Result of FASTA (omim) for
pF1KB9696
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9696, 265 aa
1>>>pF1KB9696 265 - 265 aa - 265 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.2457+/-0.000415; mu= -6.6332+/- 0.026
mean_var=594.3923+/-121.546, 0's: 0 Z-trim(127.0): 100 B-trim: 916 in 1/61
Lambda= 0.052606
statistics sampled from 54059 (54204) to 54059 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.855), E-opt: 0.2 (0.636), width: 16
Scan time: 8.390
The best scores are: opt bits E(85289)
NP_001795 (OMIM: 600746) homeobox protein CDX-1 [H ( 265) 1881 156.1 6.2e-38
XP_011533177 (OMIM: 600297) PREDICTED: homeobox pr ( 321) 629 61.2 2.8e-09
NP_001256 (OMIM: 600297) homeobox protein CDX-2 [H ( 313) 594 58.5 1.7e-08
NP_005184 (OMIM: 300025) homeobox protein CDX-4 [H ( 284) 574 56.9 4.7e-08
XP_011533180 (OMIM: 600297) PREDICTED: homeobox pr ( 204) 504 51.4 1.5e-06
XP_011533181 (OMIM: 600297) PREDICTED: homeobox pr ( 196) 492 50.5 2.8e-06
XP_011533178 (OMIM: 600297) PREDICTED: homeobox pr ( 281) 431 46.1 8.6e-05
XP_011533179 (OMIM: 600297) PREDICTED: homeobox pr ( 273) 400 43.7 0.00043
NP_705897 (OMIM: 142974) homeobox protein Hox-C4 [ ( 264) 371 41.5 0.0019
NP_055435 (OMIM: 142974) homeobox protein Hox-C4 [ ( 264) 371 41.5 0.0019
NP_109377 (OMIM: 142954) homeobox protein Hox-A3 i ( 443) 368 41.6 0.0031
XP_011513645 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 368 41.6 0.0031
XP_005249788 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 368 41.6 0.0031
XP_006715778 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 368 41.6 0.0031
XP_005249787 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 368 41.6 0.0031
NP_705895 (OMIM: 142954) homeobox protein Hox-A3 i ( 443) 368 41.6 0.0031
XP_005249789 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 368 41.6 0.0031
NP_002135 (OMIM: 142968,614744) homeobox protein H ( 301) 352 40.1 0.0057
NP_055436 (OMIM: 142981) homeobox protein Hox-D4 [ ( 255) 343 39.3 0.0083
NP_076920 (OMIM: 142965) homeobox protein Hox-B4 [ ( 251) 340 39.1 0.0096
>>NP_001795 (OMIM: 600746) homeobox protein CDX-1 [Homo (265 aa)
initn: 1881 init1: 1881 opt: 1881 Z-score: 802.0 bits: 156.1 E(85289): 6.2e-38
Smith-Waterman score: 1881; 99.6% identity (99.6% similar) in 265 aa overlap (1-265:1-265)
10 20 30 40 50 60
pF1KB9 MYVGYVLDKDSPVYPGPARPASLGLGPQAYGPPAPPPAPPQYPDFSSYSHVEPAPAPPTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MYVGYVLDKDSPVYPGPARPASLGLGPQAYGPPAPPPAPPQYPDFSSYSHVEPAPAPPTA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 WGAPFPAPKDDWAAAYGPGPAAPAASPASLAFGPPPDFSPVPAPPGPGPGLLAQPLGGPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WGAPFPAPKDDWAAAYGPGPAAPAASPASLAFGPPPDFSPVPAPPGPGPGLLAQPLGGPG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 TPSSPGAQRRTPYEWMRRSVAAGGGGGSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYIT
::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPSSPGAQRPTPYEWMRRSVAAGGGGGSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYIT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 IRRKSELAANLGLTERQVKIWFQNRRAKERKVNKKKQQQQQPPQPPMAHDITATPAGPSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IRRKSELAANLGLTERQVKIWFQNRRAKERKVNKKKQQQQQPPQPPMAHDITATPAGPSL
190 200 210 220 230 240
250 260
pF1KB9 GGLCPSNTSLLATSSPMPVKEEFLP
:::::::::::::::::::::::::
NP_001 GGLCPSNTSLLATSSPMPVKEEFLP
250 260
>>XP_011533177 (OMIM: 600297) PREDICTED: homeobox protei (321 aa)
initn: 592 init1: 528 opt: 629 Z-score: 287.6 bits: 61.2 E(85289): 2.8e-09
Smith-Waterman score: 702; 46.2% identity (61.7% similar) in 303 aa overlap (9-259:9-304)
10 20 30 40 50
pF1KB9 MYVGYVLDKDSPVYPGPARPAS-LGLGPQAYGPPAPPPAPPQYPDFSSY---------SH
:: .::. .: .. :.:.:: . .::::::...: ..
