Result of FASTA (omim) for
pF1KB9552
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9552, 466 aa
1>>>pF1KB9552 466 - 466 aa - 466 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.5501+/-0.000312; mu= -0.6491+/- 0.020
mean_var=232.4800+/-47.078, 0's: 0 Z-trim(123.7): 144 B-trim: 43 in 1/60
Lambda= 0.084117
statistics sampled from 43717 (43898) to 43717 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.803), E-opt: 0.2 (0.515), width: 16
Scan time: 10.400
The best scores are: opt bits E(85289)
NP_008872 (OMIM: 602229,609136,611584,613266) tran ( 466) 3261 408.2 2.4e-113
NP_000337 (OMIM: 114290,608160,616425) transcripti ( 509) 1350 176.3 1.7e-43
NP_055402 (OMIM: 605923) transcription factor SOX- ( 446) 869 117.9 5.6e-26
NP_071899 (OMIM: 610928,613674) transcription fact ( 414) 436 65.4 3.5e-10
NP_008874 (OMIM: 601947) transcription factor SOX- ( 315) 422 63.6 9.1e-10
NP_060889 (OMIM: 137940,601618,607823) transcripti ( 384) 414 62.7 2.1e-09
NP_003097 (OMIM: 184429,189960,206900) transcripti ( 317) 412 62.4 2.1e-09
NP_009015 (OMIM: 604974) transcription factor SOX- ( 276) 410 62.1 2.2e-09
NP_008873 (OMIM: 601297) protein SOX-15 [Homo sapi ( 233) 408 61.8 2.3e-09
NP_005625 (OMIM: 300123,312000,313430) transcripti ( 446) 407 61.9 4.2e-09
NP_113627 (OMIM: 612202) transcription factor SOX- ( 388) 405 61.6 4.5e-09
NP_003098 (OMIM: 184430) transcription factor SOX- ( 474) 405 61.6 5.3e-09
NP_005977 (OMIM: 602148) transcription factor SOX- ( 391) 400 61.0 6.9e-09
NP_004180 (OMIM: 604747) transcription factor SOX- ( 240) 391 59.7 9.9e-09
NP_003099 (OMIM: 600898,615866) transcription fact ( 441) 381 58.7 3.7e-08
NP_821078 (OMIM: 604975,616803) transcription fact ( 377) 343 54.0 8.1e-07
XP_011519144 (OMIM: 604975,616803) PREDICTED: tran ( 415) 343 54.1 8.7e-07
NP_001248343 (OMIM: 604975,616803) transcription f ( 642) 343 54.2 1.2e-06
XP_016875389 (OMIM: 604975,616803) PREDICTED: tran ( 715) 343 54.2 1.4e-06
XP_016875387 (OMIM: 604975,616803) PREDICTED: tran ( 715) 343 54.2 1.4e-06
XP_016875390 (OMIM: 604975,616803) PREDICTED: tran ( 715) 343 54.2 1.4e-06
XP_016875388 (OMIM: 604975,616803) PREDICTED: tran ( 715) 343 54.2 1.4e-06
XP_016875386 (OMIM: 604975,616803) PREDICTED: tran ( 716) 343 54.2 1.4e-06
NP_001317714 (OMIM: 604975,616803) transcription f ( 728) 343 54.2 1.4e-06
XP_011519140 (OMIM: 604975,616803) PREDICTED: tran ( 729) 343 54.2 1.4e-06
XP_016875385 (OMIM: 604975,616803) PREDICTED: tran ( 750) 343 54.2 1.4e-06
NP_694534 (OMIM: 604975,616803) transcription fact ( 750) 343 54.2 1.4e-06
XP_016875380 (OMIM: 604975,616803) PREDICTED: tran ( 751) 343 54.2 1.4e-06
