Result of FASTA (ccds) for
pF1KB9651
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9651, 240 aa
1>>>pF1KB9651 240 - 240 aa - 240 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.9211+/-0.000726; mu= 8.2371+/- 0.044
mean_var=120.5606+/-24.876, 0's: 0 Z-trim(113.2): 67 B-trim: 0 in 0/50
Lambda= 0.116808
statistics sampled from 13817 (13884) to 13817 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.792), E-opt: 0.2 (0.426), width: 16
Scan time: 2.560
The best scores are: opt bits E(32554)
CCDS3094.1 SOX14 gene_id:8403|Hs108|chr3 ( 240) 1655 289.0 1.9e-78
CCDS9473.1 SOX21 gene_id:11166|Hs108|chr13 ( 276) 664 122.0 4e-28
CCDS3239.1 SOX2 gene_id:6657|Hs108|chr3 ( 317) 601 111.5 7e-25
CCDS9523.1 SOX1 gene_id:6656|Hs108|chr13 ( 391) 602 111.7 7.4e-25
CCDS14669.1 SOX3 gene_id:6658|Hs108|chrX ( 446) 555 103.8 2e-22
CCDS32549.1 SOX15 gene_id:6665|Hs108|chr17 ( 233) 474 90.0 1.5e-18
CCDS6159.1 SOX17 gene_id:64321|Hs108|chr8 ( 414) 435 83.6 2.3e-16
CCDS13552.1 SOX18 gene_id:54345|Hs108|chr20 ( 384) 414 80.0 2.5e-15
CCDS5977.1 SOX7 gene_id:83595|Hs108|chr8 ( 388) 408 79.0 5.1e-15
CCDS14772.1 SRY gene_id:6736|Hs108|chrY ( 204) 402 77.8 6.1e-15
CCDS11689.1 SOX9 gene_id:6662|Hs108|chr17 ( 509) 405 78.6 9e-15
CCDS10428.1 SOX8 gene_id:30812|Hs108|chr16 ( 446) 404 78.3 9.1e-15
CCDS1654.1 SOX11 gene_id:6664|Hs108|chr2 ( 441) 400 77.7 1.4e-14
CCDS12995.1 SOX12 gene_id:6666|Hs108|chr20 ( 315) 394 76.6 2.2e-14
CCDS4547.1 SOX4 gene_id:6659|Hs108|chr6 ( 474) 394 76.7 3.1e-14
CCDS13964.1 SOX10 gene_id:6663|Hs108|chr22 ( 466) 391 76.2 4.3e-14
CCDS44299.1 SOX13 gene_id:9580|Hs108|chr1 ( 622) 349 69.2 7.3e-12
CCDS41761.1 SOX5 gene_id:6660|Hs108|chr12 ( 377) 339 67.3 1.6e-11
CCDS58216.1 SOX5 gene_id:6660|Hs108|chr12 ( 642) 339 67.5 2.4e-11
CCDS81672.1 SOX5 gene_id:6660|Hs108|chr12 ( 728) 339 67.5 2.7e-11
CCDS44844.1 SOX5 gene_id:6660|Hs108|chr12 ( 750) 339 67.5 2.7e-11
CCDS58217.1 SOX5 gene_id:6660|Hs108|chr12 ( 753) 339 67.5 2.7e-11
CCDS8699.1 SOX5 gene_id:6660|Hs108|chr12 ( 763) 339 67.5 2.8e-11
>>CCDS3094.1 SOX14 gene_id:8403|Hs108|chr3 (240 aa)
initn: 1655 init1: 1655 opt: 1655 Z-score: 1521.9 bits: 289.0 E(32554): 1.9e-78
Smith-Waterman score: 1655; 100.0% identity (100.0% similar) in 240 aa overlap (1-240:1-240)
10 20 30 40 50 60
pF1KB9 MSKPSDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MSKPSDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 AKRLRAQHMKEHPDYKYRPRRKPKNLLKKDRYVFPLPYLGDTDPLKAAGLPVGASDGLLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 AKRLRAQHMKEHPDYKYRPRRKPKNLLKKDRYVFPLPYLGDTDPLKAAGLPVGASDGLLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 APEKARAFLPPASAPYSLLDPAQFSSSAIQKMGEVPHTLATGALPYASTLGYQNGAFGSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 APEKARAFLPPASAPYSLLDPAQFSSSAIQKMGEVPHTLATGALPYASTLGYQNGAFGSL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 SCPSQHTHTHPSPTNPGYVVPCNCTAWSASTLQPPVAYILFPGMTKTGIDPYSSAHATAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 SCPSQHTHTHPSPTNPGYVVPCNCTAWSASTLQPPVAYILFPGMTKTGIDPYSSAHATAM
190 200 210 220 230 240
>>CCDS9473.1 SOX21 gene_id:11166|Hs108|chr13 (276 aa)
initn: 1046 init1: 627 opt: 664 Z-score: 618.5 bits: 122.0 E(32554): 4e-28
Smith-Waterman score: 965; 58.0% identity (73.3% similar) in 281 aa overlap (1-236:1-272)
10 20 30 40 50 60
pF1KB9 MSKPSDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDE
:::: ::.::::::::::::.::::::::::::::::::::::::::::.:.::::.:::
CCDS94 MSKPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
10 20 30 40 50 60
70 80 90 100 110
pF1KB9 AKRLRAQHMKEHPDYKYRPRRKPKNLLKKDRYVFPLPY-LG---DTD-P-LKA-AGLPVG
::::::.:::::::::::::::::.:::::...::.:: :: :.. : ::: ::: .:
CCDS94 AKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKFAFPVPYGLGGVADAEHPALKAGAGLHAG
70 80 90 100 110 120
120 130 140
pF1KB9 ASDGL-----LSAPEKA---------RAFLPPASA-------------PYSLLDPAQFSS
:. :: :. :::: :.:.: ..: :::::: ..
