Result of FASTA (ccds) for
pF1KB9707
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9707, 342 aa
1>>>pF1KB9707 342 - 342 aa - 342 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.5393+/-0.000717; mu= 12.1947+/- 0.043
mean_var=128.2604+/-26.023, 0's: 0 Z-trim(113.8): 76 B-trim: 123 in 1/51
Lambda= 0.113247
statistics sampled from 14372 (14449) to 14372 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.778), E-opt: 0.2 (0.444), width: 16
Scan time: 2.750
The best scores are: opt bits E(32554)
CCDS32995.2 ETV2 gene_id:2116|Hs108|chr19 ( 342) 2492 417.8 6.6e-117
CCDS74341.1 ETV2 gene_id:2116|Hs108|chr19 ( 249) 1803 305.1 4e-83
CCDS77281.1 ETV2 gene_id:2116|Hs108|chr19 ( 155) 748 132.5 2.2e-31
CCDS59230.1 FLI1 gene_id:2313|Hs108|chr11 ( 259) 395 75.0 7.4e-14
CCDS53724.1 ETS1 gene_id:2113|Hs108|chr11 ( 225) 394 74.8 7.5e-14
CCDS81648.1 ETS1 gene_id:2113|Hs108|chr11 ( 354) 395 75.2 9.3e-14
CCDS59231.1 FLI1 gene_id:2313|Hs108|chr11 ( 386) 395 75.2 9.9e-14
CCDS53725.1 FLI1 gene_id:2313|Hs108|chr11 ( 419) 395 75.2 1.1e-13
CCDS58789.1 ERG gene_id:2078|Hs108|chr21 ( 363) 394 75.0 1.1e-13
CCDS46649.1 ERG gene_id:2078|Hs108|chr21 ( 387) 394 75.0 1.1e-13
CCDS44768.1 FLI1 gene_id:2313|Hs108|chr11 ( 452) 395 75.3 1.1e-13
CCDS8475.1 ETS1 gene_id:2113|Hs108|chr11 ( 441) 394 75.1 1.2e-13
CCDS82674.1 ERG gene_id:2078|Hs108|chr21 ( 455) 394 75.1 1.3e-13
CCDS13657.1 ERG gene_id:2078|Hs108|chr21 ( 462) 394 75.1 1.3e-13
CCDS13659.1 ETS2 gene_id:2114|Hs108|chr21 ( 469) 394 75.1 1.3e-13
CCDS13658.1 ERG gene_id:2078|Hs108|chr21 ( 479) 394 75.1 1.3e-13
CCDS44767.1 ETS1 gene_id:2113|Hs108|chr11 ( 485) 394 75.1 1.3e-13
CCDS46648.1 ERG gene_id:2078|Hs108|chr21 ( 486) 394 75.1 1.3e-13
CCDS2428.1 FEV gene_id:54738|Hs108|chr2 ( 238) 374 71.6 7.5e-13
CCDS59292.1 ETV4 gene_id:2118|Hs108|chr17 ( 207) 359 69.1 3.7e-12
CCDS58553.1 ETV4 gene_id:2118|Hs108|chr17 ( 445) 359 69.4 6.5e-12
CCDS11465.1 ETV4 gene_id:2118|Hs108|chr17 ( 484) 359 69.4 6.9e-12
CCDS13575.1 GABPA gene_id:2551|Hs108|chr21 ( 454) 356 68.9 9.3e-12
CCDS55084.1 ETV1 gene_id:2115|Hs108|chr7 ( 374) 348 67.5 2e-11
CCDS33906.1 ETV5 gene_id:2119|Hs108|chr3 ( 510) 350 67.9 2e-11
CCDS55083.1 ETV1 gene_id:2115|Hs108|chr7 ( 419) 348 67.5 2.2e-11
CCDS55085.1 ETV1 gene_id:2115|Hs108|chr7 ( 437) 348 67.6 2.2e-11
CCDS55087.1 ETV1 gene_id:2115|Hs108|chr7 ( 454) 348 67.6 2.3e-11
CCDS55086.1 ETV1 gene_id:2115|Hs108|chr7 ( 459) 348 67.6 2.3e-11
CCDS55088.1 ETV1 gene_id:2115|Hs108|chr7 ( 477) 348 67.6 2.4e-11
>>CCDS32995.2 ETV2 gene_id:2116|Hs108|chr19 (342 aa)
initn: 2492 init1: 2492 opt: 2492 Z-score: 2212.3 bits: 417.8 E(32554): 6.6e-117
Smith-Waterman score: 2492; 100.0% identity (100.0% similar) in 342 aa overlap (1-342:1-342)
10 20 30 40 50 60
