICTED: signal-regu ( 363) 1954 304.2 4.3e-82
XP_016883068 (OMIM: 603889) PREDICTED: signal-regu ( 384) 1954 304.2 4.4e-82
XP_016883069 (OMIM: 603889) PREDICTED: signal-regu ( 384) 1954 304.2 4.4e-82
XP_016883067 (OMIM: 603889) PREDICTED: signal-regu ( 384) 1954 304.2 4.4e-82
NP_061026 (OMIM: 605466) signal-regulatory protein ( 387) 1784 278.8   2e-74
XP_011527588 (OMIM: 605466) PREDICTED: signal-regu ( 354) 1721 269.3 1.3e-71
XP_016883071 (OMIM: 603889) PREDICTED: signal-regu ( 364) 1496 235.7 1.7e-61
XP_016883070 (OMIM: 603889) PREDICTED: signal-regu ( 371) 1496 235.7 1.7e-61
XP_005260700 (OMIM: 603889) PREDICTED: signal-regu ( 286) 1356 214.7 2.8e-55
XP_016883074 (OMIM: 603889) PREDICTED: signal-regu ( 287) 1349 213.7 5.9e-55
XP_011527589 (OMIM: 605466) PREDICTED: signal-regu ( 262) 1243 197.8 3.2e-50
NP_001034597 (OMIM: 605466) signal-regulatory prot ( 276) 1243 197.8 3.3e-50
XP_006723608 (OMIM: 602461) PREDICTED: tyrosine-pr ( 291)  881 143.8 6.6e-34
XP_005260806 (OMIM: 605466) PREDICTED: signal-regu ( 281)  709 118.0 3.5e-26
NP_001317568 (OMIM: 603889) signal-regulatory prot ( 180)  705 117.2 3.9e-26
NP_001077379 (OMIM: 603889) signal-regulatory prot ( 181)  698 116.2 8.1e-26
NP_543006 (OMIM: 605466) signal-regulatory protein ( 170)  624 105.1 1.7e-22
NP_001120645 (OMIM: 609743) cell adhesion molecule ( 398)  325 60.8 8.4e-09
NP_067012 (OMIM: 609743) cell adhesion molecule 3  ( 432)  306 58.0 6.4e-08
XP_006713145 (OMIM: 609938) PREDICTED: cell adhesi ( 395)  221 45.3  0.0004
XP_016861552 (OMIM: 609938) PREDICTED: cell adhesi ( 397)  221 45.3  0.0004
NP_001161147 (OMIM: 609938) cell adhesion molecule ( 404)  221 45.3  0.0004
NP_001161146 (OMIM: 609938) cell adhesion molecule ( 435)  221 45.3 0.00042
XP_006713144 (OMIM: 609938) PREDICTED: cell adhesi ( 435)  221 45.3 0.00042
NP_694854 (OMIM: 609938) cell adhesion molecule 2  ( 437)  221 45.3 0.00043
XP_016861551 (OMIM: 609938) PREDICTED: cell adhesi ( 449)  221 45.3 0.00043
NP_001333439 (OMIM: 609743) cell adhesion molecule ( 352)  214 44.2 0.00076
NP_004637 (OMIM: 256300,602716) nephrin precursor  (1241)  215 44.9  0.0016
NP_872413 (OMIM: 300620) V-set and immunoglobulin  ( 387)  190 40.6  0.0097


>>NP_542970 (OMIM: 602461) tyrosine-protein phosphatase   (504 aa)
 initn: 2453 init1: 2453 opt: 3247  Z-score: 2637.2  bits: 497.5 E(85289): 3.7e-140
Smith-Waterman score: 3247; 97.4% identity (99.0% similar) in 504 aa overlap (1-503:1-504)

               10        20        30        40        50        60
pF1KB9 MEPAGPAPGRLGPLLCLLLAASCAWSGVAGEEELQVIQPDKSVSVAAGESAILHCTVTSL
       ::::::::::::::::::::::::::::::::::::::::::: :::::.: :.::.:::
NP_542 MEPAGPAPGRLGPLLCLLLAASCAWSGVAGEEELQVIQPDKSVLVAAGETATLRCTATSL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 IPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTYY
       ::::::::::::::.:::::::::::::::::::. :::.:::::: :.:::::::::::
NP_542 IPVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRIGNITPADAGTYY
               70        80        90       100       110       120