CCDS94 AGGGLVPESLLANPEKAAAAAAAAAARVFFPQSAAAAAAAAAAAAAGSPYSLLDLGS---
130 140 150 160 170
150 160 170 180 190
pF1KB9 SAIQKMGEVPHTLATGALPYASTLGYQN---GAF-GSLSCPSQ-------HTHTHPSPTN
::.:. . ...:::::.::: . ::: :. . . :::.:::: :
CCDS94 ----KMAEISSS--SSGLPYASSLGYPTAGAGAFHGAAAAAAAAAAAAGGHTHSHPSPGN
180 190 200 210 220 230
200 210 220 230 240
pF1KB9 PGYVVPCNCTAWSASTLQPPVAYILFPGMTKTGIDPYSSAHATAM
:::..::::.:: . ::::.::::.::: : .::: .:.
CCDS94 PGYMIPCNCSAWPSPGLQPPLAYILLPGMGKPQLDPYPAAYAAAL
240 250 260 270
>>CCDS3239.1 SOX2 gene_id:6657|Hs108|chr3 (317 aa)
initn: 626 init1: 574 opt: 601 Z-score: 560.2 bits: 111.5 E(32554): 7e-25
Smith-Waterman score: 601; 49.1% identity (69.1% similar) in 220 aa overlap (6-216:39-254)
10 20 30
pF1KB9 MSKPSDHIKRPMNAFMVWSRGQRRKMAQENPKMHN
:..:::::::::::::::::::::::::::
CCDS32 LKPPGPQQTSGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHN
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB9 SEISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPKNLLKKDRYVFP
::::::::::::::::.::::.::::::::: ::::::::::::::: :.:.:::.:..:
CCDS32 SEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDKYTLP
70 80 90 100 110 120
100 110 120 130 140
pF1KB9 LPYLGDTDPLKAAGLPVGASDGL-LSAPEKARAFLPPAS-APYSLLD-----PAQFSSSA
:. :.:. :::. : .. . : . : . ::... : . . .:
CCDS32 GGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQDQLGYPQHPGLNA
130 140 150 160 170 180
150 160 170 180 190 200
pF1KB9 IQKMGEVP-HTLATGALPYASTLGYQNGAFGSLSCPSQHTHTHPSPTNPGYVVPC-NCTA
: : ..:: : : . :. :: :. .. .. . .::... . ..
CCDS32 HGAAQMQPMHRYDVSALQYNSMTSSQTYMNGS---PT-YSMSYSQQGTPGMALGSMGSVV
190 200 210 220 230 240
210 220 230 240
pF1KB9 WSASTLQPPVAYILFPGMTKTGIDPYSSAHATAM
: .. .:::
CCDS32 KSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQHYQSGPVP
250 260 270 280 290 300
>>CCDS9523.1 SOX1 gene_id:6656|Hs108|chr13 (391 aa)
initn: 590 init1: 563 opt: 602 Z-score: 559.8 bits: 111.7 E(32554): 7.4e-25
Smith-Waterman score: 602; 46.5% identity (64.7% similar) in 241 aa overlap (6-239:49-285)
10 20 30
pF1KB9 MSKPSDHIKRPMNAFMVWSRGQRRKMAQENPKMHN
:..:::::::::::::::::::::::::::
CCDS95 PTNLSGPAGAGGGGGGGGGGGGGGGAKANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHN
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB9 SEISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPKNLLKKDRYVFP
::::::::::::..:::::::.::::::::: ::::::::::::::: :.:::::.: .
