Result of FASTA (omim) for
pF1KB9546
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9546, 489 aa
1>>>pF1KB9546 489 - 489 aa - 489 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.1025+/-0.000383; mu= -8.3692+/- 0.024
mean_var=319.2234+/-64.753, 0's: 0 Z-trim(122.8): 95 B-trim: 1586 in 2/58
Lambda= 0.071784
statistics sampled from 41385 (41489) to 41385 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.788), E-opt: 0.2 (0.486), width: 16
Scan time: 11.760
The best scores are: opt bits E(85289)
NP_001129334 (OMIM: 616727) PHD finger protein 21B ( 489) 3227 347.7 4.4e-95
XP_006724185 (OMIM: 616727) PREDICTED: PHD finger ( 489) 3227 347.7 4.4e-95
NP_001229379 (OMIM: 616727) PHD finger protein 21B ( 477) 3121 336.7 8.8e-92
NP_001271225 (OMIM: 616727) PHD finger protein 21B ( 327) 2184 239.5 1.1e-62
NP_612424 (OMIM: 616727) PHD finger protein 21B is ( 531) 2060 226.8 1.1e-58
XP_011528157 (OMIM: 616727) PREDICTED: PHD finger ( 339) 1889 209.0 1.7e-53
XP_016873392 (OMIM: 608325) PREDICTED: PHD finger ( 633) 997 116.8 1.8e-25
XP_016873384 (OMIM: 608325) PREDICTED: PHD finger ( 640) 997 116.8 1.8e-25
XP_016873391 (OMIM: 608325) PREDICTED: PHD finger ( 633) 995 116.6 2.1e-25
XP_011518481 (OMIM: 608325) PREDICTED: PHD finger ( 634) 995 116.6 2.1e-25
NP_057705 (OMIM: 608325) PHD finger protein 21A is ( 634) 995 116.6 2.1e-25
XP_016873385 (OMIM: 608325) PREDICTED: PHD finger ( 640) 995 116.6 2.1e-25
XP_016873383 (OMIM: 608325) PREDICTED: PHD finger ( 641) 995 116.6 2.1e-25
XP_016873395 (OMIM: 608325) PREDICTED: PHD finger ( 601) 856 102.2 4.3e-21
XP_016873390 (OMIM: 608325) PREDICTED: PHD finger ( 636) 718 87.9 9.1e-17
XP_016873397 (OMIM: 608325) PREDICTED: PHD finger ( 553) 615 77.2 1.3e-13
XP_016873396 (OMIM: 608325) PREDICTED: PHD finger ( 597) 615 77.2 1.4e-13
XP_016873394 (OMIM: 608325) PREDICTED: PHD finger ( 604) 615 77.2 1.4e-13
XP_016873388 (OMIM: 608325) PREDICTED: PHD finger ( 636) 615 77.3 1.5e-13
XP_016873387 (OMIM: 608325) PREDICTED: PHD finger ( 636) 615 77.3 1.5e-13
XP_016873386 (OMIM: 608325) PREDICTED: PHD finger ( 636) 615 77.3 1.5e-13
XP_016873389 (OMIM: 608325) PREDICTED: PHD finger ( 636) 615 77.3 1.5e-13
XP_016873380 (OMIM: 608325) PREDICTED: PHD finger ( 680) 615 77.3 1.6e-13
XP_016873381 (OMIM: 608325) PREDICTED: PHD finger ( 680) 615 77.3 1.6e-13
NP_001095272 (OMIM: 608325) PHD finger protein 21A ( 680) 615 77.3 1.6e-13
XP_011518477 (OMIM: 608325) PREDICTED: PHD finger ( 680) 615 77.3 1.6e-13
XP_011518475 (OMIM: 608325) PREDICTED: PHD finger ( 681) 615 77.3 1.6e-13
XP_005253022 (OMIM: 608325) PREDICTED: PHD finger ( 681) 615 77.3 1.6e-13
XP_011518476 (OMIM: 608325) PREDICTED: PHD finger ( 681) 615 77.3 1.6e-13
XP_016873379 (OMIM: 608325) PREDICTED: PHD finger ( 686) 615 77.3 1.6e-13
XP_016873377 (OMIM: 608325) PREDICTED: PHD finger ( 687) 615 77.3 1.6e-13
XP_016873378 (OMIM: 608325) PREDICTED: PHD finger ( 687) 615 77.3 1.6e-13
XP_016873376 (OMIM: 608325) PREDICTED: PHD finger ( 688) 615 77.3 1.6e-13
XP_011518466 (OMIM: 608325) PREDICTED: PHD finger ( 688) 615 77.3 1.6e-13
XP_011518471 (OMIM: 608325) PREDICTED: PHD finger ( 688) 615 77.3 1.6e-13