pF1KB9 MDLWNWDEASPQEVPPGNKLAGLEGAKLGFCFPDLALQGDTPTATAETCWKGTSSSLASF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MDLWNWDEASPQEVPPGNKLAGLEGAKLGFCFPDLALQGDTPTATAETCWKGTSSSLASF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 PQLDWGSALLHPEVPWGAEPDSQALPWSGDWTDMACTAWDSWSGASQTLGPAPLGPGPIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 PQLDWGSALLHPEVPWGAEPDSQALPWSGDWTDMACTAWDSWSGASQTLGPAPLGPGPIP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 AAGSEGAAGQNCVPVAGEATSWSRAQAAGSNTSWDCSVGPDGDTYWGSGLGGEPRTDCTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 AAGSEGAAGQNCVPVAGEATSWSRAQAAGSNTSWDCSVGPDGDTYWGSGLGGEPRTDCTI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 SWGGPAGPDCTTSWNPGLHAGGTTSLKRYQSSALTVCSEPSPQSDRASLARCPKTNHRGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 SWGGPAGPDCTTSWNPGLHAGGTTSLKRYQSSALTVCSEPSPQSDRASLARCPKTNHRGP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 IQLWQFLLELLHDGARSSCIRWTGNSREFQLCDPKEVARLWGERKRKPGMNYEKLSRGLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 IQLWQFLLELLHDGARSSCIRWTGNSREFQLCDPKEVARLWGERKRKPGMNYEKLSRGLR
250 260 270 280 290 300
310 320 330 340
pF1KB9 YYYRRDIVRKSGGRKYTYRFGGRVPSLAYPDCAGGGRGAETQ
::::::::::::::::::::::::::::::::::::::::::
CCDS32 YYYRRDIVRKSGGRKYTYRFGGRVPSLAYPDCAGGGRGAETQ
310 320 330 340
>>CCDS74341.1 ETV2 gene_id:2116|Hs108|chr19 (249 aa)
initn: 1803 init1: 1803 opt: 1803 Z-score: 1605.7 bits: 305.1 E(32554): 4e-83
Smith-Waterman score: 1803; 100.0% identity (100.0% similar) in 249 aa overlap (94-342:1-249)
70 80 90 100 110 120
pF1KB9 DWGSALLHPEVPWGAEPDSQALPWSGDWTDMACTAWDSWSGASQTLGPAPLGPGPIPAAG
::::::::::::::::::::::::::::::
CCDS74 MACTAWDSWSGASQTLGPAPLGPGPIPAAG
10 20 30
130 140 150 160 170 180
pF1KB9 SEGAAGQNCVPVAGEATSWSRAQAAGSNTSWDCSVGPDGDTYWGSGLGGEPRTDCTISWG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 SEGAAGQNCVPVAGEATSWSRAQAAGSNTSWDCSVGPDGDTYWGSGLGGEPRTDCTISWG
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB9 GPAGPDCTTSWNPGLHAGGTTSLKRYQSSALTVCSEPSPQSDRASLARCPKTNHRGPIQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 GPAGPDCTTSWNPGLHAGGTTSLKRYQSSALTVCSEPSPQSDRASLARCPKTNHRGPIQL
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB9 WQFLLELLHDGARSSCIRWTGNSREFQLCDPKEVARLWGERKRKPGMNYEKLSRGLRYYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 WQFLLELLHDGARSSCIRWTGNSREFQLCDPKEVARLWGERKRKPGMNYEKLSRGLRYYY
160 170 180 190 200 210
310 320 330 340
pF1KB9 RRDIVRKSGGRKYTYRFGGRVPSLAYPDCAGGGRGAETQ
:::::::::::::::::::::::::::::::::::::::
CCDS74 RRDIVRKSGGRKYTYRFGGRVPSLAYPDCAGGGRGAETQ
220 230 240
>>CCDS77281.1 ETV2 gene_id:2116|Hs108|chr19 (155 aa)
initn: 747 init1: 747 opt: 748 Z-score: 676.9 bits: 132.5 E(32554): 2.2e-31
Smith-Waterman score: 748; 96.3% identity (98.2% similar) in 109 aa overlap (234-342:47-155)
210 220 230 240 250 260
pF1KB9 TSLKRYQSSALTVCSEPSPQSDRASLARCPKTNHRGPIQLWQFLLELLHDGARSSCIRWT
