Result of FASTA (omim) for
pF1KB9627
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9627, 382 aa
1>>>pF1KB9627 382 - 382 aa - 382 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.1103+/-0.000337; mu= 4.2164+/- 0.021
mean_var=301.2104+/-60.330, 0's: 0 Z-trim(125.3): 37 B-trim: 2702 in 2/58
Lambda= 0.073899
statistics sampled from 48569 (48608) to 48569 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.835), E-opt: 0.2 (0.57), width: 16
Scan time: 8.090
The best scores are: opt bits E(85289)
NP_006151 (OMIM: 601725) neurogenic differentiatio ( 382) 2634 293.4 5.9e-79
NP_002491 (OMIM: 125853,601724,606394) neurogenic ( 356) 1092 129.0 1.7e-29
NP_073565 (OMIM: 611513) neurogenic differentiatio ( 337) 788 96.5 9.6e-20
NP_067014 (OMIM: 611635) neurogenic differentiatio ( 331) 653 82.1 2e-15
NP_076924 (OMIM: 606624) neurogenin-2 [Homo sapien ( 272) 295 43.9 0.00055
NP_006152 (OMIM: 601726) neurogenin-1 [Homo sapien ( 237) 286 42.8 0.00098
XP_016871769 (OMIM: 604882,610370) PREDICTED: neur ( 214) 285 42.7 0.00099
NP_066279 (OMIM: 604882,610370) neurogenin-3 [Homo ( 214) 285 42.7 0.00099
XP_005260965 (OMIM: 606386) PREDICTED: oligodendro ( 323) 275 41.8 0.0027
NP_005797 (OMIM: 606386) oligodendrocyte transcrip ( 323) 275 41.8 0.0027
>>NP_006151 (OMIM: 601725) neurogenic differentiation fa (382 aa)
initn: 2634 init1: 2634 opt: 2634 Z-score: 1538.4 bits: 293.4 E(85289): 5.9e-79
Smith-Waterman score: 2634; 100.0% identity (100.0% similar) in 382 aa overlap (1-382:1-382)
10 20 30 40 50 60
pF1KB9 MLTRLFSEPGLLSDVPKFASWGDGEDDEPRSDKGDAPPPPPPAPGPGAPGPARAAKPVPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MLTRLFSEPGLLSDVPKFASWGDGEDDEPRSDKGDAPPPPPPAPGPGAPGPARAAKPVPL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 RGEEGTEATLAEVKEEGELGGEEEEEEEEEEGLDEAEGERPKKRGPKKRKMTKARLERSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 RGEEGTEATLAEVKEEGELGGEEEEEEEEEEGLDEAEGERPKKRGPKKRKMTKARLERSK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KRPDLVSYVQTLCKGLSQPTTNLVAGCLQLNSRNFLTEQGADGAGRFHGSGGPFAMHPYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 KRPDLVSYVQTLCKGLSQPTTNLVAGCLQLNSRNFLTEQGADGAGRFHGSGGPFAMHPYP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 YPCSRLAGAQCQAAGGLGGGAAHALRTHGYCAAYETLYAAAGGGGASPDYNSSEYEGPLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 YPCSRLAGAQCQAAGGLGGGAAHALRTHGYCAAYETLYAAAGGGGASPDYNSSEYEGPLS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 PPLCLNGNFSLKQDSSPDHEKSYHYSMHYSALPGSRPTGHGLVFGSSAVRGGVHSENLLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 PPLCLNGNFSLKQDSSPDHEKSYHYSMHYSALPGSRPTGHGLVFGSSAVRGGVHSENLLS
310 320 330 340 350 360
370 380
pF1KB9 YDMHLHHDRGPMYEELNAFFHN
::::::::::::::::::::::
NP_006 YDMHLHHDRGPMYEELNAFFHN
370 380
>>NP_002491 (OMIM: 125853,601724,606394) neurogenic diff (356 aa)
initn: 1075 init1: 811 opt: 1092 Z-score: 650.3 bits: 129.0 E(85289): 1.7e-29
Smith-Waterman score: 1092; 51.5% identity (69.5% similar) in 361 aa overlap (31-382:6-356)
10 20 30 40 50 60
pF1KB9 MLTRLFSEPGLLSDVPKFASWGDGEDDEPRSDKGDAPPPPPPAPGPGAPGPARAAKPVPL
:..: : : .: :. ...
