Result of FASTA (ccds) for
pF1KB9574
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9574, 380 aa
1>>>pF1KB9574 380 - 380 aa - 380 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.4890+/-0.000843; mu= 8.4443+/- 0.051
mean_var=150.2520+/-30.492, 0's: 0 Z-trim(112.8): 47 B-trim: 543 in 1/52
Lambda= 0.104632
statistics sampled from 13504 (13545) to 13504 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.759), E-opt: 0.2 (0.416), width: 16
Scan time: 2.750
The best scores are: opt bits E(32554)
CCDS9841.1 FOS gene_id:2353|Hs108|chr14 ( 380) 2507 389.7 2.3e-108
CCDS1766.1 FOSL2 gene_id:2355|Hs108|chr2 ( 326) 630 106.3 4e-23
CCDS12664.1 FOSB gene_id:2354|Hs108|chr19 ( 338) 484 84.3 1.8e-16
CCDS8121.1 FOSL1 gene_id:8061|Hs108|chr11 ( 271) 468 81.8 8e-16
>>CCDS9841.1 FOS gene_id:2353|Hs108|chr14 (380 aa)
initn: 2507 init1: 2507 opt: 2507 Z-score: 2058.9 bits: 389.7 E(32554): 2.3e-108
Smith-Waterman score: 2507; 100.0% identity (100.0% similar) in 380 aa overlap (1-380:1-380)
10 20 30 40 50 60
pF1KB9 MMFSGFNADYEASSSRCSSASPAGDSLSYYHSPADSFSSMGSPVNAQDFCTDLAVSSANF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 MMFSGFNADYEASSSRCSSASPAGDSLSYYHSPADSFSSMGSPVNAQDFCTDLAVSSANF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 IPTVTAISTSPDLQWLVQPALVSSVAPSQTRAPHPFGVPAPSAGAYSRAGVVKTMTGGRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 IPTVTAISTSPDLQWLVQPALVSSVAPSQTRAPHPFGVPAPSAGAYSRAGVVKTMTGGRA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 QSIGRRGKVEQLSPEEEEKRRIRRERNKMAAAKCRNRRRELTDTLQAETDQLEDEKSALQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 QSIGRRGKVEQLSPEEEEKRRIRRERNKMAAAKCRNRRRELTDTLQAETDQLEDEKSALQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 TEIANLLKEKEKLEFILAAHRPACKIPDDLGFPEEMSVASLDLTGGLPEVATPESEEAFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 TEIANLLKEKEKLEFILAAHRPACKIPDDLGFPEEMSVASLDLTGGLPEVATPESEEAFT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 LPLLNDPEPKPSVEPVKSISSMELKTEPFDDFLFPASSRPSGSETARSVPDMDLSGSFYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 LPLLNDPEPKPSVEPVKSISSMELKTEPFDDFLFPASSRPSGSETARSVPDMDLSGSFYA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 ADWEPLHSGSLGMGPMATELEPLCTPVVTCTPSCTAYTSSFVFTYPEADSFPSCAAAHRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 ADWEPLHSGSLGMGPMATELEPLCTPVVTCTPSCTAYTSSFVFTYPEADSFPSCAAAHRK
310 320 330 340 350 360
370 380
pF1KB9 GSSSNEPSSDSLSSPTLLAL
::::::::::::::::::::
CCDS98 GSSSNEPSSDSLSSPTLLAL
370 380
>>CCDS1766.1 FOSL2 gene_id:2355|Hs108|chr2 (326 aa)
initn: 703 init1: 560 opt: 630 Z-score: 528.6 bits: 106.3 E(32554): 4e-23
Smith-Waterman score: 817; 43.4% identity (65.4% similar) in 396 aa overlap (2-380:1-326)
10 20 30 40 50 60
pF1KB9 MMFSGFNADYEASSSRCSSASPAGDSLSYYHSPADSFSSMGSPVNAQDFCTDLAVSSANF
:.. . .... .::: ::.::: : :.:.:: :. . : : .:. :.. :
CCDS17 MYQDYPGNFD-TSSRGSSGSPA-------H--AESYSSGGG--GQQKFRVDMPGSGSAF
10 20 30 40
70 80 90 100 110
pF1KB9 IPTVTAISTSPDLQWLVQPALVSSVAPSQTRAPHPFG-VPA----PSAGAYSRAGVVKTM
:::..::.:: ::::.:::....:.. :. ::.. .:. :. : : ::.::.