XP_011518470 (OMIM: 608325) PREDICTED: PHD finger ( 688) 615 77.3 1.6e-13
XP_011518464 (OMIM: 608325) PREDICTED: PHD finger ( 688) 615 77.3 1.6e-13
XP_011518463 (OMIM: 608325) PREDICTED: PHD finger ( 688) 615 77.3 1.6e-13
XP_011518468 (OMIM: 608325) PREDICTED: PHD finger ( 688) 615 77.3 1.6e-13
XP_011518459 (OMIM: 608325) PREDICTED: PHD finger ( 688) 615 77.3 1.6e-13
XP_016873375 (OMIM: 608325) PREDICTED: PHD finger ( 688) 615 77.3 1.6e-13
XP_011518469 (OMIM: 608325) PREDICTED: PHD finger ( 688) 615 77.3 1.6e-13
XP_011518467 (OMIM: 608325) PREDICTED: PHD finger ( 688) 615 77.3 1.6e-13
XP_011518462 (OMIM: 608325) PREDICTED: PHD finger ( 688) 615 77.3 1.6e-13
XP_011518460 (OMIM: 608325) PREDICTED: PHD finger ( 688) 615 77.3 1.6e-13
XP_016873374 (OMIM: 608325) PREDICTED: PHD finger ( 688) 615 77.3 1.6e-13
XP_016873382 (OMIM: 608325) PREDICTED: PHD finger ( 656) 476 62.9 3.3e-09
XP_016873393 (OMIM: 608325) PREDICTED: PHD finger ( 623) 469 62.1 5.2e-09
>>NP_001129334 (OMIM: 616727) PHD finger protein 21B iso (489 aa)
initn: 3227 init1: 3227 opt: 3227 Z-score: 1828.0 bits: 347.7 E(85289): 4.4e-95
Smith-Waterman score: 3227; 100.0% identity (100.0% similar) in 489 aa overlap (1-489:1-489)
10 20 30 40 50 60
pF1KB9 MELQSRPEALAVELARHQNGDLKKQLHERQPRIAALSDKQALGTITAVPVTGPQVSSLQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MELQSRPEALAVELARHQNGDLKKQLHERQPRIAALSDKQALGTITAVPVTGPQVSSLQR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LAGQGAAVLPQVRPKTLIPDSLPVAPGRDRPPKQPPTFQKATVVSVKNPSPALPTANNTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAGQGAAVLPQVRPKTLIPDSLPVAPGRDRPPKQPPTFQKATVVSVKNPSPALPTANNTV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 SHVPAPGSQPQALAEPAALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SHVPAPGSQPQALAEPAALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 LLISADNKVIIIQPQVQTQPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLISADNKVIIIQPQVQTQPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 VALGLVTTEHLEEIQSKRQERKRRSTANPAYSGLLETERKRLASNYLNNPLFLTARANED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VALGLVTTEHLEEIQSKRQERKRRSTANPAYSGLLETERKRLASNYLNNPLFLTARANED
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 PCWKNEITHDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PCWKNEITHDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 KDEGVPWTGMLAIVHSYVTHKTVKEEEKQKLLQRGSELQNEHQQLEERDRRLASAVQKCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KDEGVPWTGMLAIVHSYVTHKTVKEEEKQKLLQRGSELQNEHQQLEERDRRLASAVQKCL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 ELKTSLLARQRGTQSSLDRLRALLRLIQGEQLLQVTMTTTSPAPLLAGPWTKPSVAATHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELKTSLLARQRGTQSSLDRLRALLRLIQGEQLLQVTMTTTSPAPLLAGPWTKPSVAATHP
430 440 450 460 470 480
pF1KB9 TVQHPQGHN
:::::::::
NP_001 TVQHPQGHN
>>XP_006724185 (OMIM: 616727) PREDICTED: PHD finger prot (489 aa)
initn: 3227 init1: 3227 opt: 3227 Z-score: 1828.0 bits: 347.7 E(85289): 4.4e-95
Smith-Waterman score: 3227; 100.0% identity (100.0% similar) in 489 aa overlap (1-489:1-489)
10 20 30 40 50 60