XP_011 MYVSYLLDKDVSMYPSSVRHSGGLNLAPQNF------VSPPQYPDYGGYHVAAAAAAAAN
10 20 30 40 50
60 70 80 90
pF1KB9 VEPAPAPPTAWGAPFPAP-KDDWAAAYGPGPAAPAA----------SPAS-LAFGPPPDF
.. : .: .: : . :: ..:: . :.:: :: :: :::. .... : :.
XP_011 LDSAQSPGPSWPAAYGAPLREDWNG-YAPGGAAAAANAVAHGLNGGSPAAAMGYSSPADY
60 70 80 90 100 110
100 110 120 130 140
pF1KB9 SPVPAP------PGPGP----GLLAQPLGGPGTPS--------SPGAQRRTPYEWMRRSV
: : :. .: ::: :: :. :::.:::. ::::. .
XP_011 HPHHHPHHHPHHPAAAPSCASGLLQTLNPGPPGPAATAAAEQLSPGGQRRNLCEWMRKPA
120 130 140 150 160 170
150 160 170 180 190
pF1KB9 AAGGGG-------GSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGL
. :. .. :::::::::::::::::::::::::::::::::::.::::.:::
XP_011 QQSLGSQALTSPSSTVKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGL
180 190 200 210 220 230
200 210 220 230 240
pF1KB9 TERQVKIWFQNRRAKERKVNKKK---QQQQQPPQPPMAHDITATPA-GPSLGGLCP-SNT
.:::::::::::::::::.:::: :::::::::: : :: . : : .
XP_011 SERQVKIWFQNRRAKERKINKKKLQQQQQQQPPQPPPPPPQPPQPQPGPLRSVPEPLSPV
240 250 260 270 280 290
250 260
pF1KB9 SLLATSSPMPVKEEFLP
: : .: : :
XP_011 SSLQASVPGSVPGVLGPTGGVLNPTVTQ
300 310 320
>>NP_001256 (OMIM: 600297) homeobox protein CDX-2 [Homo (313 aa)
initn: 549 init1: 485 opt: 594 Z-score: 273.4 bits: 58.5 E(85289): 1.7e-08
Smith-Waterman score: 754; 49.6% identity (65.2% similar) in 282 aa overlap (1-238:1-274)
10 20 30 40 50
pF1KB9 MYVGYVLDKDSPVYPGPARPAS-LGLGPQAYGPPAPPPAPPQYPDFSSY---------SH
:::.:.:::: .::. .: .. :.:.:: . .::::::...: ..
NP_001 MYVSYLLDKDVSMYPSSVRHSGGLNLAPQNF------VSPPQYPDYGGYHVAAAAAAAAN
10 20 30 40 50
60 70 80 90
pF1KB9 VEPAPAPPTAWGAPFPAP-KDDWAAAYGPGPAAPAA----------SPAS-LAFGPPPDF
.. : .: .: : . :: ..:: . :.:: :: :: :::. .... : :.
