Result of FASTA (omim) for
pF1KB9707
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9707, 342 aa
1>>>pF1KB9707 342 - 342 aa - 342 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.4288+/-0.000312; mu= 12.7277+/- 0.019
mean_var=130.7671+/-27.354, 0's: 0 Z-trim(120.9): 175 B-trim: 1403 in 2/55
Lambda= 0.112157
statistics sampled from 36532 (36708) to 36532 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.77), E-opt: 0.2 (0.43), width: 16
Scan time: 7.770
The best scores are: opt bits E(85289)
NP_055024 (OMIM: 609358) ETS translocation variant ( 342) 2492 414.0 2.4e-115
XP_005258709 (OMIM: 609358) PREDICTED: ETS translo ( 370) 2327 387.3 2.8e-107
XP_016881961 (OMIM: 609358) PREDICTED: ETS translo ( 343) 2076 346.7 4.4e-95
XP_011524926 (OMIM: 609358) PREDICTED: ETS translo ( 249) 1803 302.4 6.9e-82
NP_001287903 (OMIM: 609358) ETS translocation vari ( 249) 1803 302.4 6.9e-82
NP_001291478 (OMIM: 609358) ETS translocation vari ( 155) 748 131.5 1.2e-30
XP_011541004 (OMIM: 193067) PREDICTED: Friend leuk ( 410) 398 75.2 2.7e-13
NP_001257941 (OMIM: 193067) Friend leukemia integr ( 259) 395 74.6 2.7e-13
NP_001155894 (OMIM: 164720) protein C-ets-1 isofor ( 225) 394 74.3 2.7e-13
NP_001317380 (OMIM: 164720) protein C-ets-1 isofor ( 354) 395 74.7 3.4e-13
NP_001257939 (OMIM: 193067) Friend leukemia integr ( 386) 395 74.7 3.6e-13
XP_016872806 (OMIM: 164720) PREDICTED: protein C-e ( 398) 395 74.7 3.7e-13
XP_011541003 (OMIM: 193067) PREDICTED: Friend leuk ( 419) 395 74.8 3.8e-13
XP_016872895 (OMIM: 193067) PREDICTED: Friend leuk ( 419) 395 74.8 3.8e-13
NP_001161153 (OMIM: 193067) Friend leukemia integr ( 419) 395 74.8 3.8e-13
XP_016872894 (OMIM: 193067) PREDICTED: Friend leuk ( 419) 395 74.8 3.8e-13
NP_001230358 (OMIM: 165080) transcriptional regula ( 363) 394 74.5 3.9e-13
XP_011540953 (OMIM: 164720) PREDICTED: protein C-e ( 432) 395 74.8 3.9e-13
NP_002008 (OMIM: 193067) Friend leukemia integrati ( 452) 395 74.8 4.1e-13
NP_001129627 (OMIM: 165080) transcriptional regula ( 387) 394 74.6 4.1e-13
XP_016872805 (OMIM: 164720) PREDICTED: protein C-e ( 418) 394 74.6 4.3e-13
XP_016883778 (OMIM: 165080) PREDICTED: transcripti ( 428) 394 74.6 4.4e-13
XP_011527788 (OMIM: 165080) PREDICTED: transcripti ( 435) 394 74.6 4.4e-13
NP_005229 (OMIM: 164720) protein C-ets-1 isoform 2 ( 441) 394 74.6 4.5e-13
XP_016872804 (OMIM: 164720) PREDICTED: protein C-e ( 450) 394 74.6 4.5e-13
NP_001317954 (OMIM: 165080) transcriptional regula ( 455) 394 74.6 4.6e-13
XP_016883776 (OMIM: 165080) PREDICTED: transcripti ( 459) 394 74.6 4.6e-13
NP_004440 (OMIM: 165080) transcriptional regulator ( 462) 394 74.6 4.6e-13
XP_005260992 (OMIM: 164740) PREDICTED: protein C-e ( 469) 394 74.6 4.7e-13
XP_016883779 (OMIM: 164740) PREDICTED: protein C-e ( 469) 394 74.6 4.7e-13
