Result of FASTA (omim) for
pF1KB9694
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9694, 252 aa
1>>>pF1KB9694 252 - 252 aa - 252 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.1275+/-0.000335; mu= 4.1930+/- 0.021
mean_var=219.8328+/-44.254, 0's: 0 Z-trim(122.3): 256 B-trim: 127 in 2/58
Lambda= 0.086502
statistics sampled from 39880 (40155) to 39880 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.796), E-opt: 0.2 (0.471), width: 16
Scan time: 7.150
The best scores are: opt bits E(85289)
NP_004089 (OMIM: 269160,600035) homeobox protein E ( 252) 1725 227.0 2.5e-59
NP_001159396 (OMIM: 269160,600035) homeobox protei ( 169) 967 132.2 5.6e-31
NP_004088 (OMIM: 600034) homeobox protein EMX1 [Ho ( 290) 897 123.7 3.5e-28
XP_011530999 (OMIM: 600034) PREDICTED: homeobox pr ( 119) 624 89.3 3.4e-18
XP_005264260 (OMIM: 600034) PREDICTED: homeobox pr ( 280) 584 84.7 2e-16
NP_066305 (OMIM: 604640) T-cell leukemia homeobox ( 291) 315 51.1 2.6e-06
NP_006159 (OMIM: 602563) homeobox protein Nkx-6.1 ( 367) 300 49.3 1.1e-05
NP_005512 (OMIM: 186770) T-cell leukemia homeobox ( 330) 291 48.2 2.2e-05
NP_057254 (OMIM: 604240) T-cell leukemia homeobox ( 284) 287 47.6 2.8e-05
XP_011538046 (OMIM: 186770) PREDICTED: T-cell leuk ( 342) 282 47.1 5e-05
XP_005249788 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 269 45.6 0.00018
XP_005249789 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 269 45.6 0.00018
XP_005249787 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 269 45.6 0.00018
XP_006715778 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 269 45.6 0.00018
NP_109377 (OMIM: 142954) homeobox protein Hox-A3 i ( 443) 269 45.6 0.00018
XP_011513645 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 269 45.6 0.00018
NP_705895 (OMIM: 142954) homeobox protein Hox-A3 i ( 443) 269 45.6 0.00018
NP_796374 (OMIM: 605955) homeobox protein Nkx-6.2 ( 277) 263 44.6 0.00022
NP_036608 (OMIM: 604295) ventral anterior homeobox ( 290) 263 44.6 0.00023
XP_016872278 (OMIM: 605955) PREDICTED: homeobox pr ( 277) 261 44.4 0.00026
NP_001106175 (OMIM: 604294,614402) ventral anterio ( 334) 257 43.9 0.00043
XP_005246570 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 258 44.2 0.00047
NP_008829 (OMIM: 142980) homeobox protein Hox-D3 [ ( 432) 258 44.2 0.00047
XP_005246568 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 258 44.2 0.00047
XP_005246566 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 258 44.2 0.00047
XP_011509368 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 258 44.2 0.00047
XP_006712540 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 258 44.2 0.00047
XP_011509367 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 258 44.2 0.00047
XP_005246567 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 258 44.2 0.00047
NP_663632 (OMIM: 616542) GS homeobox 1 [Homo sapie ( 264) 252 43.2 0.00056
NP_005506 (OMIM: 142994,176450) motor neuron and p ( 401) 255 43.8 0.00058
NP_076920 (OMIM: 142965) homeobox protein Hox-B4 [ ( 251) 249 42.8 0.0007
NP_001158727 (OMIM: 142994,176450) motor neuron an ( 189) 246 42.3 0.00074
NP_001182446 (OMIM: 186770) T-cell leukemia homeob ( 257) 248 42.7 0.00077
NP_002720 (OMIM: 604420) hematopoietically-express ( 270) 248 42.7 0.0008
NP_000200 (OMIM: 125853,260370,600733,606176,60639 ( 283) 248 42.7 0.00083
NP_001417 (OMIM: 131290) homeobox protein engraile ( 392) 250 43.1 0.00087