XP_016875381 (OMIM: 604975,616803) PREDICTED: tran ( 751) 343 54.2 1.4e-06
XP_016875383 (OMIM: 604975,616803) PREDICTED: tran ( 751) 343 54.2 1.4e-06
XP_011519137 (OMIM: 604975,616803) PREDICTED: tran ( 751) 343 54.2 1.4e-06
XP_016875379 (OMIM: 604975,616803) PREDICTED: tran ( 751) 343 54.2 1.4e-06
XP_011519139 (OMIM: 604975,616803) PREDICTED: tran ( 751) 343 54.2 1.4e-06
XP_016875382 (OMIM: 604975,616803) PREDICTED: tran ( 751) 343 54.2 1.4e-06
XP_011519136 (OMIM: 604975,616803) PREDICTED: tran ( 751) 343 54.2 1.4e-06
XP_016875384 (OMIM: 604975,616803) PREDICTED: tran ( 751) 343 54.2 1.4e-06
NP_001248344 (OMIM: 604975,616803) transcription f ( 753) 343 54.2 1.4e-06
XP_011519135 (OMIM: 604975,616803) PREDICTED: tran ( 754) 343 54.2 1.4e-06
NP_008871 (OMIM: 604975,616803) transcription fact ( 763) 343 54.2 1.4e-06
XP_011519134 (OMIM: 604975,616803) PREDICTED: tran ( 764) 343 54.2 1.4e-06
XP_016875378 (OMIM: 604975,616803) PREDICTED: tran ( 792) 343 54.3 1.5e-06
XP_016875377 (OMIM: 604975,616803) PREDICTED: tran ( 793) 343 54.3 1.5e-06
NP_001139283 (OMIM: 607257) transcription factor S ( 801) 338 53.6 2.3e-06
NP_059978 (OMIM: 607257) transcription factor SOX- ( 804) 338 53.6 2.3e-06
NP_001139291 (OMIM: 607257) transcription factor S ( 841) 338 53.7 2.3e-06
NP_201583 (OMIM: 607257) transcription factor SOX- ( 808) 323 51.8 8e-06
NP_003131 (OMIM: 400044,400045,480000) sex-determi ( 204) 309 49.7 8.6e-06
XP_005245680 (OMIM: 604748) PREDICTED: transcripti ( 621) 314 50.7 1.4e-05
NP_005677 (OMIM: 604748) transcription factor SOX- ( 622) 314 50.7 1.4e-05
XP_011532722 (OMIM: 606698) PREDICTED: transcripti ( 448) 293 48.0 6.2e-05
>>NP_008872 (OMIM: 602229,609136,611584,613266) transcri (466 aa)
initn: 3261 init1: 3261 opt: 3261 Z-score: 2155.9 bits: 408.2 E(85289): 2.4e-113
Smith-Waterman score: 3261; 100.0% identity (100.0% similar) in 466 aa overlap (1-466:1-466)
10 20 30 40 50 60
pF1KB9 MAEEQDLSEVELSPVGSEEPRCLSPGSAPSLGPDGGGGGSGLRASPGPGELGKVKKEQQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 MAEEQDLSEVELSPVGSEEPRCLSPGSAPSLGPDGGGGGSGLRASPGPGELGKVKKEQQD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 GEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGASKSKPHVKRPMNAFMVWAQAARR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 GEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGASKSKPHVKRPMNAFMVWAQAARR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 GKAAQGEAECPGGEAEQGGTAAIQAHYKSAHLDHRHPGEGSPMSDGNPEHPSGQSHGPPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 GKAAQGEAECPGGEAEQGGTAAIQAHYKSAHLDHRHPGEGSPMSDGNPEHPSGQSHGPPT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 PPTTPKTELQSGKADPKRDGRSMGEGGKPHIDFGNVDIGEISHEVMSNMETFDVAELDQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 PPTTPKTELQSGKADPKRDGRSMGEGGKPHIDFGNVDIGEISHEVMSNMETFDVAELDQY