pF1KB9 MELQSRPEALAVELARHQNGDLKKQLHERQPRIAALSDKQALGTITAVPVTGPQVSSLQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MELQSRPEALAVELARHQNGDLKKQLHERQPRIAALSDKQALGTITAVPVTGPQVSSLQR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LAGQGAAVLPQVRPKTLIPDSLPVAPGRDRPPKQPPTFQKATVVSVKNPSPALPTANNTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LAGQGAAVLPQVRPKTLIPDSLPVAPGRDRPPKQPPTFQKATVVSVKNPSPALPTANNTV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 SHVPAPGSQPQALAEPAALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SHVPAPGSQPQALAEPAALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 LLISADNKVIIIQPQVQTQPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LLISADNKVIIIQPQVQTQPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 VALGLVTTEHLEEIQSKRQERKRRSTANPAYSGLLETERKRLASNYLNNPLFLTARANED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VALGLVTTEHLEEIQSKRQERKRRSTANPAYSGLLETERKRLASNYLNNPLFLTARANED
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 PCWKNEITHDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PCWKNEITHDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 KDEGVPWTGMLAIVHSYVTHKTVKEEEKQKLLQRGSELQNEHQQLEERDRRLASAVQKCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KDEGVPWTGMLAIVHSYVTHKTVKEEEKQKLLQRGSELQNEHQQLEERDRRLASAVQKCL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 ELKTSLLARQRGTQSSLDRLRALLRLIQGEQLLQVTMTTTSPAPLLAGPWTKPSVAATHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ELKTSLLARQRGTQSSLDRLRALLRLIQGEQLLQVTMTTTSPAPLLAGPWTKPSVAATHP
430 440 450 460 470 480
pF1KB9 TVQHPQGHN
:::::::::
XP_006 TVQHPQGHN
>>NP_001229379 (OMIM: 616727) PHD finger protein 21B iso (477 aa)
initn: 3121 init1: 3121 opt: 3121 Z-score: 1768.8 bits: 336.7 E(85289): 8.8e-92
Smith-Waterman score: 3121; 100.0% identity (100.0% similar) in 472 aa overlap (18-489:6-477)
10 20 30 40 50 60
pF1KB9 MELQSRPEALAVELARHQNGDLKKQLHERQPRIAALSDKQALGTITAVPVTGPQVSSLQR
:::::::::::::::::::::::::::::::::::::::::::
NP_001 MRRQPQNGDLKKQLHERQPRIAALSDKQALGTITAVPVTGPQVSSLQR
10 20 30 40
70 80 90 100 110 120
pF1KB9 LAGQGAAVLPQVRPKTLIPDSLPVAPGRDRPPKQPPTFQKATVVSVKNPSPALPTANNTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAGQGAAVLPQVRPKTLIPDSLPVAPGRDRPPKQPPTFQKATVVSVKNPSPALPTANNTV
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB9 SHVPAPGSQPQALAEPAALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SHVPAPGSQPQALAEPAALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQP
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB9 LLISADNKVIIIQPQVQTQPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLISADNKVIIIQPQVQTQPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFM
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB9 VALGLVTTEHLEEIQSKRQERKRRSTANPAYSGLLETERKRLASNYLNNPLFLTARANED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VALGLVTTEHLEEIQSKRQERKRRSTANPAYSGLLETERKRLASNYLNNPLFLTARANED
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB9 PCWKNEITHDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PCWKNEITHDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALK
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB9 KDEGVPWTGMLAIVHSYVTHKTVKEEEKQKLLQRGSELQNEHQQLEERDRRLASAVQKCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KDEGVPWTGMLAIVHSYVTHKTVKEEEKQKLLQRGSELQNEHQQLEERDRRLASAVQKCL