NP_002440 (OMIM: 123101,168500,168550,604757) home ( 267) 241 41.8 0.0015
XP_011533177 (OMIM: 600297) PREDICTED: homeobox pr ( 321) 242 42.0 0.0015
XP_016868632 (OMIM: 610772) PREDICTED: homeobox pr ( 265) 240 41.7 0.0016
XP_011538047 (OMIM: 186770) PREDICTED: T-cell leuk ( 269) 239 41.6 0.0017
NP_055436 (OMIM: 142981) homeobox protein Hox-D4 [ ( 255) 237 41.3 0.002
XP_016867454 (OMIM: 603354) PREDICTED: homeobox pr ( 203) 235 41.0 0.002
NP_001243268 (OMIM: 602041) homeobox protein Nkx-3 ( 159) 233 40.6 0.002
XP_016867453 (OMIM: 603354) PREDICTED: homeobox pr ( 204) 235 41.0 0.002
NP_005510 (OMIM: 600647) homeobox protein HMX2 [Ho ( 273) 237 41.4 0.0021
XP_005269800 (OMIM: 600647) PREDICTED: homeobox pr ( 273) 237 41.4 0.0021
NP_002136 (OMIM: 142967) homeobox protein Hox-B2 [ ( 356) 239 41.7 0.0021
NP_001091639 (OMIM: 611074) brain-specific homeobo ( 233) 235 41.0 0.0022
NP_001476 (OMIM: 601135) homeobox protein GBX-2 is ( 348) 238 41.6 0.0023
>>NP_004089 (OMIM: 269160,600035) homeobox protein EMX2 (252 aa)
initn: 1725 init1: 1725 opt: 1725 Z-score: 1186.2 bits: 227.0 E(85289): 2.5e-59
Smith-Waterman score: 1725; 100.0% identity (100.0% similar) in 252 aa overlap (1-252:1-252)
10 20 30 40 50 60
pF1KB9 MFQPAPKRCFTIESLVAKDSPLPASRSEDPIRPAALSYANSSPINPFLNGFHSAAAAAAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MFQPAPKRCFTIESLVAKDSPLPASRSEDPIRPAALSYANSSPINPFLNGFHSAAAAAAG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 RGVYSNPDLVFAEAVSHPPNPAVPVHPVPPPHALAAHPLPSSHSPHPLFASQQRDPSTFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 RGVYSNPDLVFAEAVSHPPNPAVPVHPVPPPHALAAHPLPSSHSPHPLFASQQRDPSTFY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 PWLIHRYRYLGHRFQGNDTSPESFLLHNALARKPKRIRTAFSPSQLLRLEHAFEKNHYVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 PWLIHRYRYLGHRFQGNDTSPESFLLHNALARKPKRIRTAFSPSQLLRLEHAFEKNHYVV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 GAERKQLAHSLSLTETQVKVWFQNRRTKFKRQKLEEEGSDSQQKKKGTHHINRWRIATKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 GAERKQLAHSLSLTETQVKVWFQNRRTKFKRQKLEEEGSDSQQKKKGTHHINRWRIATKQ
190 200 210 220 230 240
250
pF1KB9 ASPEEIDVTSDD
::::::::::::
NP_004 ASPEEIDVTSDD
250
>>NP_001159396 (OMIM: 269160,600035) homeobox protein EM (169 aa)
initn: 1060 init1: 967 opt: 967 Z-score: 677.1 bits: 132.2 E(85289): 5.6e-31
Smith-Waterman score: 967; 96.5% identity (97.9% similar) in 142 aa overlap (1-142:1-142)
10 20 30 40 50 60
pF1KB9 MFQPAPKRCFTIESLVAKDSPLPASRSEDPIRPAALSYANSSPINPFLNGFHSAAAAAAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MFQPAPKRCFTIESLVAKDSPLPASRSEDPIRPAALSYANSSPINPFLNGFHSAAAAAAG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 RGVYSNPDLVFAEAVSHPPNPAVPVHPVPPPHALAAHPLPSSHSPHPLFASQQRDPSTFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RGVYSNPDLVFAEAVSHPPNPAVPVHPVPPPHALAAHPLPSSHSPHPLFASQQRDPSTFY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 PWLIHRYRYLGHRFQGNDTSPESFLLHNALARKPKRIRTAFSPSQLLRLEHAFEKNHYVV
::::::::::::::::.. :
NP_001 PWLIHRYRYLGHRFQGKSMVSEPKNKVQKAEAGGRRLRFATKEKRDAPY
130 140 150 160
>>NP_004088 (OMIM: 600034) homeobox protein EMX1 [Homo s (290 aa)
initn: 940 init1: 664 opt: 897 Z-score: 627.0 bits: 123.7 E(85289): 3.5e-28
Smith-Waterman score: 1043; 62.9% identity (80.9% similar) in 267 aa overlap (1-252:34-290)
10 20
pF1KB9 MFQPAPKRCFTIESLVAKDSP---------
::::: :: ::::::::::.