.: .:::::::::::::::::::::::::
CCDS77 GNKLAGLEGAKLGFCFPDLALQGDTPTATAETCWKGPIQLWQFLLELLHDGARSSCIRWT
20 30 40 50 60 70
270 280 290 300 310 320
pF1KB9 GNSREFQLCDPKEVARLWGERKRKPGMNYEKLSRGLRYYYRRDIVRKSGGRKYTYRFGGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 GNSREFQLCDPKEVARLWGERKRKPGMNYEKLSRGLRYYYRRDIVRKSGGRKYTYRFGGR
80 90 100 110 120 130
330 340
pF1KB9 VPSLAYPDCAGGGRGAETQ
:::::::::::::::::::
CCDS77 VPSLAYPDCAGGGRGAETQ
140 150
>>CCDS59230.1 FLI1 gene_id:2313|Hs108|chr11 (259 aa)
initn: 411 init1: 373 opt: 395 Z-score: 362.3 bits: 75.0 E(32554): 7.4e-14
Smith-Waterman score: 395; 45.1% identity (70.7% similar) in 133 aa overlap (193-320:36-167)
170 180 190 200 210 220
pF1KB9 DTYWGSGLGGEPRTDCTISWGGPAGPDCTTSWNPGLHAGGTTSLKRYQSSALTVCSEPSP
.:. ....: . : ..... .: :
CCDS59 LLAYNTTSHTDQSSRLSVKEDPSYDSVRRGAWGNNMNSGLNKSPPLGGAQTISKNTEQRP
10 20 30 40 50 60
230 240 250 260 270
pF1KB9 QSDRASLARCPKTNH-----RGPIQLWQFLLELLHDGARSSCIRWTGNSREFQLCDPKEV
: : .. : ... : ::::::::::: :.: .::: : :.. ::.. :: ::
CCDS59 QPDPYQILG-PTSSRLANPGSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEV
70 80 90 100 110 120
280 290 300 310 320 330
pF1KB9 ARLWGERKRKPGMNYEKLSRGLRYYYRRDIVRKSGGRKYTYRFGGRVPSLAYPDCAGGGR
:: ::::: ::.:::.::::.::::: ..:. : :..:.:.:
CCDS59 ARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESS
130 140 150 160 170 180
340
pF1KB9 GAETQ
CCDS59 MYKYPSDISYMPSYHAHQQKVNFVPPHPSSMPVTSSSFFGAASQYWTSPTGGIYPNPNVP
190 200 210 220 230 240
>>CCDS53724.1 ETS1 gene_id:2113|Hs108|chr11 (225 aa)
initn: 415 init1: 394 opt: 394 Z-score: 362.2 bits: 74.8 E(32554): 7.5e-14
Smith-Waterman score: 394; 64.0% identity (82.0% similar) in 89 aa overlap (239-327:117-205)
210 220 230 240 250 260
pF1KB9 YQSSALTVCSEPSPQSDRASLARCPKTNHRGPIQLWQFLLELLHDGARSSCIRWTGNSRE
::::::::::::: : . .: : :::.. :
CCDS53 TFKDYVRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWE
90 100 110 120 130 140
270 280 290 300 310 320
pF1KB9 FQLCDPKEVARLWGERKRKPGMNYEKLSRGLRYYYRRDIVRKSGGRKYTYRFGGRVPSLA
:.: :: :::: ::.:: :: :::::::::::::: ..:..:..:..:.::: . ::
CCDS53 FKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLL
150 160 170 180 190 200
330 340
pF1KB9 YPDCAGGGRGAETQ
CCDS53 GYTPEELHAMLDVKPDADE
210 220
>>CCDS81648.1 ETS1 gene_id:2113|Hs108|chr11 (354 aa)
initn: 417 init1: 394 opt: 395 Z-score: 360.5 bits: 75.2 E(32554): 9.3e-14
Smith-Waterman score: 395; 57.3% identity (76.7% similar) in 103 aa overlap (225-327:234-334)
200 210 220 230 240 250
pF1KB9 NPGLHAGGTTSLKRYQSSALTVCSEPSPQSDRASLARCPKTNHRGPIQLWQFLLELLHDG
: ..: . . ::::::::::::: :
CCDS81 DYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMCMGRTSRGS--GPIQLWQFLLELLTDK
210 220 230 240 250 260
260 270 280 290 300 310
pF1KB9 ARSSCIRWTGNSREFQLCDPKEVARLWGERKRKPGMNYEKLSRGLRYYYRRDIVRKSGGR
. .: : :::.. ::.: :: :::: ::.:: :: :::::::::::::: ..:..:..:.