NP_001 LDSAQSPGPSWPAAYGAPLREDWNG-YAPGGAAAAANAVAHGLNGGSPAAAMGYSSPADY
60 70 80 90 100 110
100 110 120 130 140
pF1KB9 SPVPAP------PGPGP----GLLAQPLGGPGTPS--------SPGAQRRTPYEWMRRSV
: : :. .: ::: :: :. :::.:::. ::::.
NP_001 HPHHHPHHHPHHPAAAPSCASGLLQTLNPGPPGPAATAAAEQLSPGGQRRNLCEWMRKP-
120 130 140 150 160 170
150 160 170 180 190 200
pF1KB9 AAGGGGGSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKI
: . :.. :::::::::::::::::::::::::::::::::::.::::.:::.::::::
NP_001 AQQSLGSQVKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKI
180 190 200 210 220 230
210 220 230 240 250
pF1KB9 WFQNRRAKERKVNKKK---QQQQQPPQPPMAHDITATPA-GPSLGGLCPSNTSLLATSSP
:::::::::::.:::: :::::::::: : ::
NP_001 WFQNRRAKERKINKKKLQQQQQQQPPQPPPPPPQPPQPQPGPLRSVPEPLSPVSSLQASV
240 250 260 270 280 290
260
pF1KB9 MPVKEEFLP
NP_001 SGSVPGVLGPTGGVLNPTVTQ
300 310
>>NP_005184 (OMIM: 300025) homeobox protein CDX-4 [Homo (284 aa)
initn: 606 init1: 394 opt: 574 Z-score: 265.6 bits: 56.9 E(85289): 4.7e-08
Smith-Waterman score: 615; 45.1% identity (66.8% similar) in 244 aa overlap (1-219:1-238)
10 20 30 40 50
pF1KB9 MYVGYVLDKDSPVYPG----PARPASLGLGPQAYG-PPAPPP---APPQYPDFSSYSHVE
:: . .:.:.. .::: :. .. : : . : : : : : . . .: :.
NP_005 MYGSCLLEKEAGMYPGTLMSPGGDGTAGTGGTGGGGSPMPASNFAAAPAFSHYMGYPHM-
10 20 30 40 50
60 70 80 90 100
pF1KB9 PAPAP--PT--AWGAPFPAPKDDWAAAYGPGPA---APA----ASPASLAFGPPPDFSPV
:. : :. .::.:. :..::.. ::. . .:. .:::.. ...::
NP_005 PSMDPHWPSLGVWGSPYSPPREDWSVYPGPSSTMGTVPVNDVTSSPAAFCSTDYSNLGPV
60 70 80 90 100 110
110 120 130 140 150
pF1KB9 PAP------PGPGPGLLAQPLGGPGTPSSPGAQRRTPYEWMRRSVAAGGGGGSGKTRTKD
. :: . : :. .: . :::. .:..:: :::..: . .::::::.