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 LPPNGHPGHVSSYSAAGYGLGSALAVASGHSAWISKPPGVALPTVSPPGVDAKAQVKTET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 LPPNGHPGHVSSYSAAGYGLGSALAVASGHSAWISKPPGVALPTVSPPGVDAKAQVKTET
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 AGPQGPPHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYSDHQPSGPYYGHSGQASG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 AGPQGPPHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYSDHQPSGPYYGHSGQASG
370 380 390 400 410 420
430 440 450 460
pF1KB9 LYSAFSYMGPSQRPLYTAISDPSPSGPQSHSPTHWEQPVYTTLSRP
::::::::::::::::::::::::::::::::::::::::::::::
NP_008 LYSAFSYMGPSQRPLYTAISDPSPSGPQSHSPTHWEQPVYTTLSRP
430 440 450 460
>>NP_000337 (OMIM: 114290,608160,616425) transcription f (509 aa)
initn: 1439 init1: 805 opt: 1350 Z-score: 902.0 bits: 176.3 E(85289): 1.7e-43
Smith-Waterman score: 1624; 54.0% identity (72.2% similar) in 493 aa overlap (18-456:13-499)
10 20 30 40 50
pF1KB9 MAEEQDLSEVELSPVGSEEPRCLSPGSAPSLGPDGGGG----GSGLRASPGPGELGKVKK
:. . :: . .:... :..:. ::: . . . :
NP_000 MNLLDPFMKMTDEQEKGLSGAPSPTMSEDSAGSPCPSGSGSDTENTRPQENTFPK
10 20 30 40 50
60 70 80 90 100 110
pF1KB9 EQQD--GEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGASKSKPHVKRPMNAFMVW
. : :...:::::::::::::::.:::::::::::::::.::.::::::::::::::
NP_000 GEPDLKKESEEDKFPVCIREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVW
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB9 AQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQ
::::::::::::::::::::::::::::::::::.::::.:::::::.::::::::::::
NP_000 AQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQ
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB9 PRRRKNGKAAQGEAECPGGEAEQGGTAAIQAHYKSAHLDHRHPGEGSPMSD-GNPEHPSG
:::::. : .:.::: :: . . .: .:. . : : . : ::. .: . ::
NP_000 PRRRKSVKNGQAEAE----EATEQTHISPNAIFKALQADSPHSSSG--MSEVHSPGEHSG
180 190 200 210 220
240 250 260 270 280 290
pF1KB9 QSHGPPTPPTTPKTELQSGKADPKRDGRSMGEGGK-PHIDFGNVDIGEISHEVMSNMETF
::.:::::::::::..: :::: ::.:: . :::. : ::: .:::::.: .:.::.:::
NP_000 QSQGPPTPPTTPKTDVQPGKADLKREGRPLPEGGRQPPIDFRDVDIGELSSDVISNIETF
230 240 250 260 270 280
300 310 320 330 340
pF1KB9 DVAELDQYLPPNGHPG----HVSSYSAAGYGLGSALAV-ASGHSAWISK----PPGVALP
:: :.::::::::::: : . ...::..:. :. ::. .:.:: :: :
NP_000 DVNEFDQYLPPNGHPGVPATHGQVTYTGSYGISSTAATPASAGHVWMSKQQAPPPPPQQP
290 300 310 320 330 340
350 360 370
pF1KB9 TVSPPGVDAKAQVKTE-----TAGPQ---------------------------GPPHYTD
.::. .: : .. .: :: .: ::..