NP_005230 (OMIM: 164740) protein C-ets-2 isoform 1 ( 469) 394 74.6 4.7e-13
XP_011540952 (OMIM: 164720) PREDICTED: protein C-e ( 475) 394 74.6 4.7e-13
NP_891548 (OMIM: 165080) transcriptional regulator ( 479) 394 74.6 4.7e-13
XP_016872803 (OMIM: 164720) PREDICTED: protein C-e ( 485) 394 74.6 4.8e-13
NP_001137292 (OMIM: 164720) protein C-ets-1 isofor ( 485) 394 74.6 4.8e-13
NP_001129626 (OMIM: 165080) transcriptional regula ( 486) 394 74.6 4.8e-13
NP_001230357 (OMIM: 165080) transcriptional regula ( 486) 394 74.6 4.8e-13
XP_011540951 (OMIM: 164720) PREDICTED: protein C-e ( 519) 394 74.7 5e-13
NP_001243224 (OMIM: 164740) protein C-ets-2 isofor ( 609) 394 74.7 5.6e-13
NP_059991 (OMIM: 607150) protein FEV [Homo sapiens ( 238) 374 71.1 2.7e-12
NP_001248368 (OMIM: 600711) ETS translocation vari ( 207) 359 68.6 1.3e-11
XP_011522816 (OMIM: 600711) PREDICTED: ETS translo ( 221) 359 68.7 1.4e-11
NP_001248366 (OMIM: 600711) ETS translocation vari ( 445) 359 69.0 2.3e-11
NP_001248367 (OMIM: 600711) ETS translocation vari ( 445) 359 69.0 2.3e-11
NP_001977 (OMIM: 600711) ETS translocation variant ( 484) 359 69.0 2.4e-11
NP_001073143 (OMIM: 600711) ETS translocation vari ( 484) 359 69.0 2.4e-11
XP_005260995 (OMIM: 600609) PREDICTED: GA-binding ( 454) 356 68.5 3.2e-11
XP_011527822 (OMIM: 600609) PREDICTED: GA-binding ( 454) 356 68.5 3.2e-11
NP_002031 (OMIM: 600609) GA-binding protein alpha ( 454) 356 68.5 3.2e-11
XP_016883802 (OMIM: 600609) PREDICTED: GA-binding ( 454) 356 68.5 3.2e-11
>>NP_055024 (OMIM: 609358) ETS translocation variant 2 i (342 aa)
initn: 2492 init1: 2492 opt: 2492 Z-score: 2191.8 bits: 414.0 E(85289): 2.4e-115
Smith-Waterman score: 2492; 100.0% identity (100.0% similar) in 342 aa overlap (1-342:1-342)
10 20 30 40 50 60
pF1KB9 MDLWNWDEASPQEVPPGNKLAGLEGAKLGFCFPDLALQGDTPTATAETCWKGTSSSLASF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MDLWNWDEASPQEVPPGNKLAGLEGAKLGFCFPDLALQGDTPTATAETCWKGTSSSLASF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 PQLDWGSALLHPEVPWGAEPDSQALPWSGDWTDMACTAWDSWSGASQTLGPAPLGPGPIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 PQLDWGSALLHPEVPWGAEPDSQALPWSGDWTDMACTAWDSWSGASQTLGPAPLGPGPIP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 AAGSEGAAGQNCVPVAGEATSWSRAQAAGSNTSWDCSVGPDGDTYWGSGLGGEPRTDCTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 AAGSEGAAGQNCVPVAGEATSWSRAQAAGSNTSWDCSVGPDGDTYWGSGLGGEPRTDCTI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 SWGGPAGPDCTTSWNPGLHAGGTTSLKRYQSSALTVCSEPSPQSDRASLARCPKTNHRGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 SWGGPAGPDCTTSWNPGLHAGGTTSLKRYQSSALTVCSEPSPQSDRASLARCPKTNHRGP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 IQLWQFLLELLHDGARSSCIRWTGNSREFQLCDPKEVARLWGERKRKPGMNYEKLSRGLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 IQLWQFLLELLHDGARSSCIRWTGNSREFQLCDPKEVARLWGERKRKPGMNYEKLSRGLR