NP_005 GGGTSGSSLPGQAGGSLVPTDAGAAKASSPSRSRHSPYAWMRKTVQV-----TGKTRTKE
120 130 140 150 160 170
160 170 180 190 200 210
pF1KB9 KYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVNKK
::::::::::::::::::: .:::::.::::::.::::.:::::::::::::::::. ::
NP_005 KYRVVYTDHQRLELEKEFHCNRYITIQRKSELAVNLGLSERQVKIWFQNRRAKERKMIKK
180 190 200 210 220 230
220 230 240 250 260
pF1KB9 KQQQQQPPQPPMAHDITATPAGPSLGGLCPSNTSLLATSSPMPVKEEFLP
: .:
NP_005 KISQFENSGGSVQSDSDSISPGELPNTFFTTPSAVRGFQPIEIQQVIVSE
240 250 260 270 280
>>XP_011533180 (OMIM: 600297) PREDICTED: homeobox protei (204 aa)
initn: 497 init1: 497 opt: 504 Z-score: 238.4 bits: 51.4 E(85289): 1.5e-06
Smith-Waterman score: 504; 63.1% identity (73.0% similar) in 141 aa overlap (124-259:47-187)
100 110 120 130 140 150
pF1KB9 PPPDFSPVPAPPGPGPGLLAQPLGGPGTPSSPGAQRRTPYEWMRRSVAAGGGGGSGKTRT
:::.. : : . : . ... ::::
XP_011 YSQLQLYKSKRPLGAVSGHRFLRHCAHARESPGGNAADRGEGHRSASALTSPSSTVKTRT
20 30 40 50 60 70
160 170 180 190 200 210
pF1KB9 KDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVN
:::::::::::::::::::::::::::::::.::::.:::.:::::::::::::::::.:
XP_011 KDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKERKIN
80 90 100 110 120 130
220 230 240 250 260
pF1KB9 KKK---QQQQQPPQPPMAHDITATPA-GPSLGGLCP-SNTSLLATSSPMPVKEEFLP
::: :::::::::: : :: . : : .: : .: : :
XP_011 KKKLQQQQQQQPPQPPPPPPQPPQPQPGPLRSVPEPLSPVSSLQASVPGSVPGVLGPTGG
140 150 160 170 180 190
XP_011 VLNPTVTQ
200
>>XP_011533181 (OMIM: 600297) PREDICTED: homeobox protei (196 aa)
initn: 482 init1: 482 opt: 492 Z-score: 233.7 bits: 50.5 E(85289): 2.8e-06
Smith-Waterman score: 492; 69.7% identity (77.0% similar) in 122 aa overlap (143-259:58-179)
120 130 140 150 160 170
pF1KB9 AQPLGGPGTPSSPGAQRRTPYEWMRRSVAAGGGGGSGKTRTKDKYRVVYTDHQRLELEKE
: ..: :::::::::::::::::::::::
XP_011 PLGAVSGHRFLRHCAHARESPGGNAADRGEGHRSASVKTRTKDKYRVVYTDHQRLELEKE
30 40 50 60 70 80
180 190 200 210 220
pF1KB9 FHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVNKKK---QQQQQPPQPPMAH
::::::::::::.::::.:::.:::::::::::::::::.:::: ::::::::::
XP_011 FHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKERKINKKKLQQQQQQQPPQPPPPP
90 100 110 120 130 140
230 240 250 260
pF1KB9 DITATPA-GPSLGGLCP-SNTSLLATSSPMPVKEEFLP
: :: . : : .: : .: : :
XP_011 PQPPQPQPGPLRSVPEPLSPVSSLQASVPGSVPGVLGPTGGVLNPTVTQ
150 160 170 180 190
>>XP_011533178 (OMIM: 600297) PREDICTED: homeobox protei (281 aa)
initn: 533 init1: 330 opt: 431 Z-score: 207.0 bits: 46.1 E(85289): 8.6e-05
Smith-Waterman score: 504; 42.4% identity (61.2% similar) in 250 aa overlap (9-211:9-248)
10 20 30 40 50
pF1KB9 MYVGYVLDKDSPVYPGPARPAS-LGLGPQAYGPPAPPPAPPQYPDFSSY---------SH
:: .::. .: .. :.:.:: . .::::::...: ..
XP_011 MYVSYLLDKDVSMYPSSVRHSGGLNLAPQNF------VSPPQYPDYGGYHVAAAAAAAAN
10 20 30 40 50
60 70 80 90
pF1KB9 VEPAPAPPTAWGAPFPAP-KDDWAAAYGPGPAAPAA----------SPAS-LAFGPPPDF
.. : .: .: : . :: ..:: . :.:: :: :: :::. .... : :.