NP_004 AGCTPRKAAAPGRGALPRARLPRTAPAAATMFQPAAKRGFTIESLVAKDGGTGGGTGGGG
10 20 30 40 50 60
30 40 50 60 70
pF1KB9 -----LPASRSEDPIRPAALSYANSSPINP-FLNGFHSAAAAAAGRGVYSNPDLVFAEAV
: :. ::.:.::.::.: . : . :..:: .::::.:::..:..:.::: ::.
NP_004 AGSHLLAAAASEEPLRPTALNYPHPSAAEAAFVSGFPAAAAAGAGRSLYGGPELVFPEAM
70 80 90 100 110 120
80 90 100 110 120 130
pF1KB9 SHPPNPAVPVHPVPPPHALAAHPLPSSHSPHPLFASQQRDPSTFYPWLIHRYRYLGHRFQ
.:: :. :::. : :.: :: . :: .:..:.::: ::::.. : :..:::::
NP_004 NHP---ALTVHPA---HQLGASPL---QPPHSFFGAQHRDPLHFYPWVL-RNRFFGHRFQ
130 140 150 160 170
140 150 160 170 180 190
pF1KB9 GNDTSPESFLLHNALARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTE
..:. ...:::. .::::::::::::::::::::.::::::::::::::::: ::::.:
NP_004 ASDVPQDGLLLHGPFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSE
180 190 200 210 220 230
200 210 220 230 240 250
pF1KB9 TQVKVWFQNRRTKFKRQKLEEEGSDSQQKKKGTHHINRWRIATKQASPEEIDVTSDD
:::::::::::::.::::::::: .:.:::::.:::::::::::::. :.:::::.:
NP_004 TQVKVWFQNRRTKYKRQKLEEEGPESEQKKKGSHHINRWRIATKQANGEDIDVTSND
240 250 260 270 280 290
>>XP_011530999 (OMIM: 600034) PREDICTED: homeobox protei (119 aa)
initn: 632 init1: 614 opt: 624 Z-score: 447.7 bits: 89.3 E(85289): 3.4e-18
Smith-Waterman score: 624; 81.0% identity (94.8% similar) in 116 aa overlap (137-252:4-119)
110 120 130 140 150 160
pF1KB9 PLFASQQRDPSTFYPWLIHRYRYLGHRFQGNDTSPESFLLHNALARKPKRIRTAFSPSQL
.:. ...:::. .::::::::::::::::
XP_011 MVASDVPQDGLLLHGPFARKPKRIRTAFSPSQL
10 20 30
170 180 190 200 210 220
pF1KB9 LRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQKLEEEGSDSQQKKK
::::.::::::::::::::::: ::::.::::::::::::::.::::::::: .:.::::
XP_011 LRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKRQKLEEEGPESEQKKK
40 50 60 70 80 90
230 240 250
pF1KB9 GTHHINRWRIATKQASPEEIDVTSDD
:.:::::::::::::. :.:::::.:
XP_011 GSHHINRWRIATKQANGEDIDVTSND
100 110
>>XP_005264260 (OMIM: 600034) PREDICTED: homeobox protei (280 aa)
initn: 670 init1: 351 opt: 584 Z-score: 416.0 bits: 84.7 E(85289): 2e-16
Smith-Waterman score: 730; 57.5% identity (77.1% similar) in 214 aa overlap (1-199:34-237)
10 20
pF1KB9 MFQPAPKRCFTIESLVAKDSP---------
::::: :: ::::::::::.