              130        140       150       160       170         
pF1KB9 CVKFRKGSPD-TEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDI
       :::::::::: .::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 CVKFRKGSPDDVEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDI
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KB9 TLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 TLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPL
              190       200       210       220       230       240

     240       250       260       270       280       290         
pF1KB9 RGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 RGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETAS
              250       260       270       280       290       300

     300       310       320       330       340       350         
pF1KB9 TVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 TVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNT
              310       320       330       340       350       360

     360       370       380       390       400       410         
pF1KB9 AAENTGSNERNIYIVVGVVCTLLVALLMAALYLVRIRQKKAQGSTSSTRLHEPEKNAREI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 AAENTGSNERNIYIVVGVVCTLLVALLMAALYLVRIRQKKAQGSTSSTRLHEPEKNAREI
              370       380       390       400       410       420

     420       430       440       450       460       470         
pF1KB9 TQDTNDITYADLNLPKGKKPAPQAAEPNNHTEYASIQTSPQPASEDTLTYADLDMVHLNR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 TQDTNDITYADLNLPKGKKPAPQAAEPNNHTEYASIQTSPQPASEDTLTYADLDMVHLNR
              430       440       450       460       470       480

     480       490       500   
pF1KB9 TPKQPAPKPEPSFSEYASVQVPRK
       ::::::::::::::::::::::::
NP_542 TPKQPAPKPEPSFSEYASVQVPRK
              490       500    

>>NP_001035112 (OMIM: 602461) tyrosine-protein phosphata  (504 aa)
 initn: 2453 init1: 2453 opt: 3247  Z-score: 2637.2  bits: 497.5 E(85289): 3.7e-140
Smith-Waterman score: 3247; 97.4% identity (99.0% similar) in 504 aa overlap (1-503:1-504)

               10        20        30        40        50        60
pF1KB9 MEPAGPAPGRLGPLLCLLLAASCAWSGVAGEEELQVIQPDKSVSVAAGESAILHCTVTSL
       ::::::::::::::::::::::::::::::::::::::::::: :::::.: :.::.:::
NP_001 MEPAGPAPGRLGPLLCLLLAASCAWSGVAGEEELQVIQPDKSVLVAAGETATLRCTATSL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 IPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTYY
       ::::::::::::::.:::::::::::::::::::. :::.:::::: :.:::::::::::
NP_001 IPVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRIGNITPADAGTYY
               70        80        90       100       110       120

              130        140       150       160       170         
pF1KB9 CVKFRKGSPD-TEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDI
       :::::::::: .::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CVKFRKGSPDDVEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDI
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KB9 TLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPL
              190       200       210       220       230       240

     240       250       260       270       280       290         
pF1KB9 RGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETAS
              250       260       270       280       290       300

     300       310       320       330       340       350         
pF1KB9 TVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNT
              310       320       330       340       350       360

     360       370       380       390       400       410         
pF1KB9 AAENTGSNERNIYIVVGVVCTLLVALLMAALYLVRIRQKKAQGSTSSTRLHEPEKNAREI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AAENTGSNERNIYIVVGVVCTLLVALLMAALYLVRIRQKKAQGSTSSTRLHEPEKNAREI
              370       380       390       400       410       420

     420       430       440       450       460       470         
pF1KB9 TQDTNDITYADLNLPKGKKPAPQAAEPNNHTEYASIQTSPQPASEDTLTYADLDMVHLNR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TQDTNDITYADLNLPKGKKPAPQAAEPNNHTEYASIQTSPQPASEDTLTYADLDMVHLNR
              430       440       450       460       470       480

     480       490       500   
pF1KB9 TPKQPAPKPEPSFSEYASVQVPRK
       ::::::::::::::::::::::::
NP_001 TPKQPAPKPEPSFSEYASVQVPRK
              490       500    