NP_000 PQAPPAPQAPPQPQAAPPQQPAAPPQQPQAHTLTTLSSEPGQSQRTHIKTEQLSPSHYSE
350 360 370 380 390 400
380 390 400 410 420
pF1KB9 QP--STSQIAYTSLSLPHYGSAFPSISRPQFDYSDHQPSGPYYGHS-GQASGLYSAFSYM
: : .::::. ..::::. ..: :.: :.::.::: :. ::.:. ::..::::.:.::
NP_000 QQQHSPQQIAYSPFNLPHYSPSYPPITRSQYDYTDHQNSSSYYSHAAGQGTGLYSTFTYM
410 420 430 440 450 460
430 440 450 460
pF1KB9 GPSQRPLYTAISDPS--PSGPQSHSPTHWEQPVYTTLSRP
.:.:::.:: :.: : :: ::.::: :::
NP_000 NPAQRPMYTPIADTSGVPSIPQTHSPQHWEQPVYTQLTRP
470 480 490 500
>>NP_055402 (OMIM: 605923) transcription factor SOX-8 [H (446 aa)
initn: 1010 init1: 579 opt: 869 Z-score: 587.3 bits: 117.9 E(85289): 5.6e-26
Smith-Waterman score: 1281; 50.2% identity (68.1% similar) in 474 aa overlap (10-466:2-446)
10 20 30 40 50
pF1KB9 MAEEQDLSEVELSPVGSEEPRCLSPGSAPSLG--PDGGGGGSGLRA-SPGPGELG-KVKK
...: . :. : : :.: :.. :. . . : : : :. : :
NP_055 MLDMSEARSQPP-CSPSGTASSMSHVEDSDSDAPPSPAGSEGLGRAGVAVGG
10 20 30 40 50
60 70 80 90 100 110
pF1KB9 EQQD-GEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNG--ASKSKPHVKRPMNAFMV
. : .:: :..::.:::.::::::.::::.::::::: .: : :.:::::::::::::
NP_055 ARGDPAEAADERFPACIRDAVSQVLKGYDWSLVPMPVRGGGGGALKAKPHVKRPMNAFMV
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB9 WAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKY
::::::::::::::::::::::::::::::::.::.::::.:::::::.:::::::::::
NP_055 WAQAARRKLADQYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKDHPDYKY
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB9 QPRRRKNGKAAQGEAECPGGEAEQGGTAAIQAHYKSAHLDHRHPGEGSPMSDGNPEHPSG
::::::..:: :... .: :: : . : ::. . : :. :. : .:
NP_055 QPRRRKSAKA--GHSDSDSG-AELGPHPGGGAVYKA------EAGLGDGHHHGD--H-TG
180 190 200 210
240 250 260 270 280 290
pF1KB9 QSHGPPTPPTTPKTELQSGKADP--KRDGRSMGEGGKPHIDFGNVDIGEISHEVMSNMET
:.:::::::::::::::.. : : : .:: ..:. .:::.::::.:.: :::..:..
NP_055 QTHGPPTPPTTPKTELQQAGAKPELKLEGRRPVDSGRQNIDFSNVDISELSSEVMGTMDA
220 230 240 250 260 270
300 310 320 330 340
pF1KB9 FDVAELDQYLPPNGHPGHVSSYSAAGYGLGSALAVASGHSAWISK--PPGVALPTVSPPG
::: :.::::: .: :. : . :.: :.. .: : : . : :: . :
NP_055 FDVHEFDQYLPLGG-PAP----PEPGQAYGGAYFHAGASPVWAHKSAPSASASPTETGP-
280 290 300 310 320 330
350 360 370 380 390 400
pF1KB9 VDAKAQVKTETAGPQGPPHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQF-----DYSD
. ..::: :. : :: ::: : : : : .:: :. : ::.:
NP_055 --PRPHIKTEQ--PS-PGHYGDQPRGSP-DYGSCS--GQSSATPAAPAGPFAGSQGDYGD
340 350 360 370 380
410 420 430 440 450 460
pF1KB9 HQPSGPYYGHSGQASGLYSAFSYMGPSQRPLYTAISDPSPSGPQSHSPT-HWEQPVYTTL
: :. : .. : : :::. . .: .:: . . . . . : .:::: ::.:::::::
NP_055 LQASSYYGAYPGYAPGLYQYPCFHSP-RRPYASPLLN-GLALPPAHSPTSHWDQPVYTTL
390 400 410 420 430 440
pF1KB9 SRP
.::
NP_055 TRP
>>NP_071899 (OMIM: 610928,613674) transcription factor S (414 aa)
initn: 451 init1: 410 opt: 436 Z-score: 303.8 bits: 65.4 E(85289): 3.5e-10
Smith-Waterman score: 466; 35.4% identity (55.4% similar) in 325 aa overlap (91-410:55-330)
70 80 90 100 110 120
pF1KB9 GEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGASKSKPHVKRPMNAFMVWAQAARR
:. . : .:.. ...::::::::::. :.
NP_071 AGLGPCPWAESLSPIGDMKVKGEAPANSGAPAGAAGRAKGESRIRRPMNAFMVWAKDERK
30 40 50 60 70 80
130 140 150 160 170 180
pF1KB9 KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN
.::.: : :::::::: ::: :. :. ..::::.:::::::.:: .:::.:::.:::::.