XP_005 AGCTPRKAAAPGRGALPRARLPRTAPAAATMFQPAAKRGFTIESLVAKDGGTGGGTGGGG
10 20 30 40 50 60
30 40 50 60 70
pF1KB9 -----LPASRSEDPIRPAALSYANSSPINP-FLNGFHSAAAAAAGRGVYSNPDLVFAEAV
: :. ::.:.::.::.: . : . :..:: .::::.:::..:..:.::: ::.
XP_005 AGSHLLAAAASEEPLRPTALNYPHPSAAEAAFVSGFPAAAAAGAGRSLYGGPELVFPEAM
70 80 90 100 110 120
80 90 100 110 120 130
pF1KB9 SHPPNPAVPVHPVPPPHALAAHPLPSSHSPHPLFASQQRDPSTFYPWLIHRYRYLGHRFQ
.: ::. :::. : :.: :: . :: .:..:.::: ::::.. : :..:::::
XP_005 NH---PALTVHPA---HQLGASPL---QPPHSFFGAQHRDPLHFYPWVL-RNRFFGHRFQ
130 140 150 160 170
140 150 160 170 180 190
pF1KB9 GNDTSPESFLLHNALARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTE
..:. ...:::. .::::::::::::::::::::.::::::::::::::::: ::::.:
XP_005 ASDVPQDGLLLHGPFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSE
180 190 200 210 220 230
200 210 220 230 240 250
pF1KB9 TQVKVWFQNRRTKFKRQKLEEEGSDSQQKKKGTHHINRWRIATKQASPEEIDVTSDD
:::.
XP_005 TQVRRVGVGLSDPQPSCCPGGGFQSLRAGRLPELREAGSAVSQLPPG
240 250 260 270 280
>>NP_066305 (OMIM: 604640) T-cell leukemia homeobox prot (291 aa)
initn: 287 init1: 235 opt: 315 Z-score: 234.4 bits: 51.1 E(85289): 2.6e-06
Smith-Waterman score: 315; 31.6% identity (57.3% similar) in 234 aa overlap (4-226:10-238)
10 20 30 40 50
pF1KB9 MFQPAPKR--CFTIESLVAKDSPLPASRSEDPIRPAALSYANSSPINPFLNGFH
: :.. : :.... .:: : . : : . :: .. : . .
NP_066 MEAPASAQTPHPHEPISFGIDQIL--NSPDQDS-APAPRGPDGASYLGGPPGGRPGATYP
10 20 30 40 50
60 70 80 90 100 110
pF1KB9 SAAAAAAGRGVYSNPDLVFAEAVSHPPNPA--VPVHPVPPPHALAAHPLPSSHSPHPLFA
: :. :: :. . .. .: : . ::.: : : :. ::::. :
NP_066 SLPASFAGLGAPFEDAGSYSVNLSLAPAGVIRVPAHR-PLPGAVPP-PLPSALPAMPSVP
60 70 80 90 100 110
120 130 140 150 160
pF1KB9 SQQRDPSTFYPWLIHRYRYLGHRFQGNDT-SPESF---LLHNALARKP---KRIRTAFSP
. . . .::. :.. :: . . .: . . : : : :. ::.::
NP_066 TVSSLGGLNFPWMESSRRFVKDRFTAAAALTPFTVTRRIGHPYQNRTPPKRKKPRTSFSR
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB9 SQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQKLEEEGSDSQQ
:. .::. :....:...::: ::.::..:..:::.::::::::..:: ::. .. ::
NP_066 VQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQ
180 190 200 210 220 230
230 240 250
pF1KB9 KKKGTHHINRWRIATKQASPEEIDVTSDD
..
NP_066 ASRLMLQLQHDAFQKSLNDSIQPDPLCLHNSSLFALQNLQPWEEDSSKVPAVTSLV
240 250 260 270 280 290
>>NP_006159 (OMIM: 602563) homeobox protein Nkx-6.1 [Hom (367 aa)
initn: 269 init1: 231 opt: 300 Z-score: 223.0 bits: 49.3 E(85289): 1.1e-05
Smith-Waterman score: 301; 30.7% identity (60.6% similar) in 254 aa overlap (12-252:98-336)
10 20 30 40
pF1KB9 MFQPAPKRCFTIESLVAKDS-PLPASRSEDPIRPAALSYAN
:...... : :. .. . :.. : ..