>>NP_001035111 (OMIM: 602461) tyrosine-protein phosphata  (504 aa)
 initn: 2453 init1: 2453 opt: 3247  Z-score: 2637.2  bits: 497.5 E(85289): 3.7e-140
Smith-Waterman score: 3247; 97.4% identity (99.0% similar) in 504 aa overlap (1-503:1-504)

               10        20        30        40        50        60
pF1KB9 MEPAGPAPGRLGPLLCLLLAASCAWSGVAGEEELQVIQPDKSVSVAAGESAILHCTVTSL
       ::::::::::::::::::::::::::::::::::::::::::: :::::.: :.::.:::
NP_001 MEPAGPAPGRLGPLLCLLLAASCAWSGVAGEEELQVIQPDKSVLVAAGETATLRCTATSL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 IPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTYY
       ::::::::::::::.:::::::::::::::::::. :::.:::::: :.:::::::::::
NP_001 IPVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRIGNITPADAGTYY
               70        80        90       100       110       120

              130        140       150       160       170         
pF1KB9 CVKFRKGSPD-TEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDI
       :::::::::: .::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CVKFRKGSPDDVEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDI
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KB9 TLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPL
              190       200       210       220       230       240

     240       250       260       270       280       290         
pF1KB9 RGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETAS
              250       260       270       280       290       300

     300       310       320       330       340       350         
pF1KB9 TVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNT
              310       320       330       340       350       360

     360       370       380       390       400       410         
pF1KB9 AAENTGSNERNIYIVVGVVCTLLVALLMAALYLVRIRQKKAQGSTSSTRLHEPEKNAREI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AAENTGSNERNIYIVVGVVCTLLVALLMAALYLVRIRQKKAQGSTSSTRLHEPEKNAREI
              370       380       390       400       410       420

     420       430       440       450       460       470         
pF1KB9 TQDTNDITYADLNLPKGKKPAPQAAEPNNHTEYASIQTSPQPASEDTLTYADLDMVHLNR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TQDTNDITYADLNLPKGKKPAPQAAEPNNHTEYASIQTSPQPASEDTLTYADLDMVHLNR
              430       440       450       460       470       480

     480       490       500   
pF1KB9 TPKQPAPKPEPSFSEYASVQVPRK
       ::::::::::::::::::::::::
NP_001 TPKQPAPKPEPSFSEYASVQVPRK
              490       500    

>>NP_001317657 (OMIM: 602461) tyrosine-protein phosphata  (508 aa)
 initn: 2439 init1: 1900 opt: 3229  Z-score: 2622.6  bits: 494.8 E(85289): 2.4e-139
Smith-Waterman score: 3229; 96.7% identity (98.2% similar) in 508 aa overlap (1-503:1-508)

               10        20        30        40        50        60
pF1KB9 MEPAGPAPGRLGPLLCLLLAASCAWSGVAGEEELQVIQPDKSVSVAAGESAILHCTVTSL
       ::::::::::::::::::::::::::::::::::::::::::: :::::.: :.::.:::
NP_001 MEPAGPAPGRLGPLLCLLLAASCAWSGVAGEEELQVIQPDKSVLVAAGETATLRCTATSL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 IPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTYY
       ::::::::::::::.:::::::::::::::::::. :::.:::::: :.:::::::::::
NP_001 IPVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRIGNITPADAGTYY
               70        80        90       100       110       120

              130        140       150       160       170         
pF1KB9 CVKFRKGSPD-TEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDI
       :::::::::: .::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CVKFRKGSPDDVEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDI
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KB9 TLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPL
              190       200       210       220       230       240

     240       250       260       270       280       290         
pF1KB9 RGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETAS
              250       260       270       280       290       300

     300       310       320       330       340       350         
pF1KB9 TVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNT
              310       320       330       340       350       360

     360       370       380       390       400       410         
pF1KB9 AAENTGSNERNIYIVVGVVCTLLVALLMAALYLVRIRQKKAQGSTSSTRLHEPEKNAREI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AAENTGSNERNIYIVVGVVCTLLVALLMAALYLVRIRQKKAQGSTSSTRLHEPEKNAREI
              370       380       390       400       410       420