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB9 ELKTSLLARQRGTQSSLDRLRALLRLIQGEQLLQVTMTTTSPAPLLAGPWTKPSVAATHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELKTSLLARQRGTQSSLDRLRALLRLIQGEQLLQVTMTTTSPAPLLAGPWTKPSVAATHP
410 420 430 440 450 460
pF1KB9 TVQHPQGHN
:::::::::
NP_001 TVQHPQGHN
470
>>NP_001271225 (OMIM: 616727) PHD finger protein 21B iso (327 aa)
initn: 2184 init1: 2184 opt: 2184 Z-score: 1246.7 bits: 239.5 E(85289): 1.1e-62
Smith-Waterman score: 2184; 100.0% identity (100.0% similar) in 327 aa overlap (163-489:1-327)
140 150 160 170 180 190
pF1KB9 LAEPAALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQPLLISADNKVIII
::::::::::::::::::::::::::::::
NP_001 MAPSTAVSVVSDSIKVQPLLISADNKVIII
10 20 30
200 210 220 230 240 250
pF1KB9 QPQVQTQPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFMVALGLVTTEHLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QPQVQTQPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFMVALGLVTTEHLE
40 50 60 70 80 90
260 270 280 290 300 310
pF1KB9 EIQSKRQERKRRSTANPAYSGLLETERKRLASNYLNNPLFLTARANEDPCWKNEITHDEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EIQSKRQERKRRSTANPAYSGLLETERKRLASNYLNNPLFLTARANEDPCWKNEITHDEH
100 110 120 130 140 150
320 330 340 350 360 370
pF1KB9 CAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALKKDEGVPWTGMLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALKKDEGVPWTGMLA
160 170 180 190 200 210
380 390 400 410 420 430
pF1KB9 IVHSYVTHKTVKEEEKQKLLQRGSELQNEHQQLEERDRRLASAVQKCLELKTSLLARQRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IVHSYVTHKTVKEEEKQKLLQRGSELQNEHQQLEERDRRLASAVQKCLELKTSLLARQRG
220 230 240 250 260 270
440 450 460 470 480
pF1KB9 TQSSLDRLRALLRLIQGEQLLQVTMTTTSPAPLLAGPWTKPSVAATHPTVQHPQGHN
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TQSSLDRLRALLRLIQGEQLLQVTMTTTSPAPLLAGPWTKPSVAATHPTVQHPQGHN
280 290 300 310 320
>>NP_612424 (OMIM: 616727) PHD finger protein 21B isofor (531 aa)
initn: 2032 init1: 2032 opt: 2060 Z-score: 1174.3 bits: 226.8 E(85289): 1.1e-58
Smith-Waterman score: 3070; 91.9% identity (91.9% similar) in 521 aa overlap (11-489:11-531)
10 20 30 40 50 60
pF1KB9 MELQSRPEALAVELARHQNGDLKKQLHERQPRIAALSDKQALGTITAVPVTGPQVSSLQR
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_612 MELQSRPEALAVELARHQNGDLKKQLHERQPRIAALSDKQALGTITAVPVTGPQVSSLQR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LAGQGAAVLPQVRPKTLIPDSLPVAPGRDRPPKQPPTFQKATVVSVKNPSPALPTANNTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_612 LAGQGAAVLPQVRPKTLIPDSLPVAPGRDRPPKQPPTFQKATVVSVKNPSPALPTANNTV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 SHVPAPGSQPQALAEPAALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_612 SHVPAPGSQPQALAEPAALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQP
130 140 150 160 170 180
190
pF1KB9 LLISADNK------------------------------------------VIIIQPQVQT
:::::::: ::::::::::
NP_612 LLISADNKPPPRLLSSPHPATHHCPLHPSSLPLTPPSPSLSPSPLHGIFQVIIIQPQVQT
190 200 210 220 230 240
200 210 220 230 240 250
pF1KB9 QPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFMVALGLVTTEHLEEIQSKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_612 QPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFMVALGLVTTEHLEEIQSKR
250 260 270 280 290 300
260 270 280 290 300 310
pF1KB9 QERKRRSTANPAYSGLLETERKRLASNYLNNPLFLTARANEDPCWKNEITHDEHCAACKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_612 QERKRRSTANPAYSGLLETERKRLASNYLNNPLFLTARANEDPCWKNEITHDEHCAACKR
310 320 330 340 350 360
320 330 340 350 360 370
pF1KB9 GANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALKKDEGVPWTGMLAIVHSYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_612 GANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALKKDEGVPWTGMLAIVHSYV
370 380 390 400 410 420
380 390 400 410 420 430
pF1KB9 THKTVKEEEKQKLLQRGSELQNEHQQLEERDRRLASAVQKCLELKTSLLARQRGTQSSLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_612 THKTVKEEEKQKLLQRGSELQNEHQQLEERDRRLASAVQKCLELKTSLLARQRGTQSSLD
430 440 450 460 470 480
440 450 460 470 480
pF1KB9 RLRALLRLIQGEQLLQVTMTTTSPAPLLAGPWTKPSVAATHPTVQHPQGHN
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_612 RLRALLRLIQGEQLLQVTMTTTSPAPLLAGPWTKPSVAATHPTVQHPQGHN
490 500 510 520 530
>>XP_011528157 (OMIM: 616727) PREDICTED: PHD finger prot (339 aa)
initn: 1885 init1: 1885 opt: 1889 Z-score: 1081.4 bits: 209.0 E(85289): 1.7e-53
Smith-Waterman score: 1889; 98.7% identity (99.0% similar) in 301 aa overlap (1-301:1-301)
10 20 30 40 50 60
pF1KB9 MELQSRPEALAVELARHQNGDLKKQLHERQPRIAALSDKQALGTITAVPVTGPQVSSLQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MELQSRPEALAVELARHQNGDLKKQLHERQPRIAALSDKQALGTITAVPVTGPQVSSLQR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LAGQGAAVLPQVRPKTLIPDSLPVAPGRDRPPKQPPTFQKATVVSVKNPSPALPTANNTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LAGQGAAVLPQVRPKTLIPDSLPVAPGRDRPPKQPPTFQKATVVSVKNPSPALPTANNTV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 SHVPAPGSQPQALAEPAALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SHVPAPGSQPQALAEPAALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 LLISADNKVIIIQPQVQTQPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LLISADNKVIIIQPQVQTQPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 VALGLVTTEHLEEIQSKRQERKRRSTANPAYSGLLETERKRLASNYLNNPLFLTARANED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
XP_011 VALGLVTTEHLEEIQSKRQERKRRSTANPAYSGLLETERKRLASNYLNNPLFLTARGPLP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 PCWKNEITHDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALK
:
XP_011 PLPAVPQCRTSGSHILAFRQQQEAASSLQLENHSPTSRK
310 320 330
>>XP_016873392 (OMIM: 608325) PREDICTED: PHD finger prot (633 aa)
initn: 978 init1: 552 opt: 997 Z-score: 578.2 bits: 116.8 E(85289): 1.8e-25
Smith-Waterman score: 1010; 38.9% identity (68.9% similar) in 447 aa overlap (49-489:212-621)
20 30 40 50 60 70
pF1KB9 NGDLKKQLHERQPRIAALSDKQALGTITAVPVTGPQVSSLQRLAGQGAAVLPQVRPKTLI
:. :: ::. . ::::::: .
XP_016 TSSKVTGPGAEAVQIVAKNTVTLVQATPPQPIKVPQFIPPPRLTPR-PNFLPQVRPKPVA
190 200 210 220 230 240
80 90 100 110 120 130
pF1KB9 PDSLPVAPGRDRPP--KQPPTFQKATVVSVKNPSPALPTANNTVSHVPAPGSQPQALAEP
...:.::. :: : .:. .... .:. .:::..:.. : . ..: ..:.
XP_016 QNNIPIAPA--PPPMLAAPQLIQRPVMLTKFTPT-TLPTSQNSIHPVRVVNGQTATIAKT
250 260 270 280 290
140 150 160 170 180 190
pF1KB9 AALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQPLLISADNKVIIIQPQV
.:. :.: :. ..:.. : .:.: :: . .:..