NP_002 MTKSYSESGLMGEPQPQGP-PSWTDECLSSQDEEH
10 20 30
70 80 90 100 110
pF1KB9 RGEEGTEATLAEVKEEGEL--GGEEEEE----EEEEEGLDEAEGERPKKRGPKKRKMTKA
.... . : :: : :::::.: ::::: .: . ..::.:::::.:::::
NP_002 EADKKEDDLEAMNAEEDSLRNGGEEEDEDEDLEEEEEEEEEDDDQKPKRRGPKKKKMTKA
40 50 60 70 80 90
120 130 140 150 160 170
pF1KB9 RLERSKLRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALS
:::: ::::.::::::::::: ::::::::::::::::::::::::::::::::::::::
NP_002 RLERFKLRRMKANARERNRMHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALS
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB9 EILRSGKRPDLVSYVQTLCKGLSQPTTNLVAGCLQLNSRNFLTEQGADGAGRFHGSGGPF
::::::: :::::.::::::::::::::::::::::: :.:: ::. : .. ... :
NP_002 EILRSGKSPDLVSFVQTLCKGLSQPTTNLVAGCLQLNPRTFLPEQNQDMPPHLPTASASF
160 170 180 190 200 210
240 250 260 270 280 290
pF1KB9 AMHPYPYPCSRLAGAQCQAAGGLGGGAAHALRT--HGYCAAYETLYAAAGGGGASPDYNS
.::: : : : . .. . .. :.: :: : .. . .::.
NP_002 PVHPYSYQSP---GLPSPPYGTMDSSHVFHVKPPPHAYSAALEPFFESPLTDCTSPS---
220 230 240 250 260
300 310 320 330 340 350
pF1KB9 SEYEGPLSPPLCLNGNFSLKQDSSPDHEKSYHYSMHYSALPGSRPTGHGLVF-GSSAVRG
..::::::: .:::::.:.. : . ::.: ..::: : . .:: .: :..: :
NP_002 --FDGPLSPPLSINGNFSFKHEPSAEFEKNYAFTMHYPAATLAGAQSHGSIFSGTAAPRC
270 280 290 300 310 320
360 370 380
pF1KB9 GVHSENLLSYDMHLHHDRGPMYEELNAFFHN
. .:..:.: : ::.: : .:::.::.
NP_002 EIPIDNIMSFDSHSHHER-VMSAQLNAIFHD
330 340 350
>>NP_073565 (OMIM: 611513) neurogenic differentiation fa (337 aa)
initn: 1037 init1: 696 opt: 788 Z-score: 475.4 bits: 96.5 E(85289): 9.6e-20
Smith-Waterman score: 1014; 52.0% identity (72.4% similar) in 333 aa overlap (51-382:34-337)
30 40 50 60 70 80
pF1KB9 WGDGEDDEPRSDKGDAPPPPPPAPGPGAPGPARAAKPVPLRGEEGTEATLAEVKEEGELG
: .: . :::. .: :...: :
NP_073 LPFDESVVMPESQMCRKFSRECEDQKQIKKPESFSKQIVLRGKSIKRAPGEETEKEEE--
10 20 30 40 50 60
90 100 110 120 130 140
pF1KB9 GEEEEEEEEEEGLDEAEGERPKKRGPKKRKMTKARLERSKLRRQKANARERNRMHDLNAA
::..:::.:.:: :..:: .:.: :: :::: :.:::.:::::::::: :: :
NP_073 -EEDREEEDENGL-------PRRRGLRKKKTTKLRLERVKFRRQEANARERNRMHGLNDA
70 80 90 100 110
150 160 170 180 190 200
pF1KB9 LDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKRPDLVSYVQTLCKGLSQPT
:::::::::::::::::::::::::::::::::::::: ::::::...::.:::::::::
NP_073 LDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRIGKRPDLLTFVQNLCKGLSQPT
120 130 140 150 160 170
210 220 230 240 250 260
pF1KB9 TNLVAGCLQLNSRNFLTEQGADGAGRFHGSGGPFAMHPYPYPCSRLAGAQCQAAGGLGGG
:::::::::::.:.:: ::...: : . .:.. :: .:. . : : .
