FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB9703, 328 aa 1>>>pF1KB9703 328 - 328 aa - 328 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.8758+/-0.000706; mu= 12.8994+/- 0.043 mean_var=189.9635+/-38.059, 0's: 0 Z-trim(117.3): 46 B-trim: 6 in 1/53 Lambda= 0.093055 statistics sampled from 18021 (18067) to 18021 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.838), E-opt: 0.2 (0.555), width: 16 Scan time: 2.710 The best scores are: opt bits E(32554) CCDS7143.1 PTF1A gene_id:256297|Hs108|chr10 ( 328) 2275 316.7 1.6e-86 >>CCDS7143.1 PTF1A gene_id:256297|Hs108|chr10 (328 aa) initn: 2275 init1: 2275 opt: 2275 Z-score: 1666.9 bits: 316.7 E(32554): 1.6e-86 Smith-Waterman score: 2275; 99.7% identity (99.7% similar) in 328 aa overlap (1-328:1-328) 10 20 30 40 50 60 pF1KB9 MDAVLLEHFPGGLDAFPSSYFDEDDFFTDQSSRDPLEDGDELLADEQAEVEFLSHQLHEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 MDAVLLEHFPGGLDAFPSSYFDEDDFFTDQSSRDPLEDGDELLADEQAEVEFLSHQLHEY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB9 CYRDGACLLLQPAPPAAPLALAPPSSGGLGEPDDGGGGGYCCETGAPPGGFPYSPGSPPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 CYRDGACLLLQPAPPAAPLALAPPSSGGLGEPDDGGGGGYCCETGAPPGGFPYSPGSPPS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB9 CLAYPCAGAAVLSPGARLRGLSGAAAAAARRRRRVRSEAELQQLRQAANVRERRRMQSIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 CLAYPCAGAAVLSPGARLRGLSGAAAAAARRRRRVRSEAELQQLRQAANVRERRRMQSIN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB9 DAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELVQADLPLRGGGAGGCGGPGGGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 DAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELVQADLPLRGGGAGGCGGPGGGG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB9 RLGGDSPGSQAQKVIICHRGTRPPSPSDPDYGLPPLAGHSLSWTDEKQLKEQNIIRTAKV :::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: CCDS71 RLGGDSPGSQAQKVIICHRGTRSPSPSDPDYGLPPLAGHSLSWTDEKQLKEQNIIRTAKV 250 260 270 280 290 300 310 320 pF1KB9 WTPEDPRKLNSKSSFNNIENEPPFEFVS :::::::::::::::::::::::::::: CCDS71 WTPEDPRKLNSKSSFNNIENEPPFEFVS 310 320 328 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 01:27:55 2016 done: Sat Nov 5 01:27:55 2016 Total Scan time: 2.710 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]