     420           430       440       450       460       470     
pF1KB9 TQ----DTNDITYADLNLPKGKKPAPQAAEPNNHTEYASIQTSPQPASEDTLTYADLDMV
       ::    ::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TQVQSLDTNDITYADLNLPKGKKPAPQAAEPNNHTEYASIQTSPQPASEDTLTYADLDMV
              430       440       450       460       470       480

         480       490       500   
pF1KB9 HLNRTPKQPAPKPEPSFSEYASVQVPRK
       ::::::::::::::::::::::::::::
NP_001 HLNRTPKQPAPKPEPSFSEYASVQVPRK
              490       500        

>>XP_005260727 (OMIM: 602461) PREDICTED: tyrosine-protei  (508 aa)
 initn: 2439 init1: 1900 opt: 3229  Z-score: 2622.6  bits: 494.8 E(85289): 2.4e-139
Smith-Waterman score: 3229; 96.7% identity (98.2% similar) in 508 aa overlap (1-503:1-508)

               10        20        30        40        50        60
pF1KB9 MEPAGPAPGRLGPLLCLLLAASCAWSGVAGEEELQVIQPDKSVSVAAGESAILHCTVTSL
       ::::::::::::::::::::::::::::::::::::::::::: :::::.: :.::.:::
XP_005 MEPAGPAPGRLGPLLCLLLAASCAWSGVAGEEELQVIQPDKSVLVAAGETATLRCTATSL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 IPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTYY
       ::::::::::::::.:::::::::::::::::::. :::.:::::: :.:::::::::::
XP_005 IPVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRIGNITPADAGTYY
               70        80        90       100       110       120

              130        140       150       160       170         
pF1KB9 CVKFRKGSPD-TEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDI
       :::::::::: .::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CVKFRKGSPDDVEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDI
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KB9 TLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPL
              190       200       210       220       230       240

     240       250       260       270       280       290         
pF1KB9 RGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETAS
              250       260       270       280       290       300

     300       310       320       330       340       350         
pF1KB9 TVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNT
              310       320       330       340       350       360

     360       370       380       390       400       410         
pF1KB9 AAENTGSNERNIYIVVGVVCTLLVALLMAALYLVRIRQKKAQGSTSSTRLHEPEKNAREI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AAENTGSNERNIYIVVGVVCTLLVALLMAALYLVRIRQKKAQGSTSSTRLHEPEKNAREI
              370       380       390       400       410       420

     420           430       440       450       460       470     
pF1KB9 TQ----DTNDITYADLNLPKGKKPAPQAAEPNNHTEYASIQTSPQPASEDTLTYADLDMV
       ::    ::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TQVQSLDTNDITYADLNLPKGKKPAPQAAEPNNHTEYASIQTSPQPASEDTLTYADLDMV
              430       440       450       460       470       480

         480       490       500   
pF1KB9 HLNRTPKQPAPKPEPSFSEYASVQVPRK
       ::::::::::::::::::::::::::::
XP_005 HLNRTPKQPAPKPEPSFSEYASVQVPRK
              490       500        

>>XP_011527475 (OMIM: 602461) PREDICTED: tyrosine-protei  (508 aa)
 initn: 2439 init1: 1900 opt: 3039  Z-score: 2469.2  bits: 466.4 E(85289): 8.5e-131
Smith-Waterman score: 3039; 96.5% identity (98.1% similar) in 482 aa overlap (27-503:27-508)

               10        20        30        40        50        60
pF1KB9 MEPAGPAPGRLGPLLCLLLAASCAWSGVAGEEELQVIQPDKSVSVAAGESAILHCTVTSL
                                 ::::::::::::::::: :::::.: :.::.:::
XP_011 MTLKTRCCIWTLSPALAYFILPEIHRGVAGEEELQVIQPDKSVLVAAGETATLRCTATSL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 IPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTYY
       ::::::::::::::.:::::::::::::::::::. :::.:::::: :.:::::::::::
XP_011 IPVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRIGNITPADAGTYY
               70        80        90       100       110       120