XP_011 LDSAQSPGPSWPAAYGAPLREDWNG-YAPGGAAAAANAVAHGLNGGSPAAAMGYSSPADY
60 70 80 90 100 110
100 110 120 130 140
pF1KB9 SPVPAP------PGPGP----GLLAQPLGGPGTPS--------SPGAQRRTPYEWMRRSV
: : :. .: ::: :: :. :::.:::. ::::. .
XP_011 HPHHHPHHHPHHPAAAPSCASGLLQTLNPGPPGPAATAAAEQLSPGGQRRNLCEWMRKPA
120 130 140 150 160 170
150 160 170 180 190
pF1KB9 AAGGGG-------GSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGL
. :. .. :::::::::::::::::::::::::::::::::::.::::.:::
XP_011 QQSLGSQALTSPSSTVKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGL
180 190 200 210 220 230
200 210 220 230 240 250
pF1KB9 TERQVKIWFQNRRAKERKVNKKKQQQQQPPQPPMAHDITATPAGPSLGGLCPSNTSLLAT
.:: .: : : :..:.
XP_011 SER-LKSGF--RTAEQRRGKSTRRSCSSNSSSSHHSRLRRHHSLPSLSQVL
240 250 260 270 280
>>XP_011533179 (OMIM: 600297) PREDICTED: homeobox protei (273 aa)
initn: 614 init1: 287 opt: 400 Z-score: 194.4 bits: 43.7 E(85289): 0.00043
Smith-Waterman score: 560; 45.0% identity (63.7% similar) in 251 aa overlap (1-211:1-240)
10 20 30 40 50
pF1KB9 MYVGYVLDKDSPVYPGPARPAS-LGLGPQAYGPPAPPPAPPQYPDFSSY---------SH
:::.:.:::: .::. .: .. :.:.:: . .::::::...: ..
XP_011 MYVSYLLDKDVSMYPSSVRHSGGLNLAPQNF------VSPPQYPDYGGYHVAAAAAAAAN
10 20 30 40 50
60 70 80 90
pF1KB9 VEPAPAPPTAWGAPFPAP-KDDWAAAYGPGPAAPAA----------SPAS-LAFGPPPDF
.. : .: .: : . :: ..:: . :.:: :: :: :::. .... : :.
XP_011 LDSAQSPGPSWPAAYGAPLREDWNG-YAPGGAAAAANAVAHGLNGGSPAAAMGYSSPADY
60 70 80 90 100 110
100 110 120 130 140
pF1KB9 SPVPAP------PGPGP----GLLAQPLGGPGTPS--------SPGAQRRTPYEWMRRSV
: : :. .: ::: :: :. :::.:::. ::::.
XP_011 HPHHHPHHHPHHPAAAPSCASGLLQTLNPGPPGPAATAAAEQLSPGGQRRNLCEWMRKP-
120 130 140 150 160 170
150 160 170 180 190 200
pF1KB9 AAGGGGGSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKI
: . :.. :::::::::::::::::::::::::::::::::::.::::.:::.:: .:
XP_011 AQQSLGSQVKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSER-LKS
180 190 200 210 220 230
210 220 230 240 250 260
pF1KB9 WFQNRRAKERKVNKKKQQQQQPPQPPMAHDITATPAGPSLGGLCPSNTSLLATSSPMPVK
: : :..:.
XP_011 GF--RTAEQRRGKSTRRSCSSNSSSSHHSRLRRHHSLPSLSQVL
240 250 260 270
>>NP_705897 (OMIM: 142974) homeobox protein Hox-C4 [Homo (264 aa)
initn: 395 init1: 227 opt: 371 Z-score: 182.7 bits: 41.5 E(85289): 0.0019
Smith-Waterman score: 388; 33.9% identity (56.1% similar) in 239 aa overlap (7-239:29-243)
10 20 30
pF1KB9 MYVGYVLDKDSPVYPGPARPASLGLGPQAYGPPAPPPA
. . :: : : .: ... : :: :::
NP_705 MIMSSYLMDSNYIDPKFPPCEEYSQNSYIPEHSPEYYGRTRESGFQHHHQELYPP-PPPR
10 20 30 40 50
40 50 60 70 80 90
pF1KB9 PPQYPDFSSYSHVEPAPAPPTAWGAPFPAPKDDWAAAYGPGPAAPAASPASLAFGPPPDF
: .::. .:: .: .. : .::. :. : .. : .