NP_006 NPGGLKPPATGGLSSLGSPPQQLSAATPHGINDILSRPSMPVASGAALPSASPSGSSSSS
70 80 90 100 110 120
50 60 70 80 90
pF1KB9 SSPINPFLNGFHSAAAAAAGRGVYSNPDLVFA-----EAVSHPPNPAVPVHPVPPPHALA
:: . .. .::::::. .. :.: ..: ..: :: : .. : :.:
NP_006 SSSASAS-SASAAAAAAAAAAAAASSPAGLLAGLPRFSSLSPPPPPP-GLYFSPSAAAVA
130 140 150 160 170 180
100 110 120 130 140 150
pF1KB9 AHPLPSSHSPHPLFASQQRDPSTFYPWLIHRYRYLGHRFQGNDTSPE--SFLLHNALARK
: .. :.:: : : :.: ... . :. .:. :.:: . ::
NP_006 A----VGRYPKPLAELPGRTP-IFWPGVMQSPPWRDARLA---CTPHQGSILLDKDGKRK
190 200 210 220 230
160 170 180 190 200 210
pF1KB9 PKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQK
. : .:: .:.. ::..::...:..: :: .::.::..::.::::::::::::.....
NP_006 --HTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKH
240 250 260 270 280 290
220 230 240 250
pF1KB9 LEEEGSDSQQKKKGTHHINRWRIATKQASPEE-----IDVTSDD
: .. ::: . .: . :... .. .: .:::
NP_006 AAEMAT---AKKKQDSETERLKGASENEEEDDDYNKPLDPNSDDEKITQLLKKHKSSSGG
300 310 320 330 340 350
NP_006 GGGLLLHASEPESSS
360
>>NP_005512 (OMIM: 186770) T-cell leukemia homeobox prot (330 aa)
initn: 306 init1: 217 opt: 291 Z-score: 217.5 bits: 48.2 E(85289): 2.2e-05
Smith-Waterman score: 292; 30.8% identity (59.6% similar) in 198 aa overlap (50-247:112-294)
20 30 40 50 60 70
pF1KB9 SPLPASRSEDPIRPAALSYANSSPINPFLNGFHSAAAAAAGRGVYSNPDLVFAEAVSHPP
: .......: :. : .. . : : :
NP_005 PGGPAGGGGACSMGPLTGSYNVNMALAGGPGPGGGGGSSGGAGALSAAGVIRVPA--HRP
90 100 110 120 130
80 90 100 110 120 130
pF1KB9 NPAVPVHPVPPPHALAAHPLPSSHSPHPLFASQQRDPSTFYPWLIHRYRYLGHRFQGNDT
.. .:: : : ::. : : . . . . .::. :: :: :.
NP_005 LAGAVAHPQP-----LATGLPTVPSV-PAMPGVNNLTGLTFPWMESNRRYTKDRFTGH--
140 150 160 170 180 190
140 150 160 170 180 190
pF1KB9 SPESFLLHNALARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVK
: .: : :. ::.:. :. .::. :....:...::: ::..:..:..:::
NP_005 -P----YQNRTPPKKKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVK
200 210 220 230 240
200 210 220 230 240 250
pF1KB9 VWFQNRRTKFKRQKLEEEGSDSQQKKKGTHHINRWRIATKQASPEEIDVTSDD
.::::::::..:: ::. .. :: .. .... . . :.: :
NP_005 TWFQNRRTKWRRQTAEEREAERQQANRILLQLQQEAFQKSLAQPLPADPLCVHNSSLFAL
250 260 270 280 290 300
NP_005 QNLQPWSDDSTKITSVTSVASACE
310 320 330
>>NP_057254 (OMIM: 604240) T-cell leukemia homeobox prot (284 aa)
initn: 267 init1: 226 opt: 287 Z-score: 215.6 bits: 47.6 E(85289): 2.8e-05
Smith-Waterman score: 287; 33.2% identity (59.2% similar) in 196 aa overlap (47-233:50-236)
20 30 40 50 60 70
pF1KB9 AKDSPLPASRSEDPIRPAALSYANSSPINPFLNGFHSAAAAAAGRGVYSNPDLVFAEAVS
: .:.:.:.. . . .. : . .:.