XP_016 FPMAQ-LTS------IVIATPGTRLA-GPQT----------VQ-----------LSKPSL
300 310 320
200 210 220 230 240 250
pF1KB9 QTQPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFMVALGLVTTEHLEEIQS
. : :..:. :.: . ... .: .:::.:.::::.::::: .:::::::
XP_016 EKQ---TVKSHTETDEKQTESRTITPPAAPKPKREENPQKLAFMVSLGLVTHDHLEEIQS
330 340 350 360 370 380
260 270 280 290 300 310
pF1KB9 KRQERKRRSTANPAYSG-LLETERKRLASNYLNNPLF--LTARANEDPCWKNEITHDEHC
::::::::.::::.::: ..: :::. : .:::. . ::::. : . :.. :
XP_016 KRQERKRRTTANPVYSGAVFEPERKKSAVTYLNSTMHPGTRKRANEEH-WPKGDIHEDFC
390 400 410 420 430 440
320 330 340 350 360 370
pF1KB9 AACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALKKDEGVPWTGMLAI
..:.....: : :: .:::.::.::::: :::.:.:::::.. :::.:..:: : :::
XP_016 SVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKKEEAIPWPGTLAI
450 460 470 480 490 500
380 390 400 410 420 430
pF1KB9 VHSYVTHKTVKEEEKQKLLQRGSELQNEHQQLEERDRRLASAVQKCLELKTSLLARQRGT
::::...:..:::::::::. .:.:..:..:::.. ..:.....::.:.:...::::.
XP_016 VHSYIAYKAAKEEEKQKLLKWSSDLKQEREQLEQKVKQLSNSISKCMEMKNTILARQKEM
510 520 530 540 550 560
440 450 460 470 480
pF1KB9 QSSLDRLRALLRLIQGEQLLQVTMTTTSPAPLLAGPW-TKPSVAATHPTVQHPQGHN
.:::.... :.:::.: .: . . . .. . . :: : :. ::: . :....
XP_016 HSSLEKVKQLIRLIHGIDLSKPVDSEATVGAISNGPDCTPPANAATSTPAPSPSSQSCTA
570 580 590 600 610 620
XP_016 NCNQGEETK
630
>>XP_016873384 (OMIM: 608325) PREDICTED: PHD finger prot (640 aa)
initn: 979 init1: 552 opt: 997 Z-score: 578.2 bits: 116.8 E(85289): 1.8e-25
Smith-Waterman score: 1010; 38.9% identity (68.9% similar) in 447 aa overlap (49-489:219-628)
20 30 40 50 60 70
pF1KB9 NGDLKKQLHERQPRIAALSDKQALGTITAVPVTGPQVSSLQRLAGQGAAVLPQVRPKTLI
:. :: ::. . ::::::: .
XP_016 TSSKVTGPGAEAVQIVAKNTVTLVQATPPQPIKVPQFIPPPRLTPR-PNFLPQVRPKPVA
190 200 210 220 230 240
80 90 100 110 120 130
pF1KB9 PDSLPVAPGRDRPP--KQPPTFQKATVVSVKNPSPALPTANNTVSHVPAPGSQPQALAEP
...:.::. :: : .:. .... .:. .:::..:.. : . ..: ..:.
XP_016 QNNIPIAPA--PPPMLAAPQLIQRPVMLTKFTPT-TLPTSQNSIHPVRVVNGQTATIAKT
250 260 270 280 290 300
140 150 160 170 180 190
pF1KB9 AALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQPLLISADNKVIIIQPQV
.:. :.: :. ..:.. : .:.: :: . .:..
XP_016 FPMAQ-LTS------IVIATPGTRLA-GPQT----------VQ-----------LSKPSL
310 320 330
200 210 220 230 240 250
pF1KB9 QTQPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFMVALGLVTTEHLEEIQS
. : :..:. :.: . ... .: .:::.:.::::.::::: .:::::::
XP_016 EKQ---TVKSHTETDEKQTESRTITPPAAPKPKREENPQKLAFMVSLGLVTHDHLEEIQS
340 350 360 370 380 390
260 270 280 290 300 310
pF1KB9 KRQERKRRSTANPAYSG-LLETERKRLASNYLNNPLF--LTARANEDPCWKNEITHDEHC
::::::::.::::.::: ..: :::. : .:::. . ::::. : . :.. :
XP_016 KRQERKRRTTANPVYSGAVFEPERKKSAVTYLNSTMHPGTRKRANEEH-WPKGDIHEDFC
400 410 420 430 440 450
320 330 340 350 360 370
pF1KB9 AACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALKKDEGVPWTGMLAI
..:.....: : :: .:::.::.::::: :::.:.:::::.. :::.:..:: : :::
XP_016 SVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKKEEAIPWPGTLAI
460 470 480 490 500 510
380 390 400 410 420 430
pF1KB9 VHSYVTHKTVKEEEKQKLLQRGSELQNEHQQLEERDRRLASAVQKCLELKTSLLARQRGT
::::...:..:::::::::. .:.:..:..:::.. ..:.....::.:.:...::::.