CCDS17 IPTINAITTSQDLQWMVQPTVITSMSNPYPRS-HPYSPLPGLASVPGHMALPRPGVIKTI
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB9 TGGRAQSIGRRGKVEQLSPEEEEKRRIRRERNKMAAAKCRNRRRELTDTLQAETDQLEDE
. ..::: . :::::::::::::::::::.:::::::::::::. :::::..::.:
CCDS17 ----GTTVGRRRRDEQLSPEEEEKRRIRRERNKLAAAKCRNRRRELTEKLQAETEELEEE
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB9 KSALQTEIANLLKEKEKLEFILAAHRPACKIPDDLGFPEEMSVASLDLTGGLPEVATPES
::.:: :::.: ::::::::.:.:: :.::: ::: .:
CCDS17 KSGLQKEIAELQKEKEKLEFMLVAHGPVCKIS-----PEERR--------------SP--
170 180 190 200
240 250 260 270 280 290
pF1KB9 EEAFTLPLLNDPEPKPSVEPVKS----ISSMELKTEPFDDFLFPASSRPSGSETARSV-P
: :...:..: .... .: ::... :.:: . ... :::
CCDS17 -------------PAPGLQPMRSGGGSVGAVVVKQEPLEE-DSPSSSSAGLDKAQRSVIK
210 220 230 240
300 310 320 330 340
pF1KB9 DMDLSGSFYAADWEPLHSGSLGMGPMATELEPLCTPVVTCTPSCTAYTSSFVFTYP----
....:.::. ::::. :. ::: ::. : ::..:::::
CCDS17 PISIAGGFYGE--EPLHT------PI----------VVTSTPAVTPGTSNLVFTYPSVLE
250 260 270 280
350 360 370 380
pF1KB9 -EADSFPS--CAAAHRKGSSSNEPSSDSLSSPTLLAL
:. . :: :. :::..:::.. :::::.:::::::
CCDS17 QESPASPSESCSKAHRRSSSSGDQSSDSLNSPTLLAL
290 300 310 320
>>CCDS12664.1 FOSB gene_id:2354|Hs108|chr19 (338 aa)
initn: 711 init1: 440 opt: 484 Z-score: 409.2 bits: 84.3 E(32554): 1.8e-16
Smith-Waterman score: 762; 42.8% identity (64.4% similar) in 404 aa overlap (2-380:1-338)
10 20 30 40 50 60
pF1KB9 MMFSGFNADYEASSSRCSSASPAGDSLSYYHSPADSFSSMGSPVNAQDFCTDLAVSSANF
::..: .::. :.::::: ::... : : : .:::.: . . .:. :. :. ..:
CCDS12 MFQAFPGDYD-SGSRCSS-SPSAE--SQYLSSVDSFGSPPTAAASQE-CAGLGEMPGSF
10 20 30 40 50
70 80 90 100
pF1KB9 IPTVTAISTSPDLQWLVQPALVSSVAPSQ-----TRAP--HPFGVPA-----PSAGAYSR
.::::::.:: ::::::::.:.::.: :: .. : :. .:. :. ..::
CCDS12 VPTVTAITTSQDLQWLVQPTLISSMAQSQGQPLASQPPVVDPYDMPGTSYSTPGMSGYSS
60 70 80 90 100 110
110 120 130 140 150
pF1KB9 AGVVKT---MTGGRAQSIG---------RRGKVEQLSPEEEEKRRIRRERNKMAAAKCRN
.:. . :.: ... : :: . : :.::::::::.::::::.:::::::
CCDS12 GGASGSGGPSTSGTTSGPGPARPARARPRRPREETLTPEEEEKRRVRRERNKLAAAKCRN
120 130 140 150 160 170
160 170 180 190 200 210
pF1KB9 RRRELTDTLQAETDQLEDEKSALQTEIANLLKEKEKLEFILAAHRPACKIPDDLGFPEEM
::::::: :::::::::.::. :..:::.: ::::.:::.:.::.:.:::: . : :
CCDS12 RRRELTDRLQAETDQLEEEKAELESEIAELQKEKERLEFVLVAHKPGCKIPYEEG-PGPG
180 190 200 210 220 230