NP_705 P-SYPE-RQYS-CTSLQGPGNSRG-------------HGPAQAGHHHPEKSQSLCEPAPL
60 70 80 90 100
100 110 120 130 140 150
pF1KB9 SPVPAPPGPGPGLLAQPLGGPGTPSSPGAQRRTPYEWMRR----SVAAGGGGGSGKTRTK
: . : :.:.: .:: .: ::: .... : ::.. .: . .:: :
NP_705 SGASASPSPAPPACSQP--APDHPSSAASKQPIVYPWMKKIHVSTVNPNYNGGEPK----
110 120 130 140 150
160 170 180 190 200 210
pF1KB9 DKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVNK
. :..:: .: :::::::::.::.: ::. :.: .: :.:::.:::::::: : .: ..
NP_705 -RSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHR
160 170 180 190 200 210
220 230 240 250 260
pF1KB9 --KKQQQQQPPQPPMAHDITATPAGPSLGGLCPSNTSLLATSSPMPVKEEFLP
. . .. :: ..:. : :
NP_705 LPNTKVRSAPPAGAAPSTLSAATPGTSEDHSQSATPPEQQRAEDITRL
220 230 240 250 260
>>NP_055435 (OMIM: 142974) homeobox protein Hox-C4 [Homo (264 aa)
initn: 395 init1: 227 opt: 371 Z-score: 182.7 bits: 41.5 E(85289): 0.0019
Smith-Waterman score: 388; 33.9% identity (56.1% similar) in 239 aa overlap (7-239:29-243)
10 20 30
pF1KB9 MYVGYVLDKDSPVYPGPARPASLGLGPQAYGPPAPPPA
. . :: : : .: ... : :: :::
NP_055 MIMSSYLMDSNYIDPKFPPCEEYSQNSYIPEHSPEYYGRTRESGFQHHHQELYPP-PPPR
10 20 30 40 50
40 50 60 70 80 90
pF1KB9 PPQYPDFSSYSHVEPAPAPPTAWGAPFPAPKDDWAAAYGPGPAAPAASPASLAFGPPPDF
: .::. .:: .: .. : .::. :. : .. : .
NP_055 P-SYPE-RQYS-CTSLQGPGNSRG-------------HGPAQAGHHHPEKSQSLCEPAPL
60 70 80 90 100
100 110 120 130 140 150
pF1KB9 SPVPAPPGPGPGLLAQPLGGPGTPSSPGAQRRTPYEWMRR----SVAAGGGGGSGKTRTK
: . : :.:.: .:: .: ::: .... : ::.. .: . .:: :
NP_055 SGASASPSPAPPACSQP--APDHPSSAASKQPIVYPWMKKIHVSTVNPNYNGGEPK----
110 120 130 140 150
160 170 180 190 200 210
pF1KB9 DKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVNK
. :..:: .: :::::::::.::.: ::. :.: .: :.:::.:::::::: : .: ..
NP_055 -RSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHR
160 170 180 190 200 210
220 230 240 250 260
pF1KB9 --KKQQQQQPPQPPMAHDITATPAGPSLGGLCPSNTSLLATSSPMPVKEEFLP
. . .. :: ..:. : :
NP_055 LPNTKVRSAPPAGAAPSTLSAATPGTSEDHSQSATPPEQQRAEDITRL
220 230 240 250 260
265 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 18:23:46 2016 done: Fri Nov 4 18:23:47 2016
Total Scan time: 8.390 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]