NP_057 GIDQILSGPETPGGGLGLGRGGQGHGENGAFSGGYHGASGYGPAGSLAPLPG---SSGVG
20 30 40 50 60 70
80 90 100 110 120 130
pF1KB9 HPPNPAVPVH---PVPPPHALAAHPLPSSHSPHPLFASQQRDPSTFYPWLIHRYRYLGHR
::.: ::::: . : :. .: : .. :: ::. :. :
NP_057 PGGVIRVPAHRPLPVPPPAGGA----PAVPGPSGLGGAGGLAGLTF-PWMDSGRRFAKDR
80 90 100 110 120 130
140 150 160 170 180
pF1KB9 FQGNDTSPES---FLLHNALARKP---KRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQL
. . :: : . : : : :. ::.:: ::.:.::. : ...:...::: :
NP_057 LTAA-LSPFSGTRRIGHPYQNRTPPKRKKPRTSFSRSQVLELERRFLRQKYLASAERAAL
140 150 160 170 180 190
190 200 210 220 230 240
pF1KB9 AHSLSLTETQVKVWFQNRRTKFKRQKLEEEGSDSQQKKKGTHHINRWRIATKQASPEEID
:..: .:..:::.::::::::..:: ::. .. .. . :...
NP_057 AKALRMTDAQVKTWFQNRRTKWRRQTAEEREAERHRAGRLLLHLQQDALPRPLRPPLPPD
200 210 220 230 240 250
250
pF1KB9 VTSDD
NP_057 PLCLHNSSLFALQNLQPWAEDNKVASVSGLASVV
260 270 280
>>XP_011538046 (OMIM: 186770) PREDICTED: T-cell leukemia (342 aa)
initn: 322 init1: 217 opt: 282 Z-score: 211.3 bits: 47.1 E(85289): 5e-05
Smith-Waterman score: 282; 30.4% identity (58.3% similar) in 204 aa overlap (50-247:112-306)
20 30 40 50 60 70
pF1KB9 SPLPASRSEDPIRPAALSYANSSPINPFLNGFHSAAAAAAGRGVYSNPDLVFAEAVSHPP
: .......: :. : .. . : : :
XP_011 PGGPAGGGGACSMGPLTGSYNVNMALAGGPGPGGGGGSSGGAGALSAAGVIRVPA--HRP
90 100 110 120 130
80 90 100 110 120 130
pF1KB9 NPAVPVHPVPPPHALAAHPLPSSHSPHPLFASQQRDPSTFYPWLIHRYRYLGHRFQGNDT
.. .:: : : ::. : : . . . . .::. :: ::
XP_011 LAGAVAHPQP-----LATGLPTVPSV-PAMPGVNNLTGLTFPWMESNRRYTKDRFT-VAL
140 150 160 170 180 190
140 150 160 170 180 190
pF1KB9 SPESF---LLHNALARKP---KRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSL
:: . . : : : :. ::.:. :. .::. :....:...::: ::..:..
XP_011 SPFTVTRRIGHPYQNRTPPKKKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKM
200 210 220 230 240 250
200 210 220 230 240 250
pF1KB9 TETQVKVWFQNRRTKFKRQKLEEEGSDSQQKKKGTHHINRWRIATKQASPEEIDVTSDD
:..:::.::::::::..:: ::. .. :: .. .... . . :.: :
XP_011 TDAQVKTWFQNRRTKWRRQTAEEREAERQQANRILLQLQQEAFQKSLAQPLPADPLCVHN
260 270 280 290 300 310
XP_011 SSLFALQNLQPWSDDSTKITSVTSVASACE
320 330 340
252 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 18:22:40 2016 done: Fri Nov 4 18:22:41 2016
Total Scan time: 7.150 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]