              130        140       150       160       170         
pF1KB9 CVKFRKGSPD-TEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDI
       :::::::::: .::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CVKFRKGSPDDVEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDI
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KB9 TLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPL
              190       200       210       220       230       240

     240       250       260       270       280       290         
pF1KB9 RGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETAS
              250       260       270       280       290       300

     300       310       320       330       340       350         
pF1KB9 TVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNT
              310       320       330       340       350       360

     360       370       380       390       400       410         
pF1KB9 AAENTGSNERNIYIVVGVVCTLLVALLMAALYLVRIRQKKAQGSTSSTRLHEPEKNAREI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AAENTGSNERNIYIVVGVVCTLLVALLMAALYLVRIRQKKAQGSTSSTRLHEPEKNAREI
              370       380       390       400       410       420

     420           430       440       450       460       470     
pF1KB9 TQ----DTNDITYADLNLPKGKKPAPQAAEPNNHTEYASIQTSPQPASEDTLTYADLDMV
       ::    ::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TQVQSLDTNDITYADLNLPKGKKPAPQAAEPNNHTEYASIQTSPQPASEDTLTYADLDMV
              430       440       450       460       470       480

         480       490       500   
pF1KB9 HLNRTPKQPAPKPEPSFSEYASVQVPRK
       ::::::::::::::::::::::::::::
XP_011 HLNRTPKQPAPKPEPSFSEYASVQVPRK
              490       500        

>>XP_011527436 (OMIM: 603889) PREDICTED: signal-regulato  (381 aa)
 initn: 2242 init1: 1508 opt: 2156  Z-score: 1757.7  bits: 334.4 E(85289): 3.6e-91
Smith-Waterman score: 2156; 91.4% identity (95.0% similar) in 361 aa overlap (3-362:8-362)

                    10        20        30        40        50     
pF1KB9      MEPAGPAPGRLGPLLCLLLAASCAWSGVAGEEELQVIQPDKSVSVAAGESAILHC
              :  :.:     :. :::.     .::::::::::::::::.:::::::: :::
XP_011 MPVPASWPHLPSPFL---LMTLLLGR---LTGVAGEEELQVIQPDKSISVAAGESATLHC
               10           20           30        40        50    

          60        70        80        90       100       110     
pF1KB9 TVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPAD
       :::::::::::::::::::.:::::::::::::::::::. :::.:::::: ::::::::
XP_011 TVTSLIPVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISNITPAD
           60        70        80        90       100       110    

         120       130        140       150       160       170    
pF1KB9 AGTYYCVKFRKGSPD-TEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGF
       ::::::::::::::: .:::::::::::::::::::::::::::::::::::::::::::
XP_011 AGTYYCVKFRKGSPDHVEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGF
          120       130       140       150       160       170    

          180       190       200       210       220       230    
pF1KB9 SPRDITLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTL
       :::::::::::::::::::::::::.:.::::::::::::::::::::::::::::::::
XP_011 SPRDITLKWFKNGNELSDFQTNVDPAGDSVSYSIHSTAKVVLTREDVHSQVICEVAHVTL
          180       190       200       210       220       230    

          240       250       260       270       280       290    
pF1KB9 QGDPLRGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QGDPLRGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSR
          240       250       260       270       280       290    

          300       310       320       330       340       350    
pF1KB9 TETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKE
       ::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TETASTLTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKE
          300       310       320       330       340       350    

          360       370       380       390       400       410    
pF1KB9 QGSNTAAENTGSNERNIYIVVGVVCTLLVALLMAALYLVRIRQKKAQGSTSSTRLHEPEK
       :::::: .                                                    
XP_011 QGSNTAPDLLCASFCSSMISFPASTIQ                                 
          360       370       380                                  

>>NP_001129316 (OMIM: 603889) signal-regulatory protein   (398 aa)
 initn: 2149 init1: 1507 opt: 2156  Z-score: 1757.5  bits: 334.4 E(85289): 3.7e-91
Smith-Waterman score: 2156; 84.6% identity (91.4% similar) in 397 aa overlap (3-398:8-397)