220 230 240 250 260 270
pF1KB9 SVASL-DLTGGLPEVATPESEEAFTLPLLNDPEPKPSVEPVKSISSMELKTEPFDDFLFP
.: . :: : ..: .:..:. :: : : : ::
CCDS12 PLAEVRDLPG-----SAPAKEDGFSW-LLPPPPPPPL---------------PF------
240 250 260
280 290 300 310 320 330
pF1KB9 ASSRPSGSETARSVPDMDLSGSFYAADWEPLHSGSLGMGPMATELEPLCTPVVTCTPSCT
.:....: .:..:... :: .: .:. :::. ::
CCDS12 --------QTSQDAPP-NLTASLFT------HSEVQVLG------DPF--PVVN--PS--
270 280 290
340 350 360 370 380
pF1KB9 AYTSSFVFTYPEADSFPSCAAAHRKGSSSNEPSSDSLSSPTLLAL
::::::.: ::...: :.:.: :.:..:: : :.::.::::
CCDS12 -YTSSFVLTCPEVSAF---AGAQRT-SGSDQPS-DPLNSPSLLAL
300 310 320 330
>>CCDS8121.1 FOSL1 gene_id:8061|Hs108|chr11 (271 aa)
initn: 677 init1: 422 opt: 468 Z-score: 397.5 bits: 81.8 E(32554): 8e-16
Smith-Waterman score: 603; 41.7% identity (57.7% similar) in 324 aa overlap (59-380:36-271)
30 40 50 60 70 80
pF1KB9 YYHSPADSFSSMGSPVNAQDFCTDLAVSSANFIPTVTAISTSPDLQWLVQPALVSSVAPS
...:.....: : .:::.::: ... ::
CCDS81 GEPGPSSGNGGGYGGPAQPPAAAQAAQQKFHLVPSINTMSGSQELQWMVQPHFLG---PS
10 20 30 40 50 60
90 100 110 120 130 140
pF1KB9 QTRAPHPFGVPAPSAGAYSRAGVVKTMTGGRAQSIGRRGKVEQLSPEEEEKRRIRRERNK
. :.:. : : : ::.... : .. :: ::.::::::.::.::::::
CCDS81 SY--PRPLTYPQYSP-PQPRPGVIRAL--GPPPGV-RRRPCEQISPEEEERRRVRRERNK
70 80 90 100 110
150 160 170 180 190 200
pF1KB9 MAAAKCRNRRRELTDTLQAETDQLEDEKSALQTEIANLLKEKEKLEFILAAHRPACKIPD
.:::::::::.:::: ::::::.::::::.:: :: .: :.::.::..: :::: ::::.
CCDS81 LAAAKCRNRRKELTDFLQAETDKLEDEKSGLQREIEELQKQKERLELVLEAHRPICKIPE
120 130 140 150 160 170
210 220 230 240 250 260
pF1KB9 DLGFPEEMSVASLDLTGGLPEVATPESEEAFTLPLLNDPEPKPSVEPVKSISSMELKTEP
:. ::. ...:
CCDS81 G---------AKEGDTGSTSGTSSP-----------------------------------
180 190
270 280 290 300 310 320
pF1KB9 FDDFLFPASSRPSGSETARSVPDMDLSGSFYAADWEPLHSGSLGMGPMATELEPLCTPVV
:: :: :: ..:: : ::. : : : ::..
CCDS81 ------PAPCRP--------VPCISLS---------P--------GPV-LEPEALHTPTL
200 210 220
330 340 350 360 370 380
pF1KB9 TCTPSCTAYTSSFVFTYPEADSFPS-CAAAHRKGSSSN-EPSSDSLSSPTLLAL
::: : .: :.::::: : : ::.::::.:::. .:::: :.:::::::
CCDS81 MTTPSLTPFTPSLVFTYP---STPEPCASAHRKSSSSSGDPSSDPLGSPTLLAL
230 240 250 260 270
380 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 00:15:31 2016 done: Fri Nov 4 00:15:32 2016
Total Scan time: 2.750 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]