250 260 270 280 290 300
310 320 330 340
pF1KB9 YYYRRDIVRKSGGRKYTYRFGGRVPSLAYPDCAGGGRGAETQ
::::::::::::::::::::::::::::::::::::::::::
NP_055 YYYRRDIVRKSGGRKYTYRFGGRVPSLAYPDCAGGGRGAETQ
310 320 330 340
>>XP_005258709 (OMIM: 609358) PREDICTED: ETS translocati (370 aa)
initn: 2327 init1: 2327 opt: 2327 Z-score: 2047.1 bits: 387.3 E(85289): 2.8e-107
Smith-Waterman score: 2426; 92.4% identity (92.4% similar) in 370 aa overlap (1-342:1-370)
10 20 30
pF1KB9 MDLWNWDEASPQEVPPGNKLAGL----------------------------EGAKLGFCF
::::::::::::::::::::::: :::::::::
XP_005 MDLWNWDEASPQEVPPGNKLAGLGRLPRLPQRVWGGCPGGASADPNPLSPAEGAKLGFCF
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB9 PDLALQGDTPTATAETCWKGTSSSLASFPQLDWGSALLHPEVPWGAEPDSQALPWSGDWT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PDLALQGDTPTATAETCWKGTSSSLASFPQLDWGSALLHPEVPWGAEPDSQALPWSGDWT
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB9 DMACTAWDSWSGASQTLGPAPLGPGPIPAAGSEGAAGQNCVPVAGEATSWSRAQAAGSNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DMACTAWDSWSGASQTLGPAPLGPGPIPAAGSEGAAGQNCVPVAGEATSWSRAQAAGSNT
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB9 SWDCSVGPDGDTYWGSGLGGEPRTDCTISWGGPAGPDCTTSWNPGLHAGGTTSLKRYQSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SWDCSVGPDGDTYWGSGLGGEPRTDCTISWGGPAGPDCTTSWNPGLHAGGTTSLKRYQSS
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB9 ALTVCSEPSPQSDRASLARCPKTNHRGPIQLWQFLLELLHDGARSSCIRWTGNSREFQLC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALTVCSEPSPQSDRASLARCPKTNHRGPIQLWQFLLELLHDGARSSCIRWTGNSREFQLC
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB9 DPKEVARLWGERKRKPGMNYEKLSRGLRYYYRRDIVRKSGGRKYTYRFGGRVPSLAYPDC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DPKEVARLWGERKRKPGMNYEKLSRGLRYYYRRDIVRKSGGRKYTYRFGGRVPSLAYPDC
310 320 330 340 350 360
340
pF1KB9 AGGGRGAETQ
::::::::::
XP_005 AGGGRGAETQ
370
>>XP_016881961 (OMIM: 609358) PREDICTED: ETS translocati (343 aa)
initn: 2082 init1: 1923 opt: 2076 Z-score: 1828.0 bits: 346.7 E(85289): 4.4e-95
Smith-Waterman score: 2169; 85.1% identity (85.1% similar) in 370 aa overlap (1-342:1-343)
10 20 30
pF1KB9 MDLWNWDEASPQEVPPGNKLAGL----------------------------EGAKLGFCF
::::::::::::::::::::::: :::::::::
XP_016 MDLWNWDEASPQEVPPGNKLAGLGRLPRLPQRVWGGCPGGASADPNPLSPAEGAKLGFCF
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB9 PDLALQGDTPTATAETCWKGTSSSLASFPQLDWGSALLHPEVPWGAEPDSQALPWSGDWT
::::::::::::::::::: ::::::::::::::
XP_016 PDLALQGDTPTATAETCWK---------------------------EPDSQALPWSGDWT
70 80 90
100 110 120 130 140 150
pF1KB9 DMACTAWDSWSGASQTLGPAPLGPGPIPAAGSEGAAGQNCVPVAGEATSWSRAQAAGSNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DMACTAWDSWSGASQTLGPAPLGPGPIPAAGSEGAAGQNCVPVAGEATSWSRAQAAGSNT
100 110 120 130 140 150
160 170 180 190 200 210