CCDS81 SCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGK
270 280 290 300 310 320
320 330 340
pF1KB9 KYTYRFGGRVPSLAYPDCAGGGRGAETQ
.:.::: . ::
CCDS81 RYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
330 340 350
>>CCDS59231.1 FLI1 gene_id:2313|Hs108|chr11 (386 aa)
initn: 429 init1: 373 opt: 395 Z-score: 360.0 bits: 75.2 E(32554): 9.9e-14
Smith-Waterman score: 395; 45.1% identity (70.7% similar) in 133 aa overlap (193-320:163-294)
170 180 190 200 210 220
pF1KB9 DTYWGSGLGGEPRTDCTISWGGPAGPDCTTSWNPGLHAGGTTSLKRYQSSALTVCSEPSP
.:. ....: . : ..... .: :
CCDS59 LLAYNTTSHTDQSSRLSVKEDPSYDSVRRGAWGNNMNSGLNKSPPLGGAQTISKNTEQRP
140 150 160 170 180 190
230 240 250 260 270
pF1KB9 QSDRASLARCPKTNH-----RGPIQLWQFLLELLHDGARSSCIRWTGNSREFQLCDPKEV
: : .. : ... : ::::::::::: :.: .::: : :.. ::.. :: ::
CCDS59 QPDPYQILG-PTSSRLANPGSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEV
200 210 220 230 240 250
280 290 300 310 320 330
pF1KB9 ARLWGERKRKPGMNYEKLSRGLRYYYRRDIVRKSGGRKYTYRFGGRVPSLAYPDCAGGGR
:: ::::: ::.:::.::::.::::: ..:. : :..:.:.:
CCDS59 ARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESS
260 270 280 290 300 310
340
pF1KB9 GAETQ
CCDS59 MYKYPSDISYMPSYHAHQQKVNFVPPHPSSMPVTSSSFFGAASQYWTSPTGGIYPNPNVP
320 330 340 350 360 370
>>CCDS53725.1 FLI1 gene_id:2313|Hs108|chr11 (419 aa)
initn: 398 init1: 373 opt: 395 Z-score: 359.5 bits: 75.2 E(32554): 1.1e-13
Smith-Waterman score: 395; 45.1% identity (70.7% similar) in 133 aa overlap (193-320:196-327)
170 180 190 200 210 220
pF1KB9 DTYWGSGLGGEPRTDCTISWGGPAGPDCTTSWNPGLHAGGTTSLKRYQSSALTVCSEPSP
.:. ....: . : ..... .: :
CCDS53 LLAYNTTSHTDQSSRLSVKEDPSYDSVRRGAWGNNMNSGLNKSPPLGGAQTISKNTEQRP
170 180 190 200 210 220
230 240 250 260 270
pF1KB9 QSDRASLARCPKTNH-----RGPIQLWQFLLELLHDGARSSCIRWTGNSREFQLCDPKEV
: : .. : ... : ::::::::::: :.: .::: : :.. ::.. :: ::
CCDS53 QPDPYQILG-PTSSRLANPGSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEV
230 240 250 260 270 280
280 290 300 310 320 330
pF1KB9 ARLWGERKRKPGMNYEKLSRGLRYYYRRDIVRKSGGRKYTYRFGGRVPSLAYPDCAGGGR
:: ::::: ::.:::.::::.::::: ..:. : :..:.:.:
CCDS53 ARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESS
290 300 310 320 330 340
340
pF1KB9 GAETQ
CCDS53 MYKYPSDISYMPSYHAHQQKVNFVPPHPSSMPVTSSSFFGAASQYWTSPTGGIYPNPNVP
350 360 370 380 390 400