CCDS95 SEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLLKKDKYSLA
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB9 LPYLGDTDPLKAAGLPVGASDGLLSAPEKARAFLPPASAPYSLLDPAQFSSSAIQKMGEV
:. .:.. .:.. :. .: : : ..: . ....: : :
CCDS95 GGLLAAGAGGGGAAVAMGVGVGVGAAAVGQRLESPGGAAGGGYAHVNGWANGAYP--GSV
140 150 160 170 180 190
160 170 180 190 200
pF1KB9 PHTLATGALPYASTLGY--QNGAFGSL-----SCPSQHTHTHPSPTNPGYVVPCNCTAWS
. :..:. . :.: . :: :. . : : : : : :: . . : .
CCDS95 AAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHPH-HPHAHPHNPQPMHRYDMGALQ
200 210 220 230 240 250
210 220 230 240
pF1KB9 ASTLQPPVAYILFPGMTKTGIDPYSSAHATAM
: .. .:. :. ::..: :.:
CCDS95 YSPISNSQGYMSASPSGYGGL-PYGAAAAAAAAAGGAHQNSAVAAAAAAAAASSGALGAL
260 270 280 290 300 310
CCDS95 GSLVKSEPSGSPPAPAHSRAPCPGDLREMISMYLPAGEGGDPAAAAAAAAQSRLHSLPQH
320 330 340 350 360 370
>>CCDS14669.1 SOX3 gene_id:6658|Hs108|chrX (446 aa)
initn: 541 init1: 541 opt: 555 Z-score: 516.2 bits: 103.8 E(32554): 2e-22
Smith-Waterman score: 555; 45.6% identity (67.3% similar) in 217 aa overlap (6-215:137-352)
10 20 30
pF1KB9 MSKPSDHIKRPMNAFMVWSRGQRRKMAQENPKMHN
:..::::::::::::::::::: :::::::
CCDS14 GKSSANAAGGANSGGGSSGGASGGGGGTDQDRVKRPMNAFMVWSRGQRRKMALENPKMHN
110 120 130 140 150 160
40 50 60 70 80 90
pF1KB9 SEISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPKNLLKKDRYVFP
:::::::::.::::..:::::.::::::::: ::::.:::::::::: :.:::::.: .:
CCDS14 SEISKRLGADWKLLTDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDKYSLP
170 180 190 200 210 220
100 110 120 130 140 150
pF1KB9 LPYL--GDTDPLKAAGLPVGASDGLLSAPEKARAFLPP---ASAPYSLLDPAQFSSSAIQ
: : . ::. ..:... ... .. .. :.. :::.. :.. .
CCDS14 SGLLPPGAAAAAAAAAAAAAAASSPVGVGQRLDTYTHVNGWANGAYSLVQE-QLGYAQPP
230 240 250 260 270 280
160 170 180 190 200
pF1KB9 KMGEVPHTLATGALPYASTLGYQNGAFGSLSCPSQHTHTHPSPTNPGY--VVPCNCTAWS
.:. : : . . : : . . . : . . . . :: ..: .: .
CCDS14 SMSSPPPPPALPPMHRYDMAGLQYSPMMPPGAQSYMNVAAAAAAASGYGGMAPSATAAAA
290 300 310 320 330 340
210 220 230 240
pF1KB9 ASTLQPPVAYILFPGMTKTGIDPYSSAHATAM
:. : :
CCDS14 AAYGQQPATAAAAAAAAAAMSLGPMGSVVKSEPSSPPPAIASHSQRACLGDLRDMISMYL
350 360 370 380 390 400
>>CCDS32549.1 SOX15 gene_id:6665|Hs108|chr17 (233 aa)
initn: 465 init1: 445 opt: 474 Z-score: 446.5 bits: 90.0 E(32554): 1.5e-18
Smith-Waterman score: 474; 48.1% identity (71.2% similar) in 156 aa overlap (4-159:45-192)
10 20 30
pF1KB9 MSKPSDHIKRPMNAFMVWSRGQRRKMAQENPKM
: ...::::::::::: .:::.:::.::::
CCDS32 EPPAATAAASSSSGPQEREGAGSPAAPGTLPLEKVKRPMNAFMVWSSAQRRQMAQQNPKM
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB9 HNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPKNLLKKDRYV
:::::::::::.::::.: ::::...:::::::.:....:::::::::: :. .