NP_071 RLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQ
90 100 110 120 130 140
190 200 210 220 230
pF1KB9 GKAAQGEAECPGGEAEQGGTAAIQAHYKSAHLDHRHPGEGSPMSDG-NPEHP-SGQSHGP
: . . :: . : : :: : : : : :: . . : .: ::
NP_071 VKRLK---RVEGGFLH--GLAEPQA----AALG---PEGGRVAMDGLGLQFPEQGFPAGP
150 160 170 180 190
240 250 260 270 280 290
pF1KB9 PTPPTTPKTELQSGKADPKRDGRSMGEGGKPHIDFGNVDIGEISHEVMSNMETFDVAELD
: : :. ..:. :: .:.: : .: : . : :.. ::
NP_071 PLLP--PH---MGGHY---RDCQSLGA---PPLD------GY-------PLPTPDTSPLD
200 210 220
300 310 320 330 340 350
pF1KB9 QYLPPNGHPGHVSSYSAAGYGLGSALAVASGHSAWISKPPGVALPTVSPPGVDAKAQVKT
: : .. :: . :. :... : .: : : ::. . ..
NP_071 GVDPD---P----AFFAAPMP-GDCPAAGTYSYAQVSDYAG---PP-EPPAGPMHPRLGP
230 240 250 260 270
360 370 380 390 400 410
pF1KB9 ETAGPQGPPHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYS---DHQPSGPYYGHS
: :::. : ::. .. : ... : :.. .:: ... .:.: ::
NP_071 EPAGPS-IPGLLAPPSALHVYYGAMGSPGAGGGRGFQMQPQHQHQHQHQHHPPGPGQPSP
280 290 300 310 320 330
420 430 440 450 460
pF1KB9 GQASGLYSAFSYMGPSQRPLYTAISDPSPSGPQSHSPTHWEQPVYTTLSRP
NP_071 PPEALPCRDGTDPSQPAELLGEVDRTEFEQYLHFVCKPEMGLPYQGHDSGVNLPDSHGAI
340 350 360 370 380 390
>>NP_008874 (OMIM: 601947) transcription factor SOX-12 [ (315 aa)
initn: 463 init1: 414 opt: 422 Z-score: 296.3 bits: 63.6 E(85289): 9.1e-10
Smith-Waterman score: 446; 33.2% identity (57.2% similar) in 271 aa overlap (103-369:39-285)
80 90 100 110 120 130
pF1KB9 REAVSQVLSGYDWTLVPMPVRVNGASKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNA
:.::::::::::.: :::. ::.: .:::
NP_008 AKRDGGPPPPGPGPAEEGAREPGWCKTPSGHIKRPMNAFMVWSQHERRKIMDQWPDMHNA
10 20 30 40 50 60
140 150 160 170 180 190
pF1KB9 ELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKAAQGEAECPG
:.:: ::. :.::..:.: ::..::::::..: :.:::::.::....: :... . ::
NP_008 EISKRLGRRWQLLQDSEKIPFVREAERLRLKHMADYPDYKYRPRKKSKGAPAKARPRPPG
70 80 90 100 110 120
200 210 220 230 240 250
pF1KB9 GEAEQGGTAAIQAHYKSAHLDHRHPGEGSPMSDGNPEHPSGQSHGPPTPPTTPKTELQSG
: .:: . .. . .: ::.:. . :.: .: . .: ::
NP_008 G---SGGGSRLKP---GPQL----PGRGGRRAAGGPL--GGGAAAPEDDDEDDDEELLEV
130 140 150 160 170
260 270 280 290 300 310
pF1KB9 KADPKRDGRSMGEGGKPHIDFGNVDIGEISHEVMSNMETFDVAELDQYLPPNGHPGHVSS
. . :: . . . : . :. . . : .: . : . . .