XP_016 VHSYIAYKAAKEEEKQKLLKWSSDLKQEREQLEQKVKQLSNSISKCMEMKNTILARQKEM
520 530 540 550 560 570
440 450 460 470 480
pF1KB9 QSSLDRLRALLRLIQGEQLLQVTMTTTSPAPLLAGPW-TKPSVAATHPTVQHPQGHN
.:::.... :.:::.: .: . . . .. . . :: : :. ::: . :....
XP_016 HSSLEKVKQLIRLIHGIDLSKPVDSEATVGAISNGPDCTPPANAATSTPAPSPSSQSCTA
580 590 600 610 620 630
XP_016 NCNQGEETK
640
>>XP_016873391 (OMIM: 608325) PREDICTED: PHD finger prot (633 aa)
initn: 978 init1: 552 opt: 995 Z-score: 577.1 bits: 116.6 E(85289): 2.1e-25
Smith-Waterman score: 1010; 38.9% identity (68.9% similar) in 447 aa overlap (49-489:212-621)
20 30 40 50 60 70
pF1KB9 NGDLKKQLHERQPRIAALSDKQALGTITAVPVTGPQVSSLQRLAGQGAAVLPQVRPKTLI
:. :: ::. . ::::::: .
XP_016 SSKVTGPGAEAVQIVAKNTVTLQVQATPPQPIKVPQFIPPPRLTPR-PNFLPQVRPKPVA
190 200 210 220 230 240
80 90 100 110 120 130
pF1KB9 PDSLPVAPGRDRPP--KQPPTFQKATVVSVKNPSPALPTANNTVSHVPAPGSQPQALAEP
...:.::. :: : .:. .... .:. .:::..:.. : . ..: ..:.
XP_016 QNNIPIAPA--PPPMLAAPQLIQRPVMLTKFTPT-TLPTSQNSIHPVRVVNGQTATIAKT
250 260 270 280 290
140 150 160 170 180 190
pF1KB9 AALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQPLLISADNKVIIIQPQV
.:. :.: :. ..:.. : .:.: :: . .:..
XP_016 FPMAQ-LTS------IVIATPGTRLA-GPQT----------VQ-----------LSKPSL
300 310 320
200 210 220 230 240 250
pF1KB9 QTQPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFMVALGLVTTEHLEEIQS
. : :..:. :.: . ... .: .:::.:.::::.::::: .:::::::
XP_016 EKQ---TVKSHTETDEKQTESRTITPPAAPKPKREENPQKLAFMVSLGLVTHDHLEEIQS
330 340 350 360 370 380
260 270 280 290 300 310
pF1KB9 KRQERKRRSTANPAYSG-LLETERKRLASNYLNNPLF--LTARANEDPCWKNEITHDEHC
::::::::.::::.::: ..: :::. : .:::. . ::::. : . :.. :
XP_016 KRQERKRRTTANPVYSGAVFEPERKKSAVTYLNSTMHPGTRKRANEEH-WPKGDIHEDFC
390 400 410 420 430 440
320 330 340 350 360 370
pF1KB9 AACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALKKDEGVPWTGMLAI
..:.....: : :: .:::.::.::::: :::.:.:::::.. :::.:..:: : :::
XP_016 SVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKKEEAIPWPGTLAI
450 460 470 480 490 500
380 390 400 410 420 430
pF1KB9 VHSYVTHKTVKEEEKQKLLQRGSELQNEHQQLEERDRRLASAVQKCLELKTSLLARQRGT
::::...:..:::::::::. .:.:..:..:::.. ..:.....::.:.:...::::.