NP_073 TNLVAGCLQLNARSFLMGQGGEAA---HHTRSPYSTFYPPYHSPELTTP--PGHGTLDN-
180 190 200 210 220
270 280 290 300 310
pF1KB9 AAHALRTHGYCAAYETLYAAAGGGGASPDYNSSEYEGPLSPP-LCLNGNFSLKQDSSPDH
..... ..::.:::..: .. ::. : ..::::::: . :: :::::. . :.
NP_073 -SKSMKPYNYCSAYESFYEST-----SPECASPQFEGPLSPPPINYNGIFSLKQEETLDY
230 240 250 260 270 280
320 330 340 350 360 370
pF1KB9 EKSYHYSMHYSALPGSRPTGHGLVFGSSAVRGGVHSENLLSYDMHLHHDRGPMYEELNAF
:.:.:.::: :.: : :.: .: : . ... . ::.::. . : .::::
NP_073 GKNYNYGMHYCAVPPRGPLGQGAMF-----R--LPTDSHFPYDLHLRSQSLTMQDELNAV
290 300 310 320 330
380
pF1KB9 FHN
:::
NP_073 FHN
>>NP_067014 (OMIM: 611635) neurogenic differentiation fa (331 aa)
initn: 924 init1: 642 opt: 653 Z-score: 397.7 bits: 82.1 E(85289): 2e-15
Smith-Waterman score: 849; 48.4% identity (67.4% similar) in 316 aa overlap (65-380:39-329)
40 50 60 70 80 90
pF1KB9 DAPPPPPPAPGPGAPGPARAAKPVPLRGEEGTEATLAEVKEEGELGGEEEEEEEEEEGLD
:: . :. . :: . . ::::::::.:
NP_067 KEMGELVNTPSWMDKGLGSQNEVKEEESRPGTYGMLSSLTEEHD--SIEEEEEEEEDG--
10 20 30 40 50 60
100 110 120 130 140 150
pF1KB9 EAEGERPKKRGPKKRKMTKARLERSKLRRQKANARERNRMHDLNAALDNLRKVVPCYSKT
:.::.:::::.::::::::: . :: :::::::.::: :: ::::::.:.::::::
NP_067 ----EKPKRRGPKKKKMTKARLERFRARRVKANARERTRMHGLNDALDNLRRVMPCYSKT
70 80 90 100 110 120
160 170 180 190 200 210
pF1KB9 QKLSKIETLRLAKNYIWALSEILRSGKRPDLVSYVQTLCKGLSQPTTNLVAGCLQLNSRN
::::::::::::.::::::::.:..:. :. ..:. :::::::::.:::::::::. ..
NP_067 QKLSKIETLRLARNYIWALSEVLETGQTPEGKGFVEMLCKGLSQPTSNLVAGCLQLGPQS
130 140 150 160 170 180
220 230 240 250 260 270
pF1KB9 FLTEQGADGAGRFHGSGGPFAMHPYPYPCSRLAGAQCQAAGGLGGGAAHALRTHGYCAAY
: :. : . . ...: . : : . : .: : : ..
NP_067 VLLEKHED---KSPICDSAISVHNFNYQSPGLPSPP------YGHMETHLL--HLKPQVF
190 200 210 220
280 290 300 310 320 330
pF1KB9 ETLYAAAGGGGASPDYNSSEYEGPLSPPLCLNGNFSLKQDSSPDHEKSYHYSMHYSALPG
..: . .. :. :: .. :::::.::: ..::::::::.::: :::: . :: .