pF1KB9 SWDCSVGPDGDTYWGSGLGGEPRTDCTISWGGPAGPDCTTSWNPGLHAGGTTSLKRYQSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SWDCSVGPDGDTYWGSGLGGEPRTDCTISWGGPAGPDCTTSWNPGLHAGGTTSLKRYQSS
160 170 180 190 200 210
220 230 240 250 260 270
pF1KB9 ALTVCSEPSPQSDRASLARCPKTNHRGPIQLWQFLLELLHDGARSSCIRWTGNSREFQLC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALTVCSEPSPQSDRASLARCPKTNHRGPIQLWQFLLELLHDGARSSCIRWTGNSREFQLC
220 230 240 250 260 270
280 290 300 310 320 330
pF1KB9 DPKEVARLWGERKRKPGMNYEKLSRGLRYYYRRDIVRKSGGRKYTYRFGGRVPSLAYPDC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DPKEVARLWGERKRKPGMNYEKLSRGLRYYYRRDIVRKSGGRKYTYRFGGRVPSLAYPDC
280 290 300 310 320 330
340
pF1KB9 AGGGRGAETQ
::::::::::
XP_016 AGGGRGAETQ
340
>>XP_011524926 (OMIM: 609358) PREDICTED: ETS translocati (249 aa)
initn: 1803 init1: 1803 opt: 1803 Z-score: 1591.1 bits: 302.4 E(85289): 6.9e-82
Smith-Waterman score: 1803; 100.0% identity (100.0% similar) in 249 aa overlap (94-342:1-249)
70 80 90 100 110 120
pF1KB9 DWGSALLHPEVPWGAEPDSQALPWSGDWTDMACTAWDSWSGASQTLGPAPLGPGPIPAAG
::::::::::::::::::::::::::::::
XP_011 MACTAWDSWSGASQTLGPAPLGPGPIPAAG
10 20 30
130 140 150 160 170 180
pF1KB9 SEGAAGQNCVPVAGEATSWSRAQAAGSNTSWDCSVGPDGDTYWGSGLGGEPRTDCTISWG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SEGAAGQNCVPVAGEATSWSRAQAAGSNTSWDCSVGPDGDTYWGSGLGGEPRTDCTISWG
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB9 GPAGPDCTTSWNPGLHAGGTTSLKRYQSSALTVCSEPSPQSDRASLARCPKTNHRGPIQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPAGPDCTTSWNPGLHAGGTTSLKRYQSSALTVCSEPSPQSDRASLARCPKTNHRGPIQL
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB9 WQFLLELLHDGARSSCIRWTGNSREFQLCDPKEVARLWGERKRKPGMNYEKLSRGLRYYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WQFLLELLHDGARSSCIRWTGNSREFQLCDPKEVARLWGERKRKPGMNYEKLSRGLRYYY
160 170 180 190 200 210
310 320 330 340
pF1KB9 RRDIVRKSGGRKYTYRFGGRVPSLAYPDCAGGGRGAETQ
:::::::::::::::::::::::::::::::::::::::
XP_011 RRDIVRKSGGRKYTYRFGGRVPSLAYPDCAGGGRGAETQ
220 230 240
>>NP_001287903 (OMIM: 609358) ETS translocation variant (249 aa)
initn: 1803 init1: 1803 opt: 1803 Z-score: 1591.1 bits: 302.4 E(85289): 6.9e-82
Smith-Waterman score: 1803; 100.0% identity (100.0% similar) in 249 aa overlap (94-342:1-249)
70 80 90 100 110 120
pF1KB9 DWGSALLHPEVPWGAEPDSQALPWSGDWTDMACTAWDSWSGASQTLGPAPLGPGPIPAAG
::::::::::::::::::::::::::::::
NP_001 MACTAWDSWSGASQTLGPAPLGPGPIPAAG
10 20 30
130 140 150 160 170 180
pF1KB9 SEGAAGQNCVPVAGEATSWSRAQAAGSNTSWDCSVGPDGDTYWGSGLGGEPRTDCTISWG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SEGAAGQNCVPVAGEATSWSRAQAAGSNTSWDCSVGPDGDTYWGSGLGGEPRTDCTISWG
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB9 GPAGPDCTTSWNPGLHAGGTTSLKRYQSSALTVCSEPSPQSDRASLARCPKTNHRGPIQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPAGPDCTTSWNPGLHAGGTTSLKRYQSSALTVCSEPSPQSDRASLARCPKTNHRGPIQL