>>CCDS58789.1 ERG gene_id:2078|Hs108|chr21 (363 aa)
initn: 395 init1: 373 opt: 394 Z-score: 359.4 bits: 75.0 E(32554): 1.1e-13
Smith-Waterman score: 394; 46.2% identity (65.0% similar) in 143 aa overlap (185-320:135-274)
160 170 180 190 200 210
pF1KB9 DCSVGPDGDTYWGSGLGGEPRTDCTISWGGPAGPDCTTSWNPGLHAGGTTSLKRYQSSAL
: : ..:. :. : . : : :
CCDS58 ETPLPHLTSDDVDKALQNSPRLMHARNTDLPYEPPRRSAWTG--HGHPTPQSKAAQPSPS
110 120 130 140 150 160
220 230 240 250 260
pF1KB9 TV--CSEPSPQSDRASLARCPKTNH-----RGPIQLWQFLLELLHDGARSSCIRWTGNSR
:: . :: : .. : ... : ::::::::::: :.. :::: : :..
CCDS58 TVPKTEDQRPQLDPYQILG-PTSSRLANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNG
170 180 190 200 210 220
270 280 290 300 310 320
pF1KB9 EFQLCDPKEVARLWGERKRKPGMNYEKLSRGLRYYYRRDIVRKSGGRKYTYRFGGRVPSL
::.. :: :::: ::::: ::.:::.::::.::::: ..:. : :..:.:.:
CCDS58 EFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQ
230 240 250 260 270 280
330 340
pF1KB9 AYPDCAGGGRGAETQ
CCDS58 ALQPHPPESSLYKYPSDLPYMGSYHAHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPT
290 300 310 320 330 340
>>CCDS46649.1 ERG gene_id:2078|Hs108|chr21 (387 aa)
initn: 395 init1: 373 opt: 394 Z-score: 359.1 bits: 75.0 E(32554): 1.1e-13
Smith-Waterman score: 394; 46.2% identity (65.0% similar) in 143 aa overlap (185-320:159-298)
160 170 180 190 200 210
pF1KB9 DCSVGPDGDTYWGSGLGGEPRTDCTISWGGPAGPDCTTSWNPGLHAGGTTSLKRYQSSAL
: : ..:. :. : . : : :
CCDS46 ARNTGGAAFIFPNTSVYPEATQRITTRPDLPYEPPRRSAWTG--HGHPTPQSKAAQPSPS
130 140 150 160 170 180
220 230 240 250 260
pF1KB9 TV--CSEPSPQSDRASLARCPKTNH-----RGPIQLWQFLLELLHDGARSSCIRWTGNSR
:: . :: : .. : ... : ::::::::::: :.. :::: : :..
CCDS46 TVPKTEDQRPQLDPYQILG-PTSSRLANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNG
190 200 210 220 230 240
270 280 290 300 310 320
pF1KB9 EFQLCDPKEVARLWGERKRKPGMNYEKLSRGLRYYYRRDIVRKSGGRKYTYRFGGRVPSL
::.. :: :::: ::::: ::.:::.::::.::::: ..:. : :..:.:.:
CCDS46 EFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQ
250 260 270 280 290 300
330 340
pF1KB9 AYPDCAGGGRGAETQ
CCDS46 ALQPHPPESSLYKYPSDLPYMGSYHAHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPT
310 320 330 340 350 360
342 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 18:27:09 2016 done: Fri Nov 4 18:27:10 2016
Total Scan time: 2.750 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]