NP_067 KSL-GESSFGSHLPDCSTPPYEGPLTPPLSISGNFSLKQDGSPDLEKSYSFMPHYPSSSL
230 240 250 260 270 280
340 350 360 370 380
pF1KB9 SRPTGHGLVFGSSAVRGGVHSENLLSYDMHLHHDRGPMYEELNAFFHN
: :. : ... : : . .::: . :: : .::. :
NP_067 SSGHVHSTPFQAGTPRYDVPID--MSYDSYPHHGIGT---QLNTVFTE
290 300 310 320 330
>>NP_076924 (OMIM: 606624) neurogenin-2 [Homo sapiens] (272 aa)
initn: 351 init1: 268 opt: 295 Z-score: 192.5 bits: 43.9 E(85289): 0.00055
Smith-Waterman score: 295; 44.4% identity (64.4% similar) in 135 aa overlap (46-178:45-169)
20 30 40 50 60 70
pF1KB9 PKFASWGDGEDDEPRSDKGDAPPPPPPAPGPGAPGPARAAKPVPLRGEEGTEATLAEVKE
::: : :: :: :. ... .
NP_076 DVLVLLGSASPALAALTPLSSSADEEEEEEPGASGGARRQ-----RGAEAGQGARG----
20 30 40 50 60
80 90 100 110 120 130
pF1KB9 EGELGGEEEEEEEEEEGLDEAEGERPKK-RGPKKRKMTKARLER-SKLRRQKANARERNR
: .: : . . :: . .::.. :. .. : ..: .: :: ::: :::::
NP_076 -GVAAGAEGCRPARLLGLVHDCKRRPSRARAVSRGAKTAETVQRIKKTRRLKANNRERNR
70 80 90 100 110 120
140 150 160 170 180 190
pF1KB9 MHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKRPDLVSYVQTLC
::.:::::: ::.:.: . . ::.::::::.:.::::::.: ::
NP_076 MHNLNAALDALREVLPTFPEDAKLTKIETLRFAHNYIWALTETLRLADHCGGGGGGLPGA
130 140 150 160 170 180
200 210 220 230 240 250
pF1KB9 KGLSQPTTNLVAGCLQLNSRNFLTEQGADGAGRFHGSGGPFAMHPYPYPCSRLAGAQCQA
NP_076 LFSEAVLLSPGGASAALSSSGDSPSPASTWSCTNSPAPSSSVSSNSTSPYSCTLSPASPA
190 200 210 220 230 240
>>NP_006152 (OMIM: 601726) neurogenin-1 [Homo sapiens] (237 aa)
initn: 341 init1: 280 opt: 286 Z-score: 188.0 bits: 42.8 E(85289): 0.00098
Smith-Waterman score: 286; 54.9% identity (72.5% similar) in 91 aa overlap (89-178:60-149)
60 70 80 90 100 110
pF1KB9 PLRGEEGTEATLAEVKEEGELGGEEEEEEEEEEGLDEAEGERPKKRGPKKRKMTKARLER
: : .. : :: ..:: . : ..: :.
NP_006 EDCARLQQAASASGPPAPARRGAPNISRASEVPGAQDDEQERRRRRG-RTRVRSEALLHS
30 40 50 60 70 80
120 130 140 150 160 170
pF1KB9 -SKLRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEIL
. :: ::: :::::::.:::::: ::.:.: . ::.::::::.: ::::::.: :
NP_006 LRRSRRVKANDRERNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNYIWALAETL
90 100 110 120 130 140
180 190 200 210 220 230
pF1KB9 RSGKRPDLVSYVQTLCKGLSQPTTNLVAGCLQLNSRNFLTEQGADGAGRFHGSGGPFAMH
:
NP_006 RLADQGLPGGGARERLLPPQCVPCLPGPPSPASDAESWGSGAAAASPLSDPSSPAASEDF
150 160 170 180 190 200
>>XP_016871769 (OMIM: 604882,610370) PREDICTED: neurogen (214 aa)
initn: 254 init1: 254 opt: 285 Z-score: 188.0 bits: 42.7 E(85289): 0.00099
Smith-Waterman score: 285; 38.6% identity (60.7% similar) in 140 aa overlap (40-178:3-140)
10 20 30 40 50 60
pF1KB9 GLLSDVPKFASWGDGEDDEPRSDKGDAPPPPPPAPGPGAPGPARAAKPVPLRGEEGTEAT