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB9 WQFLLELLHDGARSSCIRWTGNSREFQLCDPKEVARLWGERKRKPGMNYEKLSRGLRYYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WQFLLELLHDGARSSCIRWTGNSREFQLCDPKEVARLWGERKRKPGMNYEKLSRGLRYYY
160 170 180 190 200 210
310 320 330 340
pF1KB9 RRDIVRKSGGRKYTYRFGGRVPSLAYPDCAGGGRGAETQ
:::::::::::::::::::::::::::::::::::::::
NP_001 RRDIVRKSGGRKYTYRFGGRVPSLAYPDCAGGGRGAETQ
220 230 240
>>NP_001291478 (OMIM: 609358) ETS translocation variant (155 aa)
initn: 747 init1: 747 opt: 748 Z-score: 671.2 bits: 131.5 E(85289): 1.2e-30
Smith-Waterman score: 748; 96.3% identity (98.2% similar) in 109 aa overlap (234-342:47-155)
210 220 230 240 250 260
pF1KB9 TSLKRYQSSALTVCSEPSPQSDRASLARCPKTNHRGPIQLWQFLLELLHDGARSSCIRWT
.: .:::::::::::::::::::::::::
NP_001 GNKLAGLEGAKLGFCFPDLALQGDTPTATAETCWKGPIQLWQFLLELLHDGARSSCIRWT
20 30 40 50 60 70
270 280 290 300 310 320
pF1KB9 GNSREFQLCDPKEVARLWGERKRKPGMNYEKLSRGLRYYYRRDIVRKSGGRKYTYRFGGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GNSREFQLCDPKEVARLWGERKRKPGMNYEKLSRGLRYYYRRDIVRKSGGRKYTYRFGGR
80 90 100 110 120 130
330 340
pF1KB9 VPSLAYPDCAGGGRGAETQ
:::::::::::::::::::
NP_001 VPSLAYPDCAGGGRGAETQ
140 150
>--
initn: 331 init1: 331 opt: 331 Z-score: 306.5 bits: 64.0 E(85289): 2.5e-10
Smith-Waterman score: 331; 100.0% identity (100.0% similar) in 46 aa overlap (1-46:1-46)
10 20 30 40 50 60
pF1KB9 MDLWNWDEASPQEVPPGNKLAGLEGAKLGFCFPDLALQGDTPTATAETCWKGTSSSLASF
::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDLWNWDEASPQEVPPGNKLAGLEGAKLGFCFPDLALQGDTPTATAETCWKGPIQLWQFL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 PQLDWGSALLHPEVPWGAEPDSQALPWSGDWTDMACTAWDSWSGASQTLGPAPLGPGPIP
NP_001 LELLHDGARSSCIRWTGNSREFQLCDPKEVARLWGERKRKPGMNYEKLSRGLRYYYRRDI
70 80 90 100 110 120
>>XP_011541004 (OMIM: 193067) PREDICTED: Friend leukemia (410 aa)
initn: 398 init1: 373 opt: 398 Z-score: 359.7 bits: 75.2 E(85289): 2.7e-13
Smith-Waterman score: 398; 54.3% identity (72.4% similar) in 127 aa overlap (198-320:199-318)
170 180 190 200 210 220
pF1KB9 SGLGGEPRTDCTISWGGPAGPDCTTSWNPGLHAGGTTSLKRYQSSALTVCSEP----SPQ
: : .::: . ::: :.: .: .:
XP_011 KMNKEDFLRATTLYNTEVLLSHLSYLRESSLLAYNTTS-HTDQSSRLSVKEDPYQILGPT
170 180 190 200 210 220
230 240 250 260 270 280
pF1KB9 SDRASLARCPKTNHRGPIQLWQFLLELLHDGARSSCIRWTGNSREFQLCDPKEVARLWGE
:.: :: : . : ::::::::::: :.: .::: : :.. ::.. :: :::: :::
XP_011 SSR--LAN-PGS---GQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGE
230 240 250 260 270 280
290 300 310 320 330 340
pF1KB9 RKRKPGMNYEKLSRGLRYYYRRDIVRKSGGRKYTYRFGGRVPSLAYPDCAGGGRGAETQ
:: ::.:::.::::.::::: ..:. : :..:.:.:
XP_011 RKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESSMYKYPS
290 300 310 320 330 340
XP_011 DISYMPSYHAHQQKVNFVPPHPSSMPVTSSSFFGAASQYWTSPTGGIYPNPNVPRHPNTH
350 360 370 380 390 400