CCDS32 HNSEISKRLGAQWKLLDEDEKRPFVEEAKRLRARHLRDYPDYKYRPRRKAKS-----SGA
80 90 100 110 120
100 110 120 130 140 150
pF1KB9 FPLPYLGDTDPLKAAGLPVGASDGLLSAPEKARAFLPPASAPYSLLDPAQFSSSAIQKMG
: :. :.: :. . . : .. .. ::. . : :....:: . .
CCDS32 GP-SRCGQGRGNLASGGPLWGPGYATTQPSRGFGYRPPSYSTAYL--PGSYGSSHCKLEA
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB9 EVPHTLATGALPYASTLGYQNGAFGSLSCPSQHTHTHPSPTNPGYVVPCNCTAWSASTLQ
: .:
CCDS32 PSPCSLPQSDPRLQGELLPTYTHYLPPGSPTPYNPPLAGAPMPLTHL
190 200 210 220 230
>>CCDS6159.1 SOX17 gene_id:64321|Hs108|chr8 (414 aa)
initn: 409 init1: 388 opt: 435 Z-score: 407.3 bits: 83.6 E(32554): 2.3e-16
Smith-Waterman score: 435; 37.7% identity (60.3% similar) in 247 aa overlap (2-236:62-294)
10 20 30
pF1KB9 MSKPSDHIKRPMNAFMVWSRGQRRKMAQENP
.: ..:.:::::::::.. .:...::.::
CCDS61 WAESLSPIGDMKVKGEAPANSGAPAGAAGRAKGESRIRRPMNAFMVWAKDERKRLAQQNP
40 50 60 70 80 90
40 50 60 70 80 90
pF1KB9 KMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPKNLLKKDR
.::.:.:: :: :: :. :::::...::.:::.:::..::.:::::::. . .:. .
CCDS61 DLHNAELSKMLGKSWKALTLAEKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQ--VKRLK
100 110 120 130 140
100 110 120 130 140
pF1KB9 YVFPLPYLGDTDPLKAAGLPVG---ASDGL-LSAPEKARAFLPPASAPYSLLDPAQFSS-
: : ..: :: : : : ::: :. ::.. : ::. : :: : . .
CCDS61 RVEGGFLHGLAEPQAAALGPEGGRVAMDGLGLQFPEQG--F--PAGPP--LLPPHMGGHY
150 160 170 180 190 200
150 160 170 180 190 200
pF1KB9 SAIQKMGEVPHTLATGALPYASTL-GYQ-NGAFGSL----SCPSQHTHTHPSPTNPGYVV
:..: : : .: : : . . :: . .::. :... . .. :.
CCDS61 RDCQSLGAPPLDGYPLPTPDTSPLDGVDPDPAFFAAPMPGDCPAAGTYSYAQVSD--YAG
210 220 230 240 250 260
210 220 230 240
pF1KB9 PCNCTAWSAST-LQPPVAYILFPGMTKTGIDPYSSAHATAM
: . : : : : .::. . : :. :
CCDS61 PPEPPAGPMHPRLGPEPAGPSIPGL----LAPPSALHVYYGAMGSPGAGGGRGFQMQPQH
270 280 290 300 310
CCDS61 QHQHQHQHHPPGPGQPSPPPEALPCRDGTDPSQPAELLGEVDRTEFEQYLHFVCKPEMGL
320 330 340 350 360 370
>>CCDS13552.1 SOX18 gene_id:54345|Hs108|chr20 (384 aa)
initn: 434 init1: 367 opt: 414 Z-score: 388.7 bits: 80.0 E(32554): 2.5e-15
Smith-Waterman score: 433; 36.5% identity (59.2% similar) in 260 aa overlap (8-232:85-330)
10 20 30
pF1KB9 MSKPSDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSE
:.:::::::::.. .:...::.:: .::.
CCDS13 QRSPPRSPEPGRYGLSPAGRGERQAADESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAV
60 70 80 90 100 110
40 50 60 70 80 90
pF1KB9 ISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPKNLLKKDRYVFP--
.:: :: :: :. :::::...::.:::.::...::.:::::::: . .: : . :
CCDS13 LSKMLGKAWKELNAAEKRPFVEEAERLRVQHLRDHPNYKYRPRRKKQA--RKARRLEPGL
120 130 140 150 160 170
100 110 120 130
pF1KB9 -LPYLGDT----DPLKAAGL---------PVGAS-DGL-LSAPEKA---------RAFLP
:: :. .:. ::. :.:: ::: : .::.. ::.:
CCDS13 LLPGLAPPQPPPEPFPAASGSARAFRELPPLGAEFDGLGLPTPERSPLDGLEPGEAAFFP
180 190 200 210 220 230
140 150 160 170 180
pF1KB9 PASAPYSL-LDP--AQFSSSAIQK-----MGEVPHTLATGALPYASTLGYQNGAFGSLSC
: .:: . : : : .. . ... .: .: . : . : :. :. . .:.:.