: :. .: . .. . : .:. :.:
XP_016 MTPQPSGAPTVQVTRETERSFPRASED--EVT
10 20 30
70 80 90 100 110 120
pF1KB9 LAEVKEEGELGGEEEEEEEEEEGLDEAEGERPKKRGPKKRKMTKARLERSKL-RRQKANA
. . . : :: : : . .:: ..: .. : ... ::.:::
XP_016 CPTSAPPSPTRTRGNCAEAEEGGCRGAPRKLRARRGGRSRPKSELALSKQRRSRRKKAND
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB9 RERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKRPDLVSY
:::::::.::.::: :: :.: . ::.::::::.:.::::::.. ::
XP_016 RERNRMHNLNSALDALRGVLPTFPDDAKLTKIETLRFAHNYIWALTQTLRIADHSLYALE
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB9 VQTLCKGLSQPTTNLVAGCLQLNSRNFLTEQGADGAGRFHGSGGPFAMHPYPYPCSRLAG
XP_016 PPAPHCGELGSPGGSPGDWGSLYSPVSQAGSLSPAASLEERPGLLGATFSACLSPGSLAF
160 170 180 190 200 210
>>NP_066279 (OMIM: 604882,610370) neurogenin-3 [Homo sap (214 aa)
initn: 254 init1: 254 opt: 285 Z-score: 188.0 bits: 42.7 E(85289): 0.00099
Smith-Waterman score: 285; 38.6% identity (60.7% similar) in 140 aa overlap (40-178:3-140)
10 20 30 40 50 60
pF1KB9 GLLSDVPKFASWGDGEDDEPRSDKGDAPPPPPPAPGPGAPGPARAAKPVPLRGEEGTEAT
: :. .: . .. . : .:. :.:
NP_066 MTPQPSGAPTVQVTRETERSFPRASED--EVT
10 20 30
70 80 90 100 110 120
pF1KB9 LAEVKEEGELGGEEEEEEEEEEGLDEAEGERPKKRGPKKRKMTKARLERSKL-RRQKANA
. . . : :: : : . .:: ..: .. : ... ::.:::
NP_066 CPTSAPPSPTRTRGNCAEAEEGGCRGAPRKLRARRGGRSRPKSELALSKQRRSRRKKAND
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB9 RERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKRPDLVSY
:::::::.::.::: :: :.: . ::.::::::.:.::::::.. ::
NP_066 RERNRMHNLNSALDALRGVLPTFPDDAKLTKIETLRFAHNYIWALTQTLRIADHSLYALE
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB9 VQTLCKGLSQPTTNLVAGCLQLNSRNFLTEQGADGAGRFHGSGGPFAMHPYPYPCSRLAG
NP_066 PPAPHCGELGSPGGSPGDWGSLYSPVSQAGSLSPAASLEERPGLLGATFSACLSPGSLAF
160 170 180 190 200 210
>>XP_005260965 (OMIM: 606386) PREDICTED: oligodendrocyte (323 aa)
initn: 246 init1: 126 opt: 275 Z-score: 180.1 bits: 41.8 E(85289): 0.0027
Smith-Waterman score: 275; 31.4% identity (52.3% similar) in 287 aa overlap (60-333:55-316)
30 40 50 60 70 80
pF1KB9 RSDKGDAPPPPPPAPGPGAPGPARAAKPVPLRGEEGTEATLAEVKEEGELGGEEEEEEEE
::: :. .. : : .: .
XP_005 RSKGSSGSAFTGGTVSSSTPSDCPPELSAELRGAMGSAGAHPGDKLGG--SGFKSSSSST
30 40 50 60 70 80
90 100 110 120 130 140
pF1KB9 EEGLDEAEGERPKKRGPKKRKMTKARLERSKLRRQKANARERNRMHDLNAALDNLRKVVP
. . : . :: :..::. .:.. .: : :.:::.:::::: :.:.::.:.:
XP_005 SSSTSSAAASSTKK---DKKQMTEPELQQLRL---KINSRERKRMHDLNIAMDGLREVMP
90 100 110 120 130
150 160 170 180 190 200
pF1KB9 CYSK---TQKLSKIETLRLAKNYIWALSEILRSGKRPDLVSYVQTLCKGLSQPTTNLVAG
:.. ..::::: :: ::.::: :.. :. :: ::: . .. .:..