NP_008 RL-VETPGRELWR----MVPAGRAARGQAERAQGPSGEGAAAAAAASPTPSEDEEPEEEE
180 190 200 210 220 230
320 330 340 350 360
pF1KB9 YSAAGYGLGSALAVASGHSA--WISK-PPGVALPTVSPPGVDAKAQVKT-ETAGPQGPPH
::. : .::::. . ..:. ::: : :.: .: . . :.: :
NP_008 EEAAAAEEGEEETVASGEESLGFLSRLPPG-------PAGLDCSALDRDPDLQPPSGTSH
240 250 260 270 280
370 380 390 400 410 420
pF1KB9 YTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYSDHQPSGPYYGHSGQASGLYSAFSYM
.
NP_008 FEFPDYCTPEVTEMIAGDWRPSSIADLVFTY
290 300 310
>>NP_060889 (OMIM: 137940,601618,607823) transcription f (384 aa)
initn: 446 init1: 386 opt: 414 Z-score: 289.9 bits: 62.7 E(85289): 2.1e-09
Smith-Waterman score: 414; 45.5% identity (63.6% similar) in 154 aa overlap (104-254:85-228)
80 90 100 110 120 130
pF1KB9 EAVSQVLSGYDWTLVPMPVRVNGASKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAE
..::::::::::. :..::.: : ::::
NP_060 QRSPPRSPEPGRYGLSPAGRGERQAADESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAV
60 70 80 90 100 110
140 150 160 170 180 190
pF1KB9 LSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKAAQGEAE---C
::: ::: :. :: ..::::.:::::::.:: .:::.:::.:::.:... :.
NP_060 LSKMLGKAWKELNAAEKRPFVEEAERLRVQHLRDHPNYKYRPRRKKQARKARRLEPGLLL
120 130 140 150 160 170
200 210 220 230 240 250
pF1KB9 PGGEAEQGGTAAIQAHYKSAHLDHRHPGEGSPMSDGNPEHPSGQSHGPPTPPTTPKTELQ
:: : . : ::. .. : :. . :: : ::: .: :.
NP_060 PGLAPPQPPPEPFPAASGSARAFRELPPLGAEF-DG---------LGLPTPERSPLDGLE
180 190 200 210 220
260 270 280 290 300 310
pF1KB9 SGKADPKRDGRSMGEGGKPHIDFGNVDIGEISHEVMSNMETFDVAELDQYLPPNGHPGHV
:.:
NP_060 PGEAAFFPPPAAPEDCALRPFRAPYAPTELSRDPGGCYGAPLAEALRTAPPAAPLAGLYY
230 240 250 260 270 280
>>NP_003097 (OMIM: 184429,189960,206900) transcription f (317 aa)
initn: 544 init1: 396 opt: 412 Z-score: 289.7 bits: 62.4 E(85289): 2.1e-09
Smith-Waterman score: 457; 32.0% identity (58.4% similar) in 303 aa overlap (96-391:32-307)
70 80 90 100 110 120
pF1KB9 DKFPVCIREAVSQVLSGYDWTLVPMPVRVNGASKSKP-HVKRPMNAFMVWAQAARRKLAD
: .:..: .:::::::::::... :::.:.
NP_003 YNMMETELKPPGPQQTSGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQRRKMAQ
10 20 30 40 50 60
130 140 150 160 170 180
pF1KB9 QYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKAA
. :..::.:.:: :: :.::.:..:::::.::.::: : :.::::::.:::. .
NP_003 ENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMK
70 80 90 100 110 120
190 200 210 220 230 240
pF1KB9 QGEAECPGGEAEQGGTAAIQAHYKSAHLDHRHPGEGSPMSDGNPEHPSGQSHGPPTPPTT
. . ::: ::.. .. .: : : : . . : .: :.:
NP_003 KDKYTLPGGLLAPGGNSMASGVGVGAGL-----GAGVNQRMDSYAHMNGWSNGS------
130 140 150 160 170
250 260 270 280 290 300
pF1KB9 PKTELQSGKADPKRDGRSMGEGGKPHIDFGNVDIGEISHEVMSNMETFDVAELDQYLPPN
. .:. . :.. : . ..:. . :.. .... :.. .:. :
NP_003 -YSMMQDQLGYPQHPGLN-AHGAAQMQPMHRYDVSALQYNSMTSSQTY----------MN
180 190 200 210
310 320 330 340 350
pF1KB9 GHPGHVSSYS---AAGYGLGSALAVASGHSAWISKPPGVALPTVS-PP--GVDAKAQVKT
: : . ::: . :..::: .:...... :.:: :. . : : . : . ...