CCDS13 PPAAPEDCALRPFRAPYAPTELSRDPGGCYG-APLAEALRTAPPAAPLA--GLYYGTLGT
240 250 260 270 280
190 200 210 220 230 240
pF1KB9 PSQHTHTHPSPTNPGYVVPCNCTAWSASTLQPPVAYILFPGMTKTGIDPYSSAHATAM
:. .:.: .: .: :: : : : :. . : .: :
CCDS13 PG----PYPGPLSPPPEAP---PLESAEPLGP--AADLWADVDLTEFDQYLNCSRTRPDA
290 300 310 320 330 340
CCDS13 PGLPYHVALAKLGPRAMSCPEESSLISALSDASSAVYYSACISG
350 360 370 380
>>CCDS5977.1 SOX7 gene_id:83595|Hs108|chr8 (388 aa)
initn: 390 init1: 369 opt: 408 Z-score: 383.2 bits: 79.0 E(32554): 5.1e-15
Smith-Waterman score: 408; 40.2% identity (59.8% similar) in 204 aa overlap (8-198:45-240)
10 20 30
pF1KB9 MSKPSDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSE
:.:::::::::.. .:...: .:: .::.:
CCDS59 ECPALDAELSDGQSPPAVPRPPGDKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAE
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB9 ISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMKEHPDYKYRPRRKP--KNLLKKDRYVFP
.:: :: :: :. ..::::.:::.::: :::...:.:::::::: : : :. :
CCDS59 LSKMLGKSWKALTLSQKRPYVDEAERLRLQHMQDYPNYKYRPRRKKQAKRLCKRVDPGFL
80 90 100 110 120 130
100 110 120 130 140
pF1KB9 LPYLG-DTD--PLKAAGLPVGASDGLLSAPEKARAFLPPASAPYSLLD-----PAQFSSS
: :. : . : : .: : : :. : :. :..: :: :: ...
CCDS59 LSSLSRDQNALPEKRSG-----SRGALGEKED-RGEYSPGTALPSLRGCYHEGPAGGGGG
140 150 160 170 180
150 160 170 180 190 200
pF1KB9 AI-QKMGEVPHTLATGALPYASTLGYQNGAFGSLSCPSQHTHTHPS--PTNPGYVVPCNC
. ... :. : : : : : . .: : :. : :: : ::.
CCDS59 GTPSSVDTYPYGLPTP--PEMSPLDVLEPEQTFFSSPCQEEHGHPRRIPHLPGHPYSPEY
190 200 210 220 230 240
210 220 230 240
pF1KB9 TAWSASTLQPPVAYILFPGMTKTGIDPYSSAHATAM
CCDS59 APSPLHCSHPLGSLALGQSPGVSMMSPVPGCPPSPAYYSPATYHPLHSNLQAHLGQLSPP
250 260 270 280 290 300
>>CCDS14772.1 SRY gene_id:6736|Hs108|chrY (204 aa)
initn: 404 init1: 386 opt: 402 Z-score: 381.7 bits: 77.8 E(32554): 6.1e-15
Smith-Waterman score: 402; 62.2% identity (88.9% similar) in 90 aa overlap (6-95:58-146)
10 20 30
pF1KB9 MSKPSDHIKRPMNAFMVWSRGQRRKMAQENPKMHN
:..:::::::.:::: :::::: :::.:.:
CCDS14 LRRSSSFLCTESCNSKYQCETGENSKGNVQDRVKRPMNAFIVWSRDQRRKMALENPRMRN
30 40 50 60 70 80
40 50 60 70 80 90
pF1KB9 SEISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPKNLLKKDRYVFP
:::::.:: .::.:.:::: :...::..:.:.: ...:.:::::::: : .: :. ..:
CCDS14 SEISKQLGYQWKMLTEAEKWPFFQEAQKLQAMHREKYPNYKYRPRRKAK-MLPKNCSLLP
90 100 110 120 130 140
100 110 120 130 140 150
pF1KB9 LPYLGDTDPLKAAGLPVGASDGLLSAPEKARAFLPPASAPYSLLDPAQFSSSAIQKMGEV
CCDS14 ADPASVLCSEVQLDNRLYRDDCTKATHSRMEHQLGHLPPINAASSPQQRDRYSHWTKL
150 160 170 180 190 200
240 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 17:58:01 2016 done: Fri Nov 4 17:58:02 2016
Total Scan time: 2.560 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]