XP_016 VHSYIAYKAAKEEEKQKLLKWSSDLKQEREQLEQKVKQLSNSISKCMEMKNTILARQKEM
510 520 530 540 550 560
440 450 460 470 480
pF1KB9 QSSLDRLRALLRLIQGEQLLQVTMTTTSPAPLLAGPW-TKPSVAATHPTVQHPQGHN
.:::.... :.:::.: .: . . . .. . . :: : :. ::: . :....
XP_016 HSSLEKVKQLIRLIHGIDLSKPVDSEATVGAISNGPDCTPPANAATSTPAPSPSSQSCTA
570 580 590 600 610 620
XP_016 NCNQGEETK
630
>>XP_011518481 (OMIM: 608325) PREDICTED: PHD finger prot (634 aa)
initn: 978 init1: 552 opt: 995 Z-score: 577.1 bits: 116.6 E(85289): 2.1e-25
Smith-Waterman score: 1010; 38.9% identity (68.9% similar) in 447 aa overlap (49-489:213-622)
20 30 40 50 60 70
pF1KB9 NGDLKKQLHERQPRIAALSDKQALGTITAVPVTGPQVSSLQRLAGQGAAVLPQVRPKTLI
:. :: ::. . ::::::: .
XP_011 SSKVTGPGAEAVQIVAKNTVTLQVQATPPQPIKVPQFIPPPRLTPR-PNFLPQVRPKPVA
190 200 210 220 230 240
80 90 100 110 120 130
pF1KB9 PDSLPVAPGRDRPP--KQPPTFQKATVVSVKNPSPALPTANNTVSHVPAPGSQPQALAEP
...:.::. :: : .:. .... .:. .:::..:.. : . ..: ..:.
XP_011 QNNIPIAPA--PPPMLAAPQLIQRPVMLTKFTPT-TLPTSQNSIHPVRVVNGQTATIAKT
250 260 270 280 290
140 150 160 170 180 190
pF1KB9 AALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQPLLISADNKVIIIQPQV
.:. :.: :. ..:.. : .:.: :: . .:..
XP_011 FPMAQ-LTS------IVIATPGTRLA-GPQT----------VQ-----------LSKPSL
300 310 320
200 210 220 230 240 250
pF1KB9 QTQPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFMVALGLVTTEHLEEIQS
. : :..:. :.: . ... .: .:::.:.::::.::::: .:::::::
XP_011 EKQ---TVKSHTETDEKQTESRTITPPAAPKPKREENPQKLAFMVSLGLVTHDHLEEIQS
330 340 350 360 370 380
260 270 280 290 300 310
pF1KB9 KRQERKRRSTANPAYSG-LLETERKRLASNYLNNPLF--LTARANEDPCWKNEITHDEHC
::::::::.::::.::: ..: :::. : .:::. . ::::. : . :.. :
XP_011 KRQERKRRTTANPVYSGAVFEPERKKSAVTYLNSTMHPGTRKRANEEH-WPKGDIHEDFC
390 400 410 420 430 440
320 330 340 350 360 370
pF1KB9 AACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALKKDEGVPWTGMLAI
..:.....: : :: .:::.::.::::: :::.:.:::::.. :::.:..:: : :::
XP_011 SVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKKEEAIPWPGTLAI
450 460 470 480 490 500
380 390 400 410 420 430
pF1KB9 VHSYVTHKTVKEEEKQKLLQRGSELQNEHQQLEERDRRLASAVQKCLELKTSLLARQRGT
::::...:..:::::::::. .:.:..:..:::.. ..:.....::.:.:...::::.
XP_011 VHSYIAYKAAKEEEKQKLLKWSSDLKQEREQLEQKVKQLSNSISKCMEMKNTILARQKEM
510 520 530 540 550 560
440 450 460 470 480
pF1KB9 QSSLDRLRALLRLIQGEQLLQVTMTTTSPAPLLAGPW-TKPSVAATHPTVQHPQGHN
.:::.... :.:::.: .: . . . .. . . :: : :. ::: . :....
XP_011 HSSLEKVKQLIRLIHGIDLSKPVDSEATVGAISNGPDCTPPANAATSTPAPSPSSQSCTA
570 580 590 600 610 620
XP_011 NCNQGEETK
630
489 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 02:05:07 2016 done: Sat Nov 5 02:05:09 2016
Total Scan time: 11.760 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]