XP_005 -YAHGPSVRKLSKIATLLLARNYILMLTNSLEEMKR--LVSEIYGGHHAGFHPSA-----
140 150 160 170 180
210 220 230 240 250
pF1KB9 CLQLNSRNFLTEQGADGAGRFHGSGGPFAMHPYPYPCSRLAGAQCQAAG-------GLGG
: : : : :. :.. : . :: : . :.: ::. : :
XP_005 CGGLAHSAPLPAATAHPAAAAHAAHHPAVHHPILPPAAAAAAAAAAAAAVSSASLPGSGL
190 200 210 220 230 240
260 270 280 290 300 310
pF1KB9 GAAHALRT-HGYCAAYETLYAA--AGGGGASPDYNSSEYEGPLSPPLCLNGNFSLKQDSS
.. ..: :: . . :: .::::.: .. .. : . : : :. :
XP_005 PSVGSIRPPHGLLKSPSAAAAAPLGGGGGGSGASGGFQHWGGMPCP-C-----SMCQVPP
250 260 270 280 290 300
320 330 340 350 360 370
pF1KB9 PDHEKSYHYSMHYSALPGSRPTGHGLVFGSSAVRGGVHSENLLSYDMHLHHDRGPMYEEL
: :. : .: ..::
XP_005 PHHHVS---AMGAGSLPRLTSDAK
310 320
>>NP_005797 (OMIM: 606386) oligodendrocyte transcription (323 aa)
initn: 246 init1: 126 opt: 275 Z-score: 180.1 bits: 41.8 E(85289): 0.0027
Smith-Waterman score: 275; 31.4% identity (52.3% similar) in 287 aa overlap (60-333:55-316)
30 40 50 60 70 80
pF1KB9 RSDKGDAPPPPPPAPGPGAPGPARAAKPVPLRGEEGTEATLAEVKEEGELGGEEEEEEEE
::: :. .. : : .: .
NP_005 RSKGSSGSAFTGGTVSSSTPSDCPPELSAELRGAMGSAGAHPGDKLGG--SGFKSSSSST
30 40 50 60 70 80
90 100 110 120 130 140
pF1KB9 EEGLDEAEGERPKKRGPKKRKMTKARLERSKLRRQKANARERNRMHDLNAALDNLRKVVP
. . : . :: :..::. .:.. .: : :.:::.:::::: :.:.::.:.:
NP_005 SSSTSSAAASSTKK---DKKQMTEPELQQLRL---KINSRERKRMHDLNIAMDGLREVMP
90 100 110 120 130
150 160 170 180 190 200
pF1KB9 CYSK---TQKLSKIETLRLAKNYIWALSEILRSGKRPDLVSYVQTLCKGLSQPTTNLVAG
:.. ..::::: :: ::.::: :.. :. :: ::: . .. .:..
NP_005 -YAHGPSVRKLSKIATLLLARNYILMLTNSLEEMKR--LVSEIYGGHHAGFHPSA-----
140 150 160 170 180
210 220 230 240 250
pF1KB9 CLQLNSRNFLTEQGADGAGRFHGSGGPFAMHPYPYPCSRLAGAQCQAAG-------GLGG
: : : : :. :.. : . :: : . :.: ::. : :
NP_005 CGGLAHSAPLPAATAHPAAAAHAAHHPAVHHPILPPAAAAAAAAAAAAAVSSASLPGSGL
190 200 210 220 230 240
260 270 280 290 300 310
pF1KB9 GAAHALRT-HGYCAAYETLYAA--AGGGGASPDYNSSEYEGPLSPPLCLNGNFSLKQDSS
.. ..: :: . . :: .::::.: .. .. : . : : :. :
NP_005 PSVGSIRPPHGLLKSPSAAAAAPLGGGGGGSGASGGFQHWGGMPCP-C-----SMCQVPP
250 260 270 280 290 300
320 330 340 350 360 370
pF1KB9 PDHEKSYHYSMHYSALPGSRPTGHGLVFGSSAVRGGVHSENLLSYDMHLHHDRGPMYEEL
: :. : .: ..::
NP_005 PHHHVS---AMGAGSLPRLTSDAK
310 320
382 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 17:48:05 2016 done: Fri Nov 4 17:48:06 2016
Total Scan time: 8.090 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]