                    10        20        30        40        50     
pF1KB9      MEPAGPAPGRLGPLLCLLLAASCAWSGVAGEEELQVIQPDKSVSVAAGESAILHC
              :  :.:  :   . :::.     .::::::::::::::::.:::::::: :::
NP_001 MPVPASWPHLPSPFLL---MTLLLG---RLTGVAGEEELQVIQPDKSISVAAGESATLHC
               10           20           30        40        50    

          60        70        80        90       100       110     
pF1KB9 TVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPAD
       :::::::::::::::::::.:::::::::::::::::::. :::.:::::: ::::::::
NP_001 TVTSLIPVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISNITPAD
           60        70        80        90       100       110    

         120       130        140       150       160       170    
pF1KB9 AGTYYCVKFRKGSPD-TEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGF
       ::::::::::::::: .:::::::::::::::::::::::::::::::::::::::::::
NP_001 AGTYYCVKFRKGSPDHVEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGF
          120       130       140       150       160       170    

          180       190       200       210       220       230    
pF1KB9 SPRDITLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTL
       :::::::::::::::::::::::::.:.::::::::::::::::::::::::::::::::
NP_001 SPRDITLKWFKNGNELSDFQTNVDPAGDSVSYSIHSTAKVVLTREDVHSQVICEVAHVTL
          180       190       200       210       220       230    

          240       250       260       270       280       290    
pF1KB9 QGDPLRGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QGDPLRGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSR
          240       250       260       270       280       290    

          300       310       320       330       340       350    
pF1KB9 TETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKE
       ::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TETASTLTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKE
          300       310       320       330       340       350    

          360       370       380       390       400       410    
pF1KB9 QGSNTAAENTGSNERNIYIVVGVVCTLLVALLMAALYLVRIRQKKAQGSTSSTRLHEPEK
       ::::::   . ..   . :.  .   .:... ....: :  .::                
NP_001 QGSNTAPGPALASAAPLLIAFLLGPKVLLVVGVSVIY-VYWKQKA               
          360       370       380       390                        

          420       430       440       450       460       470    
pF1KB9 NAREITQDTNDITYADLNLPKGKKPAPQAAEPNNHTEYASIQTSPQPASEDTLTYADLDM

>>NP_001316086 (OMIM: 603889) signal-regulatory protein   (398 aa)
 initn: 2149 init1: 1507 opt: 2156  Z-score: 1757.5  bits: 334.4 E(85289): 3.7e-91
Smith-Waterman score: 2156; 84.6% identity (91.4% similar) in 397 aa overlap (3-398:8-397)

                    10        20        30        40        50     
pF1KB9      MEPAGPAPGRLGPLLCLLLAASCAWSGVAGEEELQVIQPDKSVSVAAGESAILHC
              :  :.:  :   . :::.     .::::::::::::::::.:::::::: :::
NP_001 MPVPASWPHLPSPFLL---MTLLLG---RLTGVAGEEELQVIQPDKSISVAAGESATLHC
               10           20           30        40        50    

          60        70        80        90       100       110     
pF1KB9 TVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPAD
       :::::::::::::::::::.:::::::::::::::::::. :::.:::::: ::::::::
NP_001 TVTSLIPVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISNITPAD
           60        70        80        90       100       110    

         120       130        140       150       160       170    
pF1KB9 AGTYYCVKFRKGSPD-TEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGF
       ::::::::::::::: .:::::::::::::::::::::::::::::::::::::::::::
NP_001 AGTYYCVKFRKGSPDHVEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGF
          120       130       140       150       160       170    

          180       190       200       210       220       230    
pF1KB9 SPRDITLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTL
       :::::::::::::::::::::::::.:.::::::::::::::::::::::::::::::::
NP_001 SPRDITLKWFKNGNELSDFQTNVDPAGDSVSYSIHSTAKVVLTREDVHSQVICEVAHVTL
          180       190       200       210       220       230    