NP_003 GSPTYSMSYSQQGTPGMALGSMGSVVKSEAS--SSPPVVTSSSHSRAPCQAGDLRDMISM
220 230 240 250 260 270
360 370 380 390 400 410
pF1KB9 ETAGPQGPPHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYSDHQPSGPYYGHSGQA
: . : :: ... : : :.:
NP_003 YLPGAEVPE--PAAPSRLHMSQHYQSGPVPGTAINGTLPLSHM
280 290 300 310
420 430 440 450 460
pF1KB9 SGLYSAFSYMGPSQRPLYTAISDPSPSGPQSHSPTHWEQPVYTTLSRP
>>NP_009015 (OMIM: 604974) transcription factor SOX-21 [ (276 aa)
initn: 416 init1: 393 opt: 410 Z-score: 289.3 bits: 62.1 E(85289): 2.2e-09
Smith-Waterman score: 442; 34.2% identity (58.4% similar) in 281 aa overlap (100-368:2-268)
70 80 90 100 110 120
pF1KB9 VCIREAVSQVLSGYDWTLVPMPVRVNGASKSKP--HVKRPMNAFMVWAQAARRKLADQYP
::: ::::::::::::..: :::.:.. :
NP_009 MSKPVDHVKRPMNAFMVWSRAQRRKMAQENP
10 20 30
130 140 150 160 170 180
pF1KB9 HLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKAAQGE
..::.:.:: :: :.::.::.:::::.::.::: .: :.::::::.:::. . . .
NP_009 KMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTLLKKDK
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB9 AECPGGEAEQGGTAAIQAHYKSAHLDHRHPGEG-SPMSD-GNPEHPSGQSHGPPTPPTTP
: . : . : . :.. : : : : : .:::. .. . . . :
NP_009 FAFPVPYGLGGVADAEHPALKAGAGLHAGAGGGLVPESLLANPEKAAAAAAAAAARVFFP
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB9 KTELQSGKADPKRDGRSMGEGGKPHIDFGNVDIGEISHEVMSNMETFDVAELDQYLPPNG
.. .. : . . .:.: .. .:.: :. :. . : : : :
NP_009 QSAAAAAAAA------AAAAAGSP---YSLLDLGSKMAEISSSSSGLPYASSLGY-PTAG
160 170 180 190 200
310 320 330 340 350
pF1KB9 HPGHVSSYSAAGYGLGSALAVASGHSAWISKP--PGVALP---TVSP-PGVDAK-AQVKT
.... .:. . ..: :.:.::. .: :: .: .. : ::.. : .
NP_009 ----AGAFHGAAAAAAAAAAAAGGHTHSHPSPGNPGYMIPCNCSAWPSPGLQPPLAYILL
210 220 230 240 250
360 370 380 390 400 410
pF1KB9 ETAG-PQGPPHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYSDHQPSGPYYGHSGQ
: :: :.