>>NP_001257941 (OMIM: 193067) Friend leukemia integratio (259 aa)
initn: 411 init1: 373 opt: 395 Z-score: 359.6 bits: 74.6 E(85289): 2.7e-13
Smith-Waterman score: 395; 45.1% identity (70.7% similar) in 133 aa overlap (193-320:36-167)
170 180 190 200 210 220
pF1KB9 DTYWGSGLGGEPRTDCTISWGGPAGPDCTTSWNPGLHAGGTTSLKRYQSSALTVCSEPSP
.:. ....: . : ..... .: :
NP_001 LLAYNTTSHTDQSSRLSVKEDPSYDSVRRGAWGNNMNSGLNKSPPLGGAQTISKNTEQRP
10 20 30 40 50 60
230 240 250 260 270
pF1KB9 QSDRASLARCPKTNH-----RGPIQLWQFLLELLHDGARSSCIRWTGNSREFQLCDPKEV
: : .. : ... : ::::::::::: :.: .::: : :.. ::.. :: ::
NP_001 QPDPYQILG-PTSSRLANPGSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEV
70 80 90 100 110 120
280 290 300 310 320 330
pF1KB9 ARLWGERKRKPGMNYEKLSRGLRYYYRRDIVRKSGGRKYTYRFGGRVPSLAYPDCAGGGR
:: ::::: ::.:::.::::.::::: ..:. : :..:.:.:
NP_001 ARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESS
130 140 150 160 170 180
340
pF1KB9 GAETQ
NP_001 MYKYPSDISYMPSYHAHQQKVNFVPPHPSSMPVTSSSFFGAASQYWTSPTGGIYPNPNVP
190 200 210 220 230 240
>>NP_001155894 (OMIM: 164720) protein C-ets-1 isoform 3 (225 aa)
initn: 415 init1: 394 opt: 394 Z-score: 359.5 bits: 74.3 E(85289): 2.7e-13
Smith-Waterman score: 394; 64.0% identity (82.0% similar) in 89 aa overlap (239-327:117-205)
210 220 230 240 250 260
pF1KB9 YQSSALTVCSEPSPQSDRASLARCPKTNHRGPIQLWQFLLELLHDGARSSCIRWTGNSRE
::::::::::::: : . .: : :::.. :
NP_001 TFKDYVRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWE
90 100 110 120 130 140
270 280 290 300 310 320
pF1KB9 FQLCDPKEVARLWGERKRKPGMNYEKLSRGLRYYYRRDIVRKSGGRKYTYRFGGRVPSLA
:.: :: :::: ::.:: :: :::::::::::::: ..:..:..:..:.::: . ::
NP_001 FKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLL
150 160 170 180 190 200
330 340
pF1KB9 YPDCAGGGRGAETQ
NP_001 GYTPEELHAMLDVKPDADE
210 220
>>NP_001317380 (OMIM: 164720) protein C-ets-1 isoform 4 (354 aa)
initn: 417 init1: 394 opt: 395 Z-score: 357.9 bits: 74.7 E(85289): 3.4e-13
Smith-Waterman score: 395; 57.3% identity (76.7% similar) in 103 aa overlap (225-327:234-334)
200 210 220 230 240 250
pF1KB9 NPGLHAGGTTSLKRYQSSALTVCSEPSPQSDRASLARCPKTNHRGPIQLWQFLLELLHDG
: ..: . . ::::::::::::: :
NP_001 DYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMCMGRTSRGS--GPIQLWQFLLELLTDK
210 220 230 240 250 260
260 270 280 290 300 310
pF1KB9 ARSSCIRWTGNSREFQLCDPKEVARLWGERKRKPGMNYEKLSRGLRYYYRRDIVRKSGGR
. .: : :::.. ::.: :: :::: ::.:: :: :::::::::::::: ..:..:..:.
NP_001 SCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGK
270 280 290 300 310 320
320 330 340
pF1KB9 KYTYRFGGRVPSLAYPDCAGGGRGAETQ
.:.::: . ::
NP_001 RYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
330 340 350
342 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 18:27:10 2016 done: Fri Nov 4 18:27:11 2016
Total Scan time: 7.770 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]