          240       250       260       270       280       290    
pF1KB9 QGDPLRGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QGDPLRGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSR
          240       250       260       270       280       290    

          300       310       320       330       340       350    
pF1KB9 TETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKE
       ::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TETASTLTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKE
          300       310       320       330       340       350    

          360       370       380       390       400       410    
pF1KB9 QGSNTAAENTGSNERNIYIVVGVVCTLLVALLMAALYLVRIRQKKAQGSTSSTRLHEPEK
       ::::::   . ..   . :.  .   .:... ....: :  .::                
NP_001 QGSNTAPGPALASAAPLLIAFLLGPKVLLVVGVSVIY-VYWKQKA               
          360       370       380       390                        

          420       430       440       450       460       470    
pF1KB9 NAREITQDTNDITYADLNLPKGKKPAPQAAEPNNHTEYASIQTSPQPASEDTLTYADLDM

>>XP_005260698 (OMIM: 603889) PREDICTED: signal-regulato  (397 aa)
 initn: 1357 init1: 1357 opt: 1974  Z-score: 1610.6  bits: 307.2 E(85289): 5.7e-83
Smith-Waterman score: 1974; 77.8% identity (89.9% similar) in 388 aa overlap (6-392:4-391)

               10        20        30        40        50        60
pF1KB9 MEPAGPAPGRLGPLLCLLLAASCAWSGVAGEEELQVIQPDKSVSVAAGESAILHCTVTSL
            ::     :   :::.   . .:::::.:::::::.::::::::::: :.:..:::
XP_005   MPVPASWPHPPCPFLLLTLLLGLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSL
                 10        20        30        40        50        

               70        80        90       100       110       120
pF1KB9 IPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTYY
       ::::::.:::::: .:::::::::::::::::::: :::.:.::::::::::::::::::
XP_005 IPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYY
       60        70        80        90       100       110        

              130        140       150       160       170         
pF1KB9 CVKFRKGSPD-TEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDI
       :::::::::: .:::::::::::::::::::::::::.::::.:::::::::::::::::
XP_005 CVKFRKGSPDDVEFKSGAGTELSVRAKPSAPVVSGPAVRATPEHTVSFTCESHGFSPRDI
      120       130       140       150       160       170        

     180       190       200       210       220       230         
pF1KB9 TLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPL
       ::::::::::::::::::::.:.::::::::::.::::: :::::::::.::.:::::::
XP_005 TLKWFKNGNELSDFQTNVDPAGDSVSYSIHSTARVVLTRGDVHSQVICEIAHITLQGDPL
      180       190       200       210       220       230        

     240       250       260       270       280       290         
pF1KB9 RGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETAS
       ::::::::.:::::::::::::.:::::.:::::: .:::. ::::::::::::::::::
XP_005 RGTANLSEAIRVPPTLEVTQQPMRAENQANVTCQVSNFYPRGLQLTWLENGNVSRTETAS
      240       250       260       270       280       290        

     300       310       320       330       340       350         
pF1KB9 TVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNT
       :. ::::::::::::::::. :::::: :::::::::: :::::. :..::: ::.::. 
XP_005 TLIENKDGTYNWMSWLLVNTCAHRDDVVLTCQVEHDGQQAVSKSYALEISAHQKEHGSDI
      300       310       320       330       340       350        

     360       370       380       390       400       410         
pF1KB9 AAENTGSNERNIYIVVGVVCTLLVALLMAALYLVRIRQKKAQGSTSSTRLHEPEKNAREI
       . : . .    . ... .   ::... ..:.:.                           
XP_005 THEAALAPTAPLLVALLLGPKLLLVVGVSAIYICWKQKA                     
      360       370       380       390                            

     420       430       440       450       460       470         
pF1KB9 TQDTNDITYADLNLPKGKKPAPQAAEPNNHTEYASIQTSPQPASEDTLTYADLDMVHLNR




503 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 00:08:01 2016 done: Fri Nov  4 00:08:03 2016
 Total Scan time:  8.840 Total Display time:  0.080

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com