NP_009 PGMGKPQLDPYPAAYAAAL
260 270
>>NP_008873 (OMIM: 601297) protein SOX-15 [Homo sapiens] (233 aa)
initn: 431 init1: 377 opt: 408 Z-score: 289.1 bits: 61.8 E(85289): 2.3e-09
Smith-Waterman score: 408; 41.8% identity (71.2% similar) in 153 aa overlap (104-248:49-196)
80 90 100 110 120 130
pF1KB9 EAVSQVLSGYDWTLVPMPVRVNGASKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAE
:::::::::::..: ::..:.: :..::.:
NP_008 ATAAASSSSGPQEREGAGSPAAPGTLPLEKVKRPMNAFMVWSSAQRRQMAQQNPKMHNSE
20 30 40 50 60 70
140 150 160 170 180 190
pF1KB9 LSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKAAQGEAECPGG
.:: :: :.::.:..::::.:::.::: .: .:.:::::.:::. ....: : ..: :
NP_008 ISKRLGAQWKLLDEDEKRPFVEEAKRLRARHLRDYPDYKYRPRRKAKSSGA-GPSRCGQG
80 90 100 110 120 130
200 210 220 230 240
pF1KB9 EAE--QGGT---AAIQAHYKSAHLDHRHPGEGSPMSDGNPEHPSGQSHGP---PTPPTTP
... .:: . . : . .: :. .. . :. :.:: :.: . :
NP_008 RGNLASGGPLWGPGYATTQPSRGFGYRPPSYSTAYLPGS----YGSSHCKLEAPSPCSLP
140 150 160 170 180 190
250 260 270 280 290 300
pF1KB9 KTELQSGKADPKRDGRSMGEGGKPHIDFGNVDIGEISHEVMSNMETFDVAELDQYLPPNG
...
NP_008 QSDPRLQGELLPTYTHYLPPGSPTPYNPPLAGAPMPLTHL
200 210 220 230
>>NP_005625 (OMIM: 300123,312000,313430) transcription f (446 aa)
initn: 434 init1: 377 opt: 407 Z-score: 284.3 bits: 61.9 E(85289): 4.2e-09
Smith-Waterman score: 430; 30.2% identity (55.9% similar) in 338 aa overlap (96-420:131-439)
70 80 90 100 110 120
pF1KB9 DKFPVCIREAVSQVLSGYDWTLVPMPVRVNGASKSKPHVKRPMNAFMVWAQAARRKLADQ
:.. .. .:::::::::::... :::.: .
NP_005 AAPGGAGKSSANAAGGANSGGGSSGGASGGGGGTDQDRVKRPMNAFMVWSRGQRRKMALE
110 120 130 140 150 160
130 140 150 160 170 180
pF1KB9 YPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKAAQ
:..::.:.:: :: :.::....:::::.::.::: : :..:::::.:::. . .
NP_005 NPKMHNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKK
170 180 190 200 210 220
190 200 210 220 230 240
pF1KB9 GEAECPGGEAEQGGTAAIQAHYKSAHLDHRHPGEGSPMSDGNPEHPSGQSHGPPTPPTTP
. :.: :..:: : .: : :. .. . : .: ..: .
NP_005 DKYSLPSGLLPPGAAAAAAAAAAAAAAASSPVGVGQRLD--TYTHVNGWANGAYS-----
230 240 250 260 270
250 260 270 280 290 300
pF1KB9 KTELQSGKADPKRDGRSMGEGGKPHIDFGNVDIGEISHEVMSNMETFDVAELDQYLP--P
.. : : :.: ::. : .. :. .:.: : :: : :
NP_005 LVQEQLGYAQPP----SMSSPPPP--------------PALPPMHRYDMAGL-QYSPMMP
280 290 300 310
310 320 330 340 350
pF1KB9 NGHPGHVSSYSAA----GYGLGSALAVASGHSAWISKPPGVALPTVSPPGVDAKAQ---V
: .... .:: ::: . :.:.. .:. ..: .: ... ... . :
NP_005 PGAQSYMNVAAAAAAASGYGGMAPSATAAAAAAYGQQPATAAAAAAAAAAMSLGPMGSVV
320 330 340 350 360 370
360 370 380 390 400 410
pF1KB9 KTETAGPQGPPHYTDQPSTSQIA----YTSLSLPHYGSAFPSISRPQFDYSDHQPSGPYY
:.: ..: :: ... . . .. . :. :: :.: . : : : :
NP_005 KSEPSSP--PPAIASHSQRACLGDLRDMISMYLPPGGDAADAAS-PLPGGRLHGVHQHYQ
380 390 400 410 420 430
420 430 440 450 460
pF1KB9 GHSGQASGLYSAFSYMGPSQRPLYTAISDPSPSGPQSHSPTHWEQPVYTTLSRP
: . ..:
NP_005 GAGTAVNGTVPLTHI
440
466 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 02:06:28 2016 done: Sat Nov 5 02:06:29 2016
Total Scan time: 10.400 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]